Rmu_sc0002039.1_g000017

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002039.1
OG0001080
Physical Location & Seq
Reverse (-)
69885 .. 71740
1856 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002039.1_g000017.1.cds

Sequence Viewer

Length: 1497 bp
atgaacttctggagtggtttcgtttaccttatcctcacctggacatttatccaagccctcctgtactcaatttcaagagccaaaaacagttccaaaaagcttccaccaggtccaaaaccgcttccaatcctcggaaaccttctcctacttggtgacagacctcacaaatctcttgccgaacttgccaaaatccatggccctttgatgtccctaaaacttggacaagtaacctccatagttgtttcttcatcagccatggctaaacgagtcctccaaacccatgaccaatacttgtccaatcgaacagtccccgatgccattcgagcccttgatcaccacactgttggcttgccatggatcccagtctctcccctttggagaaaccaaagaaaaatatgcaacactcagctatttgccaacaaaatgcttgatgctaaccaaaacttgcgacggaagaaagtggagcaactccttgaattagtccataaaagcagcctgagtggggaagcagttgactttggtagggcagcttttactacgacactcaatttgctgtctaatacaattttttcgattgatttagcagacccgagttccaaaatggccagggagttcaaggagatggtgcataatattatgatcgaggctggaaaaccaaacttgggggactgttttcctttgcttaggaagattgatcctaatggcagaaggaggagaatgacaaagtattttggaaagataatagatttagttgaaacaatagttcagcagaggttggagctgagaaaatcgactgaatctgcaacaaagaacgatgtgttggatacccttctcactattacagaggaaaacagtgaggagctcagcaaaaatcaactttatcatttcatcctggtcaggtcagacacagcttcatccacattccaatgggcaatggcagagctcttgcacaaccctgaagttctctcaaaagcacaattagagcttaacgaagtaattggcaaaggcaatcatgttgaggaatcagacattactagactaccttacttgcaagccattattaaagaaacatttcgtatgcaccctgcagttcctttgttacttccccgaaaagccgaatcagatgtagagattgaaggctccacagtcccgaagggtgcacaagtgcttgttaacgcatgggccattggcagagacccaagcatatgggatgacccgaattcattcaagccagagaggttcttggggtctctactcgatgttagaggccggaattttgaacttattccatttggctccggtaggagaatatgtccgggattgccattggcaatgagaatgttgcacttaatgttgggttctcttatccattcctttgtttggaagcttgaagatggagttacaccagagaacatgaacatggatgataagtttgtactcaccctagagatggccaaacccttgagagctatccctatccctatccctatcccttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

498

Amino Acids

56.13

Weight (kDa)

9.29

Isoelectric Point (pI)

