Prupe.2G017600_v2.0.a1

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0001080
Physical Location & Seq
Forward (+)
1637938 .. 1643818
5881 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G017600.1

Sequence Viewer

Length: 1386 bp
ATGGAAGGATGCACATGGGGTGATTTAGCGGTGCAACAAGCCAGCTCCACCATTGTAACATATTGTGGAGCTCAACTCGTGCTGCCACCTTGGCCATCAAAGTCAAAGAAGTCATGTCTAAACAAAGCCATCGTCGTTGTCATCTTTCCTGTGCCGATTGGTTGTCTTTTGACGCCGCTGTCATTTGGTTGTACAGGGAGGGAAGAAGAAGAAGAAGAAAAAAGGAAACAAAAACTCCATTATCAAAAATACAACAATGGCAAACTGACCCTAAGTTTGAATTCCCTAACCAGCAAAGTCTACGGTGGACCTGGAGCACCGATGCGCCAATTTTTCAAAACTGCCATAGCAGTAACAACGGTGGTTGTTTCTTCATCAAACACAACCAAACAAGTCCTCCGAACACATGACCGATTCTTAAGCCTTCGAAAAATATGCAACTCTCACTTGTTCGCCCCCAAAATCCTTAACGCCAACCAACCCAGCCGTCGCATGAAAGTGGAAGAGCTCATATATGATGTCAATGAAAGCTTGGTCAAAGGTGAGGCGGTAGATATTAGAAAAGCCACTTTCAAAACGACGCTCAATCTGCTTTCCCATACTATGTTCTCTATGGATTTGGTTGACGCAAGTAGCGAGATGGCTAGAGAGTTCAAGGAGATTGTGTGGGGTTCGATGGAAGAGGCACAGAAGCCAAACTGGAAGATAGAACAGGTCTTTGACCGCATCATTATCCAAAGATTGGAATCTAGAAAAGCCCATGATTATGTCATAACCAATGATATGTTGGATACTTTTTTGAACATCAGTGGAGTGAACAGTGAGGACATGGACATGACCAAACTTCAACATCTGCTTTTGATTCTATTTACTGCGGGCACAGATACAACCTCAGCCACGTTGGAATGGGCAATGGCTGAGCTGCTACGCAATCCGAAAAAGCTATCAAAAGCTCAACAAGAGCTAGAGAAAATCATTGGCAAAGGAAAACCAGTAGAGGAAGGAGACATTGCTCGCCCGGGCCGGCCCAGCCCATTGACGAGCCTTATTGCTCGGCTTCCTTACTTCCAAGCAATAATCAAGGAGACCTTTCTACTAGACCCAGCAACTCCATTGCTTCTCCCTCGAAAAGCCGATTCAAACGTTGAAATCTGCCGGTTATATTTTGTGAATGCATGGGCCATCGGCAGAGACCCCAACATTTGGGACAACCCAAGCTCATTTGTTTCTGAGAGGTTCTTAGGATTGGATGACCAAATTGATGTTAGCGGGAAAAACTTTGAGCTTATTCCATTTGGTGCTGGGAGGAGAATATGTCCTGGCTTGCCATGGACGATGCGAATTCTGCCCTTGATGTTGGGTTCACTCATTAACTCTTTTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

462

Amino Acids

51.8

Weight (kDa)

8.63

Isoelectric Point (pI)

37.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 178
AccB7I CCANNNNNTGG 2 cut(s) 742, 1203
AccI GTMKAC 1 cut(s) 300
AciI CCGC 6 cut(s) 29, 176, 548, 724, 875, 1269
AclI AACGTT 1 cut(s) 1143
AcoI YGGCCR 1 cut(s) 92
AcsI RAATTY 2 cut(s) 280, 1341
AcyI GRCGYC 1 cut(s) 173
