pycom13g09800

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0001080
Physical Location & Seq
Forward (+)
6547990 .. 6549644
1655 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g09800.2

Sequence Viewer

Length: 1509 bp
ATGGATTTCTTGAGTTATTGTATCATAATCCCATGTCTTTTCTCTCTCTTGTATTTCTTAGTTCAAGCTCTCAGATCCAATCCCAAAAGGCTTCTTCTTCCACCTGGACCAAAGCCATTTCCCATCATTGGCAATCTCTTGGAGCTCGGCAACAAACCCCATCTCTCTCTCACTAACCTTTCACGACGATACGGCCCCATTATTTCTTTGCAACTTGGACAAGTAACAACGGTTGTAGTTTCTTCATCAACCGTGGCAAAGGAGGTCCTCCGAACCCACGACCAGTTCTTGTGCAACCGAACCGTCCCTGAAGCAATCCAAGCTTGCGATCTCCGCCAGGACAGCTTGCCCTGGATACCGGTGTCAGAGAAATGGAGAAACCTCCGTAAAATATGCAATAACCAATTGTTTGCAACGAAAGTCCTAGACATCAACCAAGCCAACCGTCACCTGAAAGTGCAGGAGCTCATCGCCGATGTCAATGAAAGCGTTGTGAAATGTAAGGCGGTAGAAATTGGGAGGGTTGCTTTTAAGACGACGCTCAATCTGCTGTCACGTACTGTTTTCTCAGTCGATTTAGCTGACCCGAGCAGTGAGATGGTCAGAGAGTTCAAGGAGATTGTGTGGGGTTTGATGGAAGAGGCAGGGAAGCCAAACTTGGCGGACTATTTTCCTCTGCTTAGGAAACTTGACCCCCAAGGCATTCGACAGCGCATTATCAAACATTTCCTCAAGATTGATTCGCTTTTTGATCGAATGATTACGCAAAGGTTAGAATTGAGAAAATCAAACTATTATGTCACAAGTAATGATATGTTGGATTCTCTCTTGGACATCAGTGAAGAAAGCAATGAGGATATGGACAAGCTCTTGATTGAACATCTGCTTTTGGCTCTATTTGTTGCGGGCACGGATACAACTTCAGCCACACTGGAATGGGCAATGGCTGAACTACTACGTAACCCGGAAAAACTGTCGAAAGCACAAGAGGAACTAGAGCAAGTCATTGGCAAAGGAAAACCAGTTGAGGAATCAGACATTGCTCGACTCCCTTACTTACAAGCAATAATCAAAGAGACCTTCCGGTTGCATCCGGCTACTCCATTACTACTCCCTCGAAAAGCCGAACAAGACGTGGAAATTTGCGGGTACATTGTCCCAAAGGGTGCACAAGTGCTGGTCAATGCATGGGCTATAGGAAGAGACCCCTGCATTTGGAACAACCCGACCTCATTTGCACCGGAGAGGTTTATGGGATTAGATGATCAAATCGATGTTTTAGGCAAGAATTTTGAGCTCATTCCCTTTGGTGGTGGGAGGAGAATATGTCCGGGGATGCTATTGGCAATACGGATGCTAAACTTGATGTTGGGTTCACTTATTAACTCATTTGATTGGAAGCTTGAAGATGGAGTTATACCAGAGAACATGAACATGGAGGAGAAGTTTGGCCTCACCTTACAGATGGCTCATCCTCTAAGAGCTGTACCAAAAGTCATTCGAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

503

Amino Acids

56.89

Weight (kDa)

6.69

Isoelectric Point (pI)