38.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 119
AclWI GGATC 3 cut(s) 352, 365, 689
AcoI YGGCCR 2 cut(s) 603, 1452
AcsI RAATTY 2 cut(s) 1219, 1273
AcuI CTGAAG 1 cut(s) 978
AfaI GTAC 2 cut(s) 65, 1437
AfiI CCNNNNNNNGG 5 cut(s) 131, 502, 662, 1380, 1450
AgsI TTSAA 8 cut(s) 75, 476, 616, 755, 1136, 1228, 1280, 1391
AjnI CCWGG 4 cut(s) 38, 106, 605, 891
AjuI GAANNNNNNNTTGG 2 cut(s) 803, 835
Alw21I GWGCWC 3 cut(s) 864, 945, 1162
Alw26I GTCTC 3 cut(s) 370, 1188, 1254
Alw44I GTGCAC 1 cut(s) 1158
AlwI GGATC 3 cut(s) 352, 365, 689
Ama87I CYCGRG 1 cut(s) 589
AoxI GGCC 5 cut(s) 196, 603, 1182, 1267, 1452
ApaLI GTGCAC 1 cut(s) 1158
ApeKI GCWGC 2 cut(s) 492, 527
ApoI RAATTY 2 cut(s) 1219, 1273
ArsI GACNNNNNNTTYG 2 cut(s) 532, 564
Asp700I GAANNNNTTC 3 cut(s) 1071, 1223, 1284
AspS9I GGNCC 3 cut(s) 110, 197, 1182
AsuC2I CCSGG 1 cut(s) 1317
AsuHPI GGTGA 4 cut(s) 28, 164, 326, 1432
AvaI CYCGRG 1 cut(s) 589
AvaII GGWCC 1 cut(s) 110
BaeGI GKGCMC 1 cut(s) 1162
BalI TGGCCA 2 cut(s) 605, 1454
BamHI GGATCC 1 cut(s) 357
BanII GRGCYC 3 cut(s) 328, 864, 945
Bbv12I GWGCWC 3 cut(s) 864, 945, 1162
BbvI GCAGC 2 cut(s) 504, 539
BccI CCATC 3 cut(s) 616, 1388, 1444
BciT130I CCWGG 4 cut(s) 40, 108, 607, 893
BciVI GTATCC 1 cut(s) 817
BclI TGATCA 1 cut(s) 331
BcnI CCSGG 1 cut(s) 1317
BcoDI GTCTC 3 cut(s) 370, 1188, 1254
BfaI CTAG 2 cut(s) 1035, 1445
BfmI CTRYAG 1 cut(s) 1086
BfuI GTATCC 1 cut(s) 817
BisI GCNGC 2 cut(s) 493, 528
BlpI GCTNAGC 1 cut(s) 863
BlsI GCNGC 2 cut(s) 494, 529
Bme1390I CCNGG 5 cut(s) 40, 108, 607, 893, 1317
Bme18I GGWCC 1 cut(s) 110
BmeT110I CYCGRG 1 cut(s) 589
BmgT120I GGNCC 3 cut(s) 110, 197, 1182
BmiI GGNNCC 3 cut(s) 359, 1141, 1297
BmrFI CCNGG 5 cut(s) 40, 108, 607, 893, 1317
BmrI ACTGGG 1 cut(s) 356
BmsI GCATC 2 cut(s) 304, 421
BmuI ACTGGG 1 cut(s) 356
BpmI CTGGAG 1 cut(s) 31
Bpu10I CCTNAGC 1 cut(s) 683
Bpu1102I GCTNAGC 1 cut(s) 863
BpuEI CTTGAG 1 cut(s) 1483
BpuMI CCSGG 1 cut(s) 1317
BsaI GGTCTC 2 cut(s) 1188, 1254
BsaJI CCNNGG 5 cut(s) 130, 193, 255, 353, 606
BsaWI WCCGGW 1 cut(s) 1298
BsaXI ACNNNNNCTCC 4 cut(s) 255, 285, 1297, 1327
Bsc4I CCNNNNNNNGG 5 cut(s) 131, 502, 662, 1380, 1450
Bse1I ACTGG 1 cut(s) 362
Bse3DI GCAATG 2 cut(s) 939, 1338
BseBI CCWGG 4 cut(s) 40, 108, 607, 893
BseDI CCNNGG 5 cut(s) 130, 193, 255, 353, 606
BseGI GGATG 4 cut(s) 888, 914, 1216, 1429
BseLI CCNNNNNNNGG 5 cut(s) 131, 502, 662, 1380, 1450
BseMI GCAATG 2 cut(s) 939, 1338
BseMII CTCAG 4 cut(s) 419, 488, 773, 877
BseNI ACTGG 1 cut(s) 362
