pycom02g03350

Transcriptional corepressor LEUNIG-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0000670
Physical Location & Seq
Forward (+)
2213846 .. 2219542
5697 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g03350.14

Sequence Viewer

Length: 2568 bp
ATGTCTCAGAGCCAGACCAATTGGGAAGCTGATAAAATGTTGGATGTGTATATCTATGATTACTTTATGAAGAGAAAATTACATGCTTCTGCAAAGGCATTTCAAGATGAAGGAAAAGTTTCTACGGATCCTGTAGCTATTGATGCACCTGGTGGCTTTCTTTTTGAATGGTGGTCTGTCTTTTGGGACATATTCATTGCTAGGACGAATGAGAAGCATTCAGAAGCAGCTGCATCTTACATAGAGACTCAAGTGATAAAGGCGAGGGAGCAGCAGCAGAAGCCTCAGCAGCAAGATCAAATGCAAATGCAGCAGCTTCTATTACAAAGGCAGCAACAGCAGCAGCGACAACAACAACAACAACAACAGCAGCAGCAGCCGCAGCAGCAACAGCAACAGCAGCGTCGAGATGGGACCCAGCTTCATAATGGCACTGCCAATGATTCTCTTTTGAGGCAGAACCCGGCAACTGCAAATTCTATGGCAACAAAAATGTACGAGGAGAGATTAAAGCTTCCACCACAGAGAGATGCTATGGATGATGCAGCTATCAAGCAAAGGTTAGGCGATAATATGAGTCAGCTTTTGGATCCCAATCATGCGTCGATGATGAAAGCAGCCACAGCAGGTGGCCTGCCTCCTGGTCAAATGCTGCATGGTACACCTGAAGGTGTGTTGGGGAATCTTCAACAACCTCACAGTCGGAGTCAGCAACTTCCTGGTTCTTCACAGGACATAAAGAGTGAGGTGATGAACCCCAGAGCTGTTGCTTCAGAAGGATCACTGATTGGTGCTCACGGATCAAATCAAGGCAATAACAATTTGACTCTGAAAGGATGGCCTTTAACGGGATTTGATCGGCTTCGATCTGGGATTCTTCAGCAGCAAAATTCTTTGATGCAGTCCCCACAACCCTATAATCAACTTCTGCAACAGCAACAACTTATGCTAGCACAACAAAATTTGGCTTCCCCATCTTCCAATGACTTGGACAATAGACGGATGAAAATGCTTCTCAACAATCGAAATTTGGTTATTGGGAAGGATGGTCAATTAAGTTCTGTCGATGTACCTAATGTTGGATCACCAGTGCAAGTTGGTTGCCCGGTCTTGCCTCGTGGAGATGCTGACATGCTGATGAAGTTACAGCAGCAGCAGATGCAAAGCAACAATCAACAGCAGCAGCCATATTCGCAGCATCCGCTTTCAGGTCAGCATTCTCAGAATTCAAGCCAACACCTTCAGCAGCATGAAAAACTTATGGGTTCTGGCAGCGTGGCGCCAGATGGTAGCATGCCTAACACCTTACAAGGGAATGATCAGGCTTCAAAGAATCAACTTGGGCGAAAGAGAAAGCTGCCAGTGTCATCTTCGGGTCCTGCCAATAGCTCAGGGACAGTTAATACCACAGGGCCATCTCTCAGTTCACCTTCAACGCCTTCTACTAACACAGCAGGAGATGTCATGTCTATGCCAACTTTACCCCAAAATGGTGGTTCGTCGAAGTCTCTACTTATGTTTGGCTCTGATGGCTTGGGCTCACTTGCATCAGCGCCAAATAAATTGACTGATGTAGACCGTTTTGTGGACGATGGATCTTTGGAGGATAACGTTGAGTCGTTCTTATCACATGATGATGCTGACCCTAGAGGTAGAGTCGTTCGGTGTTCAGATGTCAGCAAAGGCTTCAGTTTTACGGAAGTCCAGCTTATTCCTGCAAGTACAAATAAAGTTGAATGTTGCCACTTCTCTTCAGATGGAAAATCACTTGCCACTGGTGGGCATGACCGAAAGGCTGTATTGTGGTGCACTGAAACTTTTAGTGTCAAGTCTACACTTGAAGAGCATTCTCATTGGATAACTGACGTTCGCTTTAGTCCTAGCATGTCAAGGCTTGCTACATCTTCTGCTGACAAAACCGTCAGGGTTTGGGATGCTGATAACCCTGGATATTCACTACGTACTTTTACGGGACATTCTACCACTGTCACGTCGGTGGACTTCCACCCCAGCAAAGAGGACTTTCTCTGCTCCTGTGATAACGACAGTGAGATACGGTACTGGAGTATCAAGAACGGTAGTTGTGCTGGAGTTTTCAAGGGTGGTGCAACTCAGGCGAGGTTTCAACCGCGTTTTGGAAGAAACCTTGCTGCTGCAGCAGATAATGTCGTATCCATCTTGGATGTCGAAACACAAATTTGCAGGCTTAAGTTACAGGGTCATAAAAGCGCTGTCCATTCTGTGTGCTGGGATCCTTCTGGCGAGAATCTAGCATCAGTGAGTGATGATTTGGTGCGAGTGTGGACAGTTGGTTCCAGCTGCAAAGGGGAATTCATTCACGAGTTGAGCTGTTCTGGCAACAAATTCAATACGTGCGTGTTCCATCCTAGTTATCCTGCATTGTTGATCATTGGCTGTTATGAGAATTTGGAGCTTTGGAACATGGCCGAGAACAAGACAATGACTCTGCGCGCTCATGACAAGCTAGTGTCTTCTCTGGCGGTATCAAGTGCTACGGGGTTAGTTGCTTCAGCCAGCCATGACAAGTGCGTCAAGCTCTGGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0001558 GO:0001666 GO:0003002 GO:0003006 GO:0005975 GO:0005976 GO:0006355 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009798 GO:0009845 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009943 GO:0009944 GO:0009955 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010073 GO:0010154 GO:0010191 GO:0010214 GO:0010243 GO:0010272 GO:0010393 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0022414 GO:0022603 GO:0022604 GO:0030307 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032504 GO:0033554 GO:0036293 GO:0040008 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0044237 GO:0044238 GO:0045892 GO:0045927 GO:0045934 GO:0045995 GO:0046677 GO:0046898 GO:0048316 GO:0048359 GO:0048507 GO:0048509 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048608 GO:0048609 GO:0048638 GO:0048639 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051510 GO:0051512 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060992 GO:0061458 GO:0065001 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0071704 GO:0080001 GO:0080090 GO:0090351 GO:0097305 GO:1901654 GO:1901698 GO:1901700 GO:1902074 GO:1902183 GO:1902679 GO:1903506 GO:1903507 GO:2000024 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LisH WD40

Protein Analysis

856

Amino Acids

93.93

Weight (kDa)

6.67

Isoelectric Point (pI)

50.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000670)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G32551 AT4G32551
fragaria_vesca FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940
