Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0001330

Physical Location & Seq

Genomic Coordinates Forward (+)

26482910 .. 26485788

Gene Structure 2879 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G249500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 771 bp

ATGGTGGGACCGGCGAGGCCTCTGTTTGTTCTGTTCGGATCCTCCATAGTCCAGATGAGCTACGACCACGGCGGTTGGGGTGCCATTCTCTCTGACATCTACTCTCGTCGAGCAGACATATTGTTGCGTGGTTACTTTGGTTGGAATTCACGGCGAGCTGTAGAGGTCCTAGATCAAGTTTTCCCCAAGGATGCTGCTGTGCAACCTTCTTTGGTGATTGTATATTTTGGCGGTAATGATTCTATGGGGTCTCATTCATCGGGCCTAGGCCCTCATGTACCACTTCCTGAATACATTGACAACATGAGAAAGATTGCAAGTCATGTCAAGAGCCTTTCAGCCTCAACACGCACCATTTTTCTTAGTTGTCCTCCTGTGAATGAGGCGATAATTCGTGGAAGTACAAGCGGGATTTTCAGCGAGATAGTAAGAACAAACGAGTTATGCCAACAGTATTCGGAAGCTTGTATAAAGCTGTGCCAGGAAATGGATATCAAGGTTGTTGATCTTTTTACTGCATTTCAGAAAACAGATGACTGGTTGAACGCTTGTTTTACAGATGGGATTCATTTATCTGCTGAAGGGAGCAAAATAGTGGTGGAAGAGATACTGAAGGTACTGAGGGAAGCTGACTGGAAGCCAAGCTTACACTGGAAATCCATGCCATTAGAATTTGCAGAGGATTCACCATATGATCTTGTTGCTGCTGATGGAAAGACAACATTAAATCCCTCCAGCTGGACTTTTTATAGGGAGATTCAGTGGGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0048046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lipase_GDSL Lipase_GDSL_2

Protein Analysis

257

Amino Acids

28.6

Weight (kDa)

5.27

Isoelectric Point (pI)

