Rh6BG059000

Belongs to the adenylate kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0001981
Physical Location & Seq
Forward (+)
9381274 .. 9388869
7596 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG059000.1

Sequence Viewer

Length: 276 bp
ATGCTGGTCTTTGTGGCAATCCGTTACAGACTCTTTGCCGAGATAATGAAGAAACACCTCAGGTTTGGAGGTGCGAAGAAGCACGTGTACGCCGAGAGGCTCTCGAAGCTTCTGGAAGTTCCCCACATTTTCACCCTCGTCCGCCAGGAGCTCAACCCTCGCTCTTCTCTGTACAAGCAGATTGCGAATGCGGTGAATGACGGAAAGCTTGTTCAGGATGAAGTGATTTTTGCATTGTTGTCGGAAAAGGCTCGAGGAAGGATACTACAGAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00730 ko01100 ko01110 ko01130 map00230 map00730 map01100 map01110 map01130
Pfam Domains
Protein Families
ADK

Protein Analysis

91

Amino Acids

10.59

Weight (kDa)

10.38

Isoelectric Point (pI)

39.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 142, 191
AcvI CACGTG 1 cut(s) 85
AfaI GTAC 2 cut(s) 89, 173
AflIII ACRYGT 1 cut(s) 84
AjnI CCWGG 1 cut(s) 144
AloI GAACNNNNNNTCC 2 cut(s) 195, 227
AluBI AGCT 3 cut(s) 109, 151, 208
AluI AGCT 3 cut(s) 109, 151, 208
Alw21I GWGCWC 1 cut(s) 153
Ama87I CYCGRG 1 cut(s) 252
AsuHPI GGTGA 2 cut(s) 124, 205
AvaI CYCGRG 1 cut(s) 252
AxyI CCTNAGG 1 cut(s) 59
BanII GRGCYC 1 cut(s) 153
BarI GAAGNNNNNNTAC 2 cut(s) 71, 103
BbrPI CACGTG 1 cut(s) 85
Bbv12I GWGCWC 1 cut(s) 153
BcgI CGANNNNNNTGC 2 cut(s) 222, 256
BciT130I CCWGG 1 cut(s) 146
BciVI GTATCC 1 cut(s) 255
BfmI CTRYAG 1 cut(s) 266
BfuI GTATCC 1 cut(s) 255
Bme1390I CCNGG 1 cut(s) 146
BmeT110I CYCGRG 1 cut(s) 252
BmrFI CCNGG 1 cut(s) 146
BplI GAGNNNNNCTC 2 cut(s) 86, 118
BsaAI YACGTR 1 cut(s) 85
Bse21I CCTNAGG 1 cut(s) 59
BseBI CCWGG 1 cut(s) 146
BseGI GGATG 1 cut(s) 223
BseMII CTCAG 1 cut(s) 73
BsiHKAI GWGCWC 1 cut(s) 153
BsiHKCI CYCGRG 1 cut(s) 252
BsmI GAATGC 1 cut(s) 193
BsoBI CYCGRG 1 cut(s) 252
Bsp1286I GDGCHC 1 cut(s) 153
Bsp1407I TGTACA 1 cut(s) 171
BspACI CCGC 2 cut(s) 142, 191
BspCNI CTCAG 1 cut(s) 72
BspQI GCTCTTC 1 cut(s) 169
BsrGI TGTACA 1 cut(s) 171
Bst2UI CCWGG 1 cut(s) 146
Bst6I CTCTTC 1 cut(s) 169
BstAUI TGTACA 1 cut(s) 171
BstBAI YACGTR 1 cut(s) 85
BstDEI CTNAG 1 cut(s) 59
BstF5I GGATG 1 cut(s) 223
BstMWI GCNNNNNNNGC 1 cut(s) 106
BstNI CCWGG 1 cut(s) 146
BstSCI CCNGG 1 cut(s) 144
BstSFI CTRYAG 1 cut(s) 266
Bsu36I CCTNAGG 1 cut(s) 59
BsuI GTATCC 1 cut(s) 255
BtsCI GGATG 1 cut(s) 223
Csp6I GTAC 2 cut(s) 88, 172