BseRI GAGGAG 2 cut(s) 727, 872
BseSI GKGCMC 1 cut(s) 1162
BseXI GCAGC 2 cut(s) 504, 539
BshFI GGCC 5 cut(s) 198, 605, 1184, 1269, 1454
BsiHKAI GWGCWC 3 cut(s) 864, 945, 1162
BsiHKCI CYCGRG 1 cut(s) 589
BsiSI CCGG 3 cut(s) 1270, 1299, 1316
BslFI GGGAC 4 cut(s) 193, 293, 680, 1133
BslI CCNNNNNNNGG 5 cut(s) 131, 502, 662, 1380, 1450
BsmAI GTCTC 3 cut(s) 370, 1188, 1254
BsmFI GGGAC 4 cut(s) 193, 293, 680, 1133
BsnI GGCC 5 cut(s) 198, 605, 1184, 1269, 1454
Bso31I GGTCTC 2 cut(s) 1188, 1254
BsoBI CYCGRG 1 cut(s) 589
Bsp1286I GDGCHC 4 cut(s) 328, 864, 945, 1162
Bsp143I GATC 4 cut(s) 331, 357, 639, 694
Bsp1720I GCTNAGC 1 cut(s) 863
Bsp19I CCATGG 3 cut(s) 193, 255, 353
BspACI CCGC 1 cut(s) 119
BspANI GGCC 5 cut(s) 198, 605, 1184, 1269, 1454
BspCNI CTCAG 4 cut(s) 418, 489, 774, 876
BspLI GGNNCC 3 cut(s) 359, 1141, 1297
BspMAI CTGCAG 1 cut(s) 1090
BspPI GGATC 3 cut(s) 352, 365, 689
BspTNI GGTCTC 2 cut(s) 1188, 1254
BsrDI GCAATG 2 cut(s) 939, 1338
BsrI ACTGG 1 cut(s) 362
BssECI CCNNGG 5 cut(s) 130, 193, 255, 353, 606
BssMI GATC 4 cut(s) 331, 357, 639, 694
BssT1I CCWWGG 3 cut(s) 193, 255, 353
Bst2UI CCWGG 4 cut(s) 40, 108, 607, 893
Bst4CI ACNGT 6 cut(s) 89, 307, 343, 671, 854, 1147
BstC8I GCNNGC 2 cut(s) 350, 1053
BstDEI CTNAG 6 cut(s) 405, 497, 683, 782, 863, 1494
BstDSI CCRYGG 3 cut(s) 193, 255, 353
BstF5I GGATG 4 cut(s) 888, 914, 1216, 1429
BstKTI GATC 4 cut(s) 334, 360, 642, 697
BstMAI GTCTC 3 cut(s) 370, 1188, 1254
BstMBI GATC 4 cut(s) 331, 357, 639, 694
BstMWI GCNNNNNNNGC 2 cut(s) 182, 323
BstNI CCWGG 4 cut(s) 40, 108, 607, 893
BstSCI CCNGG 5 cut(s) 38, 106, 605, 891, 1315
BstSFI CTRYAG 1 cut(s) 1086
BstSLI GKGCMC 1 cut(s) 1162
BstV1I GCAGC 2 cut(s) 504, 539
BstX2I RGATCY 1 cut(s) 357
BstXI CCANNNNNNTGG 2 cut(s) 344, 1206
BstYI RGATCY 1 cut(s) 357
BsuI GTATCC 1 cut(s) 817
BsuRI GGCC 5 cut(s) 198, 605, 1184, 1269, 1454
BtgI CCRYGG 3 cut(s) 193, 255, 353
BtsCI GGATG 4 cut(s) 888, 914, 1216, 1429
BtsIMutI CAGTG 2 cut(s) 339, 859
Cac8I GCNNGC 2 cut(s) 350, 1053
Cfr13I GGNCC 3 cut(s) 110, 197, 1182
CsiI ACCWGGT 1 cut(s) 106
Csp6I GTAC 2 cut(s) 64, 1436
CviAII CATG 8 cut(s) 194, 256, 281, 354, 1013, 1179, 1414, 1420
CviQI GTAC 2 cut(s) 64, 1436
DdeI CTNAG 6 cut(s) 405, 497, 683, 782, 863, 1494
DpnI GATC 4 cut(s) 333, 359, 641, 696
DpnII GATC 4 cut(s) 331, 357, 639, 694
EaeI YGGCCR 2 cut(s) 603, 1452
Ecl136II GAGCTC 2 cut(s) 862, 943
Eco130I CCWWGG 3 cut(s) 193, 255, 353
Eco24I GRGCYC 3 cut(s) 328, 864, 945
Eco31I GGTCTC 2 cut(s) 1188, 1254
