RLG00000016050

Transcriptional corepressor LEUNIG-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000670
Physical Location & Seq
Forward (+)
3490914 .. 3497614
6701 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016050

Sequence Viewer

Length: 2592 bp
ATGGCTCAGGCCAATTGGGAAGCTGATAAAATGTTGGATGTGTATATATATGATTACCTTCTGAAGAGAAATTTACATGCTTCTGCAAAGGCATTTCAAGCTGAAGGAAAAGTTTCTACAGATCCTGTAGCTATTGATGCACCCGGTGGCTTTCTTTTCGAATGGTGGTCTGTCTTCTGGGACATATTCATCGCTAGGACGAATGAAAAGCACTCTGAAGCAGCTGCATCTTATATTGAGACTCAAGTGAACAAGGCTCGGGAGCTGCAACAGAAGCCTCAGCAGCATCCGCAAATGCAGATGCAGCATCTTTTGCAAAGGCATGCTGCTCAGCAGCAGCAGCAGCAGCATCAACAACAGCAACAACAACAACACCAGCAACAACAACACCCGCAACAACACCCGCAACACCAGCAGCAGCAGCAACAGCAAAGACGAGATGGGACCCAACTTCTTAATGGAACTTCCAATGGGCTTGTTGGCACTGATCCTCTTTCGAGGCAGAACTCTGCAACTGCAAATGTCATGGCAACAAAAATGTACGAGGACAGATTAAAGCCCCCCATACAGAGGGATGCTTTGGATGATGCGGCTATGAAGCAAAGGTTAGGTGACAATATGAATCAGCTTATGGATTCAAATCGTGCATCATTGGTGAAAGTAGCCACAGCAGGTGGCCAGTCTCCCGGTCAAATGCTGCATGGTACACCTGGAGGTATGTTGGGGAATCTTCAACAAGCTCACAATCGGAGTCAGCAACTTCCTGGATTGATGCAGGACATAAAGAGTGAGATGATGAACCCCAGAGCTGCTGGTCCAGAAGGATCATTGATTGGTCTTCATGGATCAAATGAAGGCAGTAGCAATTTGACTCTGAAGGGTTGGCCTCTAACGGTTCGACCTGGAATTCTTCAGCAGCAAAATTCCATGATGCAGTCCTCTCAGCCCTTTAATCAGCTTCAGCTCCAGCAGCAACTTATACTTCAGGCACAACAAAATTTAGCTTCCCCATCTACCAATGACTTGGAATCTAGAAGGCTATCGATGCTCCTCAGTAGAAATATACCTAACGTTGATGTACCTAATGTTGGATCGCCTGTTCAAGTGGGTTGCCCTGTAATGCCTGGTGCAGATGCAGATATGCTTATGAAGTTACAGCAACAGCAGCTGCAAAGCAACAATCAACACCAACACCAACAACAGCAACAATATTCACAGCATCCATTTTCAAGTCAACACCCTCAGAGTTCGAATCAACACATCCAGCAGCAAGAAAAGATCACTGGTGCTGGCAGCATTACAGCTGGTGGTAGCATGTCTAACTCCTTTCAAGGCAATGATCAGGCTCCAAAGAATCAAATGGGGCGAAAGAGGAAACAGCCAGTGTCATCTTCAGGTCCTGCCAATAGTTCAGGGACTGCTAATACCACTGGACCATCCCCCAGTTCACCTTCAACGCCTTCTACTCACACGGCAGGAGATGCGATCTCGGTGCCAACTTTGGCCCATAATAGCGGTTCCTCGAAGTCTCTGCTTATGTTTGCTTCTGATGGTCTAGGCTCAGTTGCCTCGGTGCCAAATAAATTGAATGATATGGACCGATTTGTGGATGATGGATCTTTAGAGGATAATGTTGAATCATTCTTATCACATGATGATGCTGACCCTAGGGATAGAGTTGCTCGGTGTTCAGATGTCAGCAAAGGCTTCACTTTTTCGGAAGTTGGGGTTATTACTGCAAGTTCAAGTAAAGTCGAGTGCTGTCACTTCTCAGCAGATGGGAAAACACTTGCCACTGGTGGGCATGATCGAAAGGCTGTATTGTGGTCTACAGAGTCCTTTGCTGTAAAGTCTACGCTTGAAGAGCATTCTCAGTGGATAACGGATGTTCGATTCAGTCCTAGTATGTCAAGGCTAGCTACATCTTCTGCTGACAAAACTGTCAGGGTCTGGGATGTTGATAATCCTGGCTATTCACTTCGTACTTTTATGGGACATTCTACAACTGTTATGTCACTTGACTTCCACCCTACTAAAGAGGATCTTCTGTGCTCTTGTGATAACAACAGTGAGATAAGATACTGGAGTATCAAGAATGGTAGTTGCATTGGAGTTTCCAAGGGTGGTGCAACTCAGATGAGGTTTCAACCTCGTCTTGGAAGGATGCTTGCTGCTGCAGGTGATACTCTTGTATCCATAATTGATGTAGAGACCGAAGGTTGCACGCTTAAATTACAGGGTCATAAGAACCTCGTCAATTCTGTGTGCTGGGATTCTTCTGGTGAGTATCTAGCCTCTGTGAGTGATGACTCGGTTAAAGTATGGGCAGTTGGCGGCTCCAGTAGCAAAGGTGAATGCCTTTACGAGTTAAGCTGTTCTGGCAACAAATTTCAGACATGCGTCTTCCATCCTACTTATCCATCATTGTTGGTAGTCGGCTGTTATGAGACATTGGAACTTTGGAACATGAGCGAGAACAAGACAATGACCTTGCATGCACATGACAATCTAGTATCTTGTTTGGCAGCGTCAAGTTCTAGTGGCATGGTAGCTTCAGCTAGCCATGATAAGTGCGTGAAGCTATGGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0001558 GO:0001666 GO:0003002 GO:0003006 GO:0005975 GO:0005976 GO:0006355 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009798 GO:0009845 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009943 GO:0009944 GO:0009955 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010073 GO:0010154 GO:0010191 GO:0010214 GO:0010243 GO:0010272 GO:0010393 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0022414 GO:0022603 GO:0022604 GO:0030307 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032504 GO:0033554 GO:0036293 GO:0040008 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0044237 GO:0044238 GO:0045892 GO:0045927 GO:0045934 GO:0045995 GO:0046677 GO:0046898 GO:0048316 GO:0048359 GO:0048507 GO:0048509 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048608 GO:0048609 GO:0048638 GO:0048639 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051510 GO:0051512 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060992 GO:0061458 GO:0065001 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0071704 GO:0080001 GO:0080090 GO:0090351 GO:0097305 GO:1901654 GO:1901698 GO:1901700 GO:1902074 GO:1902183 GO:1902679 GO:1903506 GO:1903507 GO:2000024 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LisH WD40

Protein Analysis

864

Amino Acids

94.42

Weight (kDa)

6.45

Isoelectric Point (pI)

52.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LisH PF08513 10 - 36 2.5e-07 LisH
WD40_Gbeta PF25391 569 - 705 4.1e-11 G protein beta WD-40 repeat protein
Beta-prop_THOC3 PF25174 571 - 634 1.1e-08 THOC3 beta-propeller domain
WD40_MABP1-WDR62_2nd PF24782 572 - 775 6.5e-16 MABP1/WDR62 second WD40 domain
