Rw7G009690

Adenylate kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0001981
Physical Location & Seq
Forward (+)
9029424 .. 9030876
1453 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G009690.1

Sequence Viewer

Length: 744 bp
ATGATCAAACTACGCCCTTTAATTTCCCCTGCCGCCGCCGCCGCGCCGCCTCTACTCCGTCTTCTGCGGCTCACCCTGAGCCGACTCTCCTCCTCCGCCGCCGCGGCTCAGCCGATTCTCGATTACGACTACTACCAGCTCCACCACGCGCTGCCGCCGCGCGATCAAGCTCCGTTGGCGGACGCGGCGGGCTCGGTTCCCGTGAGGGGAGTGCGGTGGGCGTTCATAGGGAGCCCAATGGCCAAGAGGCACGTCTACGCCGAGAGAATCTCCAAGCTTCTTCAAATTCCTCACATTTCCATGGCCACCCTCGTCCGTCAAGACCTTCACCCTCACTCCTCTCTCTACAACCAGATTGCGAATGCCGTGAATCGGGGGGAGATTGTGGCAGAGGAGGATATACTATTAGGGTTGTTGTCAAAGAGATTGGAAGATGGATATTGGAGAGGAGAGAGTGGATTTATACTGGATGGAATTCCTCGTTCCAAGATCCAAGCTGAAATTCTTTCACAACTGGTTGAGATTGATCTAGTGGTGAATTTCAAATGTACAGAACATTGCTTGGTGAAACACAAAAGAGAAGCTGCCTGGAGGGAGAAACTCCAAATCTTTGCCGAGCAGAGTAAGCCACTAGAAGATTACTACAAGAAAGAAGAAAAGCTTCTTGACTTTCAAGTCAGTAGTGCACCTGGGGAGACTTGGAAAGGGCTCTTGGCTACTCTGCATCTACACTCTTCACTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00730 ko01100 ko01110 ko01130 map00230 map00730 map01100 map01110 map01130
Pfam Domains
Protein Families
ADK

Protein Analysis

247

Amino Acids

27.7

Weight (kDa)

8.79

Isoelectric Point (pI)

