Prupe.7G235500_v2.0.a1

Transcriptional corepressor LEUNIG-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000670
Physical Location & Seq
Reverse (-)
20466408 .. 20474650
8243 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G235500.3

Sequence Viewer

Length: 2634 bp
ATGTCTCAGAGTCAGACCAATTGGGAAGCTGATAAAATGTTGGATGTGTATATATATGATTACCTTATGAAGAGAAAATTACATGCTTCTGCAAAGGCATTTCAAGATGAAGGAAAAGTGTCTACAGATCCTGTAGCTATTGATGCACCTGGTGGCTTTCTTTTCGAATGGTGGTCTGTCTTTTGGGACATATTTATTGCTAGGACGAATGAGAAGCACTCAGAAGCAGCTGCATCTTACATTGAGACTCAAGTGATGAAGGCGAGGGAGCTGCAGCAGCAACATCAGCAGCAGAAGCCTCAGCCGCAACAGCAAATGCAAATGCAAATGCAGCAGCAGTTGTTACAGAGGCATCAACAGCAGCAACAGCAGCAACAGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCGTCGAGATGGGACCCAGCTTCTAAATGGCACTGCCAATGGGCTTGTTGGCAATGACCCTCTTTTGAGGCAGAACCCTGCAACTGCTAATTCAATGGCAACAAAAATGTATGAAGAGAGATTAAAGCTTCCAATACAGAGGGATGGTTTGGATGATGCAGCTATCAAGCAAAGATTAGGTGATAATGTGAGTCAGCTTCTGGATTCCAATCATGCCTCATTGTTGAAAGCCGCCACTACAGGTGGCCAGCCTCCTCGTCAAATGCTGCATGGTACACCTGGAGGTATGTTGGGGAATCTTCAACAAGCTCACAACCGGAGTCAGCAACTTCCTGGTTCGACACAGGACATAAAGACTGAGATGATGAACCCCAGAGCTGCTGCTCCAGAAGGATCATTGATTGGCGCTCATGGATCAAATCAAGGCAGTAACAATTTGACTCTGAAAGGATGGCCTTTAACGGGATTTGATCGGTTTCGATCTGGGATTCTTCAGCAGCAAACGTCTATGATGCAGTCCCCTCAACCCTTCAATCAACTTCAGCTACAGCAGCAACTTATGCTTGCACAACAAAATCTGGCTTCCCCATCTGCCAATGACTTGGACAGTAGAAGGCTGAGAATGCTTCTCAACAATCAAAATACGGGTCTCGGGAAGGATGGTCAACTAAATTCTGTTGACGTATCTAACGTTGGATCACCAGTACAAGTTGGTTGCCCGGTATTACCTCGTGCGGATGCCGATATGATTATGAAGTTACAGCAACAGCAGATGCAAAGCAACAATCAACAGCAGCAACAGTATTCGCAGCATCCGCTTTCAAGTCAACAATCTCAGAGTTCAAGCCAACACCTACAGCAGCAAGAAAAAATTATTGGTTCTGGTGGCATTGTGGCAGATGGCAGCATGGCTAACACCTTACAAGGGAATGATCAGGCTTCAAAGAATCAAATTGGGCGAAAGAGAAAGCAGCCAGTGTCATCTTCAGGTCCTGCCAATAGCTCAGGGACTGTTAATACCACAGGACCATCTCCCAGTTCACCTTCAACGCCTTCTACCCACACACCAGGAGATGTAATGTCTATGCCAACTTTATCCCATAATGGTGGTTCCTCAAAGTCTCTACTTATGTTTGGCTCTGATGGTTTGGGCTCACTTGCATCAGCGCAAAATAAATTGACTGATGTGGACCGTTTTGTGGATGATGGATCTTTAGAGGATAATGTTGAATCGTTCTTATCACATGATGATGCTGACCCTAGAGGTAGAGTTGCTCGCTGTTCAGATGTCAGCAAAGGTTTCACTTTTACGGAAGTCCATCTTATTCCTGCAAGTACAAGTAAAGTTGAATGCTGTCACTTCTCTTCAGATGGAAAATCACTTGCCACTGGTGGGCATGACCGAAAGGCTGTATTGTGGTGTACTGAGTCCTATACTGTAAAGTCTACACTTGAAGAGCATTCTCAATGGATAACCGATGTTCGTTTTAGTCCTAGCATGTCAAGGCTTGCTACATCTTCTGCTGACAAAACTGTCAGGGTTTGGGATGCTGATAATCCTGGATATTCACTCCGTACTTTTGTGGGGCATTCTACAACTGTTATGTCAGTGGACTTCCACCCTAGTAAAGAGGACCTTCTCTGCTCTTGTGATAACAACAGTGAGATACGATACTGGAGTATCAAGAATGGTAGTTGTGCTGGAGTTTTCAAGGGTGGTGCAACTCAGATGAGGTTTCAACCCAAAGCTGGAAGAAACCTTGCAGCTGCAGCTGATAATTTTGTATCCATCCTTGATGTCGAGACGCAAGCTTGCGTGCGTAAATTACAGGGCCATAAGAACCTTGTCCATTCTGTGTGCTGGGATCCTTCTGGTGACTTTCTAGCATCAGTGAGTGATGACTTGGTTAGAGTGTGGTCAGTTGTCTCCAGCGCCAGAGGGGAATGCATTCATGAGTTGAGCTGTTCTGGCAACAAATTTAATACATGTGTTTTCCATCCAACTTGTCCTTCATTGTTGGTCATTGGCTGCTATGAGACTTTGGAGCTTTGGAACATGACCGAGAACAAGACAATGACTCTGCATGCTCATGACAAGCTAGTATCTTCTTTGGCGGTATCAGATGCTACCGGGTTGGTTGCTTCCGCTAGCCACGACAAGTTCGTCAAGCTCTGGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0001558 GO:0001666 GO:0003002 GO:0003006 GO:0005975 GO:0005976 GO:0006355 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009798 GO:0009845 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009943 GO:0009944 GO:0009955 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010073 GO:0010154 GO:0010191 GO:0010214 GO:0010243 GO:0010272 GO:0010393 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0022414 GO:0022603 GO:0022604 GO:0030307 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032504 GO:0033554 GO:0036293 GO:0040008 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0044237 GO:0044238 GO:0045892 GO:0045927 GO:0045934 GO:0045995 GO:0046677 GO:0046898 GO:0048316 GO:0048359 GO:0048507 GO:0048509 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048608 GO:0048609 GO:0048638 GO:0048639 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051510 GO:0051512 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060992 GO:0061458 GO:0065001 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0071704 GO:0080001 GO:0080090 GO:0090351 GO:0097305 GO:1901654 GO:1901698 GO:1901700 GO:1902074 GO:1902183 GO:1902679 GO:1903506 GO:1903507 GO:2000024 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LisH WD40

Protein Analysis

878

Amino Acids

96.54

Weight (kDa)

6.7

Isoelectric Point (pI)

