pycom08g11750

transcriptional co-repressor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
OG0000670
Physical Location & Seq
Reverse (-)
9965063 .. 9972759
7697 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g11750.3

Sequence Viewer

Length: 2727 bp
ATGTCTCAGACCAACTGGGAAGCTGACAAAATGCTGGATGTGTATATCCATGATTATTTAGTGAAGAGGGATTTAAAAGCTTCTGCACAAGCTTTCCAAGCTGAAGGAAAAGTATCCTCAGATCCGGTTGCTATTGATGCACCAGGAGGTTTCCTATTTGAATGGTGGTCGGTTTTCTGGGATATATTCATTGCTAGGACTAATGAGAAGCATTCAGAGGTTGCTGCATCGTACATTGAGTTGATTAAAGCAAGGGAGCAGCAACAGCAGCAGCAGCAACAACAACAACAACAGCAACATTCCCAGCAACCGCAAAACTCACAACAACAGCAGCAGCAGCTGCAAATGCAGCAACTCATGTTTCAAAGGCAACAACAGCAGCAGCAGCAGCAACAACAACAACAACAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAACCACAGCAGCAACAGCAACAGCAACCGCCACAGCCGCATCAGAGAAGAGATGGGGCACATCTTCACAATGGACCTACAAATGGGCTTGTTGGAAATGATCCTCTCATGCGACAAAATCCTGGAACAGCGAATGCCATGGCTACAAAGATGTATGAGGAAAGATTAAAACTTCCTCTGCAGAGAGATTCTATGGATGATGCATCTATGAAGCAGAGATTTGGTGAGAATGTGGGCCAGATTTTGATCGATCAAAATCATACTTCAATATTGAAGTCAGCCGCAGCAACCGGCCAGCCTTCAGGGCAAGTTTTGCATGGTACAGCGGGTGGGATGACTCAACAAGTCCAAGCTCGAAATCAGCAATTGCCAGGGTCTACACCGGACATAAAGACTGAAATCAATCCAGTATTGAATCCCAGAGCTGCATGTCCTGAGGGATCATTGATAGGAATTCCTGGATCAAATCAGGGTGGAAACAATTTGACTTTAAAAGGATGGCCGCTCACTGGTTTGGAGCAGCTTCGCTCTGGACTTCTTCAGCAACAGAAACCTTTCATACAAGCTCCCCAGCCCTTTCATCAGCTTCAGATGTTGACACCACAACACCAGCAACTTATGCTTGCTCAGCAAAATATGACATCACCGTCTGCTGCCAGTGATGAAAGTAGACGACTGAGAATGCTAATGAATCGCAGTCTTGGGAAGGATGGCCTATCAAATTCTGTTGGTGACGTGGTACCAAATATGGGATCACCTCTTCAAGCTGGTGGCCCTATTTTGCCTCGTGGAGACACAGATATGCTGATTAAGTTAAAAATGGCTCAACTACAGCAGCAACAAAACAGCAATCCCCAACAGCAGCAGCAACAGCTTCAACAGCTTCAACAGCATGGTCTTTCTAATCAGCAGTCGCAAAATTCAAATCTCAATCCCCATCAGCAAGATAAAATGGGGGGTGCTGGCAGCATCACTATGGATGGTAGCATGTCAAACTCTTTTCGAGGAAATGATCAGGTTTCAAAAAACCAGGCAGGAAGAAAGAGAAAGCAGCCAGTGTCATCTTCAGGGCCTGCCAATAGCACGGGTACAGCAAACACAGCTGGGCCTTCCCCGAGTTCAGCCCCTTCAACTCCCTCGACTCACACTCCTGGAGATGTAATCTCAATGCCTGCCTTGCCCCATAGTGGTAGCTCCTCCAAGCCTCTGATGATGTTTGGCGCTGATGGTACTGGTACTCTTACTTCACCAGCACATCAGTTGTGGGATGATAAAGATCTTGAATTGCAGGCTGATATGGACCGATTTGTAGAGGATGGGTCTCTTGATGATAATGTCGAGTCTTTTTTATCCCCTGATGATGTGGATCATAGAGATGCTGTTGGTCGATGTATGGATGTCAGCAAAGGGTTCGCATTTACAGAAGTAAACTCTATTAAAGCAAGCGCAAGCAAGGTTACAAGCTGCCACTTCTCATCAGATGGAAAGTTTCTTGCTAGTGGGGGCCATGATAAGAAGGCTGTTTTATGGTACACAGATACACTAAAGCCAAAAAGTACGCTAGAAGAACATTCAGCTTTGATAACTGATGTTCGTTTTAGTCCGAGCATGCCACGTCTTGCAACGTCTTCATTCGACAAGACTGTCAGGGTCTGGGATGCGGACAATCCTGATTATTCTCTCCGTACCTTTATGGGACATTCGGCCTCTGTTATGTCATTAGATTTCCACCCAAATAAAGATGACCTCATCTGTTCTTGTGACAGTGATGGTCAGATACGCTACTGGAGTATTAACAATGGCAGCTGCTCGAGCGTGTTCAAGGGTGGTACAGCACAAATGAGATTTCAACCCCGTGTTGGAAGATTGCTTGCTGCAGCCGCTGAGAATGTTGTGTCTATACTGGATGTCGAGACTCAGACTTGTCGACATTCATTACAGGGGCATACTAAGCCTATCCATTCTGTGTGTTGGGATCCTTCTGGCGAGTTCCTTGCATCTGTCAGCGAGGACTCTGTAAGAGTTTGGACACTTGGAGCTGGAGGCGAAGGGGAATGCGTTCATGAGTTGAGCTGCAACGGAAATAAATTTCATTCATGCGTTTTCCATCCTACATATACTTCACTGCTGGTCATTGGCTGTTATCAGTCACTGGAGTTATGGAACATGACGGAGAACAAGACGATGACTCTATCAGCACACGAAGGACTTATTGCTGCGTTGTCTGTGTCAACTGGTACTGGTTTGGTTGCTTCGGCTAGTCACGACAAGTATGTCAAGCTCTGGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0001558 GO:0001666 GO:0003002 GO:0003006 GO:0005975 GO:0005976 GO:0006355 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009798 GO:0009845 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009943 GO:0009944 GO:0009955 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010073 GO:0010154 GO:0010191 GO:0010214 GO:0010243 GO:0010272 GO:0010393 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0022414 GO:0022603 GO:0022604 GO:0030307 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032504 GO:0033554 GO:0036293 GO:0040008 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0044237 GO:0044238 GO:0045892 GO:0045927 GO:0045934 GO:0045995 GO:0046677 GO:0046898 GO:0048316 GO:0048359 GO:0048507 GO:0048509 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048608 GO:0048609 GO:0048638 GO:0048639 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051510 GO:0051512 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060992 GO:0061458 GO:0065001 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0071704 GO:0080001 GO:0080090 GO:0090351 GO:0097305 GO:1901654 GO:1901698 GO:1901700 GO:1902074 GO:1902183 GO:1902679 GO:1903506 GO:1903507 GO:2000024 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LisH WD40

Protein Analysis

909

Amino Acids

99.84

Weight (kDa)

6.24

Isoelectric Point (pI)

52.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000670)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G32551 AT4G32551
fragaria_vesca FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940
malus_domestica MD02G1040200.v1.1 MD08G1139100.v1.1 MD15G1117100.v1.1 MD15G1145100.v1.1
prunus_persica Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.7G235500_v2.0.a1 Prupe.7G235500_v2.0.a1 Prupe.7G235500_v2.0.a1 Prupe.7G235500_v2.0.a1
