Rh7AG111000

Adenylate kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0001981
Physical Location & Seq
Forward (+)
8733877 .. 8736134
2258 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG111000.1

Sequence Viewer

Length: 609 bp
ATGATCAAACTACGCCCTTTAATTTCCCCTGCCGCCGCCGTAACCGCCGCGCCGCCTCTCCTCCGTCTTCTGCGGCTCACCCTGAGCCGACTCTCCTCCGCCGCCGCGGCTCAGCCGATTCTCGATTACGACCACTACCAGCTCCACCACGCGCCGCCACGCGATCAAGCTCCGTTGGCCGACGCGGCGGGCTCGGTTCCCGTGAGGGGAGTGCGGTGGGCGTTCATAGGGAGCCCAATCGCCAAGAGGCACGTCTACGCCGAGAGAATCTCCAAGCTTCTTCAAATTCCTCACATTTCCATGGCCACCCTCGTCCGTCAAGACCTTCACCCTCACTCTTCTCTCTACAACCAGATTGCGAATGCCGTGAATCGGGGGGAGATTGTGGCGGAGGAGGATATACTATTAGGGTTGTTGTCAAAGAGATTGGAAGATGGATATTGGAGAGGAGAGAGTGGATTTATACTGGATGGAATTCCTCGTTCCAAGATCCAAGCTGAAATTCTTTCACAACTGGTTGAGATTGATCTAGTGGTGAATTTCAAATGCACAGAACATTGCTTGGTGAAACACAAAAGAGGTAATATCTATTATTTCATTGCAATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00730 ko01100 ko01110 ko01130 map00230 map00730 map01100 map01110 map01130
Pfam Domains
Protein Families
ADK

Protein Analysis

202

Amino Acids

22.47

Weight (kDa)

9.33

Isoelectric Point (pI)