43.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001330)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11210
fragaria_vesca	FvH4_4g09350 FvH4_6g11460 FvH4_6g11470 FvH4_6g17731 FvH4_7g24410 FvH4_7g24410 FvH4_7g24410
malus_domestica	MD01G1152500.v1.1 MD04G1152200.v1.1 MD04G1152600.v1.1 MD07G1221600.v1.1
prunus_persica	Prupe.2G249500_v2.0.a1 Prupe.2G249500_v2.0.a1 Prupe.6G277200_v2.0.a1 Prupe.6G277200_v2.0.a1
pyrus_communis	pycom01g17020 pycom04g13820 pycom04g13830 pycom07g20000
rosa_chinensis	RchiOBHm_Chr1g0370111 RchiOBHm_Chr3g0463151 RchiOBHm_Chr3g0463161 RchiOBHm_Chr4g0412941
rosa_laevigata	RLG00000024807 RLG00000024809 RLG00000027073
rosa_multiflora	Rmu_sc0008124.1_g000006 Rmu_sc0011509.1_g000001
rosa_roxburghii	Rroxscaffold_4G00286810 Rroxscaffold_6G00416920 Rroxscaffold_6G00416930
rosa_rugosa	Rorug01G0354100 Rorug01G0354200 Rorug03G0061800 Rorug03G0061800 Rorug03G0061800 Rorug03G0061800
rosa_samantha	Rh1AG362700 Rh1BG325900 Rh1CG339200 Rh3AG120000 Rh3AG120100 Rh3BG124400 Rh3BG124500 Rh3CG126400 Rh3CG126500 Rh3DG125400 Rh3DG125500 Rh4AG176700 Rh4CG187700
rosa_wichuraiana	Rw1G031920 Rw3G010150 Rw3G010160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	80
AccB7I	CCANNNNNTGG	1 cut(s)	487
AciI	CCGC	3 cut(s)	72, 231, 408
AclWI	GGATC	2 cut(s)	33, 46
AcsI	RAATTY	2 cut(s)	145, 671
AcuI	CTGAAG	2 cut(s)	600, 632
AfaI	GTAC	3 cut(s)	279, 403, 618
AfiI	CCNNNNNNNGG	2 cut(s)	487, 738
AgsI	TTSAA	1 cut(s)	544
AjnI	CCWGG	1 cut(s)	480
AluBI	AGCT	7 cut(s)	60, 158, 464, 475, 629, 645, 738
AluI	AGCT	7 cut(s)	60, 158, 464, 475, 629, 645, 738
Alw26I	GTCTC	1 cut(s)	255
AlwI	GGATC	2 cut(s)	33, 46
AoxI	GGCC	3 cut(s)	17, 262, 268
ApeKI	GCWGC	2 cut(s)	194, 704
ApoI	RAATTY	2 cut(s)	145, 671
AspA2I	CCTAGG	1 cut(s)	265
AspS9I	GGNCC	4 cut(s)	8, 166, 262, 269
AsuHPI	GGTGA	2 cut(s)	226, 678
AvaII	GGWCC	2 cut(s)	8, 166
AvrII	CCTAGG	1 cut(s)	265
BamHI	GGATCC	1 cut(s)	38
BanI	GGYRCC	1 cut(s)	80
BbvI	GCAGC	2 cut(s)	181, 691
BccI	CCATC	2 cut(s)	554, 704
BceAI	ACGGC	2 cut(s)	85, 167
BciT130I	CCWGG	1 cut(s)	482
BcoDI	GTCTC	1 cut(s)	255
BfaI	CTAG	3 cut(s)	170, 266, 769
BfmI	CTRYAG	1 cut(s)	159
BisI	GCNGC	2 cut(s)	195, 705
BlnI	CCTAGG	1 cut(s)	265
BlsI	GCNGC	2 cut(s)	196, 706
Bme1390I	CCNGG	1 cut(s)	482
Bme18I	GGWCC	2 cut(s)	8, 166
BmgT120I	GGNCC	4 cut(s)	8, 166, 262, 269
BmiI	GGNNCC	3 cut(s)	9, 40, 82
BmrFI	CCNGG	1 cut(s)	482
BmsI	GCATC	1 cut(s)	181
BpmI	CTGGAG	1 cut(s)	718
BsaI	GGTCTC	1 cut(s)	255
BsaJI	CCNNGG	3 cut(s)	67, 186, 265
BsaXI	ACNNNNNCTCC	1 cut(s)	746
Bsc4I	CCNNNNNNNGG	2 cut(s)	487, 738
Bse118I	RCCGGY	1 cut(s)	10
Bse1I	ACTGG	3 cut(s)	542, 638, 656