pyrus_communis pycom02g03350 pycom08g11750 pycom15g10550 pycom15g16250
rosa_chinensis RchiOBHm_Chr2g0089671 RchiOBHm_Chr3g0465211 RchiOBHm_Chr6g0312941
rosa_laevigata RLG00000010283 RLG00000016050
rosa_multiflora Rmu_sc0000665.1_g000023 Rmu_sc0008049.1_g000043 Rmu_sc0008049.1_g000044
rosa_roxburghii Rroxscaffold_2G00151660 Rroxscaffold_7G00156310
rosa_rugosa Rorug02G0002500 Rorug02G0002500 Rorug06G0400700 Rorug06G0400700 Rorug06G0400700 Rorug06G0400700 Rorug06G0400800.1 Rorug06G0400900.1
rosa_samantha Rh2AG047900 Rh2BG046500 Rh2CG048500 Rh2DG047900 Rh6AG517700 Rh6BG529400 Rh6CG533900 Rh6DG520500
rosa_wichuraiana Rw2G004260 Rw5G017770 Rw6G045010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 1081, 2078, 2708
Acc65I GGTACC 1 cut(s) 1174
AccB1I GGYRCC 1 cut(s) 1174
AccBSI CCGCTC 1 cut(s) 940
AccI GTMKAC 3 cut(s) 812, 1105, 2362
AciI CCGC 8 cut(s) 311, 464, 473, 717, 761, 938, 2096, 2316
AclWI GGATC 8 cut(s) 116, 530, 883, 904, 1195, 1809, 2405, 2418
AcoI YGGCCR 2 cut(s) 727, 935
AcsI RAATTY 4 cut(s) 888, 1156, 1354, 2522
AcuI CTGAAG 5 cut(s) 123, 720, 959, 1007, 1485
AfiI CCNNNNNNNGG 5 cut(s) 518, 944, 1184, 1622, 2294
AjiI CACGTC 2 cut(s) 1171, 2051
AjnI CCWGG 6 cut(s) 142, 556, 805, 892, 1464, 1585
Alw26I GTCTC 4 cut(s) 9, 1221, 1761, 2342
AlwI GGATC 8 cut(s) 116, 530, 883, 904, 1195, 1809, 2405, 2418
AlwNI CAGNNNCTG 5 cut(s) 340, 1508, 2088, 2318, 2587
Ama87I CYCGRG 2 cut(s) 1549, 2245
AoxI GGCC 9 cut(s) 670, 727, 935, 1147, 1207, 1505, 1541, 1939, 2139
ApoI RAATTY 4 cut(s) 888, 1156, 1354, 2522
Asp700I GAANNNNTTC 2 cut(s) 989, 2493
Asp718I GGTACC 1 cut(s) 1174
AspLEI GCGC 2 cut(s) 1658, 1883
AspS9I GGNCC 7 cut(s) 509, 670, 1208, 1505, 1541, 1735, 1939
AsuHPI GGTGA 5 cut(s) 671, 1071, 1178, 1182, 1674
AvaI CYCGRG 2 cut(s) 1549, 2245
AvaII GGWCC 2 cut(s) 509, 1735
AxyI CCTNAGG 1 cut(s) 870
BaeGI GKGCMC 1 cut(s) 496
BamHI GGATCC 1 cut(s) 2410
BanI GGYRCC 1 cut(s) 1174
BarI GAAGNNNNNNTAC 2 cut(s) 1663, 1695
BauI CACGAG 1 cut(s) 1221
BbsI GAAGAC 1 cut(s) 2055
BcgI CGANNNNNNTGC 4 cut(s) 1828, 1862, 2411, 2445
BciT130I CCWGG 6 cut(s) 144, 558, 807, 894, 1466, 1587
BciVI GTATCC 1 cut(s) 124
BclI TGATCA 1 cut(s) 1447
BcoDI GTCTC 4 cut(s) 9, 1221, 1761, 2342
BfaI CTAG 4 cut(s) 195, 1932, 1997, 2694
BfmI CTRYAG 3 cut(s) 614, 1265, 2310
BfoI RGCGCY 1 cut(s) 1659
BfuI GTATCC 1 cut(s) 124