53.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000670)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G32551 AT4G32551
fragaria_vesca FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940
malus_domestica MD02G1040200.v1.1 MD08G1139100.v1.1 MD15G1117100.v1.1 MD15G1145100.v1.1
prunus_persica Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.7G235500_v2.0.a1 Prupe.7G235500_v2.0.a1 Prupe.7G235500_v2.0.a1 Prupe.7G235500_v2.0.a1
pyrus_communis pycom02g03350 pycom08g11750 pycom15g10550 pycom15g16250
rosa_chinensis RchiOBHm_Chr2g0089671 RchiOBHm_Chr3g0465211 RchiOBHm_Chr6g0312941
rosa_laevigata RLG00000010283 RLG00000016050
rosa_multiflora Rmu_sc0000665.1_g000023 Rmu_sc0008049.1_g000043 Rmu_sc0008049.1_g000044
rosa_roxburghii Rroxscaffold_2G00151660 Rroxscaffold_7G00156310
rosa_rugosa Rorug02G0002500 Rorug02G0002500 Rorug06G0400700 Rorug06G0400700 Rorug06G0400700 Rorug06G0400700 Rorug06G0400800.1 Rorug06G0400900.1
rosa_samantha Rh2AG047900 Rh2BG046500 Rh2CG048500 Rh2DG047900 Rh6AG517700 Rh6BG529400 Rh6CG533900 Rh6DG520500
rosa_wichuraiana Rw2G004260 Rw5G017770 Rw6G045010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1985, 2615
AccI GTMKAC 2 cut(s) 122, 1898
AciI CCGC 6 cut(s) 305, 684, 1187, 1268, 2567, 2598
AclI AACGTT 1 cut(s) 1143
AclWI GGATC 7 cut(s) 122, 853, 874, 1156, 1669, 2312, 2325
AcoI YGGCCR 1 cut(s) 697
AcsI RAATTY 2 cut(s) 1123, 2429
AcuI CTGAAG 4 cut(s) 929, 977, 1422, 1803
AdeI CACNNNGTG 1 cut(s) 152
AfaI GTAC 5 cut(s) 727, 1158, 1789, 1876, 2029
AfiI CCNNNNNNNGG 5 cut(s) 914, 1377, 1651, 1845, 2201
AflIII ACRYGT 1 cut(s) 2438
AjnI CCWGG 5 cut(s) 148, 730, 784, 1519, 2011
AjuI GAANNNNNNNTTGG 4 cut(s) 1311, 1343, 2446, 2478
Alw26I GTCTC 7 cut(s) 9, 239, 1106, 1578, 2249, 2383, 2483
AlwI GGATC 7 cut(s) 122, 853, 874, 1156, 1669, 2312, 2325
AlwNI CAGNNNCTG 4 cut(s) 131, 652, 1445, 1463
Ama87I CYCGRG 1 cut(s) 1103
AoxI GGCC 3 cut(s) 697, 905, 2284
ApoI RAATTY 2 cut(s) 1123, 2429
ArsI GACNNNNNNTTYG 2 cut(s) 1084, 1116
Asp700I GAANNNNTTC 1 cut(s) 2400
AspLEI GCGC 3 cut(s) 860, 1621, 2387
AspS9I GGNCC 6 cut(s) 465, 1442, 1478, 1642, 2086, 2284
AsuC2I CCSGG 2 cut(s) 1172, 2584
AsuHPI GGTGA 4 cut(s) 644, 1143, 1485, 2339
AsuII TTCGAA 1 cut(s) 165