Eco47I GGWCC 1 cut(s) 110
Eco53kI GAGCTC 2 cut(s) 862, 943
Eco57I CTGAAG 1 cut(s) 978
Eco88I CYCGRG 1 cut(s) 589
EcoICRI GAGCTC 2 cut(s) 862, 943
EcoRI GAATTC 1 cut(s) 1219
EcoRII CCWGG 4 cut(s) 38, 106, 605, 891
EcoT14I CCWWGG 3 cut(s) 193, 255, 353
EcoT38I GRGCYC 3 cut(s) 328, 864, 945
ErhI CCWWGG 3 cut(s) 193, 255, 353
FaeI CATG 8 cut(s) 197, 259, 284, 357, 1016, 1182, 1417, 1423
FaqI GGGAC 4 cut(s) 193, 293, 680, 1133
FatI CATG 8 cut(s) 193, 255, 280, 353, 1012, 1178, 1413, 1419
FauNDI CATATG 1 cut(s) 1205
FbaI TGATCA 1 cut(s) 331
Fnu4HI GCNGC 2 cut(s) 493, 528
FokI GGATG 4 cut(s) 875, 901, 1223, 1436
FriOI GRGCYC 3 cut(s) 328, 864, 945
Fsp4HI GCNGC 2 cut(s) 493, 528
FspBI CTAG 2 cut(s) 1035, 1445
GluI GCNGC 2 cut(s) 493, 528
GsuI CTGGAG 1 cut(s) 31
HaeIII GGCC 5 cut(s) 198, 605, 1184, 1269, 1454
HapII CCGG 3 cut(s) 1270, 1299, 1316
Hin1II CATG 8 cut(s) 197, 259, 284, 357, 1016, 1182, 1417, 1423
HincII GTYRAC 2 cut(s) 514, 1174
HindII GTYRAC 2 cut(s) 514, 1174
HindIII AAGCTT 2 cut(s) 98, 1385
HinfI GANTC 4 cut(s) 267, 797, 1022, 1118
HpaI GTTAAC 1 cut(s) 1174
HpaII CCGG 3 cut(s) 1270, 1299, 1316
HphI GGTGA 4 cut(s) 28, 164, 326, 1432
Hpy166II GTNNAC 4 cut(s) 25, 514, 1160, 1174
Hpy188I TCNGA 4 cut(s) 134, 904, 1027, 1123
Hpy188III TCNNGA 3 cut(s) 10, 75, 1150
Hpy8I GTNNAC 4 cut(s) 25, 514, 1160, 1174
Hpy99I CGWCG 1 cut(s) 453
HpyAV CCTTC 5 cut(s) 149, 702, 839, 1130, 1147
HpyCH4III ACNGT 6 cut(s) 89, 307, 343, 671, 854, 1147
HpyCH4V TGCA 9 cut(s) 399, 628, 803, 949, 1051, 1081, 1088, 1160, 1345
HpyF10VI GCNNNNNNNGC 2 cut(s) 182, 323
HpyF3I CTNAG 6 cut(s) 405, 497, 683, 782, 863, 1494
Hsp92II CATG 8 cut(s) 197, 259, 284, 357, 1016, 1182, 1417, 1423
Ksp22I TGATCA 1 cut(s) 331
KspAI GTTAAC 1 cut(s) 1174
Kzo9I GATC 4 cut(s) 331, 357, 639, 694
LmnI GCTCC 5 cut(s) 463, 778, 859, 1145, 1301
Lsp1109I GCAGC 2 cut(s) 504, 539
LweI GCATC 2 cut(s) 304, 421
MabI ACCWGGT 1 cut(s) 106
MaeI CTAG 2 cut(s) 1035, 1445
MaeIII GTNAC 4 cut(s) 152, 226, 1098, 1399
MalI GATC 4 cut(s) 333, 359, 641, 696
MboI GATC 4 cut(s) 331, 357, 639, 694
MboII GAAGA 4 cut(s) 237, 466, 700, 1403
MflI RGATCY 1 cut(s) 357
MhlI GDGCHC 4 cut(s) 328, 864, 945, 1162
MlsI TGGCCA 2 cut(s) 605, 1454
MluCI AATT 8 cut(s) 69, 476, 547, 564, 977, 996, 1219, 1273
MluNI TGGCCA 2 cut(s) 605, 1454
MlyI GAGTC 1 cut(s) 276
MmeI TCCRAC 2 cut(s) 756, 801
Mox20I TGGCCA 2 cut(s) 605, 1454
MroXI GAANNNNTTC 3 cut(s) 1071, 1223, 1284
MscI TGGCCA 2 cut(s) 605, 1454
MseI TTAA 4 cut(s) 987, 1062, 1173, 1349
