Rmu_sc0000665.1_g000023

Transcriptional corepressor LEUNIG-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000665.1
OG0000670
Physical Location & Seq
Reverse (-)
97064 .. 103742
6679 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000665.1_g000023.1.cds

Sequence Viewer

Length: 2574 bp
atggctcaggccaattgggaagctgataaaatgttggatgtgtatatatatgattaccttctgaagagaaatttacatgcttctgcaaaggcatttcaagctgaaggaaaagtttctacagatcctgtagctattgatgcacccggtggctttcttttcgaatggtggtctgtcttctgggacatattcatcgctaggactaatgaaaagcactctgaagcagctgcatcttatattgagactcaagtgaacaaggctcgggagctgcaacagaagcctcagcagcatcctcaaatgcaaatgcagcatcttttgcaaaggcatgctgctcagcagcatcaacaacagcaacaacaacaacaacaacaacaacaacaccagcaacaacaacacccgcaacaacacccgcaacaccagcagcagcagcagcagcagcaaagacgagatgggacccaacttcttaatggaacttccaatgggcttgttggcactgatcctctttcgaggcagaactctgcaaccgcaaatgtcatggcaacaaaaatgtacgaggacagattaaagcctcccatacagagggatgctttggatgatgcggctatgaagcaaaggttaggtgacaatatgaatcagcttatggattcaaatcgtgcatcattggtgaaagtagccacagcaggtggccagtctcccggtcaaatgctgcatggtacacctggaggtatgttggggaatcttcaacaagctcacaatcggagtcagcaacttcctggattgatgcaggacataaagagtgagataatgaaccccagagctgctggtccagaaggatcattgattggtcttcatggatcaaatgaaggcagtagcaatttgactctgaaggggtggcctttaacggttcgacctggaattcttcagcagcaaaattccatgatgcagtcctctcagccctttaatcagcttcagctccagcagcaacttctacttcaaaatttagcttccccatctaccaatgacttggaaactagaaggctatcgatgctcctcaatagaaatatacctaacgttgatgtacctaacgttggatcgcctgttcaagtgggttgccctgtaatgcctggtgcagatgcagatatgattatgaagcaacagcagctgcaaagcaacaatcaacaccaacaacagcaacagtattcacagcatccattttcgagtcaacaccctcagagttcgaatcaacacatccagcagcaagaaaagatcactggtgctggcagctttacagctggtggtagcatgtctaactcctttcaaggcaatgatcaggctccaaagaatcaaatggggcggaagaggaagcagccagtgtcatcttcaggtcctgccaatagttcagggactgctaataccactggaccatcccccagttcaccttcaacgccttctactcacacggcaggagatgcgaactctgtgccaactttggcccataatagcggttcctcgaagtctctgcttatgtttgcttctgatggtctaggctcagttgcctcggtgccaaataaattgaatgatatggaccgatttgtggatgatggatctttagaggataatgttgaatcattcttatcacatgatgatgctgaccctagggatagagttgctcggtgttcagatgtcagcaaaggcttcactttttcggaagttggggctattactgcaagttcaagtaaagtcgagtgctgtcacttctcagcagatgggaaaacacttgccactggagggcatgatcgaaaggctgtgttgtggtctacagagtccttcactgtaaagtctacgcttgaagagcattctcagtggataacggatgttcgattcagtcctagtatgtcaaggctagctacatcttccgctgacaaaactgtcagggtctgggatgttgataatcctggctattcacttcgtacttttatgggacattctacaactgttatgtcacttgacttccaccctactaaagaggatcttctgtgctcttgtgataacaacagtgagataagatactggagtatcaagaatggtagttgtattggagtttccaagggtggtgcaactcagatgaggtttcaacctcgtcttggaaggatgcttgctgctgcaggtgatactcttgtatccataattgatgtagagaccgaatgttgcacgcttaaattacagggtcataagaaacttgtcaattctgtttgctgggattcttctggtgagtatctagcctctgtgagtgatgactcagttagagtatgggcagttggctccagtagcaaaggcgaatgcctttacgagttaccctgttctggcaacaaatttcagacatgcgtcttccatcctacttatccatcattgttggtaatcggctgttatgagacattggaactttggaacatgagcgagaacaagacaatgaccttgcatgcacatgacaacctagtatcttctttggcagcgtcaagttccactggcatggtagcttcagctagccatgataagttcgtgaagctatggaagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0001558 GO:0001666 GO:0003002 GO:0003006 GO:0005975 GO:0005976 GO:0006355 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009798 GO:0009845 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009943 GO:0009944 GO:0009955 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010073 GO:0010154 GO:0010191 GO:0010214 GO:0010243 GO:0010272 GO:0010393 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0022414 GO:0022603 GO:0022604 GO:0030307 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032504 GO:0033554 GO:0036293 GO:0040008 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0044237 GO:0044238 GO:0045892 GO:0045927 GO:0045934 GO:0045995 GO:0046677 GO:0046898 GO:0048316 GO:0048359 GO:0048507 GO:0048509 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048608 GO:0048609 GO:0048638 GO:0048639 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051510 GO:0051512 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060992 GO:0061458 GO:0065001 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0071704 GO:0080001 GO:0080090 GO:0090351 GO:0097305 GO:1901654 GO:1901698 GO:1901700 GO:1902074 GO:1902183 GO:1902679 GO:1903506 GO:1903507 GO:2000024 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LisH WD40

Protein Analysis

857

Amino Acids

94.0

Weight (kDa)

6.51

Isoelectric Point (pI)

51.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000670)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G32551 AT4G32551
fragaria_vesca FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_1g04170 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940 FvH4_2g29940
malus_domestica MD02G1040200.v1.1 MD08G1139100.v1.1 MD15G1117100.v1.1 MD15G1145100.v1.1
prunus_persica Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.1G468400_v2.0.a1 Prupe.7G235500_v2.0.a1 Prupe.7G235500_v2.0.a1 Prupe.7G235500_v2.0.a1 Prupe.7G235500_v2.0.a1
