Prupe.3G218100_v2.0.a1

Protein of unknown function (DUF2781)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0001495
Physical Location & Seq
Forward (+)
21990414 .. 21991424
1011 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G218100.1

Sequence Viewer

Length: 507 bp
ATGGGTGTTCTTGTCAAGCTCATTGATGCCTTGCTCTTCCTCTTGCTCCTGGCGATTGCTTTTGAAAAGCCATTGATCGAAGCACAAGCATGTCTCCCCGGCGACCTCTACCCCAACATTCTGGTGGACCTCAGGAACTGGTATGCCCGCGAGTCGGGCGACTATCTCATGACGGAGATGCCCGATTTCTATGTCGGGATCATGTGGGTTGAGCTTGTTTTTCAATTGCCTCTCGTGTTCATCAACCTTTATGGAATCTTGACTGGCAAACCTTGGTTCAACATCACGTGCTTGAGCTATGGCATCTCTCTTTTCACTTCTATGGTGCCTATATTTGCAGAATTGACGGGGTCAGGAAGGGCACCTGATAAGCTCTTGACTCTGTATTTTTCTTTCTTGAGTTTAGGTGTTTTGGCCATACTGCGTGGGCTGCTACCAACCTCATCAACCAGGTCTTCTGCAACCATAGGCAAGAGACCTGCTTCCGGTAGGAAGAAGAAAGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2781

Protein Analysis

169

Amino Acids

18.66

Weight (kDa)

8.91

Isoelectric Point (pI)