AsuNHI GCTAGC 1 cut(s) 2600
AvaI CYCGRG 1 cut(s) 1103
AvaII GGWCC 5 cut(s) 465, 1442, 1478, 1642, 2086
BaeI ACNNNNGTAYC 4 cut(s) 2116, 2116, 2149, 2149
BalI TGGCCA 1 cut(s) 699
BamHI GGATCC 1 cut(s) 2317
BanII GRGCYC 1 cut(s) 1607
BauI CACGAG 1 cut(s) 1182
BbvCI CCTCAGC 1 cut(s) 300
BcgI CGANNNNNNTGC 2 cut(s) 253, 287
BciT130I CCWGG 5 cut(s) 150, 732, 786, 1521, 2013
BciVI GTATCC 1 cut(s) 2248
BclI TGATCA 1 cut(s) 1384
BcnI CCSGG 2 cut(s) 1172, 2584
BcoDI GTCTC 7 cut(s) 9, 239, 1106, 1578, 2249, 2383, 2483
BfaI CTAG 7 cut(s) 201, 1713, 1947, 2076, 2336, 2552, 2601
BfmI CTRYAG 7 cut(s) 123, 132, 272, 690, 998, 1307, 2220
BfoI RGCGCY 2 cut(s) 861, 2388
BfuI GTATCC 1 cut(s) 2248
Bme1390I CCNGG 7 cut(s) 150, 732, 786, 1172, 1521, 2013, 2584
Bme18I GGWCC 5 cut(s) 465, 1442, 1478, 1642, 2086
BmeT110I CYCGRG 1 cut(s) 1103
BmgT120I GGNCC 6 cut(s) 465, 1442, 1478, 1642, 2086, 2284
BmiI GGNNCC 4 cut(s) 466, 467, 1564, 2319
BmrFI CCNGG 7 cut(s) 150, 732, 786, 1172, 1521, 2013, 2584
BmrI ACTGGG 1 cut(s) 1482
BmtI GCTAGC 1 cut(s) 2604
BmuI ACTGGG 1 cut(s) 1482
BplI GAGNNNNNCTC 2 cut(s) 203, 235
BpmI CTGGAG 5 cut(s) 753, 822, 2149, 2175, 2365
Bpu10I CCTNAGC 2 cut(s) 300, 1456
Bpu14I TTCGAA 1 cut(s) 165
BpuEI CTTGAG 1 cut(s) 234
BpuMI CCSGG 2 cut(s) 1172, 2584
BsaBI GATNNNNATC 1 cut(s) 660
BsaI GGTCTC 1 cut(s) 1106
BsaWI WCCGGW 1 cut(s) 768
Bsc4I CCNNNNNNNGG 5 cut(s) 914, 1377, 1651, 1845, 2201
Bse1I ACTGG 5 cut(s) 1154, 1427, 1488, 1846, 2132
Bse3DI GCAATG 1 cut(s) 511
Bse8I GATNNNNATC 1 cut(s) 660
BseBI CCWGG 5 cut(s) 150, 732, 786, 1521, 2013
BseJI GATNNNNATC 1 cut(s) 660
BseLI CCNNNNNNNGG 5 cut(s) 914, 1377, 1651, 1845, 2201
BseMI GCAATG 1 cut(s) 511
BseMII CTCAG 9 cut(s) 20, 234, 314, 801, 1061, 1301, 1470, 1869, 2192
BseNI ACTGG 5 cut(s) 1154, 1427, 1488, 1846, 2132
BseRI GAGGAG 1 cut(s) 696
BseYI CCCAGC 2 cut(s) 468, 2313
BshFI GGCC 3 cut(s) 699, 907, 2286
BsiHKCI CYCGRG 1 cut(s) 1103
BsiSI CCGG 3 cut(s) 769, 1172, 2583
BslFI GGGAC 4 cut(s) 200, 478, 955, 1474
BslI CCNNNNNNNGG 5 cut(s) 914, 1377, 1651, 1845, 2201
BsmAI GTCTC 7 cut(s) 9, 239, 1106, 1578, 2249, 2383, 2483
BsmBI CGTCTC 1 cut(s) 2249
BsmFI GGGAC 4 cut(s) 200, 478, 955, 1474