malus_domestica MD02G1040200.v1.1 MD08G1139100.v1.1 MD15G1117100.v1.1 MD15G1145100.v1.1
prunus_persica Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.7G235500_v2.0.a1 Prupe.7G235500_v2.0.a1 Prupe.7G235500_v2.0.a1 Prupe.7G235500_v2.0.a1
pyrus_communis pycom02g03350 pycom08g11750 pycom15g10550 pycom15g16250
rosa_chinensis RchiOBHm_Chr2g0089671 RchiOBHm_Chr3g0465211 RchiOBHm_Chr6g0312941
rosa_laevigata RLG00000010283 RLG00000016050
rosa_multiflora Rmu_sc0000665.1_g000023 Rmu_sc0008049.1_g000043 Rmu_sc0008049.1_g000044
rosa_roxburghii Rroxscaffold_2G00151660 Rroxscaffold_7G00156310
rosa_rugosa Rorug02G0002500 Rorug02G0002500 Rorug06G0400700 Rorug06G0400700 Rorug06G0400700 Rorug06G0400700 Rorug06G0400800.1 Rorug06G0400900.1
rosa_samantha Rh2AG047900 Rh2BG046500 Rh2CG048500 Rh2DG047900 Rh6AG517700 Rh6BG529400 Rh6CG533900 Rh6DG520500
rosa_wichuraiana Rw2G004260 Rw5G017770 Rw6G045010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 617
AasI GACNNNNNNGTC 2 cut(s) 1919, 2549
Acc36I ACCTGC 1 cut(s) 617
AccB1I GGYRCC 1 cut(s) 1279
AccI GTMKAC 2 cut(s) 1575, 1832
AccII CGCG 2 cut(s) 2131, 2472
AciI CCGC 4 cut(s) 380, 1202, 2129, 2501
AclI AACGTT 1 cut(s) 1611
AcoI YGGCCR 1 cut(s) 2445
AcsI RAATTY 9 cut(s) 475, 889, 961, 1027, 1225, 2196, 2330, 2363, 2425
AcuI CTGAAG 7 cut(s) 687, 756, 863, 1226, 1672, 1737, 2514
AcyI GRCGYC 1 cut(s) 1280
AdeI CACNNNGTG 1 cut(s) 152
AfaI GTAC 6 cut(s) 497, 661, 1071, 1723, 1963, 2060
AfeI AGCGCT 1 cut(s) 2230
AfiI CCNNNNNNNGG 8 cut(s) 848, 1079, 1208, 1311, 1490, 1585, 1779, 2135
AflII CTTAAG 1 cut(s) 2207
AjiI CACGTC 1 cut(s) 1992
AjnI CCWGG 4 cut(s) 148, 640, 718, 1945
AleI CACNNNNGTG 1 cut(s) 1994
AloI GAACNNNNNNTCC 2 cut(s) 2296, 2328
Alw21I GWGCWC 2 cut(s) 796, 1811
Alw26I GTCTC 3 cut(s) 9, 239, 1512
Alw44I GTGCAC 1 cut(s) 1807
Aor51HI AGCGCT 1 cut(s) 2230
AoxI GGCC 4 cut(s) 631, 839, 1412, 2445
ApaLI GTGCAC 1 cut(s) 1807
ApoI RAATTY 9 cut(s) 475, 889, 961, 1027, 1225, 2196, 2330, 2363, 2425
Asp700I GAANNNNTTC 2 cut(s) 118, 2334
AspLEI GCGC 5 cut(s) 1282, 1555, 2231, 2472, 2474
AspS9I GGNCC 3 cut(s) 414, 1376, 1412
AsuC2I CCSGG 2 cut(s) 464, 1106
AsuHPI GGTGA 3 cut(s) 760, 1077, 1419