BglI GCCNNNNNGGC 1 cut(s) 739
BglII AGATCT 1 cut(s) 1711
BlpI GCTNAGC 1 cut(s) 1062
Bme1390I CCNGG 6 cut(s) 144, 558, 807, 894, 1466, 1587
Bme18I GGWCC 2 cut(s) 509, 1735
BmeT110I CYCGRG 2 cut(s) 1549, 2245
BmgBI CACGTC 2 cut(s) 1171, 2051
BmgT120I GGNCC 7 cut(s) 509, 670, 1208, 1505, 1541, 1735, 1939
BmiI GGNNCC 3 cut(s) 1176, 1940, 2412
BmrFI CCNGG 6 cut(s) 144, 558, 807, 894, 1466, 1587
BmrI ACTGGG 1 cut(s) 25
BmsI GCATC 9 cut(s) 127, 236, 484, 625, 647, 1413, 1801, 2083, 2441
BmuI ACTGGG 1 cut(s) 25
BpiI GAAGAC 1 cut(s) 2055
BpmI CTGGAG 4 cut(s) 1608, 2242, 2496, 2609
Bpu1102I GCTNAGC 1 cut(s) 1062
Bsa29I ATCGAT 1 cut(s) 684
BsaBI GATNNNNATC 4 cut(s) 680, 690, 1710, 1800
BsaI GGTCTC 1 cut(s) 1761
BsaJI CCNNGG 2 cut(s) 573, 806
BsaWI WCCGGW 2 cut(s) 124, 817
BsaXI ACNNNNNCTCC 2 cut(s) 1567, 1597
Bsc4I CCNNNNNNNGG 5 cut(s) 518, 944, 1184, 1622, 2294
Bse118I RCCGGY 1 cut(s) 725
Bse21I CCTNAGG 1 cut(s) 870
Bse3DI GCAATG 1 cut(s) 189
Bse8I GATNNNNATC 4 cut(s) 680, 690, 1710, 1800
BseBI CCWGG 6 cut(s) 144, 558, 807, 894, 1466, 1587
BseCI ATCGAT 1 cut(s) 684
BseDI CCNNGG 2 cut(s) 573, 806
BseJI GATNNNNATC 4 cut(s) 680, 690, 1710, 1800
BseLI CCNNNNNNNGG 5 cut(s) 518, 944, 1184, 1622, 2294
BseMI GCAATG 1 cut(s) 189
BseMII CTCAG 7 cut(s) 20, 132, 861, 1076, 1103, 2310, 2366
BseRI GAGGAG 1 cut(s) 1621
BseSI GKGCMC 1 cut(s) 496
BseYI CCCAGC 3 cut(s) 303, 1005, 1538
BsgI GTGCAG 1 cut(s) 69
BshFI GGCC 9 cut(s) 672, 729, 937, 1149, 1209, 1507, 1543, 1941, 2141
BshNI GGYRCC 1 cut(s) 1174
BshVI ATCGAT 1 cut(s) 684
BsiHKCI CYCGRG 2 cut(s) 1549, 2245
BsiSI CCGG 3 cut(s) 125, 726, 818
BslFI GGGAC 1 cut(s) 2145
BslI CCNNNNNNNGG 5 cut(s) 518, 944, 1184, 1622, 2294
BsmAI GTCTC 4 cut(s) 9, 1221, 1761, 2342
BsmFI GGGAC 1 cut(s) 2145
BsmI GAATGC 4 cut(s) 211, 574, 1122, 2495
BsnI GGCC 9 cut(s) 672, 729, 937, 1149, 1209, 1507, 1543, 1941, 2141
Bso31I GGTCTC 1 cut(s) 1761
BsoBI CYCGRG 2 cut(s) 1549, 2245
Bsp1286I GDGCHC 1 cut(s) 496
Bsp1720I GCTNAGC 1 cut(s) 1062
Bsp19I CCATGG 1 cut(s) 573
BspACI CCGC 8 cut(s) 311, 464, 473, 717, 761, 938, 2096, 2316
BspANI GGCC 9 cut(s) 672, 729, 937, 1149, 1209, 1507, 1543, 1941, 2141
BspCNI CTCAG 7 cut(s) 19, 131, 862, 1075, 1104, 2311, 2365
BspDI ATCGAT 1 cut(s) 684
BspHI TCATGA 1 cut(s) 2497
BspLI GGNNCC 3 cut(s) 1176, 1940, 2412
BspMAI CTGCAG 2 cut(s) 618, 2314
BspPI GGATC 8 cut(s) 116, 530, 883, 904, 1195, 1809, 2405, 2418