BsmI GAATGC 6 cut(s) 1080, 1808, 1912, 2041, 2400, 2402
BsnI GGCC 3 cut(s) 699, 907, 2286
Bso31I GGTCTC 1 cut(s) 1106
BsoBI CYCGRG 1 cut(s) 1103
Bsp119I TTCGAA 1 cut(s) 165
Bsp1286I GDGCHC 1 cut(s) 1607
Bsp143I GATC 9 cut(s) 127, 845, 866, 922, 932, 1148, 1384, 1661, 2317
BspACI CCGC 6 cut(s) 305, 684, 1187, 1268, 2567, 2598
BspANI GGCC 3 cut(s) 699, 907, 2286
BspCNI CTCAG 9 cut(s) 19, 233, 313, 802, 1062, 1300, 1469, 1870, 2191
BspHI TCATGA 2 cut(s) 2404, 2542
BspLI GGNNCC 4 cut(s) 466, 467, 1564, 2319
BspMAI CTGCAG 2 cut(s) 276, 2224
BspOI GCTAGC 1 cut(s) 2604
BspPI GGATC 7 cut(s) 122, 853, 874, 1156, 1669, 2312, 2325
BspQI GCTCTTC 1 cut(s) 1902
BspT104I TTCGAA 1 cut(s) 165
BspTNI GGTCTC 1 cut(s) 1106
BsrDI GCAATG 1 cut(s) 511
BsrI ACTGG 5 cut(s) 1154, 1427, 1488, 1846, 2132
BssMI GATC 9 cut(s) 127, 845, 866, 922, 932, 1148, 1384, 1661, 2317
BssSI CACGAG 1 cut(s) 1182
Bst2BI CACGAG 1 cut(s) 1182
Bst2UI CCWGG 5 cut(s) 150, 732, 786, 1521, 2013
Bst4CI ACNGT 8 cut(s) 1061, 1254, 1465, 1646, 1891, 1987, 2053, 2114
Bst6I CTCTTC 4 cut(s) 65, 561, 1822, 1902
BstAPI GCANNNNNTGC 1 cut(s) 1012
BstBI TTCGAA 1 cut(s) 165
BstC8I GCNNGC 9 cut(s) 701, 1017, 1729, 1962, 2262, 2266, 2270, 2538, 2602
BstDEI CTNAG 9 cut(s) 6, 220, 300, 810, 1070, 1287, 1456, 1878, 2178
BstH2I RGCGCY 2 cut(s) 861, 2388
BstHHI GCGC 3 cut(s) 860, 1621, 2387
BstKTI GATC 9 cut(s) 130, 848, 869, 925, 935, 1151, 1387, 1664, 2320
BstMAI GTCTC 7 cut(s) 9, 239, 1106, 1578, 2249, 2383, 2483
BstMBI GATC 9 cut(s) 127, 845, 866, 922, 932, 1148, 1384, 1661, 2317
BstNI CCWGG 5 cut(s) 150, 732, 786, 1521, 2013
BstNSI RCATGY 4 cut(s) 86, 1954, 2442, 2540
BstSCI CCNGG 7 cut(s) 148, 730, 784, 1170, 1519, 2011, 2582
BstSFI CTRYAG 7 cut(s) 123, 132, 272, 690, 998, 1307, 2220
BstX2I RGATCY 3 cut(s) 127, 1661, 2317
BstXI CCANNNNNNTGG 2 cut(s) 1054, 1559
BstYI RGATCY 3 cut(s) 127, 1661, 2317
BsuI GTATCC 1 cut(s) 2248
BsuRI GGCC 3 cut(s) 699, 907, 2286
BtsI GCAGTG 1 cut(s) 483
BtsIMutI CAGTG 6 cut(s) 483, 1434, 1839, 2067, 2119, 2349
Cac8I GCNNGC 9 cut(s) 701, 1017, 1729, 1962, 2262, 2266, 2270, 2538, 2602
CaiI CAGNNNCTG 4 cut(s) 131, 652, 1445, 1463
CciI TCATGA 2 cut(s) 2404, 2542