CviJI RGCY 5 cut(s) 100, 109, 151, 208, 251
CviKI_1 RGCY 5 cut(s) 100, 109, 151, 208, 251
CviQI GTAC 2 cut(s) 88, 172
DdeI CTNAG 1 cut(s) 59
Eam1104I CTCTTC 1 cut(s) 169
EarI CTCTTC 1 cut(s) 169
EciI GGCGGA 1 cut(s) 131
Ecl136II GAGCTC 1 cut(s) 151
Eco24I GRGCYC 1 cut(s) 153
Eco53kI GAGCTC 1 cut(s) 151
Eco72I CACGTG 1 cut(s) 85
Eco81I CCTNAGG 1 cut(s) 59
Eco88I CYCGRG 1 cut(s) 252
EcoICRI GAGCTC 1 cut(s) 151
EcoRII CCWGG 1 cut(s) 144
EcoT38I GRGCYC 1 cut(s) 153
FokI GGATG 1 cut(s) 230
FriOI GRGCYC 1 cut(s) 153
HindIII AAGCTT 2 cut(s) 107, 206
HinfI GANTC 1 cut(s) 30
HphI GGTGA 2 cut(s) 124, 205
Hpy166II GTNNAC 1 cut(s) 88
Hpy188I TCNGA 1 cut(s) 244
Hpy188III TCNNGA 3 cut(s) 103, 113, 215
Hpy8I GTNNAC 1 cut(s) 88
HpyAV CCTTC 1 cut(s) 252
HpyCH4IV ACGT 1 cut(s) 84
HpyCH4V TGCA 1 cut(s) 233
HpyF10VI GCNNNNNNNGC 1 cut(s) 106
HpyF3I CTNAG 1 cut(s) 59
HpySE526I ACGT 1 cut(s) 84
LguI GCTCTTC 1 cut(s) 169
LmnI GCTCC 1 cut(s) 148
LpnPI CCDG 5 cut(s) 46, 98, 131, 158, 200
MaeII ACGT 1 cut(s) 84
MaeIII GTNAC 1 cut(s) 23
MboII GAAGA 3 cut(s) 61, 88, 156
MhlI GDGCHC 1 cut(s) 153
MlyI GAGTC 1 cut(s) 24
MmeI TCCRAC 1 cut(s) 222
MnlI CCTC 7 cut(s) 62, 68, 90, 146, 168, 248, 264
MspR9I CCNGG 1 cut(s) 146
Mva1269I GAATGC 1 cut(s) 193
MvaI CCWGG 1 cut(s) 146
MwoI GCNNNNNNNGC 1 cut(s) 106
NmeAIII GCCGAG 2 cut(s) 64, 118
PaeR7I CTCGAG 1 cut(s) 252
PciSI GCTCTTC 1 cut(s) 169
PcsI WCGNNNNNNNCGW 1 cut(s) 90
PctI GAATGC 1 cut(s) 193
PleI GAGTC 1 cut(s) 24
PmaCI CACGTG 1 cut(s) 85
PmlI CACGTG 1 cut(s) 85
PpsI GAGTC 1 cut(s) 24
Ppu21I YACGTR 1 cut(s) 85
Psp124BI GAGCTC 1 cut(s) 153
Psp6I CCWGG 1 cut(s) 144
PspCI CACGTG 1 cut(s) 85
PspGI CCWGG 1 cut(s) 144
PspXI VCTCGAGB 1 cut(s) 252
RsaI GTAC 2 cut(s) 89, 173
RsaNI GTAC 2 cut(s) 88, 172
SacI GAGCTC 1 cut(s) 153
SapI GCTCTTC 1 cut(s) 169
SchI GAGTC 1 cut(s) 24
ScrFI CCNGG 1 cut(s) 146
SduI GDGCHC 1 cut(s) 153
SetI ASST 8 cut(s) 60, 65, 73, 87, 111, 153, 210, 275
SfcI CTRYAG 1 cut(s) 266
Sfr274I CTCGAG 1 cut(s) 252
SlaI CTCGAG 1 cut(s) 252
SmlI CTYRAG 1 cut(s) 252
SmoI CTYRAG 1 cut(s) 252
SsiI CCGC 2 cut(s) 142, 191
SstI GAGCTC 1 cut(s) 153
StyD4I CCNGG 1 cut(s) 144
TaiI ACGT 1 cut(s) 87
TaqI TCGA 2 cut(s) 104, 253
TatI WGTACW 1 cut(s) 171
TspDTI ATGAA 2 cut(s) 62, 234
TspGWI ACGGA 2 cut(s) 11, 216
XhoI CTCGAG 1 cut(s) 252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.