Beta-prop_TEP1_2nd PF25047 572 - 696 2.5e-13 TEP-1 second beta-propeller
EIF3I PF24805 573 - 655 1.4e-06 EIF3I
WD40_WDHD1_1st PF24817 573 - 655 3.9e-12 WDHD1 first WD40 domain
WD40_CDC20-Fz PF24807 578 - 704 1.5e-15 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 579 - 697 1.1e-22 WDR3 first beta-propeller domain
Beta-prop_EML_2 PF23414 579 - 701 7.4e-19 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5 PF25175 580 - 704 4.4e-26 WDR5 beta-propeller domain
WD40_Prp19 PF24814 580 - 776 8.3e-32 Prp19 WD40 domain
Beta-prop_WDR36-Utp21_2nd PF25168 582 - 682 1.4e-07 WDR36/Utp21 second beta-propeller domain
Beta-prop_EML PF23409 583 - 702 6e-07 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR3_2nd PF25172 585 - 696 9.5e-11 WDR3 second beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 589 - 655 4e-07 CAF1B/HIR1 beta-propeller domain
WDR55 PF24796 617 - 863 5.4e-12 WDR55
WD40 PF00400 617 - 652 4.2e-09 WD domain, G-beta repeat
Beta-prop_THOC3 PF25174 623 - 863 4.8e-39 THOC3 beta-propeller domain
Beta-prop_WDR90_POC16_2nd PF23393 634 - 739 7.8e-07 WDR90/POC16, second beta-propeller
Beta-prop_WDR36-Utp21_2nd PF25168 683 - 778 5.7e-07 WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR3_1st PF25173 691 - 777 2.2e-11 WDR3 first beta-propeller domain
Beta-prop_WDR5 PF25175 708 - 862 1.3e-24 WDR5 beta-propeller domain
WD40_WDHD1_1st PF24817 711 - 863 1.7e-14 WDHD1 first WD40 domain
WD40_Gbeta PF25391 713 - 862 1.2e-06 G protein beta WD-40 repeat protein
WD40_CDC20-Fz PF24807 722 - 862 1.2e-07 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_2nd PF25172 728 - 862 2.8e-08 WDR3 second beta-propeller domain
WD40 PF00400 741 - 775 1e-07 WD domain, G-beta repeat
WD40 PF00400 828 - 862 1.3e-06 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000670)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G32551 AT4G32551
fragaria_vesca FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940
malus_domestica MD02G1040200.v1.1 MD08G1139100.v1.1 MD15G1117100.v1.1 MD15G1145100.v1.1
prunus_persica Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.7G235500_v2.0.a1 Prupe.7G235500_v2.0.a1 Prupe.7G235500_v2.0.a1 Prupe.7G235500_v2.0.a1
pyrus_communis pycom02g03350 pycom08g11750 pycom15g10550 pycom15g16250
rosa_chinensis RchiOBHm_Chr2g0089671 RchiOBHm_Chr3g0465211 RchiOBHm_Chr6g0312941