AfaI GTAC 1 cut(s) 193
AfiI CCNNNNNNNGG 2 cut(s) 742, 1203
AflII CTTAAG 1 cut(s) 418
AgsI TTSAA 9 cut(s) 280, 337, 574, 655, 802, 848, 1140, 1148, 1382
AjnI CCWGG 2 cut(s) 310, 1318
Alw21I GWGCWC 3 cut(s) 73, 319, 510
Alw26I GTCTC 3 cut(s) 999, 1079, 1185
Ama87I CYCGRG 1 cut(s) 1018
AoxI GGCC 4 cut(s) 92, 1021, 1025, 1179
ApeKI GCWGC 2 cut(s) 82, 922
ApoI RAATTY 2 cut(s) 280, 1341
ArsI GACNNNNNNTTYG 4 cut(s) 117, 149, 259, 291
AspLEI GCGC 1 cut(s) 327
AspS9I GGNCC 4 cut(s) 308, 1021, 1026, 1179
AsuC2I CCSGG 2 cut(s) 1019, 1020
AsuHPI GGTGA 2 cut(s) 32, 554
AsuII TTCGAA 1 cut(s) 427
AvaI CYCGRG 1 cut(s) 1018
AvaII GGWCC 1 cut(s) 308
BaeGI GKGCMC 1 cut(s) 881
BalI TGGCCA 1 cut(s) 94
BanII GRGCYC 2 cut(s) 73, 510
BauI CACGAG 1 cut(s) 77
Bbv12I GWGCWC 3 cut(s) 73, 319, 510
BbvCI CCTCAGC 1 cut(s) 892
BbvI GCAGC 2 cut(s) 69, 909
BccI CCATC 5 cut(s) 103, 137, 634, 670, 1190
BceAI ACGGC 1 cut(s) 471
BcgI CGANNNNNNTGC 2 cut(s) 417, 451
BciT130I CCWGG 2 cut(s) 312, 1320
BciVI GTATCC 1 cut(s) 784
BcnI CCSGG 2 cut(s) 1019, 1020
BcoDI GTCTC 3 cut(s) 999, 1079, 1185
BfaI CTAG 4 cut(s) 645, 750, 965, 1097
BfrI CTTAAG 1 cut(s) 418
BfuI GTATCC 1 cut(s) 784
BglI GCCNNNNNGGC 1 cut(s) 91
BisI GCNGC 3 cut(s) 83, 176, 923
BlpI GCTNAGC 1 cut(s) 918
BlsI GCNGC 3 cut(s) 84, 177, 924
Bme1390I CCNGG 4 cut(s) 312, 1019, 1020, 1320
Bme18I GGWCC 1 cut(s) 308
BmeT110I CYCGRG 1 cut(s) 1018
BmgT120I GGNCC 4 cut(s) 308, 1021, 1026, 1179
BmrFI CCNGG 4 cut(s) 312, 1019, 1020, 1320
BmsI GCATC 3 cut(s) 312, 735, 1326
BplI GAGNNNNNCTC 2 cut(s) 60, 92
BpmI CTGGAG 1 cut(s) 333
Bpu10I CCTNAGC 1 cut(s) 892
Bpu1102I GCTNAGC 1 cut(s) 918
Bpu14I TTCGAA 1 cut(s) 427
BpuMI CCSGG 2 cut(s) 1019, 1020
BsaBI GATNNNNATC 1 cut(s) 745
BsaHI GRCGYC 1 cut(s) 173
BsaI GGTCTC 2 cut(s) 1079, 1185
BsaJI CCNNGG 3 cut(s) 89, 1018, 1328
BsaXI ACNNNNNCTCC 8 cut(s) 219, 249, 381, 411, 650, 680, 1300, 1330
Bsc4I CCNNNNNNNGG 2 cut(s) 742, 1203
Bse118I RCCGGY 2 cut(s) 1023, 1155
Bse1I ACTGG 2 cut(s) 704, 992
Bse3DI GCAATG 3 cut(s) 918, 1008, 1112
Bse8I GATNNNNATC 1 cut(s) 745