34.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 5 cut(s) 334, 506, 662, 905, 1146
AclWI GGATC 1 cut(s) 69
AcsI RAATTY 3 cut(s) 1140, 1288, 1503
AcuI CTGAAG 2 cut(s) 330, 906
AfaI GTAC 3 cut(s) 559, 1151, 1488
AfiI CCNNNNNNNGG 3 cut(s) 128, 1215, 1310
AgeI ACCGGT 1 cut(s) 358
AgsI TTSAA 4 cut(s) 65, 613, 878, 1406
AjiI CACGTC 1 cut(s) 1135
AjnI CCWGG 3 cut(s) 103, 336, 350
AjuI GAANNNNNNNTTGG 2 cut(s) 641, 673
Alw21I GWGCWC 4 cut(s) 147, 468, 1171, 1299
Alw26I GTCTC 2 cut(s) 1070, 1197
Alw44I GTGCAC 1 cut(s) 1167
AlwI GGATC 1 cut(s) 69
Ama87I CYCGRG 1 cut(s) 586
AoxI GGCC 2 cut(s) 193, 1450
ApaLI GTGCAC 1 cut(s) 1167
ApoI RAATTY 3 cut(s) 1140, 1288, 1503
AsiGI ACCGGT 1 cut(s) 358
AspLEI GCGC 1 cut(s) 714
AspS9I GGNCC 3 cut(s) 107, 194, 265
AsuC2I CCSGG 2 cut(s) 965, 1332
AsuHPI GGTGA 2 cut(s) 440, 1447
AsuII TTCGAA 1 cut(s) 1501
AvaI CYCGRG 1 cut(s) 586
AvaII GGWCC 2 cut(s) 107, 265
BaeGI GKGCMC 2 cut(s) 911, 1171
BaeI ACNNNNGTAYC 2 cut(s) 347, 380
BanII GRGCYC 3 cut(s) 147, 468, 1299
Bbv12I GWGCWC 4 cut(s) 147, 468, 1171, 1299
BccI CCATC 6 cut(s) 131, 168, 592, 628, 1403, 1459
BceAI ACGGC 1 cut(s) 208
BciT130I CCWGG 3 cut(s) 105, 338, 352
BciVI GTATCC 2 cut(s) 348, 907
BclI TGATCA 1 cut(s) 1264
BcnI CCSGG 2 cut(s) 965, 1332
BcoDI GTCTC 2 cut(s) 1070, 1197
BfaI CTAG 2 cut(s) 425, 995
BfmI CTRYAG 1 cut(s) 1194
BfuI GTATCC 2 cut(s) 348, 907
Bme1390I CCNGG 5 cut(s) 105, 338, 352, 965, 1332
Bme18I GGWCC 2 cut(s) 107, 265
BmeT110I CYCGRG 1 cut(s) 586
BmgBI CACGTC 1 cut(s) 1135
BmgT120I GGNCC 3 cut(s) 107, 194, 265
BmiI GGNNCC 1 cut(s) 196
BmrFI CCNGG 5 cut(s) 105, 338, 352, 965, 1332
BmsI GCATC 3 cut(s) 1099, 1326, 1344
Bpu10I CCTNAGC 1 cut(s) 680
Bpu14I TTCGAA 1 cut(s) 1501
BpuEI CTTGAG 2 cut(s) 31, 716
BpuMI CCSGG 2 cut(s) 965, 1332
Bsa29I ATCGAT 1 cut(s) 1272
BsaAI YACGTR 2 cut(s) 557, 959
BsaI GGTCTC 2 cut(s) 1070, 1197
BsaJI CCNNGG 4 cut(s) 252, 350, 697, 1331
BsaWI WCCGGW 3 cut(s) 358, 1083, 1240
BsaXI ACNNNNNCTCC 6 cut(s) 608, 638, 1312, 1342, 1430, 1460
Bsc4I CCNNNNNNNGG 3 cut(s) 128, 1215, 1310
Bse118I RCCGGY 1 cut(s) 358
Bse1I ACTGG 3 cut(s) 283, 936, 1022
Bse3DI GCAATG 3 cut(s) 856, 948, 1038
BseBI CCWGG 3 cut(s) 105, 338, 352
BseCI ATCGAT 1 cut(s) 1272
BseDI CCNNGG 4 cut(s) 252, 350, 697, 1331
BseGI GGATG 4 cut(s) 1090, 1341, 1359, 1471
BseLI CCNNNNNNNGG 3 cut(s) 128, 1215, 1310
BseMI GCAATG 3 cut(s) 856, 948, 1038
BseMII CTCAG 2 cut(s) 85, 582
BseNI ACTGG 3 cut(s) 283, 936, 1022
BseRI GAGGAG 2 cut(s) 1333, 1454
BseSI GKGCMC 2 cut(s) 911, 1171