CfoI GCGC 3 cut(s) 860, 1621, 2387
Cfr13I GGNCC 6 cut(s) 465, 1442, 1478, 1642, 2086, 2284
CseI GACGC 2 cut(s) 443, 2266
CsiI ACCWGGT 1 cut(s) 148
Csp6I GTAC 5 cut(s) 726, 1157, 1788, 1875, 2028
CviQI GTAC 5 cut(s) 726, 1157, 1788, 1875, 2028
DdeI CTNAG 9 cut(s) 6, 220, 300, 810, 1070, 1287, 1456, 1878, 2178
DpnI GATC 9 cut(s) 129, 847, 868, 924, 934, 1150, 1386, 1663, 2319
DpnII GATC 9 cut(s) 127, 845, 866, 922, 932, 1148, 1384, 1661, 2317
DraIII CACNNNGTG 1 cut(s) 152
DrdI GACNNNNNNGTC 2 cut(s) 1985, 2615
DseDI GACNNNNNNGTC 2 cut(s) 1985, 2615
EaeI YGGCCR 1 cut(s) 697
Eam1104I CTCTTC 4 cut(s) 65, 561, 1822, 1902
EarI CTCTTC 4 cut(s) 65, 561, 1822, 1902
Eco24I GRGCYC 1 cut(s) 1607
Eco31I GGTCTC 1 cut(s) 1106
Eco47I GGWCC 5 cut(s) 465, 1442, 1478, 1642, 2086
Eco57I CTGAAG 4 cut(s) 929, 977, 1422, 1803
Eco88I CYCGRG 1 cut(s) 1103
EcoO109I RGGNCCY 3 cut(s) 465, 1442, 2086
EcoRII CCWGG 5 cut(s) 148, 730, 784, 1519, 2011
EcoT22I ATGCAT 1 cut(s) 2402
EcoT38I GRGCYC 1 cut(s) 1607
Esp3I CGTCTC 1 cut(s) 2249
FalI AAGNNNNNCTT 4 cut(s) 1758, 1790, 2073, 2105
FaqI GGGAC 4 cut(s) 200, 478, 955, 1474
FbaI TGATCA 1 cut(s) 1384
FblI GTMKAC 2 cut(s) 122, 1898
FriOI GRGCYC 1 cut(s) 1607
FspBI CTAG 7 cut(s) 201, 1713, 1947, 2076, 2336, 2552, 2601
GlaI GCGC 3 cut(s) 859, 1620, 2386
GsaI CCCAGC 2 cut(s) 472, 2317
GsuI CTGGAG 5 cut(s) 753, 822, 2149, 2175, 2365
HaeII RGCGCY 2 cut(s) 861, 2388
HaeIII GGCC 3 cut(s) 699, 907, 2286
HapII CCGG 3 cut(s) 769, 1172, 2583
HgaI GACGC 2 cut(s) 443, 2266
HhaI GCGC 3 cut(s) 860, 1621, 2387
Hin6I GCGC 3 cut(s) 858, 1619, 2385
HinP1I GCGC 3 cut(s) 858, 1619, 2385
HincII GTYRAC 3 cut(s) 1118, 1132, 1280
HindII GTYRAC 3 cut(s) 1118, 1132, 1280
HindIII AAGCTT 2 cut(s) 578, 2262
HpaII CCGG 3 cut(s) 769, 1172, 2583
HphI GGTGA 4 cut(s) 644, 1143, 1485, 2339
Hpy99I CGWCG 1 cut(s) 459
HpyCH4III ACNGT 8 cut(s) 1061, 1254, 1465, 1646, 1891, 1987, 2053, 2114
HpyCH4IV ACGT 3 cut(s) 956, 1134, 1143
HpyF3I CTNAG 9 cut(s) 6, 220, 300, 810, 1070, 1287, 1456, 1878, 2178
HpySE526I ACGT 3 cut(s) 956, 1134, 1143
HspAI GCGC 3 cut(s) 858, 1619, 2385
KflI GGGWCCC 1 cut(s) 465
Ksp22I TGATCA 1 cut(s) 1384
