Prupe.1G468400_v2.0.a1

transcriptional co-repressor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000670
Physical Location & Seq
Reverse (-)
38989125 .. 38997104
7980 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G468400.16

Sequence Viewer

Length: 2757 bp
ATGTCTCAGACCAACTGGGAAGCTGATAAAATGTTAGATGTGTATATCCACGACTATTTAGTGAAGAGAGATTTAAAAGCTTCTGCTCAAGCTTTTCAAGCTGAAGGAAAAGTATCCTCAGATCCAGTTGCTATTGATGCACCGGGAGGTTTCCTATTTGAATGGTGGTCAGTTTTCTGGGATATATTCATTGCTAGGACTAATGAGAAGCATTCAGAGGTTGCTGCATCTTACATTGAGACACAGTTAATTAAAGCAAGGGAGCAGCAGCAGCAGCAGCAACAACAGCAACAACAACAACAACAGCAACAACAACAGCAACAATCCCAGCAACCCCAACACTCCCAACAACAGCAGCAACAGCAGCAGCAGCACATGCAAATGCAGCAGCTCCTGTTGCACAGGCATGCTCAGCAGCAGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAGCAGCAACAACAGCAGCAGCCACAGCAGCAACAGCAACAGCCACAGCCACAACAGAGAAGAGATGGGGTCCATTTCCTCAATGGAACTACAAATGGGCTTGTCGGAAATGATCCTCTCATGCGACAAAATCCTGGAACAGCAAATGCAATGGCCACAAAGATGTACGAGGAAAAATTAAAACTTCCACTTCAGAGAGATTCTTTGGATGATGCATCTATGAAGCAGAGATTTGGTGAGAATGTGGGCCAGATTTTGGATCAAAATCATGCTTCAATATTAAAGTCAGCTGCAGCAGCCGGCCAGCCTTCAGGGCAAGTATTGCATGGTACAGCTGGTGGGATGACTCAACAAGTGCAAGCTCGAAATCAGCAGTTGCCAGGGTCTACACCGGACATAAAGACTGAAATCAATCCAGTATTGAATCCCAGAGCTGCATGCCCCGAGGGATCATTAATAGGAATTCCTGGATCAAATCAGGGTGGTAACAATTTGACTTTAAAAGGATGGCCCCTCACAGGTTTGGAGCAGCTTCGCAGTGGGCTTCTTCAGCAACAAAAACCTTTTATACAAGCTCCCCAGCCCTTTCACCAGCTTCAGATGTTGACACCACAACACCAGCAGCAACTTATGCTTGCTCAGCAAAATTTGACATCACCTTCTGCAAGTGATGAAAGTAGAAGACTAAGAATGCTAATGAATAATCGCAGTATGGGTCTTGGGAAGGATGGCCTTCCAAATTCTGTTGGTGATGTGGGATCACCTCTTCAAGCTGCTGGGCCTATTATGCCTCGTGGAGATACAGATATGCTGATTAAGTTAAAAATGGCTCATTTACACCAGCAACAAAACAGTAATCCACAACAGCAGCAGCAACAGCTTCAGCAGCATAATCTTTCTGCTCAGCAGTCGCAAAGTTCAAATCTCAATCCCCACCAGCAAGATAAAATAGGCGGTGCTGGTAGTATCACTATGGATGGTAGCATCTCGAACTCCTTTCGAGGAAATGATCAGGTTTCAAAAAACCAGGCTGGGAGAAAGAGAAAGCAGCCAGTGTCATCTTCAGGTCCTGCCAATAGCACGGGAACAGCAAACACAGCTGGGCCTTCCCCGAGTTCAGCCCCTTCAACTCCCTCAACGCACACTCCTGGAGATGTAATCTCAATGCCTGCCTTGCCCCATAGTGGTAGCTCCTCCAAGCCTCTGATGATGTTTGGCCCTGATGGTACTGGGACTCTTACGTCACCATCAAATCAGTTGTGGGATGATAAAGATCTTGAATTGCAGGCTGATATGGATCGATTTGTAGAGGATGGTTCTCTTGATGATAATGTCGAGTCTTTTTTATCCCATGATGATGTGGACCCTAGAGATGCTGTTGGTCGATGTATGGATGTCAGCAAAGGGTTCACATTTACGGAAGTACACTCTGTTAAAGCAAGCACAACCAAGGTTAATAGCTGTCACTTCTCGTCGGATGGAAAGTTTCTTGCTAGTGGTGGCCATGATAAAAAGGCTGTATTGTGGTACACAGATACATTAAAGGTAAAATCAACTCTTGAAGAACATTCAGCTTTGATCACTGATGTTCGTTTTAGTCCAAGCATGCCACGTCTTGCAACGTCTTCATTCGACAAAACTGTCAGGGTCTGGGATGCTGACAATCCTGGCTATTCACTCCGTACCTTTATGGGACATTCTGCCTCTGTTATGTCATTAGATTTCCACCCAAATAAAGATGACCTTATCTGCTCCTGCGACTCGGATGGTCAGATACGCTACTGGAGTATTAACAATGGCAGCTGCTCAAGTGTGTTCAAGGGTGGTACAGCACAGATGAGATTTCAACCCCGCCATGGAAGATTTCTTGCTGCAGCGGCAGATAATGTTGTATCTATACTGGATGTCGAGACACAGGCTTGTCGGCATTCATTACAGGGGCATAGTAAGCCTGTCCATTCTGTGTGCTGGGATCCATCTGGCGAGTTCCTTGCATCTGTCAGTGAGGACTCTGTAAGAGTTTGGACACTCAGATCAGGAGGTGAAGGGGAATGTGTTCATGAGTTGAGCTGCAATGGAAGTAAATTTCATTCATGTGTTTTCCATCCGACGTATACTTCCCTGCTGGTCATTGGCTGTTATCAGTCATTGGAGTTGTGGAACATGACAGAGAACAAGACAATGACTCTATCAGCACATGATGGACTTATTGCTGCTTTGGCTATGTCAACTGTTACGGGTTTGGTTGCTTCGGCTAGTCATGATAAGTTTGTCAAGCTCTGGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0001558 GO:0001666 GO:0003002 GO:0003006 GO:0005975 GO:0005976 GO:0006355 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009798 GO:0009845 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009943 GO:0009944 GO:0009955 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010073 GO:0010154 GO:0010191 GO:0010214 GO:0010243 GO:0010272 GO:0010393 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0022414 GO:0022603 GO:0022604 GO:0030307 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032504 GO:0033554 GO:0036293 GO:0040008 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0044237 GO:0044238 GO:0045892 GO:0045927 GO:0045934 GO:0045995 GO:0046677 GO:0046898 GO:0048316 GO:0048359 GO:0048507 GO:0048509 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048608 GO:0048609 GO:0048638 GO:0048639 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051510 GO:0051512 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060992 GO:0061458 GO:0065001 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0071704 GO:0080001 GO:0080090 GO:0090351 GO:0097305 GO:1901654 GO:1901698 GO:1901700 GO:1902074 GO:1902183 GO:1902679 GO:1903506 GO:1903507 GO:2000024 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LisH WD40

Protein Analysis

919

Amino Acids

101.25

Weight (kDa)

6.42

Isoelectric Point (pI)

55.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000670)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G32551 AT4G32551
fragaria_vesca FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940
malus_domestica MD02G1040200.v1.1 MD08G1139100.v1.1 MD15G1117100.v1.1 MD15G1145100.v1.1
prunus_persica Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.7G235500_v2.0.a1 Prupe.7G235500_v2.0.a1 Prupe.7G235500_v2.0.a1 Prupe.7G235500_v2.0.a1