AsuNHI GCTAGC 1 cut(s) 949
AvaII GGWCC 2 cut(s) 414, 1376
BaeGI GKGCMC 1 cut(s) 1811
BaeI ACNNNNGTAYC 4 cut(s) 2050, 2050, 2083, 2083
BamHI GGATCC 3 cut(s) 127, 589, 2251
BanI GGYRCC 1 cut(s) 1279
BanII GRGCYC 1 cut(s) 1541
BauI CACGAG 2 cut(s) 1116, 2339
BbsI GAAGAC 1 cut(s) 2484
Bbv12I GWGCWC 2 cut(s) 796, 1811
BbvCI CCTCAGC 1 cut(s) 285
BciT130I CCWGG 4 cut(s) 150, 642, 720, 1947
BciVI GTATCC 1 cut(s) 2182
BclI TGATCA 2 cut(s) 1318, 2406
BcnI CCSGG 2 cut(s) 464, 1106
BcoDI GTCTC 3 cut(s) 9, 239, 1512
BfaI CTAG 7 cut(s) 201, 950, 1647, 1881, 2270, 2388, 2486
BfmI CTRYAG 2 cut(s) 132, 2154
BfoI RGCGCY 3 cut(s) 1283, 1556, 2232
BfrI CTTAAG 1 cut(s) 2207
BfuAI ACCTGC 1 cut(s) 617
BfuI GTATCC 1 cut(s) 2182
Bme1390I CCNGG 6 cut(s) 150, 464, 642, 720, 1106, 1947
Bme18I GGWCC 2 cut(s) 414, 1376
BmgBI CACGTC 1 cut(s) 1992
BmgT120I GGNCC 3 cut(s) 414, 1376, 1412
BmiI GGNNCC 8 cut(s) 129, 415, 416, 591, 1281, 1377, 2253, 2314
BmrFI CCNGG 6 cut(s) 150, 464, 642, 720, 1106, 1947
BmtI GCTAGC 1 cut(s) 953
BpiI GAAGAC 1 cut(s) 2484
BpmI CTGGAG 2 cut(s) 2083, 2109
Bpu10I CCTNAGC 2 cut(s) 285, 1390
BpuEI CTTGAG 1 cut(s) 234
BpuMI CCSGG 2 cut(s) 464, 1106
BsaAI YACGTR 2 cut(s) 1961, 2373
BsaBI GATNNNNATC 1 cut(s) 594
BsaHI GRCGYC 1 cut(s) 1280
BsaJI CCNNGG 1 cut(s) 1945
Bsc4I CCNNNNNNNGG 8 cut(s) 848, 1079, 1208, 1311, 1490, 1585, 1779, 2135
Bse1I ACTGG 4 cut(s) 1088, 1361, 1780, 2066
Bse3DI GCAATG 1 cut(s) 195
Bse8I GATNNNNATC 1 cut(s) 594
BseBI CCWGG 4 cut(s) 150, 642, 720, 1947
BseDI CCNNGG 1 cut(s) 1945
BseGI GGATG 9 cut(s) 49, 544, 842, 1008, 1051, 1198, 1939, 2188, 2383
BseJI GATNNNNATC 1 cut(s) 594
BseLI CCNNNNNNNGG 8 cut(s) 848, 1079, 1208, 1311, 1490, 1585, 1779, 2135
BseMI GCAATG 1 cut(s) 195
BseMII CTCAG 6 cut(s) 20, 299, 1235, 1404, 1435, 2126
BseNI ACTGG 4 cut(s) 1088, 1361, 1780, 2066
BsePI GCGCGC 1 cut(s) 2470
BseRI GAGGAG 1 cut(s) 515
BseSI GKGCMC 1 cut(s) 1811
BseYI CCCAGC 3 cut(s) 417, 2009, 2247
Bsh1236I CGCG 2 cut(s) 2131, 2472
BshFI GGCC 4 cut(s) 633, 841, 1414, 2447
BshNI GGYRCC 1 cut(s) 1279
BsiHKAI GWGCWC 2 cut(s) 796, 1811
BsiSI CCGG 2 cut(s) 464, 1106
BslFI GGGAC 5 cut(s) 200, 427, 889, 1408, 1986
BslI CCNNNNNNNGG 8 cut(s) 848, 1079, 1208, 1311, 1490, 1585, 1779, 2135
