Rw7G020050

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0001080
Physical Location & Seq
Reverse (-)
22527402 .. 22529258
1857 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G020050.1

Sequence Viewer

Length: 1398 bp
ATGAACTTCTGGAGTGCTTTCGTTTACCTTATCCTCACCTGGACATTTATCCAAGCCCTCCTCTACTCAATTTCAAGAGCCAAAAACAGTTCCAAAAAGCTTCCACCAGGTCCAAAACCGCTTCCAATCCTCGGAAACCTTCTCCTACTTGGTGACAGACCTCACAAATCTCTTGCCGAACTTGCCAAAATCCATGGCCCTTTGATGTCCCTAAAACTTGGACAAGTAACCTCCATAGTTGTTTCTTCATCAGCCATGGCTAAACAAGTCCTCCAAACCCATGACCAATACTTGTCCAATCGAACAGTCCCTGATGCCATTCGAGCCCTTGATCACCACACTATCGGCTTGCCATGGATCCCAGTCTCTCCCCTTTGGAGAAACCAAAGAAAAATATGCAACACTCAGCTATTTGCCAACAAAAGCTTGATGCTAACCAAAACTTGCGACGGAAGAAACCTGAGTGGGGAAGCAGTTGACTTTGGTAGGGCAGCTTTTACTACGACACTCAATTTGCTGTCTAATACAATTTTTTCGATTGATTTAGCAGACCGCCCGAGTTCCAAAATGGCCAGGGAGTTCAAGGAGATGGTGCATAATATTATGATCGAGGCTGGAAAACCAAACTTGGGGGACTATTTAGTTGAAACAATAGTTCAGCAGAGGTTGGAGCTGAGAAAATCGACTGAATCTGCAACAAAGAACGATGTGTTGGATACCCTTCCCACTATTACAGAGGAAAACAGTGAGGAGCTCAACAAAAATCAACTTTATCATTTCATCCTGGTTCTTTTTGTTGCAGGGTCAGACACAGCTTCATCCACATTCCAATGGGCAATGGCAGAGCTCTTGCACAACCCTGAAGTTCTCTCAAAAGCACAATTAGAGCTTAACAAAGTAATTGGCAAAGGCAATCATGTTGAGGAATCAGACATTACTAGACTACCTTACTTGCAAGCCATTATTAAAGAAACATTTCGTATGCACCCTGCAGTTCCTTTGTTACTTCCCCGAAAAGCCGAATCAGATGTAGAGATTGAAGGCTCCACAGTCCCGAAGGGTGCACAAGTGCTTGTTAACGCATGGGCCATTGGCAGAGACCCAAGCATATGGGATGACCCGAATTCATTCAAGCCAGAGAGGTTCTTGGGGTCTCTACTCGATGTTAGAGGCCGGAATTTTGAACTTATTCCATTTGGCGCCGGCAGGAGAATATGTCCGGGATTGCCATTGGCAATGAGAATGTTGCACTTAATGTTGGGTTCTCTTATCGATTCCTTTGTTTGGAAGCTTGAAGATGGAATTACACCAGAGAACATGAACATGGATGATAAGTTTGTACTCACCCTAGAGATGGCCAAACCATTGAGAGCTATCCCTATCCCTATCCCTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

465

Amino Acids

52.0

Weight (kDa)

8.28

Isoelectric Point (pI)

34.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 35 - 449 1e-86 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1199
AciI CCGC 2 cut(s) 119, 553
AclWI GGATC 2 cut(s) 352, 365
AcoI YGGCCR 2 cut(s) 570, 1356
AcsI RAATTY 2 cut(s) 1123, 1177
AcuI CTGAAG 1 cut(s) 882
AcyI GRCGYC 1 cut(s) 1200
AfaI GTAC 1 cut(s) 1341