58.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADK PF00406 76 - 190 7.7e-16 Adenylate kinase
AAA_17 PF13207 87 - 186 3.7e-06 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 255
AccII CGCG 5 cut(s) 50, 107, 152, 162, 185
AclWI GGATC 1 cut(s) 484
AcoI YGGCCR 2 cut(s) 177, 303
AcsI RAATTY 4 cut(s) 285, 474, 501, 538
AfiI CCNNNNNNNGG 2 cut(s) 206, 372
AgsI TTSAA 2 cut(s) 284, 544
AjiI CACGTC 1 cut(s) 253
AjuI GAANNNNNNNTTGG 2 cut(s) 486, 518
AluBI AGCT 4 cut(s) 142, 170, 277, 497
AluI AGCT 4 cut(s) 142, 170, 277, 497
AlwI GGATC 1 cut(s) 484
AoxI GGCC 2 cut(s) 177, 303
ApoI RAATTY 4 cut(s) 285, 474, 501, 538
AspLEI GCGC 2 cut(s) 52, 154
AsuHPI GGTGA 4 cut(s) 70, 320, 547, 577
BalI TGGCCA 1 cut(s) 305
BanII GRGCYC 2 cut(s) 194, 236
BbsI GAAGAC 1 cut(s) 59
BccI CCATC 2 cut(s) 428, 464
BceAI ACGGC 2 cut(s) 23, 350
BclI TGATCA 1 cut(s) 3
BfaI CTAG 1 cut(s) 530
BglI GCCNNNNNGGC 2 cut(s) 107, 185
BlpI GCTNAGC 1 cut(s) 111
BmgBI CACGTC 1 cut(s) 253
BmiI GGNNCC 2 cut(s) 198, 233
BpiI GAAGAC 1 cut(s) 59
BplI GAGNNNNNCTC 2 cut(s) 254, 286
Bpu10I CCTNAGC 1 cut(s) 83
Bpu1102I GCTNAGC 1 cut(s) 111
BsaJI CCNNGG 2 cut(s) 105, 300
Bsc4I CCNNNNNNNGG 2 cut(s) 206, 372
Bse1I ACTGG 2 cut(s) 471, 519
Bse3DI GCAATG 2 cut(s) 556, 597
BseDI CCNNGG 2 cut(s) 105, 300
BseGI GGATG 1 cut(s) 475
BseLI CCNNNNNNNGG 2 cut(s) 206, 372
BseMI GCAATG 2 cut(s) 556, 597
BseMII CTCAG 2 cut(s) 74, 125
BseNI ACTGG 2 cut(s) 471, 519
BseRI GAGGAG 4 cut(s) 50, 85, 407, 462
Bsh1236I CGCG 5 cut(s) 50, 107, 152, 162, 185
BshFI GGCC 2 cut(s) 179, 305
BslI CCNNNNNNNGG 2 cut(s) 206, 372
BsmI GAATGC 1 cut(s) 367
BsnI GGCC 2 cut(s) 179, 305
Bsp1286I GDGCHC 2 cut(s) 194, 236
Bsp143I GATC 4 cut(s) 3, 163, 489, 526
Bsp1720I GCTNAGC 1 cut(s) 111
Bsp19I CCATGG 1 cut(s) 300
BspANI GGCC 2 cut(s) 179, 305
BspCNI CTCAG 2 cut(s) 75, 124
BspFNI CGCG 5 cut(s) 50, 107, 152, 162, 185
BspLI GGNNCC 2 cut(s) 198, 233
BspPI GGATC 1 cut(s) 484
BsrDI GCAATG 2 cut(s) 556, 597
BsrI ACTGG 2 cut(s) 471, 519
BssECI CCNNGG 2 cut(s) 105, 300
BssMI GATC 4 cut(s) 3, 163, 489, 526
BssT1I CCWWGG 1 cut(s) 300
Bst6I CTCTTC 1 cut(s) 343
BstC8I GCNNGC 1 cut(s) 190
BstDEI CTNAG 2 cut(s) 83, 111
BstDSI CCRYGG 2 cut(s) 105, 300
BstF5I GGATG 1 cut(s) 475
BstFNI CGCG 5 cut(s) 50, 107, 152, 162, 185
BstHHI GCGC 2 cut(s) 52, 154
BstKTI GATC 4 cut(s) 6, 166, 492, 529
BstMBI GATC 4 cut(s) 3, 163, 489, 526
BstMWI GCNNNNNNNGC 4 cut(s) 44, 107, 176, 185
BstUI CGCG 5 cut(s) 50, 107, 152, 162, 185
BstV2I GAAGAC 1 cut(s) 59
BstX2I RGATCY 1 cut(s) 489
BstYI RGATCY 1 cut(s) 489
BsuRI GGCC 2 cut(s) 179, 305
BtgI CCRYGG 2 cut(s) 105, 300
BtrI CACGTC 1 cut(s) 253
BtsCI GGATG 1 cut(s) 475
Cac8I GCNNGC 1 cut(s) 190
CfoI GCGC 2 cut(s) 52, 154
Cfr42I CCGCGG 1 cut(s) 108
CseI GACGC 1 cut(s) 191
CviAII CATG 1 cut(s) 301
DdeI CTNAG 2 cut(s) 83, 111
DpnI GATC 4 cut(s) 5, 165, 491, 528
DpnII GATC 4 cut(s) 3, 163, 489, 526
EaeI YGGCCR 2 cut(s) 177, 303
Eam1104I CTCTTC 1 cut(s) 343
EarI CTCTTC 1 cut(s) 343
EciI GGCGGA 2 cut(s) 88, 404
