Prupe.1G230700_v2.0.a1

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001080
Physical Location & Seq
Forward (+)
24436231 .. 24438561
2331 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G230700.1

Sequence Viewer

Length: 1008 bp
ATGGATTTCTTTTGTTTTTGTATGGTCCTGCTAAGCCTTTTCTCTGTGTTATTGTTCTCAATTACTCAAGCTCTGCAAAGCAAAGCCAATCCCAAAAGGCATCTTCTCCCACTTGGACCAAAGCCATTTCCCTTCATTGGCAATCTTCTAGAACTTGGAAACAAACCCCATCAATCTCTCACCAAGCTTTCTCAAATCTATGACCCCATTATAACTCTGCAACTAGCCAAACAAGTCCTCCGAACCCACGACCAATTCTTGTCCAACCGAACCATCCCAGATGCATTTCAAGCCTATGACTTTCGCCAGGACAGCCTGCCATGCATACCACCTTCGGCCAAATGGAGAAGCCTTCGACAAATATGCAACTCTCAATTGTTCGCCGCCAAAATCCTCAAAGCCAACCAACCCAACCGCCGCATAAAAGTGCAAGAGCTCATATCTCAGGTCAACGAAAGTACAGTCAATAGTGAGGCGGTAGTTATTGGAAGGGCCGCTTTCACTACGCTCATTCTGCTGTCTCGTATTGTTTTCTCAGTGGATTTGGCTAACTCAAGTAGCGAGATGGCCAGGGAGTTCAAGGAGACTGTGTGCGGTTTGATGGAAGGGATGGAACAACTCTTTGACTGCATGATTAGCCAAAGATTGGCATCAAGAAAAGCCCATGATTATGTCAGAACCAATGATATGCTGGATACTCTTTTGAACATCAGTGAAGCGAATAGTGAGGACATGGACAAGACCAAAATTCGACATATGTTTCTGGCTCTATTTGCCGCGGGGACTGATACAACTTCAGCCACATTGGAATGGGCCATGGCTGAGCTGCAACGCGACCTTGAAAAGCTGTCAAAAACTCAACAAGAGCTGGAGCAAATCATTGGCAAAGGAAAACCAGTAGAAGAAGCAGACCAAAATAATGTAAGAATTGATGGGGCTCATGATAAGAATTTAGATGACTTCATTTTCGTCAATTCACACCAGGTGCCTTTCCCAATCTGTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

336

Amino Acids

37.91

Weight (kDa)

6.4

Isoelectric Point (pI)