pyrus_communis pycom02g03350 pycom08g11750 pycom15g10550 pycom15g16250
rosa_chinensis RchiOBHm_Chr2g0089671 RchiOBHm_Chr3g0465211 RchiOBHm_Chr6g0312941
rosa_laevigata RLG00000010283 RLG00000016050
rosa_multiflora Rmu_sc0000665.1_g000023 Rmu_sc0008049.1_g000043 Rmu_sc0008049.1_g000044
rosa_roxburghii Rroxscaffold_2G00151660 Rroxscaffold_7G00156310
rosa_rugosa Rorug02G0002500 Rorug02G0002500 Rorug06G0400700 Rorug06G0400700 Rorug06G0400700 Rorug06G0400700 Rorug06G0400800.1 Rorug06G0400900.1
rosa_samantha Rh2AG047900 Rh2BG046500 Rh2CG048500 Rh2DG047900 Rh6AG517700 Rh6BG529400 Rh6CG533900 Rh6DG520500
rosa_wichuraiana Rw2G004260 Rw5G017770 Rw6G045010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1708, 2108
AccB7I CCANNNNNTGG 1 cut(s) 724
AccI GTMKAC 2 cut(s) 854, 2582
AciI CCGC 3 cut(s) 1422, 2320, 2345
AclWI GGATC 9 cut(s) 116, 575, 735, 925, 946, 1234, 1773, 2435, 2448
AcoI YGGCCR 3 cut(s) 621, 769, 1969
AcsI RAATTY 4 cut(s) 930, 1114, 1207, 2552
AcuI CTGAAG 7 cut(s) 123, 644, 762, 1001, 1049, 1334, 1515
AfaI GTAC 7 cut(s) 635, 799, 1696, 1893, 1997, 2152, 2296
AfiI CCNNNNNNNGG 4 cut(s) 724, 986, 1652, 2324
AjiI CACGTC 1 cut(s) 2081
AjnI CCWGG 6 cut(s) 601, 847, 934, 1494, 1615, 2134
Alw26I GTCTC 3 cut(s) 9, 233, 2372
AlwI GGATC 9 cut(s) 116, 575, 735, 925, 946, 1234, 1773, 2435, 2448
AlwNI CAGNNNCTG 3 cut(s) 394, 1538, 2118
Ama87I CYCGRG 2 cut(s) 911, 1579
AoxI GGCC 9 cut(s) 621, 715, 769, 977, 1198, 1247, 1571, 1684, 1969
ApoI RAATTY 4 cut(s) 930, 1114, 1207, 2552
AseI ATTAAT 1 cut(s) 923
Asp700I GAANNNNTTC 1 cut(s) 2523
AspS9I GGNCC 8 cut(s) 538, 715, 978, 1247, 1535, 1571, 1685, 1831
AsuC2I CCSGG 1 cut(s) 144
AsuHPI GGTGA 7 cut(s) 716, 1049, 1116, 1221, 1229, 1704, 2522
AvaI CYCGRG 2 cut(s) 911, 1579
AvaII GGWCC 3 cut(s) 538, 1535, 1831
BalI TGGCCA 2 cut(s) 623, 1971
BamHI GGATCC 1 cut(s) 2440
BauI CACGAG 1 cut(s) 1260
BbsI GAAGAC 2 cut(s) 1156, 2085
BcgI CGANNNNNNTGC 2 cut(s) 2441, 2475
BciT130I CCWGG 6 cut(s) 603, 849, 936, 1496, 1617, 2136
BciVI GTATCC 1 cut(s) 124
BclI TGATCA 2 cut(s) 1477, 2046
BcnI CCSGG 1 cut(s) 144
BcoDI GTCTC 3 cut(s) 9, 233, 2372
BfaI CTAG 4 cut(s) 195, 1836, 1962, 2724
BfmI CTRYAG 2 cut(s) 759, 2340
BfuI GTATCC 1 cut(s) 124
BglI GCCNNNNNGGC 1 cut(s) 781
BglII AGATCT 1 cut(s) 1741
BlpI GCTNAGC 3 cut(s) 411, 1107, 1371
Bme1390I CCNGG 7 cut(s) 144, 603, 849, 936, 1496, 1617, 2136
Bme18I GGWCC 3 cut(s) 538, 1535, 1831
BmeT110I CYCGRG 2 cut(s) 911, 1579
