Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0001981

Physical Location & Seq

Genomic Coordinates Reverse (-)

26684499 .. 26686326

Gene Structure 1828 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G303400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 849 bp

ATGGCCGTACTCAGCCGCCTCCAGCTCGTTGCATCTCAGCTAACTCGCCGCGGCCTCGGCCTTCCGGCCCGGAGGGGCTACGGATCGGCGGCTGCGGCTCAGCTGCAGTACGATGACGACTATTACTACGAAGATGAGGAAGAAGATCGGAGGACGGCGAATCGGAATCGAATGTTGGACTCGGACGGGTGGGTCCCGGGGAGAGGGATACAGTGGGTGTTGATAGGGGATAGAGGGGCAAAGAAGCACTTGTACACCGAGAGGCTCTCGAAGCTTCTGGAAGTTCCGCACATTTCTATGGGCACCCTCGTCCGCCAGGAGCTCAACCCTCGCTCTTCTCTCTACAAGCAGATTGCCAATGCTGTGAATGAAGGAAAGCTTGTTCCGGACGAAGTGATCTTTGCATTGTTGTCAAAGAGGTTGGAAGAAGGATACTACAGAGGTGAAAACGGATTCATTCTTGATGGAATTCCTCGAACAAGAATGCAAGCTGAGATTGTTGACCAAATTGTGGATATTGATTTGGTAGTGAATTTCAAATGCGCGAATGAGAACTTGGTGAAGCAGAATCTAGGAACTGGAAGCTCCTCTGCCTGTCAGGAATATCTTAGCTTGAGCAACTCCATCCCCATGCGTAATCTAAATCTGCAGTTGCCGGACGAACGACTGAAATCCTCCACTGCTGATGCAGAGCAGAGCAAGTCGTTGGAAGATTACTACAGAAAACAGAACAAACTCATCGATTTTCAAGTCAAAGCTGCGCCCGGAGAAACCTGGAAGGGGCTGTTGGCTGCTTTACATCTCCAGCATATAAATGCTGTCAGTTCTTCCCAGAAGCTAACTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00230 ko00730 ko01100 ko01110 ko01130 map00230 map00730 map01100 map01110 map01130

Pfam Domains

Protein Families

ADK

Protein Analysis

283

Amino Acids

31.7

Weight (kDa)

6.92

Isoelectric Point (pI)