Kzo9I GATC 9 cut(s) 127, 845, 866, 922, 932, 1148, 1384, 1661, 2317
LguI GCTCTTC 1 cut(s) 1902
LmnI GCTCC 3 cut(s) 268, 841, 2497
MabI ACCWGGT 1 cut(s) 148
MaeI CTAG 7 cut(s) 201, 1713, 1947, 2076, 2336, 2552, 2601
MaeII ACGT 3 cut(s) 956, 1134, 1143
MaeIII GTNAC 5 cut(s) 342, 881, 1209, 1808, 2327
MalI GATC 9 cut(s) 129, 847, 868, 924, 934, 1150, 1386, 1663, 2319
MboI GATC 9 cut(s) 127, 845, 866, 922, 932, 1148, 1384, 1661, 2317
MfeI CAATTG 1 cut(s) 19
MflI RGATCY 3 cut(s) 127, 1661, 2317
MhlI GDGCHC 1 cut(s) 1607
MlsI TGGCCA 1 cut(s) 699
MluNI TGGCCA 1 cut(s) 699
MlyI GAGTC 7 cut(s) 19, 241, 652, 781, 886, 1889, 2524
MmeI TCCRAC 3 cut(s) 21, 1126, 2477
Mox20I TGGCCA 1 cut(s) 699
Mph1103I ATGCAT 1 cut(s) 2402
MroXI GAANNNNTTC 1 cut(s) 2400
MscI TGGCCA 1 cut(s) 699
MseI TTAA 4 cut(s) 575, 911, 1467, 2433
MslI CAYNNNNRTG 3 cut(s) 1557, 1701, 2541
Msp20I TGGCCA 1 cut(s) 699
MspA1I CMGCKG 3 cut(s) 230, 2219, 2225
MspI CCGG 3 cut(s) 769, 1172, 2583
MspR9I CCNGG 7 cut(s) 150, 732, 786, 1172, 1521, 2013, 2584
MunI CAATTG 1 cut(s) 19
Mva1269I GAATGC 6 cut(s) 1080, 1808, 1912, 2041, 2400, 2402
MvaI CCWGG 5 cut(s) 150, 732, 786, 1521, 2013
NciI CCSGG 2 cut(s) 1172, 2584
NdeII GATC 9 cut(s) 127, 845, 866, 922, 932, 1148, 1384, 1661, 2317
NheI GCTAGC 1 cut(s) 2600
NlaIV GGNNCC 4 cut(s) 466, 467, 1564, 2319
NmuCI GTSAC 2 cut(s) 1808, 2327
NsiI ATGCAT 1 cut(s) 2402
NspI RCATGY 4 cut(s) 86, 1954, 2442, 2540
NspV TTCGAA 1 cut(s) 165
PaeI GCATGC 1 cut(s) 2540
PagI TCATGA 2 cut(s) 2404, 2542
PciI ACATGT 1 cut(s) 2438
PciSI GCTCTTC 1 cut(s) 1902
PcsI WCGNNNNNNNCGW 2 cut(s) 1140, 2613
PctI GAATGC 6 cut(s) 1080, 1808, 1912, 2041, 2400, 2402
PdmI GAANNNNTTC 1 cut(s) 2400
PfeI GAWTC 5 cut(s) 656, 748, 940, 1399, 1682
PfoI TCCNGGA 1 cut(s) 2011
PleI GAGTC 7 cut(s) 18, 241, 651, 780, 886, 1888, 2524
PpsI GAGTC 7 cut(s) 18, 241, 651, 780, 886, 1888, 2524
PpuMI RGGWCCY 3 cut(s) 465, 1442, 2086
PscI ACATGT 1 cut(s) 2438
Psp1406I AACGTT 1 cut(s) 1143
Psp5II RGGWCCY 3 cut(s) 465, 1442, 2086
Psp6I CCWGG 5 cut(s) 148, 730, 784, 1519, 2011
PspFI CCCAGC 2 cut(s) 468, 2313
PspGI CCWGG 5 cut(s) 148, 730, 784, 1519, 2011
PspN4I GGNNCC 4 cut(s) 466, 467, 1564, 2319