BmgBI CACGTC 1 cut(s) 2081
BmgT120I GGNCC 8 cut(s) 538, 715, 978, 1247, 1535, 1571, 1685, 1831
BmiI GGNNCC 4 cut(s) 539, 980, 1833, 2442
BmrFI CCNGG 7 cut(s) 144, 603, 849, 936, 1496, 1617, 2136
BmrI ACTGGG 2 cut(s) 25, 1707
BmsI GCATC 8 cut(s) 127, 236, 670, 692, 1461, 1831, 2113, 2471
BmuI ACTGGG 2 cut(s) 25, 1707
BpiI GAAGAC 2 cut(s) 1156, 2085
BpmI CTGGAG 2 cut(s) 1638, 2272
Bpu1102I GCTNAGC 3 cut(s) 411, 1107, 1371
BpuEI CTTGAG 2 cut(s) 72, 2260
BpuMI CCSGG 1 cut(s) 144
Bsa29I ATCGAT 1 cut(s) 1768
BsaBI GATNNNNATC 3 cut(s) 732, 1740, 1764
BsaJI CCNNGG 4 cut(s) 848, 912, 1917, 2323
BsaWI WCCGGW 1 cut(s) 859
BsaXI ACNNNNNCTCC 2 cut(s) 1597, 1627
Bsc4I CCNNNNNNNGG 4 cut(s) 724, 986, 1652, 2324
Bse118I RCCGGY 1 cut(s) 767
Bse1I ACTGG 7 cut(s) 20, 125, 884, 1520, 1702, 2255, 2373
Bse3DI GCAATG 3 cut(s) 189, 624, 2548
Bse8I GATNNNNATC 3 cut(s) 732, 1740, 1764
BseBI CCWGG 6 cut(s) 603, 849, 936, 1496, 1617, 2136
BseCI ATCGAT 1 cut(s) 1768
BseDI CCNNGG 4 cut(s) 848, 912, 1917, 2323
BseJI GATNNNNATC 3 cut(s) 732, 1740, 1764
BseLI CCNNNNNNNGG 4 cut(s) 724, 986, 1652, 2324
BseMI GCAATG 3 cut(s) 189, 624, 2548
BseMII CTCAG 6 cut(s) 20, 132, 425, 1121, 1385, 2512
BseNI ACTGG 7 cut(s) 20, 125, 884, 1520, 1702, 2255, 2373
BseRI GAGGAG 1 cut(s) 1651
BseYI CCCAGC 6 cut(s) 327, 1047, 1244, 1499, 1568, 2436
BshFI GGCC 9 cut(s) 623, 717, 771, 979, 1200, 1249, 1573, 1686, 1971
BshVI ATCGAT 1 cut(s) 1768
BsiHKCI CYCGRG 2 cut(s) 911, 1579
BsiSI CCGG 3 cut(s) 143, 768, 860
BslFI GGGAC 2 cut(s) 1714, 2175
BslI CCNNNNNNNGG 4 cut(s) 724, 986, 1652, 2324
BsmAI GTCTC 3 cut(s) 9, 233, 2372
BsmFI GGGAC 2 cut(s) 1714, 2175
BsmI GAATGC 3 cut(s) 211, 1164, 2395
BsnI GGCC 9 cut(s) 623, 717, 771, 979, 1200, 1249, 1573, 1686, 1971
BsoBI CYCGRG 2 cut(s) 911, 1579
Bsp1720I GCTNAGC 3 cut(s) 411, 1107, 1371
Bsp19I CCATGG 1 cut(s) 2323
BspACI CCGC 3 cut(s) 1422, 2320, 2345
BspANI GGCC 9 cut(s) 623, 717, 771, 979, 1200, 1249, 1573, 1686, 1971
BspCNI CTCAG 6 cut(s) 19, 131, 424, 1120, 1384, 2511
BspDI ATCGAT 1 cut(s) 1768
BspHI TCATGA 2 cut(s) 2527, 2728
BspLI GGNNCC 4 cut(s) 539, 980, 1833, 2442
BspMAI CTGCAG 2 cut(s) 763, 2344
BspPI GGATC 9 cut(s) 116, 575, 735, 925, 946, 1234, 1773, 2435, 2448
BsrDI GCAATG 3 cut(s) 189, 624, 2548
BsrFI RCCGGY 1 cut(s) 767
BsrI ACTGG 7 cut(s) 20, 125, 884, 1520, 1702, 2255, 2373
BssAI RCCGGY 1 cut(s) 767
BssECI CCNNGG 4 cut(s) 848, 912, 1917, 2323
BssNAI GTATAC 1 cut(s) 2583