41.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001981)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01820
fragaria_vesca	FvH4_6g53130
malus_domestica	MD06G1144200.v1.1 MD09G1013900.v1.1 MD09G1014300.v1.1 MD17G1014400.v1.1
prunus_persica	Prupe.3G303400_v2.0.a1
pyrus_communis	pycom06g13370 pycom07g09870
rosa_chinensis	RchiOBHm_Chr2g0175001 RchiOBHm_Chr7g0190491
rosa_laevigata	RLG00000004522 RLG00000010233 RLG00000022307 RLG00000022322
rosa_multiflora	Rmu_co7982852.1_g000001 Rmu_sc0001716.1_g000035 Rmu_sc0003920.1_g000002 Rmu_sc0010642.1_g000002 Rmu_sc0010806.1_g000001 Rmu_sc0014601.1_g000013 Rmu_sc0020514.1_g000002
rosa_roxburghii	Rroxscaffold_2G00077590 Rroxscaffold_3G00264550 Rroxscaffold_7G00211240
rosa_rugosa	Rorug02G0581000 Rorug05G0549400 Rorug06G0504900 Rorug06G0505000 Rorug06G0505000
rosa_samantha	Rh2AG661800 Rh2BG673100 Rh2CG416400 Rh2CG636200 Rh2DG686700 Rh6AG066000 Rh6BG058800 Rh6BG059000 Rh6BG059100 Rh7AG111000 Rh7BG113900 Rh7CG116000 Rh7DG114800
rosa_wichuraiana	Rw2G054250 Rw7G009690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	191
AccB1I	GGYRCC	1 cut(s)	302
AccB7I	CCANNNNNTGG	1 cut(s)	511
AccII	CGCG	2 cut(s)	51, 545
AccIII	TCCGGA	1 cut(s)	385
AciI	CCGC	7 cut(s)	16, 49, 51, 89, 95, 287, 313
AclWI	GGATC	1 cut(s)	91
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	2 cut(s)	468, 532
AfaI	GTAC	3 cut(s)	9, 110, 254
AfiI	CCNNNNNNNGG	3 cut(s)	203, 511, 780
AgsI	TTSAA	2 cut(s)	538, 749
AjnI	CCWGG	2 cut(s)	315, 773
AjuI	GAANNNNNNNTTGG	6 cut(s)	158, 190, 539, 571, 770, 802
AloI	GAACNNNNNNTCC	2 cut(s)	366, 398
Alw21I	GWGCWC	1 cut(s)	324
AlwI	GGATC	1 cut(s)	91
Ama87I	CYCGRG	1 cut(s)	196
Aor13HI	TCCGGA	1 cut(s)	385
AoxI	GGCC	4 cut(s)	3, 52, 58, 66
ApeKI	GCWGC	4 cut(s)	92, 103, 758, 791
ApoI	RAATTY	2 cut(s)	468, 532
AspLEI	GCGC	2 cut(s)	545, 763
AspS9I	GGNCC	2 cut(s)	67, 193
AsuC2I	CCSGG	4 cut(s)	70, 197, 198, 765
AsuHPI	GGTGA	2 cut(s)	455, 571
AvaI	CYCGRG	1 cut(s)	196
AvaII	GGWCC	1 cut(s)	193
BaeGI	GKGCMC	1 cut(s)	305
BanI	GGYRCC	1 cut(s)	302
BanII	GRGCYC	1 cut(s)	324
BarI	GAAGNNNNNNTAC	2 cut(s)	236, 268
Bbv12I	GWGCWC	1 cut(s)	324
BbvI	GCAGC	4 cut(s)	79, 90, 745, 778
BccI	CCATC	2 cut(s)	458, 632
BceAI	ACGGC	1 cut(s)	171
BciT130I	CCWGG	2 cut(s)	317, 775
BciVI	GTATCC	2 cut(s)	201, 425
BcnI	CCSGG	4 cut(s)	70, 197, 198, 765
BfaI	CTAG	1 cut(s)	572
BfmI	CTRYAG	4 cut(s)	104, 436, 647, 718
BfuI	GTATCC	2 cut(s)	201, 425
BisI	GCNGC	9 cut(s)	16, 49, 52, 90, 93, 96, 104, 759, 792
BlpI	GCTNAGC	1 cut(s)	99
BlsI	GCNGC	9 cut(s)	17, 50, 53, 91, 94, 97, 105, 760, 793
Bme1390I	CCNGG	6 cut(s)	70, 197, 198, 317, 765, 775