BsmAI GTCTC 3 cut(s) 9, 239, 1512
BsmFI GGGAC 5 cut(s) 200, 427, 889, 1408, 1986
BsmI GAATGC 3 cut(s) 217, 1216, 1846
BsnI GGCC 4 cut(s) 633, 841, 1414, 2447
Bsp1286I GDGCHC 3 cut(s) 796, 1541, 1811
BspACI CCGC 4 cut(s) 380, 1202, 2129, 2501
BspANI GGCC 4 cut(s) 633, 841, 1414, 2447
BspCNI CTCAG 6 cut(s) 19, 298, 1234, 1403, 1434, 2125
BspFNI CGCG 2 cut(s) 2131, 2472
BspHI TCATGA 1 cut(s) 2476
BspLI GGNNCC 8 cut(s) 129, 415, 416, 591, 1281, 1377, 2253, 2314
BspMAI CTGCAG 1 cut(s) 2158
BspMI ACCTGC 1 cut(s) 617
BspOI GCTAGC 1 cut(s) 953
BspQI GCTCTTC 1 cut(s) 1836
BspT107I GGYRCC 1 cut(s) 1279
BspTI CTTAAG 1 cut(s) 2207
BsrDI GCAATG 1 cut(s) 195
BsrI ACTGG 4 cut(s) 1088, 1361, 1780, 2066
BssECI CCNNGG 1 cut(s) 1945
BssHII GCGCGC 1 cut(s) 2470
BssNI GRCGYC 1 cut(s) 1280
BssSI CACGAG 2 cut(s) 1116, 2339
Bst2BI CACGAG 2 cut(s) 1116, 2339
Bst2UI CCWGG 4 cut(s) 150, 642, 720, 1947
Bst4CI ACNGT 9 cut(s) 701, 1399, 1580, 1921, 1987, 2048, 2058, 2078, 2308
Bst6I CTCTTC 3 cut(s) 65, 1756, 1836
BstACI GRCGYC 1 cut(s) 1280
BstAFI CTTAAG 1 cut(s) 2207
BstAPI GCANNNNNTGC 1 cut(s) 1159
BstBAI YACGTR 2 cut(s) 1961, 2373
BstC8I GCNNGC 7 cut(s) 635, 951, 1295, 1896, 2204, 2472, 2536
BstDEI CTNAG 6 cut(s) 6, 285, 1221, 1390, 1421, 2112
BstF5I GGATG 9 cut(s) 49, 544, 842, 1008, 1051, 1198, 1939, 2188, 2383
BstFNI CGCG 2 cut(s) 2131, 2472
BstH2I RGCGCY 3 cut(s) 1283, 1556, 2232
BstHHI GCGC 5 cut(s) 1282, 1555, 2231, 2472, 2474
BstMAI GTCTC 3 cut(s) 9, 239, 1512
BstNI CCWGG 4 cut(s) 150, 642, 720, 1947
BstNSI RCATGY 4 cut(s) 86, 1135, 1297, 1888
BstSCI CCNGG 6 cut(s) 148, 462, 640, 718, 1104, 1945
BstSFI CTRYAG 2 cut(s) 132, 2154
BstSLI GKGCMC 1 cut(s) 1811
BstSNI TACGTA 1 cut(s) 1961
BstUI CGCG 2 cut(s) 2131, 2472
BstV2I GAAGAC 1 cut(s) 2484
BstX2I RGATCY 4 cut(s) 127, 589, 1595, 2251
BstXI CCANNNNNNTGG 2 cut(s) 988, 1493
BstYI RGATCY 4 cut(s) 127, 589, 1595, 2251
BsuI GTATCC 1 cut(s) 2182
BsuRI GGCC 4 cut(s) 633, 841, 1414, 2447
BtrI CACGTC 1 cut(s) 1992
BtsCI GGATG 9 cut(s) 49, 544, 842, 1008, 1051, 1198, 1939, 2188, 2383
BtsI GCAGTG 1 cut(s) 432
BtsIMutI CAGTG 9 cut(s) 432, 782, 1095, 1368, 1773, 1809, 1983, 2053, 2283
BveI ACCTGC 1 cut(s) 617