PspPI GGNCC 6 cut(s) 465, 1442, 1478, 1642, 2086, 2284
PspPPI RGGWCCY 3 cut(s) 465, 1442, 2086
PstI CTGCAG 2 cut(s) 276, 2224
PstNI CAGNNNCTG 4 cut(s) 131, 652, 1445, 1463
PsuI RGATCY 3 cut(s) 127, 1661, 2317
PvuII CAGCTG 3 cut(s) 230, 2219, 2225
RsaI GTAC 5 cut(s) 727, 1158, 1789, 1876, 2029
RsaNI GTAC 5 cut(s) 726, 1157, 1788, 1875, 2028
RseI CAYNNNNRTG 3 cut(s) 1557, 1701, 2541
SapI GCTCTTC 1 cut(s) 1902
SaqAI TTAA 4 cut(s) 575, 911, 1467, 2433
Sau3AI GATC 9 cut(s) 127, 845, 866, 922, 932, 1148, 1384, 1661, 2317
Sau96I GGNCC 6 cut(s) 465, 1442, 1478, 1642, 2086, 2284
SchI GAGTC 7 cut(s) 19, 241, 652, 781, 886, 1889, 2524
ScrFI CCNGG 7 cut(s) 150, 732, 786, 1172, 1521, 2013, 2584
SduI GDGCHC 1 cut(s) 1607
SexAI ACCWGGT 1 cut(s) 148
SfcI CTRYAG 7 cut(s) 123, 132, 272, 690, 998, 1307, 2220
SfuI TTCGAA 1 cut(s) 165
SinI GGWCC 5 cut(s) 465, 1442, 1478, 1642, 2086
SmiMI CAYNNNNRTG 3 cut(s) 1557, 1701, 2541
SmlI CTYRAG 1 cut(s) 249
SmoI CTYRAG 1 cut(s) 249
SphI GCATGC 1 cut(s) 2540
SsiI CCGC 6 cut(s) 305, 684, 1187, 1268, 2567, 2598
SspMI CTAG 7 cut(s) 201, 1713, 1947, 2076, 2336, 2552, 2601
StyD4I CCNGG 7 cut(s) 148, 730, 784, 1170, 1519, 2011, 2582
TaaI ACNGT 8 cut(s) 1061, 1254, 1465, 1646, 1891, 1987, 2053, 2114
TaiI ACGT 3 cut(s) 959, 1137, 1146
TaqI TCGA 5 cut(s) 165, 457, 791, 931, 2253
TaqII GACCGA 2 cut(s) 1869, 2528
TatI WGTACW 3 cut(s) 1156, 1787, 1874
TauI GCSGC 2 cut(s) 307, 686
TfiI GAWTC 5 cut(s) 656, 748, 940, 1399, 1682
Tru1I TTAA 4 cut(s) 575, 911, 1467, 2433
Tru9I TTAA 4 cut(s) 575, 911, 1467, 2433
TscAI CASTG 6 cut(s) 490, 1434, 1846, 2067, 2119, 2349
TseFI GTSAC 2 cut(s) 1808, 2327
Tsp45I GTSAC 2 cut(s) 1808, 2327
TspDTI ATGAA 8 cut(s) 83, 123, 272, 579, 833, 1220, 2393, 2454
TspGWI ACGGA 2 cut(s) 1778, 2015
TspRI CASTG 6 cut(s) 490, 1434, 1846, 2067, 2119, 2349
VpaK11BI GGWCC 5 cut(s) 465, 1442, 1478, 1642, 2086
XapI RAATTY 2 cut(s) 1123, 2429
XceI RCATGY 4 cut(s) 86, 1954, 2442, 2540
XcmI CCANNNNNNNNNTGG 1 cut(s) 476
XmiI GTMKAC 2 cut(s) 122, 1898
XmnI GAANNNNTTC 1 cut(s) 2400
XspI CTAG 7 cut(s) 201, 1713, 1947, 2076, 2336, 2552, 2601
Zsp2I ATGCAT 1 cut(s) 2402
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.