Bme18I	GGWCC	1 cut(s)	193
BmeT110I	CYCGRG	1 cut(s)	196
BmgT120I	GGNCC	2 cut(s)	67, 193
BmiI	GGNNCC	3 cut(s)	194, 195, 304
BmrFI	CCNGG	6 cut(s)	70, 197, 198, 317, 765, 775
BmsI	GCATC	2 cut(s)	41, 676
BplI	GAGNNNNNCTC	2 cut(s)	251, 283
BpmI	CTGGAG	2 cut(s)	5, 788
Bpu1102I	GCTNAGC	1 cut(s)	99
BpuEI	CTTGAG	1 cut(s)	634
BpuMI	CCSGG	4 cut(s)	70, 197, 198, 765
Bsa29I	ATCGAT	1 cut(s)	741
BsaJI	CCNNGG	4 cut(s)	49, 55, 196, 197
BsaWI	WCCGGW	1 cut(s)	385
Bsc4I	CCNNNNNNNGG	3 cut(s)	203, 511, 780
Bse1I	ACTGG	1 cut(s)	583
BseAI	TCCGGA	1 cut(s)	385
BseBI	CCWGG	2 cut(s)	317, 775
BseCI	ATCGAT	1 cut(s)	741
BseDI	CCNNGG	4 cut(s)	49, 55, 196, 197
BseGI	GGATG	1 cut(s)	624
BseLI	CCNNNNNNNGG	3 cut(s)	203, 511, 780
BseMII	CTCAG	4 cut(s)	25, 50, 113, 483
BseNI	ACTGG	1 cut(s)	583
BseRI	GAGGAG	1 cut(s)	577
BseSI	GKGCMC	1 cut(s)	305
BseXI	GCAGC	4 cut(s)	79, 90, 745, 778
Bsh1236I	CGCG	2 cut(s)	51, 545
BshFI	GGCC	4 cut(s)	5, 54, 60, 68
BshNI	GGYRCC	1 cut(s)	302
BshVI	ATCGAT	1 cut(s)	741
BsiHKAI	GWGCWC	1 cut(s)	324
BsiHKCI	CYCGRG	1 cut(s)	196
BsiSI	CCGG	6 cut(s)	65, 70, 197, 386, 656, 765
BslFI	GGGAC	1 cut(s)	179
BslI	CCNNNNNNNGG	3 cut(s)	203, 511, 780
BsmFI	GGGAC	1 cut(s)	179
BsmI	GAATGC	1 cut(s)	489
BsnI	GGCC	4 cut(s)	5, 54, 60, 68
BsoBI	CYCGRG	1 cut(s)	196
Bsp1286I	GDGCHC	2 cut(s)	305, 324
Bsp13I	TCCGGA	1 cut(s)	385
Bsp1407I	TGTACA	1 cut(s)	252
Bsp143I	GATC	3 cut(s)	83, 145, 396
Bsp1720I	GCTNAGC	1 cut(s)	99
BspACI	CCGC	7 cut(s)	16, 49, 51, 89, 95, 287, 313
BspANI	GGCC	4 cut(s)	5, 54, 60, 68
BspCNI	CTCAG	4 cut(s)	24, 49, 112, 484
BspDI	ATCGAT	1 cut(s)	741
BspEI	TCCGGA	1 cut(s)	385
BspFNI	CGCG	2 cut(s)	51, 545
BspLI	GGNNCC	3 cut(s)	194, 195, 304
BspMAI	CTGCAG	2 cut(s)	108, 651
BspPI	GGATC	1 cut(s)	91
BspQI	GCTCTTC	1 cut(s)	340
BspT107I	GGYRCC	1 cut(s)	302
BsrGI	TGTACA	1 cut(s)	252
BsrI	ACTGG	1 cut(s)	583
BssECI	CCNNGG	4 cut(s)	49, 55, 196, 197
BssMI	GATC	3 cut(s)	83, 145, 396
Bst2UI	CCWGG	2 cut(s)	317, 775
Bst4CI	ACNGT	1 cut(s)	213
Bst6I	CTCTTC	1 cut(s)	340
BstAUI	TGTACA	1 cut(s)	252
BstC8I	GCNNGC	1 cut(s)	489
BstDEI	CTNAG	5 cut(s)	11, 36, 99, 492, 608
BstDSI	CCRYGG	1 cut(s)	49
BstF5I	GGATG	1 cut(s)	624
BstFNI	CGCG	2 cut(s)	51, 545
BstHHI	GCGC	2 cut(s)	545, 763
BstKTI	GATC	3 cut(s)	86, 148, 399
BstMBI	GATC	3 cut(s)	83, 145, 396
BstMWI	GCNNNNNNNGC	3 cut(s)	57, 95, 271
BstNI	CCWGG	2 cut(s)	317, 775
BstSCI	CCNGG	6 cut(s)	68, 195, 196, 315, 763, 773
BstSFI	CTRYAG	4 cut(s)	104, 436, 647, 718
BstSLI	GKGCMC	1 cut(s)	305
BstUI	CGCG	2 cut(s)	51, 545
BstV1I	GCAGC	4 cut(s)	79, 90, 745, 778
Bsu15I	ATCGAT	1 cut(s)	741
BsuI	GTATCC	2 cut(s)	201, 425
BsuRI	GGCC	4 cut(s)	5, 54, 60, 68