54.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADK PF00406 76 - 219 2.2e-20 Adenylate kinase
AAA_17 PF13207 87 - 189 3.7e-06 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 674
AccI GTMKAC 1 cut(s) 255
AccII CGCG 6 cut(s) 44, 104, 149, 160, 162, 185
AclWI GGATC 1 cut(s) 484
AcoI YGGCCR 2 cut(s) 240, 303
AcsI RAATTY 4 cut(s) 285, 474, 501, 538
AfaI GTAC 1 cut(s) 550
AfiI CCNNNNNNNGG 2 cut(s) 206, 372
AgsI TTSAA 3 cut(s) 284, 544, 674
AjiI CACGTC 1 cut(s) 253
AjnI CCWGG 2 cut(s) 587, 688
AjuI GAANNNNNNNTTGG 4 cut(s) 486, 518, 695, 727
AluBI AGCT 6 cut(s) 139, 170, 277, 497, 584, 661
AluI AGCT 6 cut(s) 139, 170, 277, 497, 584, 661
Alw21I GWGCWC 1 cut(s) 688
Alw26I GTCTC 1 cut(s) 689
Alw44I GTGCAC 1 cut(s) 684
AlwI GGATC 1 cut(s) 484
AoxI GGCC 2 cut(s) 240, 303
ApaLI GTGCAC 1 cut(s) 684
ApeKI GCWGC 2 cut(s) 151, 584
ApoI RAATTY 4 cut(s) 285, 474, 501, 538
Asp700I GAANNNNTTC 1 cut(s) 660
AspLEI GCGC 3 cut(s) 46, 151, 162
AsuHPI GGTGA 4 cut(s) 64, 320, 547, 577
BaeGI GKGCMC 1 cut(s) 688
BalI TGGCCA 2 cut(s) 242, 305
BanII GRGCYC 3 cut(s) 194, 236, 711
BbsI GAAGAC 1 cut(s) 53
Bbv12I GWGCWC 1 cut(s) 688
BbvI GCAGC 2 cut(s) 138, 571
BccI CCATC 2 cut(s) 428, 464
BceAI ACGGC 1 cut(s) 350
BciT130I CCWGG 2 cut(s) 589, 690
BclI TGATCA 1 cut(s) 3
BcoDI GTCTC 1 cut(s) 689
BfaI CTAG 2 cut(s) 530, 632
BfmI CTRYAG 1 cut(s) 740
BglI GCCNNNNNGGC 1 cut(s) 104
BlpI GCTNAGC 1 cut(s) 108
Bme1390I CCNGG 2 cut(s) 589, 690
BmgBI CACGTC 1 cut(s) 253
BmiI GGNNCC 2 cut(s) 198, 233
BmrFI CCNGG 2 cut(s) 589, 690
BmsI GCATC 1 cut(s) 733
BpiI GAAGAC 1 cut(s) 53
BplI GAGNNNNNCTC 2 cut(s) 254, 286
BpmI CTGGAG 1 cut(s) 610
Bpu10I CCTNAGC 1 cut(s) 77
Bpu1102I GCTNAGC 1 cut(s) 108
BsaJI CCNNGG 3 cut(s) 102, 300, 689
BsaXI ACNNNNNCTCC 2 cut(s) 320, 350
Bsc4I CCNNNNNNNGG 2 cut(s) 206, 372
Bse1I ACTGG 2 cut(s) 471, 519
Bse3DI GCAATG 1 cut(s) 556
BseBI CCWGG 2 cut(s) 589, 690
BseDI CCNNGG 3 cut(s) 102, 300, 689
BseGI GGATG 1 cut(s) 475
BseLI CCNNNNNNNGG 2 cut(s) 206, 372
BseMI GCAATG 1 cut(s) 556
BseMII CTCAG 2 cut(s) 68, 122
BseNI ACTGG 2 cut(s) 471, 519
BseRI GAGGAG 5 cut(s) 79, 82, 328, 407, 462
BseSI GKGCMC 1 cut(s) 688
BseXI GCAGC 2 cut(s) 138, 571
Bsh1236I CGCG 6 cut(s) 44, 104, 149, 160, 162, 185
BshFI GGCC 2 cut(s) 242, 305
BsiHKAI GWGCWC 1 cut(s) 688
BslI CCNNNNNNNGG 2 cut(s) 206, 372
BsmAI GTCTC 1 cut(s) 689
BsmI GAATGC 1 cut(s) 367
BsnI GGCC 2 cut(s) 242, 305
Bsp1286I GDGCHC 4 cut(s) 194, 236, 688, 711
Bsp1407I TGTACA 1 cut(s) 548
Bsp143I GATC 4 cut(s) 3, 163, 489, 526
Bsp1720I GCTNAGC 1 cut(s) 108
Bsp19I CCATGG 1 cut(s) 300
BspANI GGCC 2 cut(s) 242, 305
BspCNI CTCAG 2 cut(s) 69, 121
BspFNI CGCG 6 cut(s) 44, 104, 149, 160, 162, 185
BspLI GGNNCC 2 cut(s) 198, 233
BspPI GGATC 1 cut(s) 484
BsrDI GCAATG 1 cut(s) 556
BsrGI TGTACA 1 cut(s) 548