pyrus_communis pycom02g03350 pycom08g11750 pycom15g10550 pycom15g16250
rosa_chinensis RchiOBHm_Chr2g0089671 RchiOBHm_Chr3g0465211 RchiOBHm_Chr6g0312941
rosa_laevigata RLG00000010283 RLG00000016050
rosa_multiflora Rmu_sc0000665.1_g000023 Rmu_sc0008049.1_g000043 Rmu_sc0008049.1_g000044
rosa_roxburghii Rroxscaffold_2G00151660 Rroxscaffold_7G00156310
rosa_rugosa Rorug02G0002500 Rorug02G0002500 Rorug06G0400700 Rorug06G0400700 Rorug06G0400700 Rorug06G0400700 Rorug06G0400800.1 Rorug06G0400900.1
rosa_samantha Rh2AG047900 Rh2BG046500 Rh2CG048500 Rh2DG047900 Rh6AG517700 Rh6BG529400 Rh6CG533900 Rh6DG520500
rosa_wichuraiana Rw2G004260 Rw5G017770 Rw6G045010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 668, 2153
AasI GACNNNNNNGTC 1 cut(s) 1925
Acc36I ACCTGC 2 cut(s) 668, 2153
AccB1I GGYRCC 1 cut(s) 1558
AccI GTMKAC 2 cut(s) 1814, 1838
AciI CCGC 7 cut(s) 395, 407, 522, 596, 1351, 1500, 1914
AclI AACGTT 2 cut(s) 1068, 1083
AclWI GGATC 7 cut(s) 116, 488, 838, 859, 1096, 1609, 2034
AcoI YGGCCR 1 cut(s) 682
AcsI RAATTY 5 cut(s) 70, 912, 928, 994, 2369
AcuI CTGAAG 8 cut(s) 83, 123, 237, 902, 902, 950, 1362, 2520
AdeI CACNNNGTG 1 cut(s) 146
AfaI GTAC 4 cut(s) 548, 712, 1077, 1969
AfiI CCNNNNNNNGG 6 cut(s) 576, 1085, 1591, 1785, 2141, 2360
AjnI CCWGG 5 cut(s) 715, 769, 907, 1120, 1951
AloI GAACNNNNNNTCC 2 cut(s) 1080, 1112
Alw21I GWGCWC 1 cut(s) 2039
Alw26I GTCTC 5 cut(s) 233, 693, 1518, 2189, 2423
AlwI GGATC 7 cut(s) 116, 488, 838, 859, 1096, 1609, 2034
AlwNI CAGNNNCTG 5 cut(s) 125, 1159, 1385, 1403, 1935
Ama87I CYCGRG 1 cut(s) 258
AoxI GGCC 4 cut(s) 9, 682, 890, 1488
ApoI RAATTY 5 cut(s) 70, 912, 928, 994, 2369
Asp700I GAANNNNTTC 1 cut(s) 112
AspA2I CCTAGG 1 cut(s) 1652
AspS9I GGNCC 6 cut(s) 450, 821, 1382, 1418, 1489, 1582
AsuC2I CCSGG 2 cut(s) 144, 693
AsuHPI GGTGA 5 cut(s) 629, 673, 1425, 2177, 2279
AsuII TTCGAA 2 cut(s) 159, 1235
AsuNHI GCTAGC 2 cut(s) 1900, 2540
AvaI CYCGRG 1 cut(s) 258
AvaII GGWCC 5 cut(s) 450, 821, 1382, 1418, 1582
AvrII CCTAGG 1 cut(s) 1652
BaeI ACNNNNGTAYC 8 cut(s) 2056, 2056, 2089, 2089, 2160, 2160, 2193, 2193
BalI TGGCCA 1 cut(s) 684
BanI GGYRCC 1 cut(s) 1558
BbsI GAAGAC 3 cut(s) 166, 836, 2377
Bbv12I GWGCWC 1 cut(s) 2039
BbvCI CCTCAGC 1 cut(s) 279
BccI CCATC 8 cut(s) 440, 1015, 1429, 1529, 1592, 1757, 2397, 2410
BceAI ACGGC 1 cut(s) 1473
BcgI CGANNNNNNTGC 4 cut(s) 1459, 1493, 1498, 1532