Eco130I CCWWGG 1 cut(s) 300
Eco24I GRGCYC 2 cut(s) 194, 236
EcoRI GAATTC 1 cut(s) 474
EcoT14I CCWWGG 1 cut(s) 300
EcoT38I GRGCYC 2 cut(s) 194, 236
ErhI CCWWGG 1 cut(s) 300
FaeI CATG 1 cut(s) 304
FaiI YATR 4 cut(s) 227, 302, 401, 464
FatI CATG 1 cut(s) 300
FauI CCCGC 1 cut(s) 181
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 255
FokI GGATG 1 cut(s) 482
FriOI GRGCYC 2 cut(s) 194, 236
FspBI CTAG 1 cut(s) 530
GlaI GCGC 2 cut(s) 51, 153
HaeIII GGCC 2 cut(s) 179, 305
HgaI GACGC 1 cut(s) 191
HhaI GCGC 2 cut(s) 52, 154
Hin1II CATG 1 cut(s) 304
Hin6I GCGC 2 cut(s) 50, 152
HinP1I GCGC 2 cut(s) 50, 152
HindIII AAGCTT 1 cut(s) 275
HinfI GANTC 4 cut(s) 90, 118, 267, 370
HphI GGTGA 4 cut(s) 70, 320, 547, 577
Hpy166II GTNNAC 1 cut(s) 256
Hpy188III TCNNGA 2 cut(s) 122, 320
Hpy8I GTNNAC 1 cut(s) 256
Hpy99I CGWCG 1 cut(s) 185
HpyAV CCTTC 1 cut(s) 335
HpyCH4IV ACGT 1 cut(s) 252
HpyCH4V TGCA 2 cut(s) 549, 602
HpyF10VI GCNNNNNNNGC 4 cut(s) 44, 107, 176, 185
HpyF3I CTNAG 2 cut(s) 83, 111
HpySE526I ACGT 1 cut(s) 252
Hsp92II CATG 1 cut(s) 304
HspAI GCGC 2 cut(s) 50, 152
Ksp22I TGATCA 1 cut(s) 3
KspI CCGCGG 1 cut(s) 108
Kzo9I GATC 4 cut(s) 3, 163, 489, 526
LmnI GCTCC 3 cut(s) 147, 175, 231
LpnPI CCDG 6 cut(s) 42, 95, 152, 365, 452, 500
MaeI CTAG 1 cut(s) 530
MaeII ACGT 1 cut(s) 252
MaeIII GTNAC 1 cut(s) 40
MalI GATC 4 cut(s) 5, 165, 491, 528
MboI GATC 4 cut(s) 3, 163, 489, 526
MboII GAAGA 4 cut(s) 59, 272, 330, 443
MflI RGATCY 1 cut(s) 489
MhlI GDGCHC 2 cut(s) 194, 236
MlsI TGGCCA 1 cut(s) 305
MluCI AATT 5 cut(s) 21, 285, 474, 501, 538
MluNI TGGCCA 1 cut(s) 305
MlyI GAGTC 1 cut(s) 84
Mox20I TGGCCA 1 cut(s) 305
MscI TGGCCA 1 cut(s) 305
MseI TTAA 1 cut(s) 20
MslI CAYNNNNRTG 1 cut(s) 299
Msp20I TGGCCA 1 cut(s) 305
MspA1I CMGCKG 1 cut(s) 107
Mva1269I GAATGC 1 cut(s) 367
MvnI CGCG 5 cut(s) 50, 107, 152, 162, 185
MwoI GCNNNNNNNGC 4 cut(s) 44, 107, 176, 185
NcoI CCATGG 1 cut(s) 300
NdeII GATC 4 cut(s) 3, 163, 489, 526
NlaIII CATG 1 cut(s) 304
NlaIV GGNNCC 2 cut(s) 198, 233
NmeAIII GCCGAG 1 cut(s) 286
PcsI WCGNNNNNNNCGW 1 cut(s) 258
PctI GAATGC 1 cut(s) 367
PfeI GAWTC 3 cut(s) 118, 267, 370
PleI GAGTC 1 cut(s) 84
PpsI GAGTC 1 cut(s) 84
PspN4I GGNNCC 2 cut(s) 198, 233
PsuI RGATCY 1 cut(s) 489
RseI CAYNNNNRTG 1 cut(s) 299
SacII CCGCGG 1 cut(s) 108
SaqAI TTAA 1 cut(s) 20
Sau3AI GATC 4 cut(s) 3, 163, 489, 526
SchI GAGTC 1 cut(s) 84
SduI GDGCHC 2 cut(s) 194, 236
SetI ASST 7 cut(s) 144, 172, 255, 279, 327, 499, 583
Sfr303I CCGCGG 1 cut(s) 108
SgrBI CCGCGG 1 cut(s) 108
SmiMI CAYNNNNRTG 1 cut(s) 299
Sse9I AATT 5 cut(s) 21, 285, 474, 501, 538
SspMI CTAG 1 cut(s) 530
StyI CCWWGG 1 cut(s) 300
TaiI ACGT 1 cut(s) 255
TaqI TCGA 1 cut(s) 123
TasI AATT 5 cut(s) 21, 285, 474, 501, 538
TfiI GAWTC 3 cut(s) 118, 267, 370
Tru1I TTAA 1 cut(s) 20
Tru9I TTAA 1 cut(s) 20
TspDTI ATGAA 2 cut(s) 214, 586
TspGWI ACGGA 3 cut(s) 53, 162, 305
XapI RAATTY 4 cut(s) 285, 474, 501, 538
XmiI GTMKAC 1 cut(s) 255
XspI CTAG 1 cut(s) 530
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.