rosa_laevigata RLG00000010283 RLG00000016050
rosa_multiflora Rmu_sc0000665.1_g000023 Rmu_sc0008049.1_g000043 Rmu_sc0008049.1_g000044
rosa_roxburghii Rroxscaffold_2G00151660 Rroxscaffold_7G00156310
rosa_rugosa Rorug02G0002500 Rorug02G0002500 Rorug06G0400700 Rorug06G0400700 Rorug06G0400700 Rorug06G0400700 Rorug06G0400800.1 Rorug06G0400900.1
rosa_samantha Rh2AG047900 Rh2BG046500 Rh2CG048500 Rh2DG047900 Rh6AG517700 Rh6BG529400 Rh6CG533900 Rh6DG520500
rosa_wichuraiana Rw2G004260 Rw5G017770 Rw6G045010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 662, 2168
AasI GACNNNNNNGTC 1 cut(s) 1940
Acc36I ACCTGC 2 cut(s) 662, 2168
AccB1I GGYRCC 2 cut(s) 1492, 1573
AccI GTMKAC 2 cut(s) 1829, 1853
AciI CCGC 6 cut(s) 290, 392, 404, 590, 1515, 2334
AclI AACGTT 1 cut(s) 1071
AclWI GGATC 7 cut(s) 116, 482, 832, 853, 1099, 1624, 2049
AcoI YGGCCR 1 cut(s) 676
AcsI RAATTY 5 cut(s) 70, 906, 922, 997, 2387
AcuI CTGAAG 9 cut(s) 83, 123, 237, 896, 896, 944, 968, 1377, 2538
AdeI CACNNNGTG 1 cut(s) 146
AfaI GTAC 4 cut(s) 542, 706, 1080, 1984
AfiI CCNNNNNNNGG 5 cut(s) 570, 1088, 1606, 1800, 2156
AjnI CCWGG 5 cut(s) 709, 763, 901, 1123, 1966
AloI GAACNNNNNNTCC 2 cut(s) 1083, 1115
Alw21I GWGCWC 1 cut(s) 2054
Alw26I GTCTC 5 cut(s) 233, 687, 1533, 2204, 2441
AlwI GGATC 7 cut(s) 116, 482, 832, 853, 1099, 1624, 2049
AlwNI CAGNNNCTG 5 cut(s) 125, 1168, 1400, 1418, 1950
Ama87I CYCGRG 1 cut(s) 258
AoxI GGCC 4 cut(s) 9, 676, 884, 1503
ApoI RAATTY 5 cut(s) 70, 906, 922, 997, 2387
Asp700I GAANNNNTTC 1 cut(s) 112
AspA2I CCTAGG 1 cut(s) 1667
AspS9I GGNCC 6 cut(s) 444, 815, 1397, 1433, 1504, 1597
AsuC2I CCSGG 2 cut(s) 144, 687
AsuHPI GGTGA 6 cut(s) 623, 667, 1440, 2192, 2294, 2363
AsuII TTCGAA 2 cut(s) 159, 1250
AsuNHI GCTAGC 2 cut(s) 1915, 2558
AvaI CYCGRG 1 cut(s) 258
AvaII GGWCC 5 cut(s) 444, 815, 1397, 1433, 1597
AvrII CCTAGG 1 cut(s) 1667
BaeI ACNNNNGTAYC 8 cut(s) 2071, 2071, 2104, 2104, 2175, 2175, 2208, 2208
BalI TGGCCA 1 cut(s) 678
BanI GGYRCC 2 cut(s) 1492, 1573
BbsI GAAGAC 3 cut(s) 166, 830, 2395
Bbv12I GWGCWC 1 cut(s) 2054
BbvCI CCTCAGC 1 cut(s) 279
BccI CCATC 8 cut(s) 434, 1018, 1444, 1544, 1607, 1772, 2415, 2428
BceAI ACGGC 1 cut(s) 1488
BcgI CGANNNNNNTGC 4 cut(s) 1474, 1508, 1513, 1547
BciT130I CCWGG 5 cut(s) 711, 765, 903, 1125, 1968