BciT130I CCWGG 5 cut(s) 717, 771, 909, 1122, 1953
BciVI GTATCC 1 cut(s) 2188
BclI TGATCA 1 cut(s) 1324
BcnI CCSGG 2 cut(s) 144, 693
BcoDI GTCTC 5 cut(s) 233, 693, 1518, 2189, 2423
BfaI CTAG 9 cut(s) 195, 1029, 1541, 1653, 1887, 1901, 2276, 2492, 2541
BfmI CTRYAG 4 cut(s) 117, 126, 1815, 2160
BfuAI ACCTGC 2 cut(s) 668, 2153
BfuI GTATCC 1 cut(s) 2188
BlnI CCTAGG 1 cut(s) 1652
BlpI GCTNAGC 1 cut(s) 330
Bme1390I CCNGG 7 cut(s) 144, 693, 717, 771, 909, 1122, 1953
Bme18I GGWCC 5 cut(s) 450, 821, 1382, 1418, 1582
BmeT110I CYCGRG 1 cut(s) 258
BmgT120I GGNCC 6 cut(s) 450, 821, 1382, 1418, 1489, 1582
BmiI GGNNCC 6 cut(s) 451, 452, 1332, 1504, 1560, 2320
BmrFI CCNGG 7 cut(s) 144, 693, 717, 771, 909, 1122, 1953
BmrI ACTGGG 1 cut(s) 1422
BmtI GCTAGC 2 cut(s) 1904, 2544
BmuI ACTGGG 1 cut(s) 1422
BoxI GACNNNNGTC 1 cut(s) 2381
BpiI GAAGAC 3 cut(s) 166, 836, 2377
BpmI CTGGAG 5 cut(s) 738, 956, 1803, 2089, 2305
Bpu10I CCTNAGC 2 cut(s) 6, 279
Bpu1102I GCTNAGC 1 cut(s) 330
Bpu14I TTCGAA 2 cut(s) 159, 1235
BpuEI CTTGAG 1 cut(s) 228
BpuMI CCSGG 2 cut(s) 144, 693
Bsa29I ATCGAT 1 cut(s) 1040
BsaBI GATNNNNATC 1 cut(s) 645
BsaI GGTCTC 1 cut(s) 2189
BsaJI CCNNGG 3 cut(s) 1554, 1652, 2103
Bsc4I CCNNNNNNNGG 6 cut(s) 576, 1085, 1591, 1785, 2141, 2360
Bse1I ACTGG 9 cut(s) 685, 1273, 1367, 1420, 1428, 1786, 2072, 2322, 2527
Bse3DI GCAATG 1 cut(s) 1327
Bse8I GATNNNNATC 1 cut(s) 645
BseBI CCWGG 5 cut(s) 717, 771, 909, 1122, 1953
BseCI ATCGAT 1 cut(s) 1040
BseDI CCNNGG 3 cut(s) 1554, 1652, 2103
BseJI GATNNNNATC 1 cut(s) 645
BseLI CCNNNNNNNGG 6 cut(s) 576, 1085, 1591, 1785, 2141, 2360
BseMI GCAATG 1 cut(s) 1327
BseNI ACTGG 9 cut(s) 685, 1273, 1367, 1420, 1428, 1786, 2072, 2322, 2527
BseRI GAGGAG 1 cut(s) 1037
BseYI CCCAGC 1 cut(s) 2253
BsgI GTGCAG 1 cut(s) 1146
BshFI GGCC 4 cut(s) 11, 684, 892, 1490
BshNI GGYRCC 1 cut(s) 1558
BshVI ATCGAT 1 cut(s) 1040
BsiHKAI GWGCWC 1 cut(s) 2039
BsiHKCI CYCGRG 1 cut(s) 258
BsiSI CCGG 2 cut(s) 144, 693
BslFI GGGAC 4 cut(s) 194, 463, 1414, 1992
BslI CCNNNNNNNGG 6 cut(s) 576, 1085, 1591, 1785, 2141, 2360
BsmAI GTCTC 5 cut(s) 233, 693, 1518, 2189, 2423
BsmFI GGGAC 4 cut(s) 194, 463, 1414, 1992
BsmI GAATGC 2 cut(s) 1852, 2342
BsnI GGCC 4 cut(s) 11, 684, 892, 1490
Bso31I GGTCTC 1 cut(s) 2189
BsoBI CYCGRG 1 cut(s) 258
Bsp119I TTCGAA 2 cut(s) 159, 1235
Bsp1286I GDGCHC 1 cut(s) 2039
Bsp1720I GCTNAGC 1 cut(s) 330
BspACI CCGC 7 cut(s) 395, 407, 522, 596, 1351, 1500, 1914