BseBI	CCWGG	1 cut(s)	482
BseDI	CCNNGG	3 cut(s)	67, 186, 265
BseGI	GGATG	1 cut(s)	196
BseLI	CCNNNNNNNGG	2 cut(s)	487, 738
BseMII	CTCAG	1 cut(s)	611
BseNI	ACTGG	3 cut(s)	542, 638, 656
BseXI	GCAGC	2 cut(s)	181, 691
BshFI	GGCC	3 cut(s)	19, 264, 270
BshNI	GGYRCC	1 cut(s)	80
BsiSI	CCGG	1 cut(s)	11
BslFI	GGGAC	1 cut(s)	21
BslI	CCNNNNNNNGG	2 cut(s)	487, 738
BsmAI	GTCTC	1 cut(s)	255
BsmFI	GGGAC	1 cut(s)	21
BsnI	GGCC	3 cut(s)	19, 264, 270
Bso31I	GGTCTC	1 cut(s)	255
Bsp143I	GATC	4 cut(s)	38, 172, 505, 694
BspACI	CCGC	3 cut(s)	72, 231, 408
BspANI	GGCC	3 cut(s)	19, 264, 270
BspCNI	CTCAG	1 cut(s)	612
BspLI	GGNNCC	3 cut(s)	9, 40, 82
BspPI	GGATC	2 cut(s)	33, 46
BspT107I	GGYRCC	1 cut(s)	80
BspTNI	GGTCTC	1 cut(s)	255
BsrFI	RCCGGY	1 cut(s)	10
BsrI	ACTGG	3 cut(s)	542, 638, 656
BssAI	RCCGGY	1 cut(s)	10
BssECI	CCNNGG	3 cut(s)	67, 186, 265
BssMI	GATC	4 cut(s)	38, 172, 505, 694
BssT1I	CCWWGG	2 cut(s)	186, 265
Bst2UI	CCWGG	1 cut(s)	482
Bst4CI	ACNGT	1 cut(s)	453
Bst6I	CTCTTC	1 cut(s)	597
BstC8I	GCNNGC	1 cut(s)	156
BstDEI	CTNAG	2 cut(s)	362, 620
BstDSI	CCRYGG	1 cut(s)	67
BstF5I	GGATG	1 cut(s)	196
BstKTI	GATC	4 cut(s)	41, 175, 508, 697
BstMAI	GTCTC	1 cut(s)	255
BstMBI	GATC	4 cut(s)	38, 172, 505, 694
BstNI	CCWGG	1 cut(s)	482
BstSCI	CCNGG	1 cut(s)	480
BstSFI	CTRYAG	1 cut(s)	159
BstV1I	GCAGC	2 cut(s)	181, 691
BstX2I	RGATCY	1 cut(s)	38
BstYI	RGATCY	1 cut(s)	38
BsuRI	GGCC	3 cut(s)	19, 264, 270
BtgI	CCRYGG	1 cut(s)	67
BtsCI	GGATG	1 cut(s)	196
BtsIMutI	CAGTG	2 cut(s)	649, 767
Cac8I	GCNNGC	1 cut(s)	156
Cfr10I	RCCGGY	1 cut(s)	10
Cfr13I	GGNCC	4 cut(s)	8, 166, 262, 269
Csp6I	GTAC	3 cut(s)	278, 402, 617
CspCI	CAANNNNNGTGG	2 cut(s)	56, 91
CviAII	CATG	4 cut(s)	275, 304, 323, 661
CviQI	GTAC	3 cut(s)	278, 402, 617
DdeI	CTNAG	2 cut(s)	362, 620
DpnI	GATC	4 cut(s)	40, 174, 507, 696
DpnII	GATC	4 cut(s)	38, 172, 505, 694
Eam1104I	CTCTTC	1 cut(s)	597
EarI	CTCTTC	1 cut(s)	597
Eco130I	CCWWGG	2 cut(s)	186, 265
Eco147I	AGGCCT	1 cut(s)	19
Eco31I	GGTCTC	1 cut(s)	255
Eco32I	GATATC	1 cut(s)	493
Eco47I	GGWCC	2 cut(s)	8, 166
Eco57I	CTGAAG	2 cut(s)	600, 632
EcoO109I	RGGNCCY	2 cut(s)	166, 269
EcoRI	GAATTC	1 cut(s)	145
EcoRII	CCWGG	1 cut(s)	480
EcoRV	GATATC	1 cut(s)	493
EcoT14I	CCWWGG	2 cut(s)	186, 265
ErhI	CCWWGG	2 cut(s)	186, 265
FaeI	CATG	4 cut(s)	278, 307, 326, 664
FalI	AAGNNNNNCTT	2 cut(s)	629, 661
FaqI	GGGAC	1 cut(s)	21
FatI	CATG	4 cut(s)	274, 303, 322, 660
FauI	CCCGC	1 cut(s)	401
FauNDI	CATATG	1 cut(s)	691
Fnu4HI	GCNGC	2 cut(s)	195, 705
FokI	GGATG	1 cut(s)	203
Fsp4HI	GCNGC	2 cut(s)	195, 705
FspBI	CTAG	3 cut(s)	170, 266, 769
GluI	GCNGC	2 cut(s)	195, 705