BsgI GTGCAG 1 cut(s) 479
BshFI GGCC 2 cut(s) 195, 1452
BshTI ACCGGT 1 cut(s) 358
BshVI ATCGAT 1 cut(s) 1272
BsiHKAI GWGCWC 4 cut(s) 147, 468, 1171, 1299
BsiHKCI CYCGRG 1 cut(s) 586
BsiSI CCGG 6 cut(s) 359, 965, 1084, 1094, 1241, 1331
BslFI GGGAC 2 cut(s) 290, 1142
BslI CCNNNNNNNGG 3 cut(s) 128, 1215, 1310
BsmAI GTCTC 2 cut(s) 1070, 1197
BsmFI GGGAC 2 cut(s) 290, 1142
BsmI GAATGC 1 cut(s) 702
BsnI GGCC 2 cut(s) 195, 1452
Bso31I GGTCTC 2 cut(s) 1070, 1197
BsoBI CYCGRG 1 cut(s) 586
Bsp119I TTCGAA 1 cut(s) 1501
Bsp1286I GDGCHC 5 cut(s) 147, 468, 911, 1171, 1299
Bsp143I GATC 4 cut(s) 74, 328, 751, 1264
BspACI CCGC 5 cut(s) 334, 506, 662, 905, 1146
BspANI GGCC 2 cut(s) 195, 1452
BspCNI CTCAG 2 cut(s) 84, 581
BspDI ATCGAT 1 cut(s) 1272
BspLI GGNNCC 1 cut(s) 196
BspPI GGATC 1 cut(s) 69
BspT104I TTCGAA 1 cut(s) 1501
BspTNI GGTCTC 2 cut(s) 1070, 1197
BsrDI GCAATG 3 cut(s) 856, 948, 1038
BsrFI RCCGGY 1 cut(s) 358
BsrI ACTGG 3 cut(s) 283, 936, 1022
BssAI RCCGGY 1 cut(s) 358
BssECI CCNNGG 4 cut(s) 252, 350, 697, 1331
BssMI GATC 4 cut(s) 74, 328, 751, 1264
BssT1I CCWWGG 1 cut(s) 697
Bst2UI CCWGG 3 cut(s) 105, 338, 352
Bst4CI ACNGT 6 cut(s) 232, 253, 304, 446, 562, 975
Bst6I CTCTTC 2 cut(s) 633, 1195
BstBAI YACGTR 2 cut(s) 557, 959
BstBI TTCGAA 1 cut(s) 1501
BstC8I GCNNGC 3 cut(s) 325, 347, 907
BstDEI CTNAG 5 cut(s) 58, 71, 568, 680, 1478
BstDSI CCRYGG 1 cut(s) 252
BstF5I GGATG 4 cut(s) 1090, 1341, 1359, 1471
BstHHI GCGC 1 cut(s) 714
BstKTI GATC 4 cut(s) 77, 331, 754, 1267
BstMAI GTCTC 2 cut(s) 1070, 1197
BstMBI GATC 4 cut(s) 74, 328, 751, 1264
BstMWI GCNNNNNNNGC 4 cut(s) 320, 333, 342, 547
BstNI CCWGG 3 cut(s) 105, 338, 352
BstSCI CCNGG 5 cut(s) 103, 336, 350, 963, 1330
BstSFI CTRYAG 1 cut(s) 1194
BstSLI GKGCMC 2 cut(s) 911, 1171
BstSNI TACGTA 1 cut(s) 959
BstX2I RGATCY 1 cut(s) 74
BstYI RGATCY 1 cut(s) 74
Bsu15I ATCGAT 1 cut(s) 1272
BsuI GTATCC 2 cut(s) 348, 907
BsuRI GGCC 2 cut(s) 195, 1452
BsuTUI ATCGAT 1 cut(s) 1272
BtgI CCRYGG 1 cut(s) 252
BtgZI GCGATG 1 cut(s) 454
BtrI CACGTC 1 cut(s) 1135
BtsCI GGATG 4 cut(s) 1090, 1341, 1359, 1471
BtsI GCAGTG 1 cut(s) 598
BtsIMutI CAGTG 3 cut(s) 598, 844, 929
Cac8I GCNNGC 3 cut(s) 325, 347, 907
CfoI GCGC 1 cut(s) 714
Cfr10I RCCGGY 1 cut(s) 358
Cfr13I GGNCC 3 cut(s) 107, 194, 265
ClaI ATCGAT 1 cut(s) 1272
CseI GACGC 1 cut(s) 547
Csp6I GTAC 3 cut(s) 558, 1150, 1487
CspAI ACCGGT 1 cut(s) 358
CviAII CATG 4 cut(s) 33, 1188, 1429, 1435
CviQI GTAC 3 cut(s) 558, 1150, 1487
DdeI CTNAG 5 cut(s) 58, 71, 568, 680, 1478
DpnI GATC 4 cut(s) 76, 330, 753, 1266