BciVI GTATCC 1 cut(s) 2203
BclI TGATCA 1 cut(s) 1339
BcnI CCSGG 2 cut(s) 144, 687
BcoDI GTCTC 5 cut(s) 233, 687, 1533, 2204, 2441
BfmI CTRYAG 4 cut(s) 117, 126, 1830, 2175
BfuAI ACCTGC 2 cut(s) 662, 2168
BfuI GTATCC 1 cut(s) 2203
BlnI CCTAGG 1 cut(s) 1667
BlpI GCTNAGC 1 cut(s) 330
Bme1390I CCNGG 7 cut(s) 144, 687, 711, 765, 903, 1125, 1968
Bme18I GGWCC 5 cut(s) 444, 815, 1397, 1433, 1597
BmeT110I CYCGRG 1 cut(s) 258
BmgT120I GGNCC 6 cut(s) 444, 815, 1397, 1433, 1504, 1597
BmiI GGNNCC 7 cut(s) 445, 446, 1347, 1494, 1519, 1575, 2338
BmrFI CCNGG 7 cut(s) 144, 687, 711, 765, 903, 1125, 1968
BmrI ACTGGG 1 cut(s) 1437
BmtI GCTAGC 2 cut(s) 1919, 2562
BmuI ACTGGG 1 cut(s) 1437
BoxI GACNNNNGTC 1 cut(s) 2399
BpiI GAAGAC 3 cut(s) 166, 830, 2395
BpmI CTGGAG 4 cut(s) 732, 950, 2104, 2323
Bpu10I CCTNAGC 2 cut(s) 6, 279
Bpu1102I GCTNAGC 1 cut(s) 330
Bpu14I TTCGAA 2 cut(s) 159, 1250
BpuEI CTTGAG 1 cut(s) 228
BpuMI CCSGG 2 cut(s) 144, 687
Bsa29I ATCGAT 1 cut(s) 1043
BsaBI GATNNNNATC 1 cut(s) 639
BsaI GGTCTC 1 cut(s) 2204
BsaJI CCNNGG 3 cut(s) 1569, 1667, 2118
Bsc4I CCNNNNNNNGG 5 cut(s) 570, 1088, 1606, 1800, 2156
Bse1I ACTGG 8 cut(s) 679, 1288, 1382, 1435, 1443, 1801, 2087, 2340
Bse3DI GCAATG 1 cut(s) 1342
Bse8I GATNNNNATC 1 cut(s) 639
BseBI CCWGG 5 cut(s) 711, 765, 903, 1125, 1968
BseCI ATCGAT 1 cut(s) 1043
BseDI CCNNGG 3 cut(s) 1569, 1667, 2118
BseJI GATNNNNATC 1 cut(s) 639
BseLI CCNNNNNNNGG 5 cut(s) 570, 1088, 1606, 1800, 2156
BseMI GCAATG 1 cut(s) 1342
BseNI ACTGG 8 cut(s) 679, 1288, 1382, 1435, 1443, 1801, 2087, 2340
BseRI GAGGAG 1 cut(s) 1040
BseYI CCCAGC 1 cut(s) 2268
BsgI GTGCAG 1 cut(s) 1149
BshFI GGCC 4 cut(s) 11, 678, 886, 1505
BshNI GGYRCC 2 cut(s) 1492, 1573
BshVI ATCGAT 1 cut(s) 1043
BsiHKAI GWGCWC 1 cut(s) 2054
BsiHKCI CYCGRG 1 cut(s) 258
BsiSI CCGG 2 cut(s) 144, 687
BslFI GGGAC 4 cut(s) 194, 457, 1429, 2007
BslI CCNNNNNNNGG 5 cut(s) 570, 1088, 1606, 1800, 2156
BsmAI GTCTC 5 cut(s) 233, 687, 1533, 2204, 2441
BsmFI GGGAC 4 cut(s) 194, 457, 1429, 2007
BsmI GAATGC 2 cut(s) 1867, 2360
BsnI GGCC 4 cut(s) 11, 678, 886, 1505
Bso31I GGTCTC 1 cut(s) 2204
BsoBI CYCGRG 1 cut(s) 258
Bsp119I TTCGAA 2 cut(s) 159, 1250
Bsp1286I GDGCHC 1 cut(s) 2054
Bsp1720I GCTNAGC 1 cut(s) 330
BspACI CCGC 6 cut(s) 290, 392, 404, 590, 1515, 2334
BspANI GGCC 4 cut(s) 11, 678, 886, 1505