GsuI	CTGGAG	1 cut(s)	718
HaeIII	GGCC	3 cut(s)	19, 264, 270
HapII	CCGG	1 cut(s)	11
Hin1II	CATG	4 cut(s)	278, 307, 326, 664
HindIII	AAGCTT	2 cut(s)	462, 643
HinfI	GANTC	4 cut(s)	239, 565, 683, 757
HpaII	CCGG	1 cut(s)	11
HphI	GGTGA	2 cut(s)	226, 678
Hpy188I	TCNGA	4 cut(s)	38, 94, 460, 525
Hpy188III	TCNNGA	3 cut(s)	52, 287, 328
Hpy99I	CGWCG	1 cut(s)	111
HpyAV	CCTTC	3 cut(s)	216, 575, 607
HpyCH4III	ACNGT	1 cut(s)	453
HpyCH4V	TGCA	4 cut(s)	202, 317, 518, 677
HpyF3I	CTNAG	2 cut(s)	362, 620
Hsp92II	CATG	4 cut(s)	278, 307, 326, 664
Kzo9I	GATC	4 cut(s)	38, 172, 505, 694
LmnI	GCTCC	1 cut(s)	585
Lsp1109I	GCAGC	2 cut(s)	181, 691
LweI	GCATC	1 cut(s)	181
MaeI	CTAG	3 cut(s)	170, 266, 769
MaeIII	GTNAC	1 cut(s)	131
MalI	GATC	4 cut(s)	40, 174, 507, 696
MboI	GATC	4 cut(s)	38, 172, 505, 694
MboII	GAAGA	1 cut(s)	614
MflI	RGATCY	1 cut(s)	38
MluCI	AATT	3 cut(s)	145, 390, 671
MmeI	TCCRAC	1 cut(s)	122
MseI	TTAA	1 cut(s)	725
MspA1I	CMGCKG	1 cut(s)	738
MspI	CCGG	1 cut(s)	11
MspR9I	CCNGG	1 cut(s)	482
MvaI	CCWGG	1 cut(s)	482
NdeI	CATATG	1 cut(s)	691
NdeII	GATC	4 cut(s)	38, 172, 505, 694
NlaIII	CATG	4 cut(s)	278, 307, 326, 664
NlaIV	GGNNCC	3 cut(s)	9, 40, 82
PceI	AGGCCT	1 cut(s)	19
PfeI	GAWTC	4 cut(s)	239, 565, 683, 757
PflMI	CCANNNNNTGG	1 cut(s)	487
PkrI	GCNGC	2 cut(s)	196, 706
PpuMI	RGGWCCY	1 cut(s)	166
Psp5II	RGGWCCY	1 cut(s)	166
Psp6I	CCWGG	1 cut(s)	480
PspGI	CCWGG	1 cut(s)	480
PspN4I	GGNNCC	3 cut(s)	9, 40, 82
PspPI	GGNCC	4 cut(s)	8, 166, 262, 269
PspPPI	RGGWCCY	1 cut(s)	166
PsuI	RGATCY	1 cut(s)	38
PvuII	CAGCTG	1 cut(s)	738
RsaI	GTAC	3 cut(s)	279, 403, 618
RsaNI	GTAC	3 cut(s)	278, 402, 617
SaqAI	TTAA	1 cut(s)	725
SatI	GCNGC	2 cut(s)	195, 705
Sau3AI	GATC	4 cut(s)	38, 172, 505, 694
Sau96I	GGNCC	4 cut(s)	8, 166, 262, 269
ScrFI	CCNGG	1 cut(s)	482
SfaNI	GCATC	1 cut(s)	181
SfcI	CTRYAG	1 cut(s)	159
SinI	GGWCC	2 cut(s)	8, 166
Sse9I	AATT	3 cut(s)	145, 390, 671
SseBI	AGGCCT	1 cut(s)	19
SsiI	CCGC	3 cut(s)	72, 231, 408
SspMI	CTAG	3 cut(s)	170, 266, 769
StuI	AGGCCT	1 cut(s)	19
StyD4I	CCNGG	1 cut(s)	480
StyI	CCWWGG	2 cut(s)	186, 265
TaaI	ACNGT	1 cut(s)	453
TaqI	TCGA	1 cut(s)	109
TasI	AATT	3 cut(s)	145, 390, 671
TatI	WGTACW	1 cut(s)	401
TfiI	GAWTC	4 cut(s)	239, 565, 683, 757
Tru1I	TTAA	1 cut(s)	725
Tru9I	TTAA	1 cut(s)	725
TscAI	CASTG	2 cut(s)	656, 767
TseI	GCWGC	2 cut(s)	194, 704
TspDTI	ATGAA	2 cut(s)	246, 557
TspRI	CASTG	2 cut(s)	656, 767
Van91I	CCANNNNNTGG	1 cut(s)	487
VpaK11BI	GGWCC	2 cut(s)	8, 166
XapI	RAATTY	2 cut(s)	145, 671
XcmI	CCANNNNNNNNNTGG	1 cut(s)	648
XmaJI	CCTAGG	1 cut(s)	265
XspI	CTAG	3 cut(s)	170, 266, 769

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.