39.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 212
AccB1I GGYRCC 1 cut(s) 985
AccB7I CCANNNNNTGG 1 cut(s) 646
AccII CGCG 2 cut(s) 779, 834
AciI CCGC 8 cut(s) 384, 415, 418, 476, 495, 594, 777, 779
AcoI YGGCCR 2 cut(s) 336, 567
AcsI RAATTY 2 cut(s) 747, 949
AcuI CTGAAG 1 cut(s) 780
AdeI CACNNNGTG 1 cut(s) 985
AfaI GTAC 1 cut(s) 460
AfiI CCNNNNNNNGG 2 cut(s) 137, 646
AgsI TTSAA 4 cut(s) 290, 580, 706, 842
AjnI CCWGG 3 cut(s) 306, 569, 981
AluBI AGCT 6 cut(s) 71, 187, 436, 826, 847, 868
AluI AGCT 6 cut(s) 71, 187, 436, 826, 847, 868
Alw21I GWGCWC 1 cut(s) 438
Alw26I GTCTC 2 cut(s) 525, 578
AoxI GGCC 4 cut(s) 336, 492, 567, 813
ApeKI GCWGC 1 cut(s) 826
ApoI RAATTY 2 cut(s) 747, 949
ArsI GACNNNNNNTTYG 4 cut(s) 447, 479, 950, 982
AspS9I GGNCC 4 cut(s) 25, 116, 492, 813
AsuHPI GGTGA 1 cut(s) 172
AvaII GGWCC 2 cut(s) 25, 116
BalI TGGCCA 1 cut(s) 569
BanI GGYRCC 1 cut(s) 985
BanII GRGCYC 2 cut(s) 438, 940
Bbv12I GWGCWC 1 cut(s) 438
BbvI GCAGC 1 cut(s) 813
BccI CCATC 6 cut(s) 177, 281, 559, 595, 604, 926
BcgI CGANNNNNNTGC 2 cut(s) 345, 379
BciT130I CCWGG 3 cut(s) 308, 571, 983
BciVI GTATCC 1 cut(s) 688
BcoDI GTCTC 2 cut(s) 525, 578
BfaI CTAG 2 cut(s) 149, 224
BfuI GTATCC 1 cut(s) 688
BisI GCNGC 5 cut(s) 384, 418, 495, 777, 827
BlpI GCTNAGC 2 cut(s) 32, 822
BlsI GCNGC 5 cut(s) 385, 419, 496, 778, 828
Bme1390I CCNGG 3 cut(s) 308, 571, 983
Bme18I GGWCC 2 cut(s) 25, 116
BmgT120I GGNCC 4 cut(s) 25, 116, 492, 813
BmiI GGNNCC 1 cut(s) 987
BmrFI CCNGG 3 cut(s) 308, 571, 983
BmsI GCATC 3 cut(s) 109, 271, 659
BpmI CTGGAG 1 cut(s) 890
Bpu1102I GCTNAGC 2 cut(s) 32, 822
BpuEI CTTGAG 2 cut(s) 51, 538
BsaBI GATNNNNATC 1 cut(s) 649
BsaJI CCNNGG 3 cut(s) 570, 777, 816
BsaXI ACNNNNNCTCC 4 cut(s) 222, 252, 575, 605
Bsc4I CCNNNNNNNGG 2 cut(s) 137, 646
Bse1I ACTGG 1 cut(s) 896
Bse8I GATNNNNATC 1 cut(s) 649
BseBI CCWGG 3 cut(s) 308, 571, 983
BseDI CCNNGG 3 cut(s) 570, 777, 816
BseGI GGATG 2 cut(s) 273, 615
BseJI GATNNNNATC 1 cut(s) 649
BseLI CCNNNNNNNGG 2 cut(s) 137, 646
BseMII CTCAG 3 cut(s) 458, 549, 813
BseNI ACTGG 1 cut(s) 896
BseXI GCAGC 1 cut(s) 813
Bsh1236I CGCG 2 cut(s) 779, 834
BshFI GGCC 4 cut(s) 338, 494, 569, 815
BshNI GGYRCC 1 cut(s) 985
BsiHKAI GWGCWC 1 cut(s) 438
BslFI GGGAC 1 cut(s) 796
BslI CCNNNNNNNGG 2 cut(s) 137, 646
BsmAI GTCTC 2 cut(s) 525, 578
BsmFI GGGAC 1 cut(s) 796
BsnI GGCC 4 cut(s) 338, 494, 569, 815
Bsp1286I GDGCHC 2 cut(s) 438, 940
Bsp1720I GCTNAGC 2 cut(s) 32, 822
Bsp19I CCATGG 1 cut(s) 816
BspACI CCGC 8 cut(s) 384, 415, 418, 476, 495, 594, 777, 779
BspANI GGCC 4 cut(s) 338, 494, 569, 815