BssSI CACGAG 1 cut(s) 1260
BssT1I CCWWGG 2 cut(s) 1917, 2323
Bst1107I GTATAC 1 cut(s) 2583
Bst2BI CACGAG 1 cut(s) 1260
Bst2UI CCWGG 6 cut(s) 603, 849, 936, 1496, 1617, 2136
Bst4CI ACNGT 4 cut(s) 246, 1322, 2110, 2701
Bst6I CTCTTC 3 cut(s) 59, 523, 1239
BstAPI GCANNNNNTGC 3 cut(s) 376, 790, 1099
BstDEI CTNAG 7 cut(s) 6, 118, 411, 1107, 1154, 1371, 2498
BstDSI CCRYGG 1 cut(s) 2323
BstMAI GTCTC 3 cut(s) 9, 233, 2372
BstNI CCWGG 6 cut(s) 603, 849, 936, 1496, 1617, 2136
BstNSI RCATGY 4 cut(s) 379, 410, 909, 2077
BstSCI CCNGG 7 cut(s) 142, 601, 847, 934, 1494, 1615, 2134
BstSFI CTRYAG 2 cut(s) 759, 2340
BstV2I GAAGAC 2 cut(s) 1156, 2085
BstX2I RGATCY 3 cut(s) 121, 1741, 2440
BstYI RGATCY 3 cut(s) 121, 1741, 2440
BstZ17I GTATAC 1 cut(s) 2583
Bsu15I ATCGAT 1 cut(s) 1768
BsuI GTATCC 1 cut(s) 124
BsuRI GGCC 9 cut(s) 623, 717, 771, 979, 1200, 1249, 1573, 1686, 1971
BsuTUI ATCGAT 1 cut(s) 1768
BtgI CCRYGG 1 cut(s) 2323
BtrI CACGTC 1 cut(s) 2081
BtsI GCAGTG 1 cut(s) 1012
BtsIMutI CAGTG 4 cut(s) 1012, 1527, 2049, 2476
CaiI CAGNNNCTG 3 cut(s) 394, 1538, 2118
CciI TCATGA 2 cut(s) 2527, 2728
Cfr10I RCCGGY 1 cut(s) 767
Cfr13I GGNCC 8 cut(s) 538, 715, 978, 1247, 1535, 1571, 1685, 1831
ClaI ATCGAT 1 cut(s) 1768
Csp6I GTAC 7 cut(s) 634, 798, 1695, 1892, 1996, 2151, 2295
CviQI GTAC 7 cut(s) 634, 798, 1695, 1892, 1996, 2151, 2295
DdeI CTNAG 7 cut(s) 6, 118, 411, 1107, 1154, 1371, 2498
DraI TTTAAA 2 cut(s) 75, 969
DrdI GACNNNNNNGTC 2 cut(s) 1708, 2108
DseDI GACNNNNNNGTC 2 cut(s) 1708, 2108
EaeI YGGCCR 3 cut(s) 621, 769, 1969
Eam1104I CTCTTC 3 cut(s) 59, 523, 1239
EarI CTCTTC 3 cut(s) 59, 523, 1239
Eco130I CCWWGG 2 cut(s) 1917, 2323
Eco47I GGWCC 3 cut(s) 538, 1535, 1831
Eco57I CTGAAG 7 cut(s) 123, 644, 762, 1001, 1049, 1334, 1515
Eco88I CYCGRG 2 cut(s) 911, 1579
EcoO109I RGGNCCY 1 cut(s) 1535
EcoRI GAATTC 1 cut(s) 930
EcoRII CCWGG 6 cut(s) 601, 847, 934, 1494, 1615, 2134
EcoT14I CCWWGG 2 cut(s) 1917, 2323
EcoT22I ATGCAT 1 cut(s) 685
ErhI CCWWGG 2 cut(s) 1917, 2323
FalI AAGNNNNNCTT 2 cut(s) 2196, 2228
FaqI GGGAC 2 cut(s) 1714, 2175
FauI CCCGC 1 cut(s) 2327
FbaI TGATCA 2 cut(s) 1477, 2046
FblI GTMKAC 2 cut(s) 854, 2582
FspBI CTAG 4 cut(s) 195, 1836, 1962, 2724
GsaI CCCAGC 6 cut(s) 331, 1051, 1248, 1503, 1572, 2440
GsuI CTGGAG 2 cut(s) 1638, 2272
HaeIII GGCC 9 cut(s) 623, 717, 771, 979, 1200, 1249, 1573, 1686, 1971
HapII CCGG 3 cut(s) 143, 768, 860
HincII GTYRAC 2 cut(s) 1074, 2697