BspT107I GGYRCC 1 cut(s) 1174
BspTNI GGTCTC 1 cut(s) 1761
BsrBI CCGCTC 1 cut(s) 940
BsrDI GCAATG 1 cut(s) 189
BsrFI RCCGGY 1 cut(s) 725
BssAI RCCGGY 1 cut(s) 725
BssECI CCNNGG 2 cut(s) 573, 806
BssSI CACGAG 1 cut(s) 1221
BssT1I CCWWGG 1 cut(s) 573
Bst2BI CACGAG 1 cut(s) 1221
Bst2UI CCWGG 6 cut(s) 144, 558, 807, 894, 1466, 1587
Bst4CI ACNGT 3 cut(s) 1083, 2080, 2201
Bst6I CTCTTC 3 cut(s) 59, 478, 1200
BstAPI GCANNNNNTGC 3 cut(s) 340, 748, 1054
BstDEI CTNAG 8 cut(s) 6, 118, 870, 1062, 1112, 2319, 2352, 2385
BstDSI CCRYGG 1 cut(s) 573
BstH2I RGCGCY 1 cut(s) 1659
BstHHI GCGC 2 cut(s) 1658, 1883
BstMAI GTCTC 4 cut(s) 9, 1221, 1761, 2342
BstNI CCWGG 6 cut(s) 144, 558, 807, 894, 1466, 1587
BstNSI RCATGY 3 cut(s) 867, 1426, 2047
BstSCI CCNGG 6 cut(s) 142, 556, 805, 892, 1464, 1585
BstSFI CTRYAG 3 cut(s) 614, 1265, 2310
BstSLI GKGCMC 1 cut(s) 496
BstV2I GAAGAC 1 cut(s) 2055
BstX2I RGATCY 3 cut(s) 121, 1711, 2410
BstYI RGATCY 3 cut(s) 121, 1711, 2410
Bsu15I ATCGAT 1 cut(s) 684
Bsu36I CCTNAGG 1 cut(s) 870
BsuI GTATCC 1 cut(s) 124
BsuRI GGCC 9 cut(s) 672, 729, 937, 1149, 1209, 1507, 1543, 1941, 2141
BsuTUI ATCGAT 1 cut(s) 684
BtgI CCRYGG 1 cut(s) 573
BtrI CACGTC 2 cut(s) 1171, 2051
BtsI GCAGTG 1 cut(s) 2558
BtsIMutI CAGTG 6 cut(s) 942, 1099, 1497, 2206, 2558, 2585
CaiI CAGNNNCTG 5 cut(s) 340, 1508, 2088, 2318, 2587
CciI TCATGA 1 cut(s) 2497
CfoI GCGC 2 cut(s) 1658, 1883
Cfr10I RCCGGY 1 cut(s) 725
Cfr13I GGNCC 7 cut(s) 509, 670, 1208, 1505, 1541, 1735, 1939
ClaI ATCGAT 1 cut(s) 684
DdeI CTNAG 8 cut(s) 6, 118, 870, 1062, 1112, 2319, 2352, 2385
DraI TTTAAA 2 cut(s) 75, 927
DrdI GACNNNNNNGTC 3 cut(s) 1081, 2078, 2708
DseDI GACNNNNNNGTC 3 cut(s) 1081, 2078, 2708
EaeI YGGCCR 2 cut(s) 727, 935
Eam1104I CTCTTC 3 cut(s) 59, 478, 1200
EarI CTCTTC 3 cut(s) 59, 478, 1200
Eco130I CCWWGG 1 cut(s) 573
Eco31I GGTCTC 1 cut(s) 1761
Eco47I GGWCC 2 cut(s) 509, 1735
Eco57I CTGAAG 5 cut(s) 123, 720, 959, 1007, 1485
Eco81I CCTNAGG 1 cut(s) 870
Eco88I CYCGRG 2 cut(s) 1549, 2245
EcoO109I RGGNCCY 1 cut(s) 1505
EcoRI GAATTC 1 cut(s) 888
EcoRII CCWGG 6 cut(s) 142, 556, 805, 892, 1464, 1585
EcoT14I CCWWGG 1 cut(s) 573
EcoT22I ATGCAT 1 cut(s) 640
ErhI CCWWGG 1 cut(s) 573
FaqI GGGAC 1 cut(s) 2145
FauI CCCGC 1 cut(s) 754
FbaI TGATCA 1 cut(s) 1447
FblI GTMKAC 3 cut(s) 812, 1105, 2362
FspBI CTAG 4 cut(s) 195, 1932, 1997, 2694
GlaI GCGC 2 cut(s) 1657, 1882
GsaI CCCAGC 3 cut(s) 307, 1009, 1542