AfiI CCNNNNNNNGG 5 cut(s) 131, 466, 629, 1284, 1354
AgsI TTSAA 7 cut(s) 75, 583, 647, 1040, 1132, 1184, 1295
AjnI CCWGG 4 cut(s) 38, 106, 572, 783
AjuI GAANNNNNNNTTGG 2 cut(s) 695, 727
Alw21I GWGCWC 3 cut(s) 756, 849, 1066
Alw26I GTCTC 3 cut(s) 370, 1092, 1158
Alw44I GTGCAC 1 cut(s) 1062
AlwI GGATC 2 cut(s) 352, 365
AlwNI CAGNNNCTG 1 cut(s) 311
Ama87I CYCGRG 1 cut(s) 556
AoxI GGCC 5 cut(s) 196, 570, 1086, 1171, 1356
ApaLI GTGCAC 1 cut(s) 1062
ApeKI GCWGC 1 cut(s) 491
ApoI RAATTY 2 cut(s) 1123, 1177
ArsI GACNNNNNNTTYG 2 cut(s) 496, 528
Asp700I GAANNNNTTC 3 cut(s) 975, 1127, 1188
AspLEI GCGC 1 cut(s) 1202
AspS9I GGNCC 3 cut(s) 110, 197, 1086
AsuC2I CCSGG 1 cut(s) 1221
AsuHPI GGTGA 4 cut(s) 28, 164, 326, 1336
AvaI CYCGRG 1 cut(s) 556
AvaII GGWCC 1 cut(s) 110
BaeGI GKGCMC 1 cut(s) 1066
BalI TGGCCA 2 cut(s) 572, 1358
BamHI GGATCC 1 cut(s) 357
BanI GGYRCC 1 cut(s) 1199
BanII GRGCYC 3 cut(s) 328, 756, 849
Bbv12I GWGCWC 3 cut(s) 756, 849, 1066
BbvI GCAGC 1 cut(s) 503
BccI CCATC 3 cut(s) 583, 1292, 1348
BciT130I CCWGG 4 cut(s) 40, 108, 574, 785
BciVI GTATCC 1 cut(s) 709
BclI TGATCA 1 cut(s) 331
BcnI CCSGG 1 cut(s) 1221
BcoDI GTCTC 3 cut(s) 370, 1092, 1158
BfaI CTAG 2 cut(s) 939, 1349
BfmI CTRYAG 1 cut(s) 990
BfoI RGCGCY 1 cut(s) 1203
BfuI GTATCC 1 cut(s) 709
BisI GCNGC 1 cut(s) 492
BlsI GCNGC 1 cut(s) 493
Bme1390I CCNGG 5 cut(s) 40, 108, 574, 785, 1221
Bme18I GGWCC 1 cut(s) 110
BmeT110I CYCGRG 1 cut(s) 556
BmgT120I GGNCC 3 cut(s) 110, 197, 1086
BmiI GGNNCC 3 cut(s) 359, 1045, 1201
BmrFI CCNGG 5 cut(s) 40, 108, 574, 785, 1221
BmrI ACTGGG 1 cut(s) 356
BmsI GCATC 2 cut(s) 304, 420
BmuI ACTGGG 1 cut(s) 356
BpmI CTGGAG 1 cut(s) 31
BpuMI CCSGG 1 cut(s) 1221
Bsa29I ATCGAT 1 cut(s) 1272
BsaHI GRCGYC 1 cut(s) 1200
BsaI GGTCTC 2 cut(s) 1092, 1158
BsaJI CCNNGG 5 cut(s) 130, 193, 255, 353, 573
BsaXI ACNNNNNCTCC 4 cut(s) 255, 285, 1201, 1231
Bsc4I CCNNNNNNNGG 5 cut(s) 131, 466, 629, 1284, 1354
Bse118I RCCGGY 1 cut(s) 1202
Bse1I ACTGG 1 cut(s) 362
Bse3DI GCAATG 2 cut(s) 843, 1242
BseBI CCWGG 4 cut(s) 40, 108, 574, 785
BseCI ATCGAT 1 cut(s) 1272