DpnII GATC 4 cut(s) 74, 328, 751, 1264
Eam1104I CTCTTC 2 cut(s) 633, 1195
EarI CTCTTC 2 cut(s) 633, 1195
EciI GGCGGA 2 cut(s) 323, 677
Ecl136II GAGCTC 3 cut(s) 145, 466, 1297
Eco105I TACGTA 1 cut(s) 959
Eco130I CCWWGG 1 cut(s) 697
Eco24I GRGCYC 3 cut(s) 147, 468, 1299
Eco31I GGTCTC 2 cut(s) 1070, 1197
Eco47I GGWCC 2 cut(s) 107, 265
Eco53kI GAGCTC 3 cut(s) 145, 466, 1297
Eco57I CTGAAG 2 cut(s) 330, 906
Eco88I CYCGRG 1 cut(s) 586
EcoICRI GAGCTC 3 cut(s) 145, 466, 1297
EcoO109I RGGNCCY 1 cut(s) 265
EcoRII CCWGG 3 cut(s) 103, 336, 350
EcoT14I CCWWGG 1 cut(s) 697
EcoT22I ATGCAT 1 cut(s) 1189
EcoT38I GRGCYC 3 cut(s) 147, 468, 1299
ErhI CCWWGG 1 cut(s) 697
FaeI CATG 4 cut(s) 36, 1191, 1432, 1438
FalI AAGNNNNNCTT 2 cut(s) 641, 673
FaqI GGGAC 2 cut(s) 290, 1142
FatI CATG 4 cut(s) 32, 1187, 1428, 1434
FauI CCCGC 2 cut(s) 898, 1139
FbaI TGATCA 1 cut(s) 1264
FokI GGATG 4 cut(s) 1077, 1348, 1366, 1458
FriOI GRGCYC 3 cut(s) 147, 468, 1299
FspBI CTAG 2 cut(s) 425, 995
GlaI GCGC 1 cut(s) 713
HaeIII GGCC 2 cut(s) 195, 1452
HapII CCGG 6 cut(s) 359, 965, 1084, 1094, 1241, 1331
HgaI GACGC 1 cut(s) 547
HhaI GCGC 1 cut(s) 714
Hin1II CATG 4 cut(s) 36, 1191, 1432, 1438
Hin6I GCGC 1 cut(s) 712
HinP1I GCGC 1 cut(s) 712
HindIII AAGCTT 2 cut(s) 321, 1400
HinfI GANTC 4 cut(s) 740, 821, 1031, 1047
HpaII CCGG 6 cut(s) 359, 965, 1084, 1094, 1241, 1331
HphI GGTGA 2 cut(s) 440, 1447
Hpy166II GTNNAC 2 cut(s) 1169, 1376
Hpy188I TCNGA 5 cut(s) 74, 272, 367, 605, 1036
Hpy188III TCNNGA 4 cut(s) 10, 183, 733, 871
Hpy8I GTNNAC 2 cut(s) 1169, 1376
Hpy99I CGWCG 2 cut(s) 189, 541
HpyAV CCTTC 1 cut(s) 1090
HpyCH4III ACNGT 6 cut(s) 232, 253, 304, 446, 562, 975
HpyCH4IV ACGT 3 cut(s) 556, 958, 1134
HpyF10VI GCNNNNNNNGC 4 cut(s) 320, 333, 342, 547
HpyF3I CTNAG 5 cut(s) 58, 71, 568, 680, 1478
HpySE526I ACGT 3 cut(s) 556, 958, 1134
Hsp92II CATG 4 cut(s) 36, 1191, 1432, 1438
HspAI GCGC 1 cut(s) 712
Ksp22I TGATCA 1 cut(s) 1264
Kzo9I GATC 4 cut(s) 74, 328, 751, 1264
LmnI GCTCC 2 cut(s) 142, 463
LweI GCATC 3 cut(s) 1099, 1326, 1344
MaeI CTAG 2 cut(s) 425, 995
MaeII ACGT 3 cut(s) 556, 958, 1134
MaeIII GTNAC 5 cut(s) 223, 446, 552, 799, 959
MalI GATC 4 cut(s) 76, 330, 753, 1266
MboI GATC 4 cut(s) 74, 328, 751, 1264
MboII GAAGA 7 cut(s) 86, 89, 234, 650, 854, 1212, 1418
MfeI CAATTG 1 cut(s) 404
MflI RGATCY 1 cut(s) 74
MhlI GDGCHC 5 cut(s) 147, 468, 911, 1171, 1299
MluCI AATT 6 cut(s) 404, 513, 776, 1140, 1288, 1503
MlyI GAGTC 1 cut(s) 1041
MmeI TCCRAC 1 cut(s) 798
Mph1103I ATGCAT 1 cut(s) 1189
MseI TTAA 2 cut(s) 531, 1383