BspDI ATCGAT 1 cut(s) 1043
BspLI GGNNCC 7 cut(s) 445, 446, 1347, 1494, 1519, 1575, 2338
BspMAI CTGCAG 1 cut(s) 2179
BspMI ACCTGC 2 cut(s) 662, 2168
BspOI GCTAGC 2 cut(s) 1919, 2562
BspPI GGATC 7 cut(s) 116, 482, 832, 853, 1099, 1624, 2049
BspQI GCTCTTC 1 cut(s) 1857
BspT104I TTCGAA 2 cut(s) 159, 1250
BspT107I GGYRCC 2 cut(s) 1492, 1573
BspTNI GGTCTC 1 cut(s) 2204
BsrDI GCAATG 1 cut(s) 1342
BsrI ACTGG 8 cut(s) 679, 1288, 1382, 1435, 1443, 1801, 2087, 2340
BssECI CCNNGG 3 cut(s) 1569, 1667, 2118
BssT1I CCWWGG 2 cut(s) 1667, 2118
Bst2UI CCWGG 5 cut(s) 711, 765, 903, 1125, 1968
Bst4CI ACNGT 4 cut(s) 895, 1942, 2008, 2069
Bst6I CTCTTC 2 cut(s) 59, 1857
BstAPI GCANNNNNTGC 2 cut(s) 313, 1481
BstBI TTCGAA 2 cut(s) 159, 1250
BstC8I GCNNGC 7 cut(s) 324, 1291, 1917, 2169, 2225, 2496, 2560
BstMAI GTCTC 5 cut(s) 233, 687, 1533, 2204, 2441
BstNI CCWGG 5 cut(s) 711, 765, 903, 1125, 1968
BstNSI RCATGY 5 cut(s) 80, 326, 1318, 2400, 2498
BstPAI GACNNNNGTC 1 cut(s) 2399
BstSCI CCNGG 7 cut(s) 142, 685, 709, 763, 901, 1123, 1966
BstSFI CTRYAG 4 cut(s) 117, 126, 1830, 2175
BstV2I GAAGAC 3 cut(s) 166, 830, 2395
BstX2I RGATCY 3 cut(s) 121, 1616, 2041
BstXI CCANNNNNNTGG 1 cut(s) 1024
BstYI RGATCY 3 cut(s) 121, 1616, 2041
Bsu15I ATCGAT 1 cut(s) 1043
BsuI GTATCC 1 cut(s) 2203
BsuRI GGCC 4 cut(s) 11, 678, 886, 1505
BsuTUI ATCGAT 1 cut(s) 1043
BtgZI GCGATG 1 cut(s) 175
BtsIMutI CAGTG 7 cut(s) 483, 1281, 1389, 1428, 1794, 1880, 2074
BveI ACCTGC 2 cut(s) 662, 2168
Cac8I GCNNGC 7 cut(s) 324, 1291, 1917, 2169, 2225, 2496, 2560
CaiI CAGNNNCTG 5 cut(s) 125, 1168, 1400, 1418, 1950
Cfr13I GGNCC 6 cut(s) 444, 815, 1397, 1433, 1504, 1597
ClaI ATCGAT 1 cut(s) 1043
CseI GACGC 2 cut(s) 2389, 2517
Csp6I GTAC 4 cut(s) 541, 705, 1079, 1983
CviQI GTAC 4 cut(s) 541, 705, 1079, 1983
DraIII CACNNNGTG 1 cut(s) 146
DrdI GACNNNNNNGTC 1 cut(s) 1940
DseDI GACNNNNNNGTC 1 cut(s) 1940
EaeI YGGCCR 1 cut(s) 676
Eam1104I CTCTTC 2 cut(s) 59, 1857
EarI CTCTTC 2 cut(s) 59, 1857
Eco130I CCWWGG 2 cut(s) 1667, 2118
Eco31I GGTCTC 1 cut(s) 2204
Eco47I GGWCC 5 cut(s) 444, 815, 1397, 1433, 1597
Eco57I CTGAAG 9 cut(s) 83, 123, 237, 896, 896, 944, 968, 1377, 2538
Eco88I CYCGRG 1 cut(s) 258
EcoO109I RGGNCCY 2 cut(s) 444, 1397
EcoRI GAATTC 1 cut(s) 906
EcoRII CCWGG 5 cut(s) 709, 763, 901, 1123, 1966