BseDI CCNNGG 5 cut(s) 130, 193, 255, 353, 573
BseGI GGATG 4 cut(s) 780, 818, 1120, 1333
BseLI CCNNNNNNNGG 5 cut(s) 131, 466, 629, 1284, 1354
BseMI GCAATG 2 cut(s) 843, 1242
BseMII CTCAG 3 cut(s) 419, 452, 665
BseNI ACTGG 1 cut(s) 362
BseRI GAGGAG 2 cut(s) 50, 764
BseSI GKGCMC 1 cut(s) 1066
BseXI GCAGC 1 cut(s) 503
BshFI GGCC 5 cut(s) 198, 572, 1088, 1173, 1358
BshNI GGYRCC 1 cut(s) 1199
BshVI ATCGAT 1 cut(s) 1272
BsiHKAI GWGCWC 3 cut(s) 756, 849, 1066
BsiHKCI CYCGRG 1 cut(s) 556
BsiSI CCGG 3 cut(s) 1174, 1203, 1220
BslFI GGGAC 4 cut(s) 193, 293, 647, 1037
BslI CCNNNNNNNGG 5 cut(s) 131, 466, 629, 1284, 1354
BsmAI GTCTC 3 cut(s) 370, 1092, 1158
BsmFI GGGAC 4 cut(s) 193, 293, 647, 1037
BsnI GGCC 5 cut(s) 198, 572, 1088, 1173, 1358
Bso31I GGTCTC 2 cut(s) 1092, 1158
BsoBI CYCGRG 1 cut(s) 556
Bsp1286I GDGCHC 4 cut(s) 328, 756, 849, 1066
Bsp143I GATC 3 cut(s) 331, 357, 606
Bsp19I CCATGG 3 cut(s) 193, 255, 353
BspACI CCGC 2 cut(s) 119, 553
BspANI GGCC 5 cut(s) 198, 572, 1088, 1173, 1358
BspCNI CTCAG 3 cut(s) 418, 453, 666
BspDI ATCGAT 1 cut(s) 1272
BspLI GGNNCC 3 cut(s) 359, 1045, 1201
BspMAI CTGCAG 1 cut(s) 994
BspPI GGATC 2 cut(s) 352, 365
BspT107I GGYRCC 1 cut(s) 1199
BspTNI GGTCTC 2 cut(s) 1092, 1158
BsrDI GCAATG 2 cut(s) 843, 1242
BsrFI RCCGGY 1 cut(s) 1202
BsrI ACTGG 1 cut(s) 362
BssAI RCCGGY 1 cut(s) 1202
BssECI CCNNGG 5 cut(s) 130, 193, 255, 353, 573
BssMI GATC 3 cut(s) 331, 357, 606
BssNI GRCGYC 1 cut(s) 1200
BssT1I CCWWGG 3 cut(s) 193, 255, 353
Bst2UI CCWGG 4 cut(s) 40, 108, 574, 785
Bst4CI ACNGT 4 cut(s) 89, 307, 746, 1051
BstACI GRCGYC 1 cut(s) 1200
BstC8I GCNNGC 3 cut(s) 350, 957, 1204
BstDEI CTNAG 4 cut(s) 405, 461, 674, 1392
BstDSI CCRYGG 3 cut(s) 193, 255, 353
BstF5I GGATG 4 cut(s) 780, 818, 1120, 1333
BstH2I RGCGCY 1 cut(s) 1203
BstHHI GCGC 1 cut(s) 1202
BstKTI GATC 3 cut(s) 334, 360, 609
BstMAI GTCTC 3 cut(s) 370, 1092, 1158
BstMBI GATC 3 cut(s) 331, 357, 606
BstMWI GCNNNNNNNGC 2 cut(s) 182, 323
BstNI CCWGG 4 cut(s) 40, 108, 574, 785
BstSCI CCNGG 5 cut(s) 38, 106, 572, 783, 1219
BstSFI CTRYAG 1 cut(s) 990
