RLG00000004522

Adenylate kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0001981
Physical Location & Seq
Reverse (-)
59996372 .. 59997975
1604 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004522

Sequence Viewer

Length: 747 bp
ATGATCAAACTACGCCGTTTAATTTCCCCTGCCGTCGTAACCGCCGCGCCGCCTCTACTCCGTCTTCTACGGCTCACCCTGAGCCGACTCTCCTCCTCCTCCGCCGCCGCGGCTCAGCCGATTCTCGATTACGACTACTACCAGCTCGACCACGCGCCGCCACGCGATCAAGCTCCGTTGGCCGACGCGGCGGGCACGGTTCCCGTGAGAGGAGTGCAGTGGGCGTTCATAGGGAGCCCAATCGCCAAGAGGCACGTCTACGCCGAGAGAATCTCTAAGCTTCTTCAAGTTCGTCACATTTCCATGGCTACCCTCGTCCGTCAAGACCTTCACCCTCACTCCTCTCTCTACAACCAGATTGCGAATGCCGTGAATCGGGGGGAGATTGTGGCAGAGGAGGATATACTCTTAGGGTTGTTGTCAAAGAAATTGGAAGATGGATATTGGAGAGGAGAGAGTGGATTTATACTGGATGGAATTCCTCGTTCCAAGATCCAAGCTGAAATTCTTTCACAACTGGTTGAGATTGATCTAGTGGTGAATTTCAAATGCACAGAACATTGCTTGGTGAAACACGAAAGAGAAGCTGCCTGGAGGGAGAAACTCCAAATCTTTGCCGAGCAGAGTAAGCCACTAGAAGATTACTACAAGAAACTGGAAAAGCTTCTTGACTTTCAAGTCAGTAGTGCACCTGAGGAGACTTGGAAAGGGCTCTTGGCTACTCTGCATCTACACTCTTCACTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00730 ko01100 ko01110 ko01130 map00230 map00730 map01100 map01110 map01130
Pfam Domains
Protein Families
ADK

Protein Analysis

249

Amino Acids

27.91

Weight (kDa)

7.82

Isoelectric Point (pI)