BspANI GGCC 4 cut(s) 11, 684, 892, 1490
BspDI ATCGAT 1 cut(s) 1040
BspLI GGNNCC 6 cut(s) 451, 452, 1332, 1504, 1560, 2320
BspMAI CTGCAG 1 cut(s) 2164
BspMI ACCTGC 2 cut(s) 668, 2153
BspOI GCTAGC 2 cut(s) 1904, 2544
BspPI GGATC 7 cut(s) 116, 488, 838, 859, 1096, 1609, 2034
BspQI GCTCTTC 1 cut(s) 1842
BspT104I TTCGAA 2 cut(s) 159, 1235
BspT107I GGYRCC 1 cut(s) 1558
BspTNI GGTCTC 1 cut(s) 2189
BsrDI GCAATG 1 cut(s) 1327
BsrI ACTGG 9 cut(s) 685, 1273, 1367, 1420, 1428, 1786, 2072, 2322, 2527
BssECI CCNNGG 3 cut(s) 1554, 1652, 2103
BssT1I CCWWGG 2 cut(s) 1652, 2103
Bst2UI CCWGG 5 cut(s) 717, 771, 909, 1122, 1953
Bst4CI ACNGT 6 cut(s) 901, 1194, 1831, 1927, 1993, 2054
Bst6I CTCTTC 3 cut(s) 59, 1349, 1842
BstAPI GCANNNNNTGC 2 cut(s) 313, 1466
BstBI TTCGAA 2 cut(s) 159, 1235
BstC8I GCNNGC 7 cut(s) 324, 1276, 1902, 2154, 2210, 2478, 2542
BstMAI GTCTC 5 cut(s) 233, 693, 1518, 2189, 2423
BstNI CCWGG 5 cut(s) 717, 771, 909, 1122, 1953
BstNSI RCATGY 5 cut(s) 80, 326, 1303, 2382, 2480
BstPAI GACNNNNGTC 1 cut(s) 2381
BstSCI CCNGG 7 cut(s) 142, 691, 715, 769, 907, 1120, 1951
BstSFI CTRYAG 4 cut(s) 117, 126, 1815, 2160
BstV2I GAAGAC 3 cut(s) 166, 836, 2377
BstX2I RGATCY 3 cut(s) 121, 1601, 2026
BstXI CCANNNNNNTGG 2 cut(s) 1021, 2527
BstYI RGATCY 3 cut(s) 121, 1601, 2026
Bsu15I ATCGAT 1 cut(s) 1040
BsuI GTATCC 1 cut(s) 2188
BsuRI GGCC 4 cut(s) 11, 684, 892, 1490
BsuTUI ATCGAT 1 cut(s) 1040
BtgZI GCGATG 1 cut(s) 175
BtsIMutI CAGTG 9 cut(s) 489, 1266, 1374, 1413, 1779, 1827, 1865, 2059, 2520
BveI ACCTGC 2 cut(s) 668, 2153
Cac8I GCNNGC 7 cut(s) 324, 1276, 1902, 2154, 2210, 2478, 2542
CaiI CAGNNNCTG 5 cut(s) 125, 1159, 1385, 1403, 1935
Cfr13I GGNCC 6 cut(s) 450, 821, 1382, 1418, 1489, 1582
ClaI ATCGAT 1 cut(s) 1040
CseI GACGC 2 cut(s) 2371, 2499
Csp6I GTAC 4 cut(s) 547, 711, 1076, 1968
CviQI GTAC 4 cut(s) 547, 711, 1076, 1968
DraIII CACNNNGTG 1 cut(s) 146
DrdI GACNNNNNNGTC 1 cut(s) 1925
DseDI GACNNNNNNGTC 1 cut(s) 1925
EaeI YGGCCR 1 cut(s) 682
Eam1104I CTCTTC 3 cut(s) 59, 1349, 1842
EarI CTCTTC 3 cut(s) 59, 1349, 1842
EciI GGCGGA 1 cut(s) 1366
Eco130I CCWWGG 2 cut(s) 1652, 2103
Eco31I GGTCTC 1 cut(s) 2189
Eco47I GGWCC 5 cut(s) 450, 821, 1382, 1418, 1582
Eco57I CTGAAG 8 cut(s) 83, 123, 237, 902, 902, 950, 1362, 2520
Eco88I CYCGRG 1 cut(s) 258
EcoO109I RGGNCCY 2 cut(s) 450, 1382
EcoRI GAATTC 1 cut(s) 912
EcoRII CCWGG 5 cut(s) 715, 769, 907, 1120, 1951
EcoT14I CCWWGG 2 cut(s) 1652, 2103