BstSLI GKGCMC 1 cut(s) 1066
BstV1I GCAGC 1 cut(s) 503
BstX2I RGATCY 1 cut(s) 357
BstXI CCANNNNNNTGG 1 cut(s) 1110
BstYI RGATCY 1 cut(s) 357
Bsu15I ATCGAT 1 cut(s) 1272
BsuI GTATCC 1 cut(s) 709
BsuRI GGCC 5 cut(s) 198, 572, 1088, 1173, 1358
BsuTUI ATCGAT 1 cut(s) 1272
BtgI CCRYGG 3 cut(s) 193, 255, 353
BtsCI GGATG 4 cut(s) 780, 818, 1120, 1333
BtsIMutI CAGTG 1 cut(s) 751
Cac8I GCNNGC 3 cut(s) 350, 957, 1204
CaiI CAGNNNCTG 1 cut(s) 311
CfoI GCGC 1 cut(s) 1202
Cfr10I RCCGGY 1 cut(s) 1202
Cfr13I GGNCC 3 cut(s) 110, 197, 1086
ClaI ATCGAT 1 cut(s) 1272
CsiI ACCWGGT 1 cut(s) 106
Csp6I GTAC 1 cut(s) 1340
CviAII CATG 8 cut(s) 194, 256, 281, 354, 917, 1083, 1318, 1324
CviQI GTAC 1 cut(s) 1340
DdeI CTNAG 4 cut(s) 405, 461, 674, 1392
DinI GGCGCC 1 cut(s) 1201
DpnI GATC 3 cut(s) 333, 359, 608
DpnII GATC 3 cut(s) 331, 357, 606
EaeI YGGCCR 2 cut(s) 570, 1356
Ecl136II GAGCTC 2 cut(s) 754, 847
Eco130I CCWWGG 3 cut(s) 193, 255, 353
Eco24I GRGCYC 3 cut(s) 328, 756, 849
Eco31I GGTCTC 2 cut(s) 1092, 1158
Eco47I GGWCC 1 cut(s) 110
Eco53kI GAGCTC 2 cut(s) 754, 847
Eco57I CTGAAG 1 cut(s) 882
Eco88I CYCGRG 1 cut(s) 556
EcoICRI GAGCTC 2 cut(s) 754, 847
EcoRI GAATTC 1 cut(s) 1123
EcoRII CCWGG 4 cut(s) 38, 106, 572, 783
EcoT14I CCWWGG 3 cut(s) 193, 255, 353
EcoT38I GRGCYC 3 cut(s) 328, 756, 849
EgeI GGCGCC 1 cut(s) 1201
EheI GGCGCC 1 cut(s) 1201
ErhI CCWWGG 3 cut(s) 193, 255, 353
FaeI CATG 8 cut(s) 197, 259, 284, 357, 920, 1086, 1321, 1327
FaqI GGGAC 4 cut(s) 193, 293, 647, 1037
FatI CATG 8 cut(s) 193, 255, 280, 353, 916, 1082, 1317, 1323
FauNDI CATATG 1 cut(s) 1109
FbaI TGATCA 1 cut(s) 331
Fnu4HI GCNGC 1 cut(s) 492
FokI GGATG 4 cut(s) 767, 805, 1127, 1340
FriOI GRGCYC 3 cut(s) 328, 756, 849
Fsp4HI GCNGC 1 cut(s) 492
FspBI CTAG 2 cut(s) 939, 1349
GlaI GCGC 1 cut(s) 1201
GluI GCNGC 1 cut(s) 492
GsuI CTGGAG 1 cut(s) 31
HaeII RGCGCY 1 cut(s) 1203
HaeIII GGCC 5 cut(s) 198, 572, 1088, 1173, 1358
HapII CCGG 3 cut(s) 1174, 1203, 1220
HhaI GCGC 1 cut(s) 1202
Hin1I GRCGYC 1 cut(s) 1200
Hin1II CATG 8 cut(s) 197, 259, 284, 357, 920, 1086, 1321, 1327
Hin6I GCGC 1 cut(s) 1200