MslI CAYNNNNRTG 2 cut(s) 925, 1418
Msp20I TGGCCA 2 cut(s) 605, 1454
MspI CCGG 3 cut(s) 1270, 1299, 1316
MspR9I CCNGG 5 cut(s) 40, 108, 607, 893, 1317
MvaI CCWGG 4 cut(s) 40, 108, 607, 893
MwoI GCNNNNNNNGC 2 cut(s) 182, 323
NciI CCSGG 1 cut(s) 1317
NcoI CCATGG 3 cut(s) 193, 255, 353
NdeI CATATG 1 cut(s) 1205
NdeII GATC 4 cut(s) 331, 357, 639, 694
NlaIII CATG 8 cut(s) 197, 259, 284, 357, 1016, 1182, 1417, 1423
NlaIV GGNNCC 3 cut(s) 359, 1141, 1297
NmuCI GTSAC 1 cut(s) 152
PdmI GAANNNNTTC 3 cut(s) 1071, 1223, 1284
PfeI GAWTC 3 cut(s) 797, 1022, 1118
PfoI TCCNGGA 1 cut(s) 1315
PkrI GCNGC 2 cut(s) 494, 529
PleI GAGTC 1 cut(s) 275
PpsI GAGTC 1 cut(s) 275
Psp124BI GAGCTC 2 cut(s) 864, 945
Psp6I CCWGG 4 cut(s) 38, 106, 605, 891
PspGI CCWGG 4 cut(s) 38, 106, 605, 891
PspN4I GGNNCC 3 cut(s) 359, 1141, 1297
PspPI GGNCC 3 cut(s) 110, 197, 1182
PstI CTGCAG 1 cut(s) 1090
PsuI RGATCY 1 cut(s) 357
RsaI GTAC 2 cut(s) 65, 1437
RsaNI GTAC 2 cut(s) 64, 1436
RseI CAYNNNNRTG 2 cut(s) 925, 1418
SacI GAGCTC 2 cut(s) 864, 945
SaqAI TTAA 4 cut(s) 987, 1062, 1173, 1349
SatI GCNGC 2 cut(s) 493, 528
Sau3AI GATC 4 cut(s) 331, 357, 639, 694
Sau96I GGNCC 3 cut(s) 110, 197, 1182
SchI GAGTC 1 cut(s) 276
ScrFI CCNGG 5 cut(s) 40, 108, 607, 893, 1317
SduI GDGCHC 4 cut(s) 328, 864, 945, 1162
SexAI ACCWGGT 1 cut(s) 106
SfaNI GCATC 2 cut(s) 304, 421
SfcI CTRYAG 1 cut(s) 1086
SinI GGWCC 1 cut(s) 110
SmiMI CAYNNNNRTG 2 cut(s) 925, 1418
SmlI CTYRAG 1 cut(s) 1462
SmoI CTYRAG 1 cut(s) 1462
Sse9I AATT 8 cut(s) 69, 476, 547, 564, 977, 996, 1219, 1273
SsiI CCGC 1 cut(s) 119
SspI AATATT 1 cut(s) 634
SspMI CTAG 2 cut(s) 1035, 1445
SstI GAGCTC 2 cut(s) 864, 945
StyD4I CCNGG 5 cut(s) 38, 106, 605, 891, 1315
StyI CCWWGG 3 cut(s) 193, 255, 353
TaaI ACNGT 6 cut(s) 89, 307, 343, 671, 854, 1147
TaqI TCGA 6 cut(s) 301, 322, 572, 642, 791, 1257
TasI AATT 8 cut(s) 69, 476, 547, 564, 977, 996, 1219, 1273
TatI WGTACW 2 cut(s) 63, 1435
TfiI GAWTC 3 cut(s) 797, 1022, 1118
Tru1I TTAA 4 cut(s) 987, 1062, 1173, 1349
Tru9I TTAA 4 cut(s) 987, 1062, 1173, 1349
TscAI CASTG 2 cut(s) 346, 859
TseFI GTSAC 1 cut(s) 152
TseI GCWGC 2 cut(s) 492, 527
Tsp45I GTSAC 1 cut(s) 152
TspDTI ATGAA 6 cut(s) 17, 237, 877, 903, 1212, 1430
TspGWI ACGGA 1 cut(s) 466
TspRI CASTG 2 cut(s) 346, 859
VneI GTGCAC 1 cut(s) 1158
VpaK11BI GGWCC 1 cut(s) 110
XapI RAATTY 2 cut(s) 1219, 1273
XmnI GAANNNNTTC 3 cut(s) 1071, 1223, 1284
XspI CTAG 2 cut(s) 1035, 1445
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.