GsuI CTGGAG 4 cut(s) 1608, 2242, 2496, 2609
HaeII RGCGCY 1 cut(s) 1659
HaeIII GGCC 9 cut(s) 672, 729, 937, 1149, 1209, 1507, 1543, 1941, 2141
HapII CCGG 3 cut(s) 125, 726, 818
HhaI GCGC 2 cut(s) 1658, 1883
Hin6I GCGC 2 cut(s) 1656, 1881
HinP1I GCGC 2 cut(s) 1656, 1881
HincII GTYRAC 3 cut(s) 1032, 2363, 2667
HindII GTYRAC 3 cut(s) 1032, 2363, 2667
HindIII AAGCTT 2 cut(s) 78, 90
HinfI GANTC 9 cut(s) 623, 772, 850, 1126, 1576, 1775, 2350, 2447, 2623
HpaII CCGG 3 cut(s) 125, 726, 818
HphI GGTGA 5 cut(s) 671, 1071, 1178, 1182, 1674
Hpy166II GTNNAC 7 cut(s) 813, 1032, 1106, 1864, 1968, 2363, 2667
Hpy188III TCNNGA 9 cut(s) 869, 966, 1715, 1760, 2105, 2347, 2498, 2699, 2719
Hpy8I GTNNAC 7 cut(s) 813, 1032, 1106, 1864, 1968, 2363, 2667
HpyAV CCTTC 9 cut(s) 98, 744, 1135, 1554, 1572, 1945, 2424, 2477, 2633
HpyCH4III ACNGT 3 cut(s) 1083, 2080, 2201
HpyCH4IV ACGT 3 cut(s) 1170, 2050, 2060
HpyF3I CTNAG 8 cut(s) 6, 118, 870, 1062, 1112, 2319, 2352, 2385
HpySE526I ACGT 3 cut(s) 1170, 2050, 2060
HspAI GCGC 2 cut(s) 1656, 1881
KpnI GGTACC 1 cut(s) 1178
Ksp22I TGATCA 1 cut(s) 1447
LmnI GCTCC 5 cut(s) 256, 952, 1006, 1634, 2471
LweI GCATC 9 cut(s) 127, 236, 484, 625, 647, 1413, 1801, 2083, 2441
MaeI CTAG 4 cut(s) 195, 1932, 1997, 2694
MaeII ACGT 3 cut(s) 1170, 2050, 2060
MaeIII GTNAC 5 cut(s) 1166, 1891, 2195, 2583, 2696
MbiI CCGCTC 1 cut(s) 940
MfeI CAATTG 1 cut(s) 800
MflI RGATCY 3 cut(s) 121, 1711, 2410
MhlI GDGCHC 1 cut(s) 496
MluCI AATT 7 cut(s) 800, 888, 916, 1156, 1354, 1718, 2522
MlyI GAGTC 6 cut(s) 766, 1570, 1784, 2344, 2441, 2617
MmeI TCCRAC 2 cut(s) 508, 2275
Mph1103I ATGCAT 1 cut(s) 640
MroXI GAANNNNTTC 2 cut(s) 989, 2493
MseI TTAA 8 cut(s) 74, 246, 602, 926, 1245, 1250, 1872, 2229
MslI CAYNNNNRTG 3 cut(s) 1235, 1409, 1809
MspA1I CMGCKG 5 cut(s) 340, 761, 1538, 2241, 2318
MspI CCGG 3 cut(s) 125, 726, 818
MspR9I CCNGG 6 cut(s) 144, 558, 807, 894, 1466, 1587
MunI CAATTG 1 cut(s) 800
Mva1269I GAATGC 4 cut(s) 211, 574, 1122, 2495
MvaI CCWGG 6 cut(s) 144, 558, 807, 894, 1466, 1587
NcoI CCATGG 1 cut(s) 573
NlaIV GGNNCC 3 cut(s) 1176, 1940, 2412
NmuCI GTSAC 4 cut(s) 1166, 2195, 2583, 2696
NsiI ATGCAT 1 cut(s) 640
NspI RCATGY 3 cut(s) 867, 1426, 2047
PaeI GCATGC 1 cut(s) 2047
PaeR7I CTCGAG 1 cut(s) 2245
PagI TCATGA 1 cut(s) 2497
PctI GAATGC 4 cut(s) 211, 574, 1122, 2495
PdmI GAANNNNTTC 2 cut(s) 989, 2493
PfeI GAWTC 3 cut(s) 623, 850, 1126