40.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 487
AccB1I GGYRCC 2 cut(s) 325, 361
AccII CGCG 1 cut(s) 150
AciI CCGC 1 cut(s) 148
AclWI GGATC 1 cut(s) 206
AcoI YGGCCR 1 cut(s) 414
AcvI CACGTG 1 cut(s) 288
AfiI CCNNNNNNNGG 2 cut(s) 154, 485
AgsI TTSAA 3 cut(s) 65, 224, 280
AjnI CCWGG 2 cut(s) 48, 449
AluBI AGCT 4 cut(s) 19, 214, 297, 373
AluI AGCT 4 cut(s) 19, 214, 297, 373
Alw26I GTCTC 2 cut(s) 98, 469
AlwI GGATC 1 cut(s) 206
AlwNI CAGNNNCTG 1 cut(s) 138
AoxI GGCC 1 cut(s) 414
ApeKI GCWGC 1 cut(s) 430
AspS9I GGNCC 1 cut(s) 127
AsuC2I CCSGG 1 cut(s) 99
AvaII GGWCC 1 cut(s) 127
AxyI CCTNAGG 1 cut(s) 131
BaeGI GKGCMC 1 cut(s) 364
BalI TGGCCA 1 cut(s) 416
BanI GGYRCC 2 cut(s) 325, 361
BauI CACGAG 1 cut(s) 233
BbrPI CACGTG 1 cut(s) 288
BbsI GAAGAC 1 cut(s) 447
BbvI GCAGC 1 cut(s) 417
BciT130I CCWGG 2 cut(s) 50, 451
BcnI CCSGG 1 cut(s) 99
BcoDI GTCTC 2 cut(s) 98, 469
BfuAI ACCTGC 1 cut(s) 487
BisI GCNGC 1 cut(s) 431
BlsI GCNGC 1 cut(s) 432
Bme1390I CCNGG 3 cut(s) 50, 99, 451
Bme18I GGWCC 1 cut(s) 127
BmgT120I GGNCC 1 cut(s) 127
BmiI GGNNCC 2 cut(s) 327, 363
BmrFI CCNGG 3 cut(s) 50, 99, 451
BmsI GCATC 3 cut(s) 16, 168, 312
BpiI GAAGAC 1 cut(s) 447
BpuEI CTTGAG 2 cut(s) 313, 418
BpuMI CCSGG 1 cut(s) 99
BsaAI YACGTR 1 cut(s) 288
BsaI GGTCTC 1 cut(s) 469
BsaJI CCNNGG 2 cut(s) 97, 272
BsaWI WCCGGW 1 cut(s) 485
Bsc4I CCNNNNNNNGG 2 cut(s) 154, 485
Bse1I ACTGG 2 cut(s) 143, 268
Bse21I CCTNAGG 1 cut(s) 131
BseBI CCWGG 2 cut(s) 50, 451
BseDI CCNNGG 2 cut(s) 97, 272
BseLI CCNNNNNNNGG 2 cut(s) 154, 485
BseMII CTCAG 1 cut(s) 145
BseNI ACTGG 2 cut(s) 143, 268
BseSI GKGCMC 1 cut(s) 364
BseXI GCAGC 1 cut(s) 417
Bsh1236I CGCG 1 cut(s) 150
BshFI GGCC 1 cut(s) 416
BshNI GGYRCC 2 cut(s) 325, 361
BsiSI CCGG 2 cut(s) 99, 486
BslI CCNNNNNNNGG 2 cut(s) 154, 485
BsmAI GTCTC 2 cut(s) 98, 469
BsnI GGCC 1 cut(s) 416
Bso31I GGTCTC 1 cut(s) 469
Bsp1286I GDGCHC 1 cut(s) 364
Bsp143I GATC 2 cut(s) 75, 198
BspACI CCGC 1 cut(s) 148
BspANI GGCC 1 cut(s) 416
BspCNI CTCAG 1 cut(s) 144
BspFNI CGCG 1 cut(s) 150
BspHI TCATGA 1 cut(s) 168
BspLI GGNNCC 2 cut(s) 327, 363
BspMI ACCTGC 1 cut(s) 487
BspPI GGATC 1 cut(s) 206
BspQI GCTCTTC 1 cut(s) 41
BspT107I GGYRCC 2 cut(s) 325, 361
BspTNI GGTCTC 1 cut(s) 469
BsrI ACTGG 2 cut(s) 143, 268
BssECI CCNNGG 2 cut(s) 97, 272
BssMI GATC 2 cut(s) 75, 198
BssSI CACGAG 1 cut(s) 233
BssT1I CCWWGG 1 cut(s) 272
Bst2BI CACGAG 1 cut(s) 233
Bst2UI CCWGG 2 cut(s) 50, 451
Bst6I CTCTTC 1 cut(s) 41
BstBAI YACGTR 1 cut(s) 288
BstC8I GCNNGC 1 cut(s) 148
BstDEI CTNAG 1 cut(s) 131
BstFNI CGCG 1 cut(s) 150
BstKTI GATC 2 cut(s) 78, 201
BstMAI GTCTC 2 cut(s) 98, 469
BstMBI GATC 2 cut(s) 75, 198
BstMWI GCNNNNNNNGC 2 cut(s) 156, 430
BstNI CCWGG 2 cut(s) 50, 451
BstNSI RCATGY 1 cut(s) 93
BstSCI CCNGG 3 cut(s) 48, 97, 449
BstSLI GKGCMC 1 cut(s) 364
BstUI CGCG 1 cut(s) 150
BstV1I GCAGC 1 cut(s) 417
BstV2I GAAGAC 1 cut(s) 447
BstXI CCANNNNNNTGG 1 cut(s) 121
Bsu36I CCTNAGG 1 cut(s) 131
BsuRI GGCC 1 cut(s) 416
BveI ACCTGC 1 cut(s) 487
Cac8I GCNNGC 1 cut(s) 148
CaiI CAGNNNCTG 1 cut(s) 138
CciI TCATGA 1 cut(s) 168
Cfr13I GGNCC 1 cut(s) 127
CsiI ACCWGGT 1 cut(s) 449
CviAII CATG 3 cut(s) 90, 169, 202
CviJI RGCY 7 cut(s) 19, 70, 214, 297, 373, 416, 430
CviKI_1 RGCY 7 cut(s) 19, 70, 214, 297, 373, 416, 430
DdeI CTNAG 1 cut(s) 131
DpnI GATC 2 cut(s) 77, 200