BseBI CCWGG 2 cut(s) 312, 1320
BseDI CCNNGG 3 cut(s) 89, 1018, 1328
BseGI GGATG 2 cut(s) 14, 1255
BseJI GATNNNNATC 1 cut(s) 745
BseLI CCNNNNNNNGG 2 cut(s) 742, 1203
BseMI GCAATG 3 cut(s) 918, 1008, 1112
BseMII CTCAG 3 cut(s) 906, 909, 1221
BseNI ACTGG 2 cut(s) 704, 992
BseRI GAGGAG 1 cut(s) 1321
BseSI GKGCMC 1 cut(s) 881
BseXI GCAGC 2 cut(s) 69, 909
BseYI CCCAGC 4 cut(s) 482, 1028, 1102, 1301
BshFI GGCC 4 cut(s) 94, 1023, 1027, 1181
BsiHKAI GWGCWC 3 cut(s) 73, 319, 510
BsiHKCI CYCGRG 1 cut(s) 1018
BsiSI CCGG 3 cut(s) 1019, 1024, 1156
BslFI GGGAC 1 cut(s) 1220
BslI CCNNNNNNNGG 2 cut(s) 742, 1203
BsmAI GTCTC 3 cut(s) 999, 1079, 1185
BsmFI GGGAC 1 cut(s) 1220
BsmI GAATGC 1 cut(s) 1177
BsnI GGCC 4 cut(s) 94, 1023, 1027, 1181
Bso31I GGTCTC 2 cut(s) 1079, 1185
BsoBI CYCGRG 1 cut(s) 1018
Bsp119I TTCGAA 1 cut(s) 427
Bsp1286I GDGCHC 4 cut(s) 73, 319, 510, 881
Bsp1407I TGTACA 1 cut(s) 191
Bsp1720I GCTNAGC 1 cut(s) 918
Bsp19I CCATGG 1 cut(s) 1328
BspACI CCGC 6 cut(s) 29, 176, 548, 724, 875, 1269
BspANI GGCC 4 cut(s) 94, 1023, 1027, 1181
BspCNI CTCAG 3 cut(s) 905, 910, 1222
BspQI GCTCTTC 1 cut(s) 498
BspT104I TTCGAA 1 cut(s) 427
BspTI CTTAAG 1 cut(s) 418
BspTNI GGTCTC 2 cut(s) 1079, 1185
BsrDI GCAATG 3 cut(s) 918, 1008, 1112
BsrFI RCCGGY 2 cut(s) 1023, 1155
BsrGI TGTACA 1 cut(s) 191
BsrI ACTGG 2 cut(s) 704, 992
BssAI RCCGGY 2 cut(s) 1023, 1155
BssECI CCNNGG 3 cut(s) 89, 1018, 1328
BssNI GRCGYC 1 cut(s) 173
BssSI CACGAG 1 cut(s) 77
BssT1I CCWWGG 2 cut(s) 89, 1328
Bst2BI CACGAG 1 cut(s) 77
Bst2UI CCWGG 2 cut(s) 312, 1320
Bst4CI ACNGT 3 cut(s) 305, 361, 821
Bst6I CTCTTC 2 cut(s) 498, 675
BstACI GRCGYC 1 cut(s) 173
BstAFI CTTAAG 1 cut(s) 418
BstAUI TGTACA 1 cut(s) 191
BstBI TTCGAA 1 cut(s) 427
BstC8I GCNNGC 5 cut(s) 43, 877, 1015, 1025, 1325
BstDEI CTNAG 5 cut(s) 272, 892, 918, 1230, 1240
BstDSI CCRYGG 1 cut(s) 1328
BstF5I GGATG 2 cut(s) 14, 1255
BstHHI GCGC 1 cut(s) 327
BstMAI GTCTC 3 cut(s) 999, 1079, 1185
BstMWI GCNNNNNNNGC 4 cut(s) 91, 589, 1029, 1345
BstNI CCWGG 2 cut(s) 312, 1320
BstSCI CCNGG 4 cut(s) 310, 1017, 1018, 1318