BsuTUI	ATCGAT	1 cut(s)	741
BtgI	CCRYGG	1 cut(s)	49
BtsCI	GGATG	1 cut(s)	624
BtsI	GCAGTG	1 cut(s)	678
BtsIMutI	CAGTG	2 cut(s)	218, 678
Cac8I	GCNNGC	1 cut(s)	489
CfoI	GCGC	2 cut(s)	545, 763
Cfr13I	GGNCC	2 cut(s)	67, 193
Cfr42I	CCGCGG	1 cut(s)	52
Cfr9I	CCCGGG	1 cut(s)	196
ClaI	ATCGAT	1 cut(s)	741
Csp6I	GTAC	3 cut(s)	8, 109, 253
CviAII	CATG	2 cut(s)	631, 846
CviQI	GTAC	3 cut(s)	8, 109, 253
DdeI	CTNAG	5 cut(s)	11, 36, 99, 492, 608
DpnI	GATC	3 cut(s)	85, 147, 398
DpnII	GATC	3 cut(s)	83, 145, 396
DrdI	GACNNNNNNGTC	1 cut(s)	191
DseDI	GACNNNNNNGTC	1 cut(s)	191
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	340
EarI	CTCTTC	1 cut(s)	340
EciI	GGCGGA	1 cut(s)	302
Ecl136II	GAGCTC	1 cut(s)	322
Eco24I	GRGCYC	1 cut(s)	324
Eco47I	GGWCC	1 cut(s)	193
Eco53kI	GAGCTC	1 cut(s)	322
Eco88I	CYCGRG	1 cut(s)	196
EcoICRI	GAGCTC	1 cut(s)	322
EcoO109I	RGGNCCY	1 cut(s)	193
EcoRI	GAATTC	1 cut(s)	468
EcoRII	CCWGG	2 cut(s)	315, 773
EcoT38I	GRGCYC	1 cut(s)	324
FaeI	CATG	2 cut(s)	634, 849
FaiI	YATR	5 cut(s)	299, 632, 810, 812, 847
FalI	AAGNNNNNCTT	4 cut(s)	233, 265, 363, 395
FaqI	GGGAC	1 cut(s)	179
FatI	CATG	2 cut(s)	630, 845
Fnu4HI	GCNGC	9 cut(s)	16, 49, 52, 90, 93, 96, 104, 759, 792
FokI	GGATG	1 cut(s)	611
FriOI	GRGCYC	1 cut(s)	324
Fsp4HI	GCNGC	9 cut(s)	16, 49, 52, 90, 93, 96, 104, 759, 792
FspBI	CTAG	1 cut(s)	572
GlaI	GCGC	2 cut(s)	544, 762
GluI	GCNGC	9 cut(s)	16, 49, 52, 90, 93, 96, 104, 759, 792
GsuI	CTGGAG	2 cut(s)	5, 788
HaeIII	GGCC	4 cut(s)	5, 54, 60, 68
HapII	CCGG	6 cut(s)	65, 70, 197, 386, 656, 765
HhaI	GCGC	2 cut(s)	545, 763
Hin1II	CATG	2 cut(s)	634, 849
Hin6I	GCGC	2 cut(s)	543, 761
HinP1I	GCGC	2 cut(s)	543, 761
HincII	GTYRAC	1 cut(s)	502
HindII	GTYRAC	1 cut(s)	502
HindIII	AAGCTT	2 cut(s)	272, 377
HinfI	GANTC	5 cut(s)	160, 166, 179, 453, 568
HpaII	CCGG	6 cut(s)	65, 70, 197, 386, 656, 765
HphI	GGTGA	2 cut(s)	455, 571
Hpy166II	GTNNAC	2 cut(s)	255, 502
Hpy188I	TCNGA	3 cut(s)	150, 165, 184
Hpy188III	TCNNGA	5 cut(s)	268, 278, 386, 461, 599
Hpy8I	GTNNAC	2 cut(s)	255, 502
HpyAV	CCTTC	4 cut(s)	71, 365, 422, 772
HpyCH4III	ACNGT	1 cut(s)	213
HpyCH4V	TGCA	7 cut(s)	32, 106, 404, 487, 649, 689, 845
HpyF10VI	GCNNNNNNNGC	3 cut(s)	57, 95, 271
HpyF3I	CTNAG	5 cut(s)	11, 36, 99, 492, 608
Hsp92II	CATG	2 cut(s)	634, 849
HspAI	GCGC	2 cut(s)	543, 761
KflI	GGGWCCC	1 cut(s)	193
Kpn2I	TCCGGA	1 cut(s)	385
KspI	CCGCGG	1 cut(s)	52
Kzo9I	GATC	3 cut(s)	83, 145, 396
LguI	GCTCTTC	1 cut(s)	340
LmnI	GCTCC	2 cut(s)	319, 590
Lsp1109I	GCAGC	4 cut(s)	79, 90, 745, 778
LweI	GCATC	2 cut(s)	41, 676
MaeI	CTAG	1 cut(s)	572
MalI	GATC	3 cut(s)	85, 147, 398
MboI	GATC	3 cut(s)	83, 145, 396