HinP1I GCGC 1 cut(s) 1200
HincII GTYRAC 2 cut(s) 478, 1078
HindII GTYRAC 2 cut(s) 478, 1078
HindIII AAGCTT 3 cut(s) 98, 424, 1289
HinfI GANTC 4 cut(s) 689, 926, 1022, 1274
HpaI GTTAAC 1 cut(s) 1078
HpaII CCGG 3 cut(s) 1174, 1203, 1220
HphI GGTGA 4 cut(s) 28, 164, 326, 1336
Hpy166II GTNNAC 4 cut(s) 25, 478, 1064, 1078
Hpy188I TCNGA 4 cut(s) 134, 808, 931, 1027
Hpy188III TCNNGA 3 cut(s) 10, 75, 1054
Hpy8I GTNNAC 4 cut(s) 25, 478, 1064, 1078
Hpy99I CGWCG 1 cut(s) 452
HpyAV CCTTC 4 cut(s) 149, 731, 1034, 1051
HpyCH4III ACNGT 4 cut(s) 89, 307, 746, 1051
HpyF10VI GCNNNNNNNGC 2 cut(s) 182, 323
HpyF3I CTNAG 4 cut(s) 405, 461, 674, 1392
Hsp92I GRCGYC 1 cut(s) 1200
Hsp92II CATG 8 cut(s) 197, 259, 284, 357, 920, 1086, 1321, 1327
HspAI GCGC 1 cut(s) 1200
KasI GGCGCC 1 cut(s) 1199
KroI GCCGGC 1 cut(s) 1202
KroNI GCCGGC 1 cut(s) 1204
Ksp22I TGATCA 1 cut(s) 331
KspAI GTTAAC 1 cut(s) 1078
Kzo9I GATC 3 cut(s) 331, 357, 606
LmnI GCTCC 3 cut(s) 670, 751, 1049
Lsp1109I GCAGC 1 cut(s) 503
LweI GCATC 2 cut(s) 304, 420
MabI ACCWGGT 1 cut(s) 106
MaeI CTAG 2 cut(s) 939, 1349
MaeIII GTNAC 3 cut(s) 152, 226, 1002
MalI GATC 3 cut(s) 333, 359, 608
MboI GATC 3 cut(s) 331, 357, 606
MboII GAAGA 3 cut(s) 237, 465, 1307
MflI RGATCY 1 cut(s) 357
MhlI GDGCHC 4 cut(s) 328, 756, 849, 1066
MlsI TGGCCA 2 cut(s) 572, 1358
MluCI AATT 8 cut(s) 69, 511, 528, 881, 900, 1123, 1177, 1302
MluNI TGGCCA 2 cut(s) 572, 1358
Mly113I GGCGCC 1 cut(s) 1200
MmeI TCCRAC 2 cut(s) 648, 693
Mox20I TGGCCA 2 cut(s) 572, 1358
MroNI GCCGGC 1 cut(s) 1202
MroXI GAANNNNTTC 3 cut(s) 975, 1127, 1188
MscI TGGCCA 2 cut(s) 572, 1358
MseI TTAA 4 cut(s) 891, 966, 1077, 1253
MslI CAYNNNNRTG 2 cut(s) 829, 1322
Msp20I TGGCCA 2 cut(s) 572, 1358
MspI CCGG 3 cut(s) 1174, 1203, 1220
MspR9I CCNGG 5 cut(s) 40, 108, 574, 785, 1221
MvaI CCWGG 4 cut(s) 40, 108, 574, 785
MwoI GCNNNNNNNGC 2 cut(s) 182, 323
NaeI GCCGGC 1 cut(s) 1204
NarI GGCGCC 1 cut(s) 1200
NciI CCSGG 1 cut(s) 1221
NcoI CCATGG 3 cut(s) 193, 255, 353
NdeI CATATG 1 cut(s) 1109
NdeII GATC 3 cut(s) 331, 357, 606
NgoMIV GCCGGC 1 cut(s) 1202