EcoT14I CCWWGG 2 cut(s) 1667, 2118
ErhI CCWWGG 2 cut(s) 1667, 2118
FalI AAGNNNNNCTT 2 cut(s) 2028, 2060
FaqI GGGAC 4 cut(s) 194, 457, 1429, 2007
FauI CCCGC 2 cut(s) 399, 411
FbaI TGATCA 1 cut(s) 1339
FblI GTMKAC 2 cut(s) 1829, 1853
GsaI CCCAGC 1 cut(s) 2272
GsuI CTGGAG 4 cut(s) 732, 950, 2104, 2323
HaeIII GGCC 4 cut(s) 11, 678, 886, 1505
HapII CCGG 2 cut(s) 144, 687
HgaI GACGC 2 cut(s) 2389, 2517
HincII GTYRAC 1 cut(s) 1235
HindII GTYRAC 1 cut(s) 1235
HpaII CCGG 2 cut(s) 144, 687
HphI GGTGA 6 cut(s) 623, 667, 1440, 2192, 2294, 2363
Hpy166II GTNNAC 6 cut(s) 250, 707, 1235, 1448, 1830, 1854
Hpy188III TCNNGA 4 cut(s) 260, 818, 1032, 2092
Hpy8I GTNNAC 6 cut(s) 250, 707, 1235, 1448, 1830, 1854
HpyCH4III ACNGT 4 cut(s) 895, 1942, 2008, 2069
HpyCH4IV ACGT 1 cut(s) 1071
HpySE526I ACGT 1 cut(s) 1071
KflI GGGWCCC 1 cut(s) 444
Ksp22I TGATCA 1 cut(s) 1339
LguI GCTCTTC 1 cut(s) 1857
LmnI GCTCC 5 cut(s) 262, 969, 1053, 1351, 2342
MaeII ACGT 1 cut(s) 1071
MaeIII GTNAC 4 cut(s) 611, 1152, 1763, 2013
MfeI CAATTG 1 cut(s) 13
MflI RGATCY 3 cut(s) 121, 1616, 2041
MhlI GDGCHC 1 cut(s) 2054
MlsI TGGCCA 1 cut(s) 678
MluNI TGGCCA 1 cut(s) 678
MlyI GAGTC 5 cut(s) 235, 760, 865, 1844, 2303
MmeI TCCRAC 2 cut(s) 15, 1069
Mox20I TGGCCA 1 cut(s) 678
MroXI GAANNNNTTC 1 cut(s) 112
MscI TGGCCA 1 cut(s) 678
MseI TTAA 6 cut(s) 456, 554, 951, 2229, 2316, 2369
MslI CAYNNNNRTG 2 cut(s) 1656, 2499
Msp20I TGGCCA 1 cut(s) 678
MspA1I CMGCKG 3 cut(s) 224, 1168, 1304
MspI CCGG 2 cut(s) 144, 687
MspR9I CCNGG 7 cut(s) 144, 687, 711, 765, 903, 1125, 1968
MunI CAATTG 1 cut(s) 13
Mva1269I GAATGC 2 cut(s) 1867, 2360
MvaI CCWGG 5 cut(s) 711, 765, 903, 1125, 1968
NciI CCSGG 2 cut(s) 144, 687
NheI GCTAGC 2 cut(s) 1915, 2558
NlaIV GGNNCC 7 cut(s) 445, 446, 1347, 1494, 1519, 1575, 2338
NmuCI GTSAC 3 cut(s) 611, 1763, 2013
NspI RCATGY 5 cut(s) 80, 326, 1318, 2400, 2498
NspV TTCGAA 2 cut(s) 159, 1250
PaeI GCATGC 2 cut(s) 326, 2498
PaqCI CACCTGC 2 cut(s) 662, 2168
PciSI GCTCTTC 1 cut(s) 1857
PctI GAATGC 2 cut(s) 1867, 2360
PdmI GAANNNNTTC 1 cut(s) 112
PfeI GAWTC 9 cut(s) 622, 635, 727, 1028, 1252, 1354, 1637, 1893, 2273
PfoI TCCNGGA 1 cut(s) 763
PleI GAGTC 5 cut(s) 235, 759, 865, 1843, 2303
PpsI GAGTC 5 cut(s) 235, 759, 865, 1843, 2303
PpuMI RGGWCCY 2 cut(s) 444, 1397
PshAI GACNNNNGTC 1 cut(s) 2399