MboII	GAAGA	7 cut(s)	143, 152, 155, 327, 437, 722, 819
MhlI	GDGCHC	2 cut(s)	305, 324
MluCI	AATT	3 cut(s)	468, 507, 532
MlyI	GAGTC	1 cut(s)	173
MmeI	TCCRAC	3 cut(s)	156, 402, 687
MroI	TCCGGA	1 cut(s)	385
MslI	CAYNNNNRTG	3 cut(s)	296, 629, 813
MspA1I	CMGCKG	2 cut(s)	51, 103
MspI	CCGG	6 cut(s)	65, 70, 197, 386, 656, 765
MspR9I	CCNGG	6 cut(s)	70, 197, 198, 317, 765, 775
Mva1269I	GAATGC	1 cut(s)	489
MvaI	CCWGG	2 cut(s)	317, 775
MvnI	CGCG	2 cut(s)	51, 545
MwoI	GCNNNNNNNGC	3 cut(s)	57, 95, 271
NciI	CCSGG	4 cut(s)	70, 197, 198, 765
NdeII	GATC	3 cut(s)	83, 145, 396
NlaIII	CATG	2 cut(s)	634, 849
NlaIV	GGNNCC	3 cut(s)	194, 195, 304
NmeAIII	GCCGAG	1 cut(s)	36
PciSI	GCTCTTC	1 cut(s)	340
PctI	GAATGC	1 cut(s)	489
PfeI	GAWTC	4 cut(s)	160, 166, 453, 568
PflMI	CCANNNNNTGG	1 cut(s)	511
PkrI	GCNGC	9 cut(s)	17, 50, 53, 91, 94, 97, 105, 760, 793
PleI	GAGTC	1 cut(s)	173
PpsI	GAGTC	1 cut(s)	173
PpuMI	RGGWCCY	1 cut(s)	193
Psp124BI	GAGCTC	1 cut(s)	324
Psp5II	RGGWCCY	1 cut(s)	193
Psp6I	CCWGG	2 cut(s)	315, 773
PspGI	CCWGG	2 cut(s)	315, 773
PspN4I	GGNNCC	3 cut(s)	194, 195, 304
PspPI	GGNCC	2 cut(s)	67, 193
PspPPI	RGGWCCY	1 cut(s)	193
PstI	CTGCAG	2 cut(s)	108, 651
PvuII	CAGCTG	1 cut(s)	103
RsaI	GTAC	3 cut(s)	9, 110, 254
RsaNI	GTAC	3 cut(s)	8, 109, 253
RseI	CAYNNNNRTG	3 cut(s)	296, 629, 813
SacI	GAGCTC	1 cut(s)	324
SacII	CCGCGG	1 cut(s)	52
SapI	GCTCTTC	1 cut(s)	340
SatI	GCNGC	9 cut(s)	16, 49, 52, 90, 93, 96, 104, 759, 792
Sau3AI	GATC	3 cut(s)	83, 145, 396
Sau96I	GGNCC	2 cut(s)	67, 193
SchI	GAGTC	1 cut(s)	173
ScrFI	CCNGG	6 cut(s)	70, 197, 198, 317, 765, 775
SduI	GDGCHC	2 cut(s)	305, 324
SfaNI	GCATC	2 cut(s)	41, 676
SfcI	CTRYAG	4 cut(s)	104, 436, 647, 718
Sfr303I	CCGCGG	1 cut(s)	52
SgrBI	CCGCGG	1 cut(s)	52
SinI	GGWCC	1 cut(s)	193
SmaI	CCCGGG	1 cut(s)	198
SmiMI	CAYNNNNRTG	3 cut(s)	296, 629, 813
SmlI	CTYRAG	1 cut(s)	613
SmoI	CTYRAG	1 cut(s)	613
Sse9I	AATT	3 cut(s)	468, 507, 532
SsiI	CCGC	7 cut(s)	16, 49, 51, 89, 95, 287, 313
SspMI	CTAG	1 cut(s)	572
SstI	GAGCTC	1 cut(s)	324
StyD4I	CCNGG	6 cut(s)	68, 195, 196, 315, 763, 773
TaaI	ACNGT	1 cut(s)	213
TaqI	TCGA	4 cut(s)	169, 269, 475, 741
TasI	AATT	3 cut(s)	468, 507, 532
TatI	WGTACW	1 cut(s)	252
TauI	GCSGC	5 cut(s)	18, 51, 54, 92, 98
TfiI	GAWTC	4 cut(s)	160, 166, 453, 568
TscAI	CASTG	2 cut(s)	218, 685
TseI	GCWGC	4 cut(s)	92, 103, 758, 791
TspDTI	ATGAA	2 cut(s)	384, 445
TspGWI	ACGGA	2 cut(s)	96, 465
TspMI	CCCGGG	1 cut(s)	196
TspRI	CASTG	2 cut(s)	218, 685
Van91I	CCANNNNNTGG	1 cut(s)	511
VpaK11BI	GGWCC	1 cut(s)	193
XapI	RAATTY	2 cut(s)	468, 532
XmaI	CCCGGG	1 cut(s)	196
XspI	CTAG	1 cut(s)	572

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.