50.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADK PF00406 77 - 219 7.7e-20 Adenylate kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 677
AccI GTMKAC 1 cut(s) 258
AccII CGCG 5 cut(s) 47, 110, 155, 165, 188
AclWI GGATC 1 cut(s) 487
AcoI YGGCCR 1 cut(s) 180
AcsI RAATTY 3 cut(s) 477, 504, 541
AfiI CCNNNNNNNGG 2 cut(s) 209, 375
AgsI TTSAA 3 cut(s) 287, 547, 677
AjiI CACGTC 1 cut(s) 256
AjnI CCWGG 1 cut(s) 590
AjuI GAANNNNNNNTTGG 4 cut(s) 489, 521, 698, 730
AluBI AGCT 6 cut(s) 145, 173, 280, 500, 587, 664
AluI AGCT 6 cut(s) 145, 173, 280, 500, 587, 664
Alw21I GWGCWC 1 cut(s) 691
Alw26I GTCTC 1 cut(s) 692
Alw44I GTGCAC 1 cut(s) 687
AlwI GGATC 1 cut(s) 487
AoxI GGCC 1 cut(s) 180
ApaLI GTGCAC 1 cut(s) 687
ApeKI GCWGC 1 cut(s) 587
ApoI RAATTY 3 cut(s) 477, 504, 541
Asp700I GAANNNNTTC 1 cut(s) 663
AspLEI GCGC 2 cut(s) 49, 157
AsuHPI GGTGA 4 cut(s) 67, 323, 550, 580
AxyI CCTNAGG 1 cut(s) 693
BaeGI GKGCMC 2 cut(s) 197, 691
BanII GRGCYC 2 cut(s) 239, 714
BbsI GAAGAC 1 cut(s) 56
Bbv12I GWGCWC 1 cut(s) 691
BbvI GCAGC 1 cut(s) 574
BccI CCATC 2 cut(s) 431, 467
BceAI ACGGC 3 cut(s) 17, 86, 353
BciT130I CCWGG 1 cut(s) 592
BclI TGATCA 1 cut(s) 3
BcoDI GTCTC 1 cut(s) 692
BfaI CTAG 2 cut(s) 533, 635
BfmI CTRYAG 1 cut(s) 743
BglI GCCNNNNNGGC 2 cut(s) 110, 188
BisI GCNGC 8 cut(s) 45, 50, 105, 108, 111, 158, 189, 588
BlpI GCTNAGC 1 cut(s) 114
BlsI GCNGC 8 cut(s) 46, 51, 106, 109, 112, 159, 190, 589
Bme1390I CCNGG 1 cut(s) 592
BmgBI CACGTC 1 cut(s) 256
BmiI GGNNCC 2 cut(s) 201, 236
BmrFI CCNGG 1 cut(s) 592
BmsI GCATC 1 cut(s) 736
BpiI GAAGAC 1 cut(s) 56
BplI GAGNNNNNCTC 2 cut(s) 257, 289
BpmI CTGGAG 1 cut(s) 613
Bpu10I CCTNAGC 1 cut(s) 80
Bpu1102I GCTNAGC 1 cut(s) 114
BsaJI CCNNGG 2 cut(s) 108, 303
BsaXI ACNNNNNCTCC 2 cut(s) 323, 353
Bsc4I CCNNNNNNNGG 2 cut(s) 209, 375
Bse1I ACTGG 3 cut(s) 474, 522, 660
Bse21I CCTNAGG 1 cut(s) 693
Bse3DI GCAATG 1 cut(s) 559
BseBI CCWGG 1 cut(s) 592
BseDI CCNNGG 2 cut(s) 108, 303
BseGI GGATG 1 cut(s) 478
BseLI CCNNNNNNNGG 2 cut(s) 209, 375
BseMI GCAATG 1 cut(s) 559
BseMII CTCAG 3 cut(s) 71, 128, 684
BseNI ACTGG 3 cut(s) 474, 522, 660
BseRI GAGGAG 8 cut(s) 82, 85, 88, 225, 331, 410, 465, 710
BseSI GKGCMC 2 cut(s) 197, 691
BseXI GCAGC 1 cut(s) 574
BsgI GTGCAG 1 cut(s) 236
Bsh1236I CGCG 5 cut(s) 47, 110, 155, 165, 188
BshFI GGCC 1 cut(s) 182
BsiHKAI GWGCWC 1 cut(s) 691
BslI CCNNNNNNNGG 2 cut(s) 209, 375
BsmAI GTCTC 1 cut(s) 692
BsmI GAATGC 1 cut(s) 370
BsnI GGCC 1 cut(s) 182
Bsp1286I GDGCHC 4 cut(s) 197, 239, 691, 714
Bsp143I GATC 4 cut(s) 3, 166, 492, 529
Bsp1720I GCTNAGC 1 cut(s) 114
Bsp19I CCATGG 1 cut(s) 303
BspANI GGCC 1 cut(s) 182
BspCNI CTCAG 3 cut(s) 72, 127, 685
BspFNI CGCG 5 cut(s) 47, 110, 155, 165, 188
BspLI GGNNCC 2 cut(s) 201, 236