BstSLI GKGCMC 1 cut(s) 881
BstV1I GCAGC 2 cut(s) 69, 909
BsuI GTATCC 1 cut(s) 784
BsuRI GGCC 4 cut(s) 94, 1023, 1027, 1181
BtgI CCRYGG 1 cut(s) 1328
BtsCI GGATG 2 cut(s) 14, 1255
BtsIMutI CAGTG 2 cut(s) 814, 826
Cac8I GCNNGC 5 cut(s) 43, 877, 1015, 1025, 1325
CfoI GCGC 1 cut(s) 327
Cfr10I RCCGGY 2 cut(s) 1023, 1155
Cfr13I GGNCC 4 cut(s) 308, 1021, 1026, 1179
Cfr9I CCCGGG 1 cut(s) 1018
CseI GACGC 3 cut(s) 181, 589, 635
Csp6I GTAC 1 cut(s) 192
CviAII CATG 9 cut(s) 15, 114, 407, 493, 761, 829, 835, 1176, 1329
CviQI GTAC 1 cut(s) 192
DdeI CTNAG 5 cut(s) 272, 892, 918, 1230, 1240
DrdI GACNNNNNNGTC 1 cut(s) 178
DseDI GACNNNNNNGTC 1 cut(s) 178
EaeI YGGCCR 1 cut(s) 92
Eam1104I CTCTTC 2 cut(s) 498, 675
EarI CTCTTC 2 cut(s) 498, 675
Ecl136II GAGCTC 2 cut(s) 71, 508
Eco130I CCWWGG 2 cut(s) 89, 1328
Eco24I GRGCYC 2 cut(s) 73, 510
Eco31I GGTCTC 2 cut(s) 1079, 1185
Eco47I GGWCC 1 cut(s) 308
Eco53kI GAGCTC 2 cut(s) 71, 508
Eco88I CYCGRG 1 cut(s) 1018
EcoICRI GAGCTC 2 cut(s) 71, 508
EcoRI GAATTC 2 cut(s) 280, 1341
EcoRII CCWGG 2 cut(s) 310, 1318
EcoT14I CCWWGG 2 cut(s) 89, 1328
EcoT22I ATGCAT 1 cut(s) 1177
EcoT38I GRGCYC 2 cut(s) 73, 510
ErhI CCWWGG 2 cut(s) 89, 1328
FaeI CATG 9 cut(s) 18, 117, 410, 496, 764, 832, 838, 1179, 1332
FalI AAGNNNNNCTT 2 cut(s) 1073, 1105
FaqI GGGAC 1 cut(s) 1220
FatI CATG 9 cut(s) 14, 113, 406, 492, 760, 828, 834, 1175, 1328
FauI CCCGC 2 cut(s) 868, 1262
FblI GTMKAC 1 cut(s) 300
Fnu4HI GCNGC 3 cut(s) 83, 176, 923
FokI GGATG 2 cut(s) 21, 1262
FriOI GRGCYC 2 cut(s) 73, 510
FseI GGCCGGCC 1 cut(s) 1027
Fsp4HI GCNGC 3 cut(s) 83, 176, 923
FspBI CTAG 4 cut(s) 645, 750, 965, 1097
GlaI GCGC 1 cut(s) 326
GluI GCNGC 3 cut(s) 83, 176, 923
GsaI CCCAGC 4 cut(s) 486, 1032, 1106, 1305
GsuI CTGGAG 1 cut(s) 333
HaeIII GGCC 4 cut(s) 94, 1023, 1027, 1181
HapII CCGG 3 cut(s) 1019, 1024, 1156
HgaI GACGC 3 cut(s) 181, 589, 635
HhaI GCGC 1 cut(s) 327
Hin1I GRCGYC 1 cut(s) 173
Hin1II CATG 9 cut(s) 18, 117, 410, 496, 764, 832, 838, 1179, 1332
Hin6I GCGC 1 cut(s) 325
HinP1I GCGC 1 cut(s) 325