PfoI TCCNGGA 3 cut(s) 556, 892, 1585
PleI GAGTC 6 cut(s) 766, 1570, 1783, 2344, 2441, 2617
PpsI GAGTC 6 cut(s) 766, 1570, 1783, 2344, 2441, 2617
Psp6I CCWGG 6 cut(s) 142, 556, 805, 892, 1464, 1585
PspFI CCCAGC 3 cut(s) 303, 1005, 1538
PspGI CCWGG 6 cut(s) 142, 556, 805, 892, 1464, 1585
PspN4I GGNNCC 3 cut(s) 1176, 1940, 2412
PspPI GGNCC 7 cut(s) 509, 670, 1208, 1505, 1541, 1735, 1939
PspXI VCTCGAGB 1 cut(s) 2245
PstI CTGCAG 2 cut(s) 618, 2314
PstNI CAGNNNCTG 5 cut(s) 340, 1508, 2088, 2318, 2587
PsuI RGATCY 3 cut(s) 121, 1711, 2410
PvuII CAGCTG 3 cut(s) 340, 1538, 2241
RseI CAYNNNNRTG 3 cut(s) 1235, 1409, 1809
SalI GTCGAC 1 cut(s) 2361
SaqAI TTAA 8 cut(s) 74, 246, 602, 926, 1245, 1250, 1872, 2229
Sau96I GGNCC 7 cut(s) 509, 670, 1208, 1505, 1541, 1735, 1939
SchI GAGTC 6 cut(s) 766, 1570, 1784, 2344, 2441, 2617
ScrFI CCNGG 6 cut(s) 144, 558, 807, 894, 1466, 1587
SduI GDGCHC 1 cut(s) 496
SfaNI GCATC 9 cut(s) 127, 236, 484, 625, 647, 1413, 1801, 2083, 2441
SfcI CTRYAG 3 cut(s) 614, 1265, 2310
Sfr274I CTCGAG 1 cut(s) 2245
SinI GGWCC 2 cut(s) 509, 1735
SlaI CTCGAG 1 cut(s) 2245
SmiMI CAYNNNNRTG 3 cut(s) 1235, 1409, 1809
SmlI CTYRAG 1 cut(s) 2245
SmoI CTYRAG 1 cut(s) 2245
SphI GCATGC 1 cut(s) 2047
Sse9I AATT 7 cut(s) 800, 888, 916, 1156, 1354, 1718, 2522
SsiI CCGC 8 cut(s) 311, 464, 473, 717, 761, 938, 2096, 2316
SspI AATATT 1 cut(s) 705
SspMI CTAG 4 cut(s) 195, 1932, 1997, 2694
StyD4I CCNGG 6 cut(s) 142, 556, 805, 892, 1464, 1585
StyI CCWWGG 1 cut(s) 573
TaaI ACNGT 3 cut(s) 1083, 2080, 2201
TaiI ACGT 3 cut(s) 1173, 2053, 2063
TaqII GACCGA 1 cut(s) 1752
TasI AATT 7 cut(s) 800, 888, 916, 1156, 1354, 1718, 2522
TauI GCSGC 4 cut(s) 475, 719, 940, 2318
TfiI GAWTC 3 cut(s) 623, 850, 1126
Tru1I TTAA 8 cut(s) 74, 246, 602, 926, 1245, 1250, 1872, 2229
Tru9I TTAA 8 cut(s) 74, 246, 602, 926, 1245, 1250, 1872, 2229
TscAI CASTG 6 cut(s) 949, 1099, 1497, 2206, 2565, 2592
TseFI GTSAC 4 cut(s) 1166, 2195, 2583, 2696
Tsp45I GTSAC 4 cut(s) 1166, 2195, 2583, 2696
TspGWI ACGGA 3 cut(s) 2108, 2529, 2621
TspRI CASTG 6 cut(s) 949, 1099, 1497, 2206, 2565, 2592
VpaK11BI GGWCC 2 cut(s) 509, 1735
XapI RAATTY 4 cut(s) 888, 1156, 1354, 2522
XceI RCATGY 3 cut(s) 867, 1426, 2047
XhoI CTCGAG 1 cut(s) 2245
XmiI GTMKAC 3 cut(s) 812, 1105, 2362
XmnI GAANNNNTTC 2 cut(s) 989, 2493
XspI CTAG 4 cut(s) 195, 1932, 1997, 2694
Zsp2I ATGCAT 1 cut(s) 640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.