BspPI GGATC 1 cut(s) 487
BsrDI GCAATG 1 cut(s) 559
BsrI ACTGG 3 cut(s) 474, 522, 660
BssECI CCNNGG 2 cut(s) 108, 303
BssMI GATC 4 cut(s) 3, 166, 492, 529
BssT1I CCWWGG 1 cut(s) 303
Bst2UI CCWGG 1 cut(s) 592
Bst4CI ACNGT 2 cut(s) 199, 744
Bst6I CTCTTC 1 cut(s) 742
BstC8I GCNNGC 1 cut(s) 193
BstDEI CTNAG 5 cut(s) 80, 114, 276, 409, 693
BstDSI CCRYGG 2 cut(s) 108, 303
BstF5I GGATG 1 cut(s) 478
BstFNI CGCG 5 cut(s) 47, 110, 155, 165, 188
BstHHI GCGC 2 cut(s) 49, 157
BstKTI GATC 4 cut(s) 6, 169, 495, 532
BstMAI GTCTC 1 cut(s) 692
BstMBI GATC 4 cut(s) 3, 166, 492, 529
BstMWI GCNNNNNNNGC 4 cut(s) 110, 179, 188, 628
BstNI CCWGG 1 cut(s) 592
BstSCI CCNGG 1 cut(s) 590
BstSFI CTRYAG 1 cut(s) 743
BstSLI GKGCMC 2 cut(s) 197, 691
BstUI CGCG 5 cut(s) 47, 110, 155, 165, 188
BstV1I GCAGC 1 cut(s) 574
BstV2I GAAGAC 1 cut(s) 56
BstX2I RGATCY 1 cut(s) 492
BstYI RGATCY 1 cut(s) 492
Bsu36I CCTNAGG 1 cut(s) 693
BsuRI GGCC 1 cut(s) 182
BtgI CCRYGG 2 cut(s) 108, 303
BtrI CACGTC 1 cut(s) 256
BtsCI GGATG 1 cut(s) 478
BtsI GCAGTG 1 cut(s) 224
BtsIMutI CAGTG 2 cut(s) 224, 740
Cac8I GCNNGC 1 cut(s) 193
CfoI GCGC 2 cut(s) 49, 157
Cfr42I CCGCGG 1 cut(s) 111
CseI GACGC 1 cut(s) 194
CviAII CATG 1 cut(s) 304
DdeI CTNAG 5 cut(s) 80, 114, 276, 409, 693
DpnI GATC 4 cut(s) 5, 168, 494, 531
DpnII GATC 4 cut(s) 3, 166, 492, 529
DrdI GACNNNNNNGTC 1 cut(s) 677
DseDI GACNNNNNNGTC 1 cut(s) 677
EaeI YGGCCR 1 cut(s) 180
Eam1104I CTCTTC 1 cut(s) 742
EarI CTCTTC 1 cut(s) 742
EciI GGCGGA 1 cut(s) 91
Eco130I CCWWGG 1 cut(s) 303
Eco24I GRGCYC 2 cut(s) 239, 714
Eco81I CCTNAGG 1 cut(s) 693
EcoRI GAATTC 1 cut(s) 477
EcoRII CCWGG 1 cut(s) 590
EcoT14I CCWWGG 1 cut(s) 303
EcoT38I GRGCYC 2 cut(s) 239, 714
ErhI CCWWGG 1 cut(s) 303
FaeI CATG 1 cut(s) 307
FaiI YATR 4 cut(s) 230, 305, 404, 467
FatI CATG 1 cut(s) 303
FauI CCCGC 1 cut(s) 184
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 258
Fnu4HI GCNGC 8 cut(s) 45, 50, 105, 108, 111, 158, 189, 588
FokI GGATG 1 cut(s) 485
FriOI GRGCYC 2 cut(s) 239, 714
Fsp4HI GCNGC 8 cut(s) 45, 50, 105, 108, 111, 158, 189, 588
FspBI CTAG 2 cut(s) 533, 635
GlaI GCGC 2 cut(s) 48, 156
GluI GCNGC 8 cut(s) 45, 50, 105, 108, 111, 158, 189, 588
GsuI CTGGAG 1 cut(s) 613
HaeIII GGCC 1 cut(s) 182
HgaI GACGC 1 cut(s) 194
HhaI GCGC 2 cut(s) 49, 157
Hin1II CATG 1 cut(s) 307
Hin6I GCGC 2 cut(s) 47, 155
HinP1I GCGC 2 cut(s) 47, 155
HindIII AAGCTT 2 cut(s) 278, 662
HinfI GANTC 4 cut(s) 87, 121, 270, 373
HphI GGTGA 4 cut(s) 67, 323, 550, 580
Hpy166II GTNNAC 2 cut(s) 259, 689
Hpy188III TCNNGA 3 cut(s) 125, 323, 668
Hpy8I GTNNAC 2 cut(s) 259, 689
Hpy99I CGWCG 2 cut(s) 38, 188
HpyAV CCTTC 1 cut(s) 338
HpyCH4III ACNGT 2 cut(s) 199, 744
HpyCH4IV ACGT 1 cut(s) 255
HpyCH4V TGCA 4 cut(s) 217, 552, 689, 727