HincII GTYRAC 1 cut(s) 625
HindII GTYRAC 1 cut(s) 625
HindIII AAGCTT 1 cut(s) 529
HinfI GANTC 4 cut(s) 414, 746, 862, 1136
HpaII CCGG 3 cut(s) 1019, 1024, 1156
HphI GGTGA 2 cut(s) 32, 554
Hpy166II GTNNAC 5 cut(s) 301, 308, 625, 817, 1364
Hpy188I TCNGA 3 cut(s) 401, 936, 1231
Hpy188III TCNNGA 1 cut(s) 750
Hpy8I GTNNAC 5 cut(s) 301, 308, 625, 817, 1364
Hpy99I CGWCG 3 cut(s) 137, 492, 583
HpyAV CCTTC 2 cut(s) 434, 995
HpyCH4III ACNGT 3 cut(s) 305, 361, 821
HpyCH4IV ACGT 2 cut(s) 899, 1143
HpyCH4V TGCA 4 cut(s) 12, 34, 438, 1175
HpyF10VI GCNNNNNNNGC 4 cut(s) 91, 589, 1029, 1345
HpyF3I CTNAG 5 cut(s) 272, 892, 918, 1230, 1240
HpySE526I ACGT 2 cut(s) 899, 1143
Hsp92I GRCGYC 1 cut(s) 173
Hsp92II CATG 9 cut(s) 18, 117, 410, 496, 764, 832, 838, 1179, 1332
HspAI GCGC 1 cut(s) 325
KroI GCCGGC 1 cut(s) 1023
KroNI GCCGGC 1 cut(s) 1025
LguI GCTCTTC 1 cut(s) 498
LmnI GCTCC 3 cut(s) 50, 68, 314
Lsp1109I GCAGC 2 cut(s) 69, 909
LweI GCATC 3 cut(s) 312, 735, 1326
MaeI CTAG 4 cut(s) 645, 750, 965, 1097
MaeII ACGT 2 cut(s) 899, 1143
MaeIII GTNAC 2 cut(s) 55, 352
MboII GAAGA 9 cut(s) 215, 218, 221, 224, 227, 363, 515, 692, 715
MhlI GDGCHC 4 cut(s) 73, 319, 510, 881
MlsI TGGCCA 1 cut(s) 94
MluCI AATT 4 cut(s) 280, 329, 1257, 1341
MluNI TGGCCA 1 cut(s) 94
MmeI TCCRAC 2 cut(s) 768, 882
Mox20I TGGCCA 1 cut(s) 94
Mph1103I ATGCAT 1 cut(s) 1177
MroNI GCCGGC 1 cut(s) 1023
MscI TGGCCA 1 cut(s) 94
MseI TTAA 3 cut(s) 419, 468, 1371
MslI CAYNNNNRTG 3 cut(s) 497, 765, 833
Msp20I TGGCCA 1 cut(s) 94
MspA1I CMGCKG 1 cut(s) 178
MspCI CTTAAG 1 cut(s) 418
MspI CCGG 3 cut(s) 1019, 1024, 1156
MspR9I CCNGG 4 cut(s) 312, 1019, 1020, 1320
Mva1269I GAATGC 1 cut(s) 1177
MvaI CCWGG 2 cut(s) 312, 1320
MwoI GCNNNNNNNGC 4 cut(s) 91, 589, 1029, 1345
NaeI GCCGGC 1 cut(s) 1025
NciI CCSGG 2 cut(s) 1019, 1020
NcoI CCATGG 1 cut(s) 1328
NgoMIV GCCGGC 1 cut(s) 1023
NlaIII CATG 9 cut(s) 18, 117, 410, 496, 764, 832, 838, 1179, 1332
NmeAIII GCCGAG 1 cut(s) 1033
NsiI ATGCAT 1 cut(s) 1177
NspV TTCGAA 1 cut(s) 427
PciSI GCTCTTC 1 cut(s) 498
PcsI WCGNNNNNNNCGW 1 cut(s) 633