BspCNI CTCAG 3 cut(s) 457, 548, 814
BspFNI CGCG 2 cut(s) 779, 834
BspHI TCATGA 1 cut(s) 940
BspLI GGNNCC 1 cut(s) 987
BspT107I GGYRCC 1 cut(s) 985
BsrI ACTGG 1 cut(s) 896
BssECI CCNNGG 3 cut(s) 570, 777, 816
BssT1I CCWWGG 1 cut(s) 816
Bst2UI CCWGG 3 cut(s) 308, 571, 983
Bst4CI ACNGT 2 cut(s) 463, 589
BstC8I GCNNGC 1 cut(s) 317
BstDEI CTNAG 4 cut(s) 32, 444, 535, 822
BstDSI CCRYGG 2 cut(s) 777, 816
BstF5I GGATG 2 cut(s) 273, 615
BstFNI CGCG 2 cut(s) 779, 834
BstMAI GTCTC 2 cut(s) 525, 578
BstMWI GCNNNNNNNGC 6 cut(s) 290, 312, 321, 514, 636, 773
BstNI CCWGG 3 cut(s) 308, 571, 983
BstSCI CCNGG 3 cut(s) 306, 569, 981
BstUI CGCG 2 cut(s) 779, 834
BstV1I GCAGC 1 cut(s) 813
BsuI GTATCC 1 cut(s) 688
BsuRI GGCC 4 cut(s) 338, 494, 569, 815
BtgI CCRYGG 2 cut(s) 777, 816
BtsCI GGATG 2 cut(s) 273, 615
BtsIMutI CAGTG 2 cut(s) 543, 718
Cac8I GCNNGC 1 cut(s) 317
CciI TCATGA 1 cut(s) 940
Cfr13I GGNCC 4 cut(s) 25, 116, 492, 813
Cfr42I CCGCGG 1 cut(s) 780
CsiI ACCWGGT 1 cut(s) 981
Csp6I GTAC 1 cut(s) 459
CviAII CATG 6 cut(s) 321, 631, 665, 733, 817, 941
CviQI GTAC 1 cut(s) 459
DdeI CTNAG 4 cut(s) 32, 444, 535, 822
DraIII CACNNNGTG 1 cut(s) 985
EaeI YGGCCR 2 cut(s) 336, 567
Ecl136II GAGCTC 1 cut(s) 436
Eco130I CCWWGG 1 cut(s) 816
Eco24I GRGCYC 2 cut(s) 438, 940
Eco47I GGWCC 2 cut(s) 25, 116
Eco53kI GAGCTC 1 cut(s) 436
Eco57I CTGAAG 1 cut(s) 780
EcoICRI GAGCTC 1 cut(s) 436
EcoRII CCWGG 3 cut(s) 306, 569, 981
EcoT14I CCWWGG 1 cut(s) 816
EcoT22I ATGCAT 2 cut(s) 286, 326
EcoT38I GRGCYC 2 cut(s) 438, 940
ErhI CCWWGG 1 cut(s) 816
FaeI CATG 6 cut(s) 324, 634, 668, 736, 820, 944
FalI AAGNNNNNCTT 2 cut(s) 481, 513
FaqI GGGAC 1 cut(s) 796
FatI CATG 6 cut(s) 320, 630, 664, 732, 816, 940
FauI CCCGC 1 cut(s) 772
FauNDI CATATG 1 cut(s) 756
Fnu4HI GCNGC 5 cut(s) 384, 418, 495, 777, 827
FokI GGATG 2 cut(s) 260, 622
FriOI GRGCYC 2 cut(s) 438, 940
Fsp4HI GCNGC 5 cut(s) 384, 418, 495, 777, 827
FspBI CTAG 2 cut(s) 149, 224
GluI GCNGC 5 cut(s) 384, 418, 495, 777, 827
GsuI CTGGAG 1 cut(s) 890
HaeIII GGCC 4 cut(s) 338, 494, 569, 815
Hin1II CATG 6 cut(s) 324, 634, 668, 736, 820, 944
HincII GTYRAC 1 cut(s) 451
HindII GTYRAC 1 cut(s) 451
HindIII AAGCTT 1 cut(s) 185
HphI GGTGA 1 cut(s) 172
Hpy166II GTNNAC 1 cut(s) 451
Hpy188I TCNGA 2 cut(s) 242, 677
Hpy188III TCNNGA 3 cut(s) 149, 654, 941
Hpy8I GTNNAC 1 cut(s) 451
HpyAV CCTTC 5 cut(s) 142, 342, 362, 483, 599
HpyCH4III ACNGT 2 cut(s) 463, 589
HpyCH4V TGCA 8 cut(s) 76, 220, 284, 324, 366, 430, 630, 829
HpyF10VI GCNNNNNNNGC 6 cut(s) 290, 312, 321, 514, 636, 773
HpyF3I CTNAG 4 cut(s) 32, 444, 535, 822