HindII GTYRAC 2 cut(s) 1074, 2697
HindIII AAGCTT 2 cut(s) 78, 90
HinfI GANTC 8 cut(s) 668, 814, 892, 1702, 1805, 2228, 2477, 2653
HpaII CCGG 3 cut(s) 143, 768, 860
HphI GGTGA 7 cut(s) 716, 1049, 1116, 1221, 1229, 1704, 2522
Hpy166II GTNNAC 8 cut(s) 855, 1074, 1831, 1878, 1894, 1998, 2583, 2697
Hpy188III TCNNGA 9 cut(s) 1456, 1745, 1790, 2027, 2377, 2505, 2528, 2729, 2749
Hpy8I GTNNAC 8 cut(s) 855, 1074, 1831, 1878, 1894, 1998, 2583, 2697
Hpy99I CGWCG 2 cut(s) 1945, 2581
HpyAV CCTTC 8 cut(s) 98, 786, 1137, 1186, 1211, 1584, 1602, 2507
HpyCH4III ACNGT 4 cut(s) 246, 1322, 2110, 2701
HpyCH4IV ACGT 4 cut(s) 1709, 2080, 2090, 2579
HpyF3I CTNAG 7 cut(s) 6, 118, 411, 1107, 1154, 1371, 2498
HpySE526I ACGT 4 cut(s) 1709, 2080, 2090, 2579
KroI GCCGGC 1 cut(s) 767
KroNI GCCGGC 1 cut(s) 769
Ksp22I TGATCA 2 cut(s) 1477, 2046
LmnI GCTCC 6 cut(s) 262, 396, 994, 1048, 1664, 2225
LweI GCATC 8 cut(s) 127, 236, 670, 692, 1461, 1831, 2113, 2471
MaeI CTAG 4 cut(s) 195, 1836, 1962, 2724
MaeII ACGT 4 cut(s) 1709, 2080, 2090, 2579
MaeIII GTNAC 4 cut(s) 953, 1710, 1931, 2701
MboII GAAGA 9 cut(s) 76, 540, 1007, 1161, 1226, 1521, 2042, 2085, 2340
MflI RGATCY 3 cut(s) 121, 1741, 2440
MlsI TGGCCA 2 cut(s) 623, 1971
MluCI AATT 8 cut(s) 249, 644, 930, 958, 1114, 1207, 1748, 2552
MluNI TGGCCA 2 cut(s) 623, 1971
MlyI GAGTC 6 cut(s) 808, 1696, 1814, 2222, 2471, 2647
MmeI TCCRAC 3 cut(s) 553, 1923, 2600
Mox20I TGGCCA 2 cut(s) 623, 1971
Mph1103I ATGCAT 1 cut(s) 685
MroNI GCCGGC 1 cut(s) 767
MroXI GAANNNNTTC 1 cut(s) 2523
MscI TGGCCA 2 cut(s) 623, 1971
MslI CAYNNNNRTG 5 cut(s) 380, 405, 629, 1824, 2562
Msp20I TGGCCA 2 cut(s) 623, 1971
MspA1I CMGCKG 5 cut(s) 758, 803, 1568, 2271, 2345
MspI CCGG 3 cut(s) 143, 768, 860
MspR9I CCNGG 7 cut(s) 144, 603, 849, 936, 1496, 1617, 2136
Mva1269I GAATGC 3 cut(s) 211, 1164, 2395
MvaI CCWGG 6 cut(s) 603, 849, 936, 1496, 1617, 2136
NaeI GCCGGC 1 cut(s) 769
NciI CCSGG 1 cut(s) 144
NcoI CCATGG 1 cut(s) 2323
NgoMIV GCCGGC 1 cut(s) 767
NlaIV GGNNCC 4 cut(s) 539, 980, 1833, 2442
NmuCI GTSAC 2 cut(s) 1710, 1931
NsiI ATGCAT 1 cut(s) 685
NspI RCATGY 4 cut(s) 379, 410, 909, 2077
PacI TTAATTAA 1 cut(s) 252
PaeI GCATGC 3 cut(s) 410, 909, 2077
PagI TCATGA 2 cut(s) 2527, 2728
PctI GAATGC 3 cut(s) 211, 1164, 2395
PdiI GCCGGC 1 cut(s) 769
PdmI GAANNNNTTC 1 cut(s) 2523
PfeI GAWTC 2 cut(s) 668, 892
PflMI CCANNNNNTGG 1 cut(s) 724
PfoI TCCNGGA 3 cut(s) 601, 934, 1615
PleI GAGTC 6 cut(s) 808, 1696, 1813, 2222, 2471, 2647