Cac8I GCNNGC 7 cut(s) 635, 951, 1295, 1896, 2204, 2472, 2536
CciI TCATGA 1 cut(s) 2476
CfoI GCGC 5 cut(s) 1282, 1555, 2231, 2472, 2474
Cfr13I GGNCC 3 cut(s) 414, 1376, 1412
CseI GACGC 3 cut(s) 392, 591, 2539
CsiI ACCWGGT 1 cut(s) 148
Csp6I GTAC 6 cut(s) 496, 660, 1070, 1722, 1962, 2059
CviQI GTAC 6 cut(s) 496, 660, 1070, 1722, 1962, 2059
DdeI CTNAG 6 cut(s) 6, 285, 1221, 1390, 1421, 2112
DinI GGCGCC 1 cut(s) 1281
DraIII CACNNNGTG 1 cut(s) 152
DrdI GACNNNNNNGTC 2 cut(s) 1919, 2549
DseDI GACNNNNNNGTC 2 cut(s) 1919, 2549
EaeI YGGCCR 1 cut(s) 2445
Eam1104I CTCTTC 3 cut(s) 65, 1756, 1836
EarI CTCTTC 3 cut(s) 65, 1756, 1836
Eco105I TACGTA 1 cut(s) 1961
Eco24I GRGCYC 1 cut(s) 1541
Eco47I GGWCC 2 cut(s) 414, 1376
Eco47III AGCGCT 1 cut(s) 2230
Eco57I CTGAAG 7 cut(s) 687, 756, 863, 1226, 1672, 1737, 2514
EcoO109I RGGNCCY 2 cut(s) 414, 1376
EcoRI GAATTC 2 cut(s) 1225, 2330
EcoRII CCWGG 4 cut(s) 148, 640, 718, 1945
EcoT38I GRGCYC 1 cut(s) 1541
EgeI GGCGCC 1 cut(s) 1281
EheI GGCGCC 1 cut(s) 1281
FalI AAGNNNNNCTT 2 cut(s) 1692, 1724
FaqI GGGAC 5 cut(s) 200, 427, 889, 1408, 1986
FbaI TGATCA 2 cut(s) 1318, 2406
FblI GTMKAC 2 cut(s) 1575, 1832
FokI GGATG 9 cut(s) 56, 551, 849, 1015, 1058, 1185, 1946, 2195, 2370
FriOI GRGCYC 1 cut(s) 1541
FspBI CTAG 7 cut(s) 201, 950, 1647, 1881, 2270, 2388, 2486
GlaI GCGC 5 cut(s) 1281, 1554, 2230, 2471, 2473
GsaI CCCAGC 3 cut(s) 421, 2013, 2251
GsuI CTGGAG 2 cut(s) 2083, 2109
HaeII RGCGCY 3 cut(s) 1283, 1556, 2232
HaeIII GGCC 4 cut(s) 633, 841, 1414, 2447
HapII CCGG 2 cut(s) 464, 1106
HgaI GACGC 3 cut(s) 392, 591, 2539
HhaI GCGC 5 cut(s) 1282, 1555, 2231, 2472, 2474
Hin1I GRCGYC 1 cut(s) 1280
Hin6I GCGC 5 cut(s) 1280, 1553, 2229, 2470, 2472
HinP1I GCGC 5 cut(s) 1280, 1553, 2229, 2470, 2472
HindIII AAGCTT 1 cut(s) 512
HpaII CCGG 2 cut(s) 464, 1106
HphI GGTGA 3 cut(s) 760, 1077, 1419
Hpy166II GTNNAC 8 cut(s) 662, 1427, 1576, 1588, 1809, 1833, 1999, 2304
Hpy188I TCNGA 9 cut(s) 9, 223, 705, 775, 831, 1224, 1528, 1672, 1756
Hpy188III TCNNGA 6 cut(s) 104, 407, 2071, 2339, 2477, 2560
Hpy8I GTNNAC 8 cut(s) 662, 1427, 1576, 1588, 1809, 1833, 1999, 2304
Hpy99I CGWCG 4 cut(s) 408, 607, 1504, 1996
HpyAV CCTTC 8 cut(s) 104, 662, 770, 1036, 1250, 1440, 1449, 2265