HpyF10VI GCNNNNNNNGC 4 cut(s) 110, 179, 188, 628
HpyF3I CTNAG 5 cut(s) 80, 114, 276, 409, 693
HpySE526I ACGT 1 cut(s) 255
Hsp92II CATG 1 cut(s) 307
HspAI GCGC 2 cut(s) 47, 155
Ksp22I TGATCA 1 cut(s) 3
KspI CCGCGG 1 cut(s) 111
Kzo9I GATC 4 cut(s) 3, 166, 492, 529
LmnI GCTCC 2 cut(s) 178, 234
Lsp1109I GCAGC 1 cut(s) 574
LweI GCATC 1 cut(s) 736
MaeI CTAG 2 cut(s) 533, 635
MaeII ACGT 1 cut(s) 255
MaeIII GTNAC 2 cut(s) 37, 293
MalI GATC 4 cut(s) 5, 168, 494, 531
MboI GATC 4 cut(s) 3, 166, 492, 529
MboII GAAGA 5 cut(s) 56, 275, 446, 650, 729
MflI RGATCY 1 cut(s) 492
MhlI GDGCHC 4 cut(s) 197, 239, 691, 714
MluCI AATT 5 cut(s) 21, 428, 477, 504, 541
MlyI GAGTC 1 cut(s) 81
MroXI GAANNNNTTC 1 cut(s) 663
MseI TTAA 1 cut(s) 20
MslI CAYNNNNRTG 1 cut(s) 302
MspA1I CMGCKG 1 cut(s) 110
MspR9I CCNGG 1 cut(s) 592
Mva1269I GAATGC 1 cut(s) 370
MvaI CCWGG 1 cut(s) 592
MvnI CGCG 5 cut(s) 47, 110, 155, 165, 188
MwoI GCNNNNNNNGC 4 cut(s) 110, 179, 188, 628
NcoI CCATGG 1 cut(s) 303
NdeII GATC 4 cut(s) 3, 166, 492, 529
NlaIII CATG 1 cut(s) 307
NlaIV GGNNCC 2 cut(s) 201, 236
NmeAIII GCCGAG 2 cut(s) 289, 643
NmuCI GTSAC 1 cut(s) 293
PcsI WCGNNNNNNNCGW 1 cut(s) 261
PctI GAATGC 1 cut(s) 370
PdmI GAANNNNTTC 1 cut(s) 663
PfeI GAWTC 3 cut(s) 121, 270, 373
PkrI GCNGC 8 cut(s) 46, 51, 106, 109, 112, 159, 190, 589
PleI GAGTC 1 cut(s) 81
PpsI GAGTC 1 cut(s) 81
Psp6I CCWGG 1 cut(s) 590
PspGI CCWGG 1 cut(s) 590
PspN4I GGNNCC 2 cut(s) 201, 236
PsuI RGATCY 1 cut(s) 492
RseI CAYNNNNRTG 1 cut(s) 302
SacII CCGCGG 1 cut(s) 111
SaqAI TTAA 1 cut(s) 20
SatI GCNGC 8 cut(s) 45, 50, 105, 108, 111, 158, 189, 588
Sau3AI GATC 4 cut(s) 3, 166, 492, 529
SchI GAGTC 1 cut(s) 81
ScrFI CCNGG 1 cut(s) 592
SduI GDGCHC 4 cut(s) 197, 239, 691, 714
SetI ASST 9 cut(s) 147, 175, 258, 282, 330, 502, 589, 666, 694
SfaNI GCATC 1 cut(s) 736
SfcI CTRYAG 1 cut(s) 743
Sfr303I CCGCGG 1 cut(s) 111
SgrBI CCGCGG 1 cut(s) 111
SmiMI CAYNNNNRTG 1 cut(s) 302
Sse9I AATT 5 cut(s) 21, 428, 477, 504, 541
SspMI CTAG 2 cut(s) 533, 635
StyD4I CCNGG 1 cut(s) 590
StyI CCWWGG 1 cut(s) 303
TaaI ACNGT 2 cut(s) 199, 744
TaiI ACGT 1 cut(s) 258
TaqI TCGA 2 cut(s) 126, 147
TasI AATT 5 cut(s) 21, 428, 477, 504, 541
TauI GCSGC 7 cut(s) 47, 52, 107, 110, 113, 160, 191
TfiI GAWTC 3 cut(s) 121, 270, 373
Tru1I TTAA 1 cut(s) 20
Tru9I TTAA 1 cut(s) 20
TscAI CASTG 2 cut(s) 224, 747
TseFI GTSAC 1 cut(s) 293
TseI GCWGC 1 cut(s) 587
Tsp45I GTSAC 1 cut(s) 293
TspDTI ATGAA 1 cut(s) 217
TspGWI ACGGA 3 cut(s) 50, 165, 308
TspRI CASTG 2 cut(s) 224, 747
VneI GTGCAC 1 cut(s) 687
XapI RAATTY 3 cut(s) 477, 504, 541
XmiI GTMKAC 1 cut(s) 258
XmnI GAANNNNTTC 1 cut(s) 663
XspI CTAG 2 cut(s) 533, 635
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.