PpsI GAGTC 6 cut(s) 808, 1696, 1813, 2222, 2471, 2647
PpuMI RGGWCCY 1 cut(s) 1535
PshBI ATTAAT 1 cut(s) 923
Psp5II RGGWCCY 1 cut(s) 1535
Psp6I CCWGG 6 cut(s) 601, 847, 934, 1494, 1615, 2134
PspFI CCCAGC 6 cut(s) 327, 1047, 1244, 1499, 1568, 2436
PspGI CCWGG 6 cut(s) 601, 847, 934, 1494, 1615, 2134
PspN4I GGNNCC 4 cut(s) 539, 980, 1833, 2442
PspPI GGNCC 8 cut(s) 538, 715, 978, 1247, 1535, 1571, 1685, 1831
PspPPI RGGWCCY 1 cut(s) 1535
PstI CTGCAG 2 cut(s) 763, 2344
PstNI CAGNNNCTG 3 cut(s) 394, 1538, 2118
PsuI RGATCY 3 cut(s) 121, 1741, 2440
PvuII CAGCTG 4 cut(s) 758, 803, 1568, 2271
RsaI GTAC 7 cut(s) 635, 799, 1696, 1893, 1997, 2152, 2296
RsaNI GTAC 7 cut(s) 634, 798, 1695, 1892, 1996, 2151, 2295
RseI CAYNNNNRTG 5 cut(s) 380, 405, 629, 1824, 2562
Sau96I GGNCC 8 cut(s) 538, 715, 978, 1247, 1535, 1571, 1685, 1831
SchI GAGTC 6 cut(s) 808, 1696, 1814, 2222, 2471, 2647
ScrFI CCNGG 7 cut(s) 144, 603, 849, 936, 1496, 1617, 2136
SfaNI GCATC 8 cut(s) 127, 236, 670, 692, 1461, 1831, 2113, 2471
SfcI CTRYAG 2 cut(s) 759, 2340
SinI GGWCC 3 cut(s) 538, 1535, 1831
SmiMI CAYNNNNRTG 5 cut(s) 380, 405, 629, 1824, 2562
SmlI CTYRAG 2 cut(s) 87, 2275
SmoI CTYRAG 2 cut(s) 87, 2275
SphI GCATGC 3 cut(s) 410, 909, 2077
Sse9I AATT 8 cut(s) 249, 644, 930, 958, 1114, 1207, 1748, 2552
SsiI CCGC 3 cut(s) 1422, 2320, 2345
SspI AATATT 1 cut(s) 747
SspMI CTAG 4 cut(s) 195, 1836, 1962, 2724
StyD4I CCNGG 7 cut(s) 142, 601, 847, 934, 1494, 1615, 2134
StyI CCWWGG 2 cut(s) 1917, 2323
TaaI ACNGT 4 cut(s) 246, 1322, 2110, 2701
TaiI ACGT 4 cut(s) 1712, 2083, 2093, 2582
TaqI TCGA 8 cut(s) 832, 1457, 1468, 1768, 1803, 1852, 2100, 2376
TasI AATT 8 cut(s) 249, 644, 930, 958, 1114, 1207, 1748, 2552
TatI WGTACW 1 cut(s) 1891
TauI GCSGC 1 cut(s) 2348
TfiI GAWTC 2 cut(s) 668, 892
TscAI CASTG 4 cut(s) 1012, 1527, 2056, 2476
TseFI GTSAC 2 cut(s) 1710, 1931
Tsp45I GTSAC 2 cut(s) 1710, 1931
TspDTI ATGAA 9 cut(s) 178, 704, 1155, 1181, 2085, 2388, 2516, 2546, 2550
TspGWI ACGGA 2 cut(s) 1901, 2138
TspRI CASTG 4 cut(s) 1012, 1527, 2056, 2476
Van91I CCANNNNNTGG 1 cut(s) 724
VpaK11BI GGWCC 3 cut(s) 538, 1535, 1831
VspI ATTAAT 1 cut(s) 923
XapI RAATTY 4 cut(s) 930, 1114, 1207, 2552
XceI RCATGY 4 cut(s) 379, 410, 909, 2077
XcmI CCANNNNNNNNNTGG 1 cut(s) 548
XmiI GTMKAC 2 cut(s) 854, 2582
XmnI GAANNNNTTC 1 cut(s) 2523
XspI CTAG 4 cut(s) 195, 1836, 1962, 2724
Zsp2I ATGCAT 1 cut(s) 685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.