DpnII GATC 2 cut(s) 75, 198
EaeI YGGCCR 1 cut(s) 414
Eam1104I CTCTTC 1 cut(s) 41
EarI CTCTTC 1 cut(s) 41
Eco130I CCWWGG 1 cut(s) 272
Eco31I GGTCTC 1 cut(s) 469
Eco47I GGWCC 1 cut(s) 127
Eco72I CACGTG 1 cut(s) 288
Eco81I CCTNAGG 1 cut(s) 131
EcoRII CCWGG 2 cut(s) 48, 449
EcoT14I CCWWGG 1 cut(s) 272
ErhI CCWWGG 1 cut(s) 272
FaeI CATG 3 cut(s) 93, 172, 205
FatI CATG 3 cut(s) 89, 168, 201
FauI CCCGC 1 cut(s) 155
Fnu4HI GCNGC 1 cut(s) 431
Fsp4HI GCNGC 1 cut(s) 431
GluI GCNGC 1 cut(s) 431
HaeIII GGCC 1 cut(s) 416
HapII CCGG 2 cut(s) 99, 486
Hin1II CATG 3 cut(s) 93, 172, 205
HinfI GANTC 3 cut(s) 152, 255, 379
HpaII CCGG 2 cut(s) 99, 486
Hpy166II GTNNAC 1 cut(s) 127
Hpy188III TCNNGA 7 cut(s) 133, 169, 196, 259, 354, 376, 397
Hpy8I GTNNAC 1 cut(s) 127
HpyAV CCTTC 1 cut(s) 351
HpyCH4IV ACGT 1 cut(s) 287
HpyCH4V TGCA 2 cut(s) 338, 461
HpyF10VI GCNNNNNNNGC 2 cut(s) 156, 430
HpyF3I CTNAG 1 cut(s) 131
HpySE526I ACGT 1 cut(s) 287
Hsp92II CATG 3 cut(s) 93, 172, 205
Kzo9I GATC 2 cut(s) 75, 198
LguI GCTCTTC 1 cut(s) 41
LmnI GCTCC 1 cut(s) 51
Lsp1109I GCAGC 1 cut(s) 417
LweI GCATC 3 cut(s) 16, 168, 312
MabI ACCWGGT 1 cut(s) 449
MaeII ACGT 1 cut(s) 287
MalI GATC 2 cut(s) 77, 200
MboI GATC 2 cut(s) 75, 198
MboII GAAGA 3 cut(s) 28, 447, 505
MfeI CAATTG 1 cut(s) 224
MhlI GDGCHC 1 cut(s) 364
MlsI TGGCCA 1 cut(s) 416
MluCI AATT 2 cut(s) 224, 341
MluNI TGGCCA 1 cut(s) 416
MlyI GAGTC 2 cut(s) 161, 373
MnlI CCTC 5 cut(s) 50, 116, 140, 240, 451
Mox20I TGGCCA 1 cut(s) 416
MscI TGGCCA 1 cut(s) 416
MseI TTAA 1 cut(s) 505
MslI CAYNNNNRTG 3 cut(s) 88, 122, 320
Msp20I TGGCCA 1 cut(s) 416
MspI CCGG 2 cut(s) 99, 486
MspR9I CCNGG 3 cut(s) 50, 99, 451
MunI CAATTG 1 cut(s) 224
MvaI CCWGG 2 cut(s) 50, 451
MvnI CGCG 1 cut(s) 150
MwoI GCNNNNNNNGC 2 cut(s) 156, 430
NciI CCSGG 1 cut(s) 99
NdeII GATC 2 cut(s) 75, 198
NlaIII CATG 3 cut(s) 93, 172, 205
NlaIV GGNNCC 2 cut(s) 327, 363
NspI RCATGY 1 cut(s) 93
PagI TCATGA 1 cut(s) 168
PciSI GCTCTTC 1 cut(s) 41
PfeI GAWTC 1 cut(s) 255
PflFI GACNNNGTC 1 cut(s) 349
PkrI GCNGC 1 cut(s) 432
PleI GAGTC 2 cut(s) 160, 373
PmaCI CACGTG 1 cut(s) 288
PmlI CACGTG 1 cut(s) 288
PpsI GAGTC 2 cut(s) 160, 373
Ppu21I YACGTR 1 cut(s) 288
Psp6I CCWGG 2 cut(s) 48, 449
PspCI CACGTG 1 cut(s) 288
PspGI CCWGG 2 cut(s) 48, 449
PspN4I GGNNCC 2 cut(s) 327, 363
PspPI GGNCC 1 cut(s) 127
PstNI CAGNNNCTG 1 cut(s) 138
PsyI GACNNNGTC 1 cut(s) 349
RseI CAYNNNNRTG 3 cut(s) 88, 122, 320
SapI GCTCTTC 1 cut(s) 41
SaqAI TTAA 1 cut(s) 505
SatI GCNGC 1 cut(s) 431
Sau3AI GATC 2 cut(s) 75, 198
Sau96I GGNCC 1 cut(s) 127
SchI GAGTC 2 cut(s) 161, 373
ScrFI CCNGG 3 cut(s) 50, 99, 451
SduI GDGCHC 1 cut(s) 364
SexAI ACCWGGT 1 cut(s) 449
SfaNI GCATC 3 cut(s) 16, 168, 312
SinI GGWCC 1 cut(s) 127
SmiMI CAYNNNNRTG 3 cut(s) 88, 122, 320
SmlI CTYRAG 2 cut(s) 292, 397
SmoI CTYRAG 2 cut(s) 292, 397
Sse9I AATT 2 cut(s) 224, 341
SsiI CCGC 1 cut(s) 148
StyD4I CCNGG 3 cut(s) 48, 97, 449
StyI CCWWGG 1 cut(s) 272
TaiI ACGT 1 cut(s) 290
TaqI TCGA 1 cut(s) 78
TasI AATT 2 cut(s) 224, 341
TfiI GAWTC 1 cut(s) 255
Tru1I TTAA 1 cut(s) 505
Tru9I TTAA 1 cut(s) 505
TseI GCWGC 1 cut(s) 430
TspDTI ATGAA 1 cut(s) 229
TspGWI ACGGA 1 cut(s) 188
Tth111I GACNNNGTC 1 cut(s) 349
VpaK11BI GGWCC 1 cut(s) 127
XceI RCATGY 1 cut(s) 93
XcmI CCANNNNNNNNNTGG 1 cut(s) 121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.