PctI GAATGC 1 cut(s) 1177
PdiI GCCGGC 1 cut(s) 1025
PfeI GAWTC 4 cut(s) 414, 746, 862, 1136
PflMI CCANNNNNTGG 2 cut(s) 742, 1203
PkrI GCNGC 3 cut(s) 84, 177, 924
Psp124BI GAGCTC 2 cut(s) 73, 510
Psp1406I AACGTT 1 cut(s) 1143
Psp6I CCWGG 2 cut(s) 310, 1318
PspFI CCCAGC 4 cut(s) 482, 1028, 1102, 1301
PspGI CCWGG 2 cut(s) 310, 1318
PspPI GGNCC 4 cut(s) 308, 1021, 1026, 1179
RigI GGCCGGCC 1 cut(s) 1027
RsaI GTAC 1 cut(s) 193
RsaNI GTAC 1 cut(s) 192
RseI CAYNNNNRTG 3 cut(s) 497, 765, 833
SacI GAGCTC 2 cut(s) 73, 510
SapI GCTCTTC 1 cut(s) 498
SaqAI TTAA 3 cut(s) 419, 468, 1371
SatI GCNGC 3 cut(s) 83, 176, 923
Sau96I GGNCC 4 cut(s) 308, 1021, 1026, 1179
ScrFI CCNGG 4 cut(s) 312, 1019, 1020, 1320
SduI GDGCHC 4 cut(s) 73, 319, 510, 881
SfaNI GCATC 3 cut(s) 312, 735, 1326
SfuI TTCGAA 1 cut(s) 427
SinI GGWCC 1 cut(s) 308
SmaI CCCGGG 1 cut(s) 1020
SmiMI CAYNNNNRTG 3 cut(s) 497, 765, 833
SmlI CTYRAG 1 cut(s) 418
SmoI CTYRAG 1 cut(s) 418
SrfI GCCCGGGC 1 cut(s) 1020
Sse9I AATT 4 cut(s) 280, 329, 1257, 1341
SsiI CCGC 6 cut(s) 29, 176, 548, 724, 875, 1269
SspMI CTAG 4 cut(s) 645, 750, 965, 1097
SstI GAGCTC 2 cut(s) 73, 510
StyD4I CCNGG 4 cut(s) 310, 1017, 1018, 1318
StyI CCWWGG 2 cut(s) 89, 1328
TaaI ACNGT 3 cut(s) 305, 361, 821
TaiI ACGT 2 cut(s) 902, 1146
TaqI TCGA 3 cut(s) 427, 674, 1126
TaqII GACCGA 1 cut(s) 426
TasI AATT 4 cut(s) 280, 329, 1257, 1341
TatI WGTACW 1 cut(s) 191
TauI GCSGC 1 cut(s) 178
TfiI GAWTC 4 cut(s) 414, 746, 862, 1136
Tru1I TTAA 3 cut(s) 419, 468, 1371
Tru9I TTAA 3 cut(s) 419, 468, 1371
TscAI CASTG 2 cut(s) 814, 826
TseI GCWGC 2 cut(s) 82, 922
TspDTI ATGAA 3 cut(s) 363, 509, 540
TspMI CCCGGG 1 cut(s) 1018
TspRI CASTG 2 cut(s) 814, 826
Van91I CCANNNNNTGG 2 cut(s) 742, 1203
Vha464I CTTAAG 1 cut(s) 418
VpaK11BI GGWCC 1 cut(s) 308
XapI RAATTY 2 cut(s) 280, 1341
XbaI TCTAGA 1 cut(s) 749
XcmI CCANNNNNNNNNTGG 1 cut(s) 784
XmaI CCCGGG 1 cut(s) 1018
XmiI GTMKAC 1 cut(s) 300
XspI CTAG 4 cut(s) 645, 750, 965, 1097
Zsp2I ATGCAT 1 cut(s) 1177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.