NlaIII CATG 8 cut(s) 197, 259, 284, 357, 920, 1086, 1321, 1327
NlaIV GGNNCC 3 cut(s) 359, 1045, 1201
NmuCI GTSAC 1 cut(s) 152
PdiI GCCGGC 1 cut(s) 1204
PdmI GAANNNNTTC 3 cut(s) 975, 1127, 1188
PfeI GAWTC 4 cut(s) 689, 926, 1022, 1274
PfoI TCCNGGA 1 cut(s) 1219
PkrI GCNGC 1 cut(s) 493
PluTI GGCGCC 1 cut(s) 1203
Psp124BI GAGCTC 2 cut(s) 756, 849
Psp6I CCWGG 4 cut(s) 38, 106, 572, 783
PspGI CCWGG 4 cut(s) 38, 106, 572, 783
PspN4I GGNNCC 3 cut(s) 359, 1045, 1201
PspPI GGNCC 3 cut(s) 110, 197, 1086
PstI CTGCAG 1 cut(s) 994
PstNI CAGNNNCTG 1 cut(s) 311
PsuI RGATCY 1 cut(s) 357
RsaI GTAC 1 cut(s) 1341
RsaNI GTAC 1 cut(s) 1340
RseI CAYNNNNRTG 2 cut(s) 829, 1322
SacI GAGCTC 2 cut(s) 756, 849
SaqAI TTAA 4 cut(s) 891, 966, 1077, 1253
SatI GCNGC 1 cut(s) 492
Sau3AI GATC 3 cut(s) 331, 357, 606
Sau96I GGNCC 3 cut(s) 110, 197, 1086
ScrFI CCNGG 5 cut(s) 40, 108, 574, 785, 1221
SduI GDGCHC 4 cut(s) 328, 756, 849, 1066
SexAI ACCWGGT 1 cut(s) 106
SfaNI GCATC 2 cut(s) 304, 420
SfcI CTRYAG 1 cut(s) 990
SfoI GGCGCC 1 cut(s) 1201
SinI GGWCC 1 cut(s) 110
SmiMI CAYNNNNRTG 2 cut(s) 829, 1322
Sse9I AATT 8 cut(s) 69, 511, 528, 881, 900, 1123, 1177, 1302
SsiI CCGC 2 cut(s) 119, 553
SspDI GGCGCC 1 cut(s) 1199
SspI AATATT 1 cut(s) 601
SspMI CTAG 2 cut(s) 939, 1349
SstI GAGCTC 2 cut(s) 756, 849
StyD4I CCNGG 5 cut(s) 38, 106, 572, 783, 1219
StyI CCWWGG 3 cut(s) 193, 255, 353
TaaI ACNGT 4 cut(s) 89, 307, 746, 1051
TaqI TCGA 7 cut(s) 301, 322, 536, 609, 683, 1161, 1272
TasI AATT 8 cut(s) 69, 511, 528, 881, 900, 1123, 1177, 1302
TatI WGTACW 1 cut(s) 1339
TfiI GAWTC 4 cut(s) 689, 926, 1022, 1274
Tru1I TTAA 4 cut(s) 891, 966, 1077, 1253
Tru9I TTAA 4 cut(s) 891, 966, 1077, 1253
TscAI CASTG 1 cut(s) 751
TseFI GTSAC 1 cut(s) 152
TseI GCWGC 1 cut(s) 491
Tsp45I GTSAC 1 cut(s) 152
TspDTI ATGAA 6 cut(s) 17, 237, 769, 807, 1116, 1334
TspGWI ACGGA 1 cut(s) 465
TspRI CASTG 1 cut(s) 751
VneI GTGCAC 1 cut(s) 1062
VpaK11BI GGWCC 1 cut(s) 110
XapI RAATTY 2 cut(s) 1123, 1177
XmnI GAANNNNTTC 3 cut(s) 975, 1127, 1188
XspI CTAG 2 cut(s) 939, 1349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.