Psp1406I AACGTT 1 cut(s) 1071
Psp5II RGGWCCY 2 cut(s) 444, 1397
Psp6I CCWGG 5 cut(s) 709, 763, 901, 1123, 1966
PspFI CCCAGC 1 cut(s) 2268
PspGI CCWGG 5 cut(s) 709, 763, 901, 1123, 1966
PspN4I GGNNCC 7 cut(s) 445, 446, 1347, 1494, 1519, 1575, 2338
PspPI GGNCC 6 cut(s) 444, 815, 1397, 1433, 1504, 1597
PspPPI RGGWCCY 2 cut(s) 444, 1397
PstI CTGCAG 1 cut(s) 2179
PstNI CAGNNNCTG 5 cut(s) 125, 1168, 1400, 1418, 1950
PsuI RGATCY 3 cut(s) 121, 1616, 2041
PvuII CAGCTG 3 cut(s) 224, 1168, 1304
RsaI GTAC 4 cut(s) 542, 706, 1080, 1984
RsaNI GTAC 4 cut(s) 541, 705, 1079, 1983
RseI CAYNNNNRTG 2 cut(s) 1656, 2499
SapI GCTCTTC 1 cut(s) 1857
SaqAI TTAA 6 cut(s) 456, 554, 951, 2229, 2316, 2369
Sau96I GGNCC 6 cut(s) 444, 815, 1397, 1433, 1504, 1597
SchI GAGTC 5 cut(s) 235, 760, 865, 1844, 2303
ScrFI CCNGG 7 cut(s) 144, 687, 711, 765, 903, 1125, 1968
SduI GDGCHC 1 cut(s) 2054
SfcI CTRYAG 4 cut(s) 117, 126, 1830, 2175
SfuI TTCGAA 2 cut(s) 159, 1250
SinI GGWCC 5 cut(s) 444, 815, 1397, 1433, 1597
SmiMI CAYNNNNRTG 2 cut(s) 1656, 2499
SmlI CTYRAG 1 cut(s) 243
SmoI CTYRAG 1 cut(s) 243
SphI GCATGC 2 cut(s) 326, 2498
SsiI CCGC 6 cut(s) 290, 392, 404, 590, 1515, 2334
SspI AATATT 1 cut(s) 1211
StyD4I CCNGG 7 cut(s) 142, 685, 709, 763, 901, 1123, 1966
StyI CCWWGG 2 cut(s) 1667, 2118
TaaI ACNGT 4 cut(s) 895, 1942, 2008, 2069
TaiI ACGT 1 cut(s) 1074
TaqI TCGA 9 cut(s) 159, 497, 898, 1043, 1250, 1523, 1755, 1810, 1891
TaqII GACCGA 2 cut(s) 1614, 2228
TauI GCSGC 2 cut(s) 593, 2337
TfiI GAWTC 9 cut(s) 622, 635, 727, 1028, 1252, 1354, 1637, 1893, 2273
Tru1I TTAA 6 cut(s) 456, 554, 951, 2229, 2316, 2369
Tru9I TTAA 6 cut(s) 456, 554, 951, 2229, 2316, 2369
TscAI CASTG 7 cut(s) 490, 1288, 1389, 1435, 1801, 1880, 2074
TseFI GTSAC 3 cut(s) 611, 1763, 2013
Tsp45I GTSAC 3 cut(s) 611, 1763, 2013
TspDTI ATGAA 8 cut(s) 178, 219, 611, 635, 812, 830, 867, 1163
TspGWI ACGGA 1 cut(s) 1898
TspRI CASTG 7 cut(s) 490, 1288, 1389, 1435, 1801, 1880, 2074
VpaK11BI GGWCC 5 cut(s) 444, 815, 1397, 1433, 1597
XapI RAATTY 5 cut(s) 70, 906, 922, 997, 2387
XbaI TCTAGA 1 cut(s) 1031
XceI RCATGY 5 cut(s) 80, 326, 1318, 2400, 2498
XcmI CCANNNNNNNNNTGG 1 cut(s) 455
XmaJI CCTAGG 1 cut(s) 1667
XmiI GTMKAC 2 cut(s) 1829, 1853
XmnI GAANNNNTTC 1 cut(s) 112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.