ErhI CCWWGG 2 cut(s) 1652, 2103
FalI AAGNNNNNCTT 2 cut(s) 2013, 2045
FaqI GGGAC 4 cut(s) 194, 463, 1414, 1992
FauI CCCGC 2 cut(s) 402, 414
FbaI TGATCA 1 cut(s) 1324
FblI GTMKAC 2 cut(s) 1814, 1838
FspBI CTAG 9 cut(s) 195, 1029, 1541, 1653, 1887, 1901, 2276, 2492, 2541
GsaI CCCAGC 1 cut(s) 2257
GsuI CTGGAG 5 cut(s) 738, 956, 1803, 2089, 2305
HaeIII GGCC 4 cut(s) 11, 684, 892, 1490
HapII CCGG 2 cut(s) 144, 693
HgaI GACGC 2 cut(s) 2371, 2499
HincII GTYRAC 1 cut(s) 1220
HindII GTYRAC 1 cut(s) 1220
HpaII CCGG 2 cut(s) 144, 693
HphI GGTGA 5 cut(s) 629, 673, 1425, 2177, 2279
Hpy166II GTNNAC 6 cut(s) 250, 713, 1220, 1433, 1815, 1839
Hpy188III TCNNGA 4 cut(s) 260, 824, 2077, 2557
Hpy8I GTNNAC 6 cut(s) 250, 713, 1220, 1433, 1815, 1839
HpyCH4III ACNGT 6 cut(s) 901, 1194, 1831, 1927, 1993, 2054
HpyCH4IV ACGT 2 cut(s) 1068, 1083
HpySE526I ACGT 2 cut(s) 1068, 1083
KflI GGGWCCC 1 cut(s) 450
Ksp22I TGATCA 1 cut(s) 1324
LguI GCTCTTC 1 cut(s) 1842
LmnI GCTCC 5 cut(s) 262, 975, 1050, 1336, 2324
MaeI CTAG 9 cut(s) 195, 1029, 1541, 1653, 1887, 1901, 2276, 2492, 2541
MaeII ACGT 2 cut(s) 1068, 1083
MaeIII GTNAC 4 cut(s) 617, 1748, 1998, 2349
MfeI CAATTG 1 cut(s) 13
MflI RGATCY 3 cut(s) 121, 1601, 2026
MhlI GDGCHC 1 cut(s) 2039
MlsI TGGCCA 1 cut(s) 684
MluNI TGGCCA 1 cut(s) 684
MlyI GAGTC 6 cut(s) 235, 766, 871, 1225, 1829, 2288
MmeI TCCRAC 2 cut(s) 15, 1066
Mox20I TGGCCA 1 cut(s) 684
MroXI GAANNNNTTC 1 cut(s) 112
MscI TGGCCA 1 cut(s) 684
MseI TTAA 5 cut(s) 462, 560, 896, 957, 2214
MslI CAYNNNNRTG 3 cut(s) 1641, 2481, 2525
Msp20I TGGCCA 1 cut(s) 684
MspA1I CMGCKG 4 cut(s) 224, 1159, 1289, 1916
MspI CCGG 2 cut(s) 144, 693
MspR9I CCNGG 7 cut(s) 144, 693, 717, 771, 909, 1122, 1953
MunI CAATTG 1 cut(s) 13
Mva1269I GAATGC 2 cut(s) 1852, 2342
MvaI CCWGG 5 cut(s) 717, 771, 909, 1122, 1953
NciI CCSGG 2 cut(s) 144, 693
NheI GCTAGC 2 cut(s) 1900, 2540
NlaIV GGNNCC 6 cut(s) 451, 452, 1332, 1504, 1560, 2320
NmuCI GTSAC 3 cut(s) 617, 1748, 1998
NspI RCATGY 5 cut(s) 80, 326, 1303, 2382, 2480
NspV TTCGAA 2 cut(s) 159, 1235
PaeI GCATGC 2 cut(s) 326, 2480
PaqCI CACCTGC 2 cut(s) 668, 2153
PciSI GCTCTTC 1 cut(s) 1842
PctI GAATGC 2 cut(s) 1852, 2342
PdmI GAANNNNTTC 1 cut(s) 112
PfeI GAWTC 8 cut(s) 628, 641, 733, 1237, 1339, 1622, 1878, 2258
PfoI TCCNGGA 1 cut(s) 769
PleI GAGTC 6 cut(s) 235, 765, 871, 1224, 1828, 2288
PpsI GAGTC 6 cut(s) 235, 765, 871, 1224, 1828, 2288