Hsp92II CATG 6 cut(s) 324, 634, 668, 736, 820, 944
KspI CCGCGG 1 cut(s) 780
LmnI GCTCC 1 cut(s) 871
Lsp1109I GCAGC 1 cut(s) 813
LweI GCATC 3 cut(s) 109, 271, 659
MabI ACCWGGT 1 cut(s) 981
MaeI CTAG 2 cut(s) 149, 224
MboII GAAGA 3 cut(s) 95, 137, 914
MfeI CAATTG 1 cut(s) 374
MhlI GDGCHC 2 cut(s) 438, 940
MlsI TGGCCA 1 cut(s) 569
MluCI AATT 7 cut(s) 60, 254, 374, 747, 927, 949, 973
MluNI TGGCCA 1 cut(s) 569
MmeI TCCRAC 1 cut(s) 288
MnlI CCTC 4 cut(s) 248, 404, 466, 721
Mox20I TGGCCA 1 cut(s) 569
Mph1103I ATGCAT 2 cut(s) 286, 326
MscI TGGCCA 1 cut(s) 569
MslI CAYNNNNRTG 3 cut(s) 425, 669, 808
Msp20I TGGCCA 1 cut(s) 569
MspA1I CMGCKG 1 cut(s) 779
MspR9I CCNGG 3 cut(s) 308, 571, 983
MunI CAATTG 1 cut(s) 374
MvaI CCWGG 3 cut(s) 308, 571, 983
MvnI CGCG 2 cut(s) 779, 834
MwoI GCNNNNNNNGC 6 cut(s) 290, 312, 321, 514, 636, 773
NcoI CCATGG 1 cut(s) 816
NdeI CATATG 1 cut(s) 756
NlaIII CATG 6 cut(s) 324, 634, 668, 736, 820, 944
NlaIV GGNNCC 1 cut(s) 987
NsiI ATGCAT 2 cut(s) 286, 326
PagI TCATGA 1 cut(s) 940
PflMI CCANNNNNTGG 1 cut(s) 646
PkrI GCNGC 5 cut(s) 385, 419, 496, 778, 828
PsiI TTATAA 1 cut(s) 212
Psp124BI GAGCTC 1 cut(s) 438
Psp6I CCWGG 3 cut(s) 306, 569, 981
PspGI CCWGG 3 cut(s) 306, 569, 981
PspN4I GGNNCC 1 cut(s) 987
PspPI GGNCC 4 cut(s) 25, 116, 492, 813
RsaI GTAC 1 cut(s) 460
RsaNI GTAC 1 cut(s) 459
RseI CAYNNNNRTG 3 cut(s) 425, 669, 808
SacI GAGCTC 1 cut(s) 438
SacII CCGCGG 1 cut(s) 780
SatI GCNGC 5 cut(s) 384, 418, 495, 777, 827
Sau96I GGNCC 4 cut(s) 25, 116, 492, 813
ScrFI CCNGG 3 cut(s) 308, 571, 983
SduI GDGCHC 2 cut(s) 438, 940
SexAI ACCWGGT 1 cut(s) 981
SfaNI GCATC 3 cut(s) 109, 271, 659
Sfr303I CCGCGG 1 cut(s) 780
SgrBI CCGCGG 1 cut(s) 780
SinI GGWCC 2 cut(s) 25, 116
SmiMI CAYNNNNRTG 3 cut(s) 425, 669, 808
SmlI CTYRAG 2 cut(s) 66, 553
SmoI CTYRAG 2 cut(s) 66, 553
Sse9I AATT 7 cut(s) 60, 254, 374, 747, 927, 949, 973
SsiI CCGC 8 cut(s) 384, 415, 418, 476, 495, 594, 777, 779
SspMI CTAG 2 cut(s) 149, 224
SstI GAGCTC 1 cut(s) 438
StyD4I CCNGG 3 cut(s) 306, 569, 981
StyI CCWWGG 1 cut(s) 816
TaaI ACNGT 2 cut(s) 463, 589
TaqI TCGA 2 cut(s) 355, 751
TasI AATT 7 cut(s) 60, 254, 374, 747, 927, 949, 973
TatI WGTACW 1 cut(s) 458
TauI GCSGC 4 cut(s) 386, 420, 497, 779
TscAI CASTG 2 cut(s) 543, 718
TseI GCWGC 1 cut(s) 826
TspDTI ATGAA 2 cut(s) 124, 952
TspRI CASTG 2 cut(s) 543, 718
Van91I CCANNNNNTGG 1 cut(s) 646
VpaK11BI GGWCC 2 cut(s) 25, 116
XapI RAATTY 2 cut(s) 747, 949
XbaI TCTAGA 1 cut(s) 148
XcmI CCANNNNNNNNNTGG 1 cut(s) 688
XspI CTAG 2 cut(s) 149, 224
Zsp2I ATGCAT 2 cut(s) 286, 326
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.