HpyCH4III ACNGT 9 cut(s) 701, 1399, 1580, 1921, 1987, 2048, 2058, 2078, 2308
HpyCH4IV ACGT 5 cut(s) 1611, 1866, 1960, 1991, 2372
HpyF3I CTNAG 6 cut(s) 6, 285, 1221, 1390, 1421, 2112
HpySE526I ACGT 5 cut(s) 1611, 1866, 1960, 1991, 2372
Hsp92I GRCGYC 1 cut(s) 1280
HspAI GCGC 5 cut(s) 1280, 1553, 2229, 2470, 2472
KasI GGCGCC 1 cut(s) 1279
KflI GGGWCCC 1 cut(s) 414
Ksp22I TGATCA 2 cut(s) 1318, 2406
LguI GCTCTTC 1 cut(s) 1836
LmnI GCTCC 3 cut(s) 268, 2036, 2431
MabI ACCWGGT 1 cut(s) 148
MaeI CTAG 7 cut(s) 201, 950, 1647, 1881, 2270, 2388, 2486
MaeII ACGT 5 cut(s) 1611, 1866, 1960, 1991, 2372
MaeIII GTNAC 3 cut(s) 1143, 1987, 2211
MfeI CAATTG 1 cut(s) 19
MflI RGATCY 4 cut(s) 127, 589, 1595, 2251
MhlI GDGCHC 3 cut(s) 796, 1541, 1811
Mly113I GGCGCC 1 cut(s) 1280
MlyI GAGTC 7 cut(s) 241, 586, 715, 820, 1625, 1665, 2458
MmeI TCCRAC 3 cut(s) 21, 683, 1060
MroXI GAANNNNTTC 2 cut(s) 118, 2334
MseI TTAA 5 cut(s) 509, 845, 1055, 1401, 2208
MslI CAYNNNNRTG 4 cut(s) 1136, 1469, 1635, 1994
MspA1I CMGCKG 2 cut(s) 230, 2319
MspCI CTTAAG 1 cut(s) 2207
MspI CCGG 2 cut(s) 464, 1106
MspR9I CCNGG 6 cut(s) 150, 464, 642, 720, 1106, 1947
MunI CAATTG 1 cut(s) 19
Mva1269I GAATGC 3 cut(s) 217, 1216, 1846
MvaI CCWGG 4 cut(s) 150, 642, 720, 1947
MvnI CGCG 2 cut(s) 2131, 2472
NarI GGCGCC 1 cut(s) 1280
NciI CCSGG 2 cut(s) 464, 1106
NheI GCTAGC 1 cut(s) 949
NlaIV GGNNCC 8 cut(s) 129, 415, 416, 591, 1281, 1377, 2253, 2314
NmeAIII GCCGAG 1 cut(s) 2473
NmuCI GTSAC 1 cut(s) 1987
NspI RCATGY 4 cut(s) 86, 1135, 1297, 1888
OliI CACNNNNGTG 1 cut(s) 1994
PaeI GCATGC 1 cut(s) 1297
PagI TCATGA 1 cut(s) 2476
PaqCI CACCTGC 1 cut(s) 617
PauI GCGCGC 1 cut(s) 2470
PciSI GCTCTTC 1 cut(s) 1836
PctI GAATGC 3 cut(s) 217, 1216, 1846
PdmI GAANNNNTTC 2 cut(s) 118, 2334
PfeI GAWTC 5 cut(s) 443, 682, 874, 1333, 2266
PleI GAGTC 7 cut(s) 241, 585, 714, 820, 1624, 1664, 2458
PluTI GGCGCC 1 cut(s) 1283
PpsI GAGTC 7 cut(s) 241, 585, 714, 820, 1624, 1664, 2458
Ppu21I YACGTR 2 cut(s) 1961, 2373
PpuMI RGGWCCY 2 cut(s) 414, 1376
Psp1406I AACGTT 1 cut(s) 1611
Psp5II RGGWCCY 2 cut(s) 414, 1376
Psp6I CCWGG 4 cut(s) 148, 640, 718, 1945
PspFI CCCAGC 3 cut(s) 417, 2009, 2247
PspGI CCWGG 4 cut(s) 148, 640, 718, 1945