MslI CAYNNNNRTG 2 cut(s) 934, 1433
MspI CCGG 6 cut(s) 359, 965, 1084, 1094, 1241, 1331
MspR9I CCNGG 5 cut(s) 105, 338, 352, 965, 1332
MunI CAATTG 1 cut(s) 404
Mva1269I GAATGC 1 cut(s) 702
MvaI CCWGG 3 cut(s) 105, 338, 352
MwoI GCNNNNNNNGC 4 cut(s) 320, 333, 342, 547
NciI CCSGG 2 cut(s) 965, 1332
NdeII GATC 4 cut(s) 74, 328, 751, 1264
NlaIII CATG 4 cut(s) 36, 1191, 1432, 1438
NlaIV GGNNCC 1 cut(s) 196
NmeAIII GCCGAG 1 cut(s) 126
NmuCI GTSAC 3 cut(s) 446, 552, 799
NsiI ATGCAT 1 cut(s) 1189
NspV TTCGAA 1 cut(s) 1501
PctI GAATGC 1 cut(s) 702
PfeI GAWTC 3 cut(s) 740, 821, 1031
PinAI ACCGGT 1 cut(s) 358
PleI GAGTC 1 cut(s) 1041
PpsI GAGTC 1 cut(s) 1041
Ppu21I YACGTR 2 cut(s) 557, 959
PpuMI RGGWCCY 1 cut(s) 265
Psp124BI GAGCTC 3 cut(s) 147, 468, 1299
Psp5II RGGWCCY 1 cut(s) 265
Psp6I CCWGG 3 cut(s) 103, 336, 350
PspGI CCWGG 3 cut(s) 103, 336, 350
PspN4I GGNNCC 1 cut(s) 196
PspPI GGNCC 3 cut(s) 107, 194, 265
PspPPI RGGWCCY 1 cut(s) 265
PsuI RGATCY 1 cut(s) 74
RsaI GTAC 3 cut(s) 559, 1151, 1488
RsaNI GTAC 3 cut(s) 558, 1150, 1487
RseI CAYNNNNRTG 2 cut(s) 934, 1433
SacI GAGCTC 3 cut(s) 147, 468, 1299
SaqAI TTAA 2 cut(s) 531, 1383
Sau3AI GATC 4 cut(s) 74, 328, 751, 1264
Sau96I GGNCC 3 cut(s) 107, 194, 265
SchI GAGTC 1 cut(s) 1041
ScrFI CCNGG 5 cut(s) 105, 338, 352, 965, 1332
SduI GDGCHC 5 cut(s) 147, 468, 911, 1171, 1299
SfaNI GCATC 3 cut(s) 1099, 1326, 1344
SfcI CTRYAG 1 cut(s) 1194
SfuI TTCGAA 1 cut(s) 1501
SinI GGWCC 2 cut(s) 107, 265
SmiMI CAYNNNNRTG 2 cut(s) 934, 1433
SmlI CTYRAG 2 cut(s) 10, 731
SmoI CTYRAG 2 cut(s) 10, 731
SnaBI TACGTA 1 cut(s) 959
Sse9I AATT 6 cut(s) 404, 513, 776, 1140, 1288, 1503
SsiI CCGC 5 cut(s) 334, 506, 662, 905, 1146
SspMI CTAG 2 cut(s) 425, 995
SstI GAGCTC 3 cut(s) 147, 468, 1299
StyD4I CCNGG 5 cut(s) 103, 336, 350, 963, 1330
StyI CCWWGG 1 cut(s) 697
TaaI ACNGT 6 cut(s) 232, 253, 304, 446, 562, 975
TaiI ACGT 3 cut(s) 559, 961, 1137
TaqI TCGA 8 cut(s) 573, 706, 754, 977, 1045, 1117, 1272, 1501
TasI AATT 6 cut(s) 404, 513, 776, 1140, 1288, 1503
TfiI GAWTC 3 cut(s) 740, 821, 1031
Tru1I TTAA 2 cut(s) 531, 1383
Tru9I TTAA 2 cut(s) 531, 1383
TscAI CASTG 3 cut(s) 598, 844, 936
TseFI GTSAC 3 cut(s) 446, 552, 799
Tsp45I GTSAC 3 cut(s) 446, 552, 799
TspDTI ATGAA 3 cut(s) 234, 498, 1445
TspGWI ACGGA 3 cut(s) 374, 926, 1366
TspRI CASTG 3 cut(s) 598, 844, 936
VneI GTGCAC 1 cut(s) 1167
VpaK11BI GGWCC 2 cut(s) 107, 265
XapI RAATTY 3 cut(s) 1140, 1288, 1503
XspI CTAG 2 cut(s) 425, 995
Zsp2I ATGCAT 1 cut(s) 1189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.