PpuMI RGGWCCY 2 cut(s) 450, 1382
PshAI GACNNNNGTC 1 cut(s) 2381
Psp1406I AACGTT 2 cut(s) 1068, 1083
Psp5II RGGWCCY 2 cut(s) 450, 1382
Psp6I CCWGG 5 cut(s) 715, 769, 907, 1120, 1951
PspFI CCCAGC 1 cut(s) 2253
PspGI CCWGG 5 cut(s) 715, 769, 907, 1120, 1951
PspN4I GGNNCC 6 cut(s) 451, 452, 1332, 1504, 1560, 2320
PspPI GGNCC 6 cut(s) 450, 821, 1382, 1418, 1489, 1582
PspPPI RGGWCCY 2 cut(s) 450, 1382
PstI CTGCAG 1 cut(s) 2164
PstNI CAGNNNCTG 5 cut(s) 125, 1159, 1385, 1403, 1935
PsuI RGATCY 3 cut(s) 121, 1601, 2026
PvuII CAGCTG 3 cut(s) 224, 1159, 1289
RsaI GTAC 4 cut(s) 548, 712, 1077, 1969
RsaNI GTAC 4 cut(s) 547, 711, 1076, 1968
RseI CAYNNNNRTG 3 cut(s) 1641, 2481, 2525
SapI GCTCTTC 1 cut(s) 1842
SaqAI TTAA 5 cut(s) 462, 560, 896, 957, 2214
Sau96I GGNCC 6 cut(s) 450, 821, 1382, 1418, 1489, 1582
SchI GAGTC 6 cut(s) 235, 766, 871, 1225, 1829, 2288
ScrFI CCNGG 7 cut(s) 144, 693, 717, 771, 909, 1122, 1953
SduI GDGCHC 1 cut(s) 2039
SfcI CTRYAG 4 cut(s) 117, 126, 1815, 2160
SfuI TTCGAA 2 cut(s) 159, 1235
SinI GGWCC 5 cut(s) 450, 821, 1382, 1418, 1582
SmiMI CAYNNNNRTG 3 cut(s) 1641, 2481, 2525
SmlI CTYRAG 1 cut(s) 243
SmoI CTYRAG 1 cut(s) 243
SphI GCATGC 2 cut(s) 326, 2480
SsiI CCGC 7 cut(s) 395, 407, 522, 596, 1351, 1500, 1914
SspMI CTAG 9 cut(s) 195, 1029, 1541, 1653, 1887, 1901, 2276, 2492, 2541
StyD4I CCNGG 7 cut(s) 142, 691, 715, 769, 907, 1120, 1951
StyI CCWWGG 2 cut(s) 1652, 2103
TaaI ACNGT 6 cut(s) 901, 1194, 1831, 1927, 1993, 2054
TaiI ACGT 2 cut(s) 1071, 1086
TaqII GACCGA 2 cut(s) 1599, 2213
TauI GCSGC 1 cut(s) 599
TfiI GAWTC 8 cut(s) 628, 641, 733, 1237, 1339, 1622, 1878, 2258
Tru1I TTAA 5 cut(s) 462, 560, 896, 957, 2214
Tru9I TTAA 5 cut(s) 462, 560, 896, 957, 2214
TscAI CASTG 9 cut(s) 496, 1273, 1374, 1420, 1786, 1834, 1865, 2059, 2527
TseFI GTSAC 3 cut(s) 617, 1748, 1998
Tsp45I GTSAC 3 cut(s) 617, 1748, 1998
TspDTI ATGAA 8 cut(s) 178, 219, 617, 641, 818, 836, 873, 1160
TspGWI ACGGA 1 cut(s) 1883
TspRI CASTG 9 cut(s) 496, 1273, 1374, 1420, 1786, 1834, 1865, 2059, 2527
VpaK11BI GGWCC 5 cut(s) 450, 821, 1382, 1418, 1582
XapI RAATTY 5 cut(s) 70, 912, 928, 994, 2369
XceI RCATGY 5 cut(s) 80, 326, 1303, 2382, 2480
XcmI CCANNNNNNNNNTGG 1 cut(s) 461
XmaJI CCTAGG 1 cut(s) 1652
XmiI GTMKAC 2 cut(s) 1814, 1838
XmnI GAANNNNTTC 1 cut(s) 112
XspI CTAG 9 cut(s) 195, 1029, 1541, 1653, 1887, 1901, 2276, 2492, 2541
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.