PspN4I GGNNCC 8 cut(s) 129, 415, 416, 591, 1281, 1377, 2253, 2314
PspPI GGNCC 3 cut(s) 414, 1376, 1412
PspPPI RGGWCCY 2 cut(s) 414, 1376
PstI CTGCAG 1 cut(s) 2158
PsuI RGATCY 4 cut(s) 127, 589, 1595, 2251
PteI GCGCGC 1 cut(s) 2470
PvuII CAGCTG 2 cut(s) 230, 2319
RsaI GTAC 6 cut(s) 497, 661, 1071, 1723, 1963, 2060
RsaNI GTAC 6 cut(s) 496, 660, 1070, 1722, 1962, 2059
RseI CAYNNNNRTG 4 cut(s) 1136, 1469, 1635, 1994
SapI GCTCTTC 1 cut(s) 1836
SaqAI TTAA 5 cut(s) 509, 845, 1055, 1401, 2208
Sau96I GGNCC 3 cut(s) 414, 1376, 1412
SchI GAGTC 7 cut(s) 241, 586, 715, 820, 1625, 1665, 2458
ScrFI CCNGG 6 cut(s) 150, 464, 642, 720, 1106, 1947
SduI GDGCHC 3 cut(s) 796, 1541, 1811
SexAI ACCWGGT 1 cut(s) 148
SfcI CTRYAG 2 cut(s) 132, 2154
SfoI GGCGCC 1 cut(s) 1281
SinI GGWCC 2 cut(s) 414, 1376
SmiMI CAYNNNNRTG 4 cut(s) 1136, 1469, 1635, 1994
SmlI CTYRAG 2 cut(s) 249, 2207
SmoI CTYRAG 2 cut(s) 249, 2207
SnaBI TACGTA 1 cut(s) 1961
SphI GCATGC 1 cut(s) 1297
SsiI CCGC 4 cut(s) 380, 1202, 2129, 2501
SspDI GGCGCC 1 cut(s) 1279
SspMI CTAG 7 cut(s) 201, 950, 1647, 1881, 2270, 2388, 2486
StyD4I CCNGG 6 cut(s) 148, 462, 640, 718, 1104, 1945
TaaI ACNGT 9 cut(s) 701, 1399, 1580, 1921, 1987, 2048, 2058, 2078, 2308
TaiI ACGT 5 cut(s) 1614, 1869, 1963, 1994, 2375
TaqI TCGA 7 cut(s) 406, 605, 865, 1024, 1065, 1502, 2187
TaqII GACCGA 1 cut(s) 1803
TatI WGTACW 1 cut(s) 1721
TauI GCSGC 1 cut(s) 382
TfiI GAWTC 5 cut(s) 443, 682, 874, 1333, 2266
Tru1I TTAA 5 cut(s) 509, 845, 1055, 1401, 2208
Tru9I TTAA 5 cut(s) 509, 845, 1055, 1401, 2208
TscAI CASTG 9 cut(s) 439, 789, 1095, 1368, 1780, 1816, 1990, 2053, 2283
TseFI GTSAC 1 cut(s) 1987
Tsp45I GTSAC 1 cut(s) 1987
TspGWI ACGGA 4 cut(s) 140, 813, 1015, 1712
TspRI CASTG 9 cut(s) 439, 789, 1095, 1368, 1780, 1816, 1990, 2053, 2283
Vha464I CTTAAG 1 cut(s) 2207
VneI GTGCAC 1 cut(s) 1807
VpaK11BI GGWCC 2 cut(s) 414, 1376
XapI RAATTY 9 cut(s) 475, 889, 961, 1027, 1225, 2196, 2330, 2363, 2425
XceI RCATGY 4 cut(s) 86, 1135, 1297, 1888
XcmI CCANNNNNNNNNTGG 1 cut(s) 425
XmiI GTMKAC 2 cut(s) 1575, 1832
XmnI GAANNNNTTC 2 cut(s) 118, 2334
XspI CTAG 7 cut(s) 201, 950, 1647, 1881, 2270, 2388, 2486
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.