BsrI ACTGG 2 cut(s) 471, 519
BssECI CCNNGG 3 cut(s) 102, 300, 689
BssMI GATC 4 cut(s) 3, 163, 489, 526
BssT1I CCWWGG 1 cut(s) 300
Bst2UI CCWGG 2 cut(s) 589, 690
Bst4CI ACNGT 1 cut(s) 741
Bst6I CTCTTC 1 cut(s) 739
BstAUI TGTACA 1 cut(s) 548
BstC8I GCNNGC 1 cut(s) 190
BstDEI CTNAG 2 cut(s) 77, 108
BstDSI CCRYGG 2 cut(s) 102, 300
BstF5I GGATG 1 cut(s) 475
BstFNI CGCG 6 cut(s) 44, 104, 149, 160, 162, 185
BstHHI GCGC 3 cut(s) 46, 151, 162
BstKTI GATC 4 cut(s) 6, 166, 492, 529
BstMAI GTCTC 1 cut(s) 689
BstMBI GATC 4 cut(s) 3, 163, 489, 526
BstMWI GCNNNNNNNGC 7 cut(s) 38, 41, 104, 157, 176, 185, 625
BstNI CCWGG 2 cut(s) 589, 690
BstSCI CCNGG 2 cut(s) 587, 688
BstSFI CTRYAG 1 cut(s) 740
BstSLI GKGCMC 1 cut(s) 688
BstUI CGCG 6 cut(s) 44, 104, 149, 160, 162, 185
BstV1I GCAGC 2 cut(s) 138, 571
BstV2I GAAGAC 1 cut(s) 53
BstX2I RGATCY 1 cut(s) 489
BstYI RGATCY 1 cut(s) 489
BsuRI GGCC 2 cut(s) 242, 305
BtgI CCRYGG 2 cut(s) 102, 300
BtrI CACGTC 1 cut(s) 253
BtsCI GGATG 1 cut(s) 475
BtsIMutI CAGTG 1 cut(s) 737
Cac8I GCNNGC 1 cut(s) 190
CfoI GCGC 3 cut(s) 46, 151, 162
Cfr42I CCGCGG 1 cut(s) 105
CseI GACGC 1 cut(s) 191
Csp6I GTAC 1 cut(s) 549
CviAII CATG 1 cut(s) 301
CviQI GTAC 1 cut(s) 549
DdeI CTNAG 2 cut(s) 77, 108
DpnI GATC 4 cut(s) 5, 165, 491, 528
DpnII GATC 4 cut(s) 3, 163, 489, 526
DrdI GACNNNNNNGTC 1 cut(s) 674
DseDI GACNNNNNNGTC 1 cut(s) 674
EaeI YGGCCR 2 cut(s) 240, 303
Eam1104I CTCTTC 1 cut(s) 739
EarI CTCTTC 1 cut(s) 739
EciI GGCGGA 2 cut(s) 85, 194
Eco130I CCWWGG 1 cut(s) 300
Eco24I GRGCYC 3 cut(s) 194, 236, 711
EcoRI GAATTC 1 cut(s) 474
EcoRII CCWGG 2 cut(s) 587, 688
EcoT14I CCWWGG 1 cut(s) 300
EcoT38I GRGCYC 3 cut(s) 194, 236, 711
ErhI CCWWGG 1 cut(s) 300
FaeI CATG 1 cut(s) 304
FaiI YATR 4 cut(s) 227, 302, 401, 464
FalI AAGNNNNNCTT 2 cut(s) 645, 677
FatI CATG 1 cut(s) 300
FauI CCCGC 1 cut(s) 181
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 255
FokI GGATG 1 cut(s) 482
FriOI GRGCYC 3 cut(s) 194, 236, 711
FspBI CTAG 2 cut(s) 530, 632
GlaI GCGC 3 cut(s) 45, 150, 161
GsuI CTGGAG 1 cut(s) 610
HaeIII GGCC 2 cut(s) 242, 305
HgaI GACGC 1 cut(s) 191
HhaI GCGC 3 cut(s) 46, 151, 162
Hin1II CATG 1 cut(s) 304
Hin6I GCGC 3 cut(s) 44, 149, 160
HinP1I GCGC 3 cut(s) 44, 149, 160
HindIII AAGCTT 2 cut(s) 275, 659
HinfI GANTC 4 cut(s) 84, 115, 267, 370
HphI GGTGA 4 cut(s) 64, 320, 547, 577
Hpy166II GTNNAC 2 cut(s) 256, 686
Hpy188III TCNNGA 3 cut(s) 119, 320, 665
Hpy8I GTNNAC 2 cut(s) 256, 686
HpyAV CCTTC 1 cut(s) 335
HpyCH4III ACNGT 1 cut(s) 741
HpyCH4IV ACGT 1 cut(s) 252
HpyCH4V TGCA 2 cut(s) 686, 724
HpyF10VI GCNNNNNNNGC 7 cut(s) 38, 41, 104, 157, 176, 185, 625
HpyF3I CTNAG 2 cut(s) 77, 108
HpySE526I ACGT 1 cut(s) 252
Hsp92II CATG 1 cut(s) 304
HspAI GCGC 3 cut(s) 44, 149, 160
Ksp22I TGATCA 1 cut(s) 3
KspI CCGCGG 1 cut(s) 105
Kzo9I GATC 4 cut(s) 3, 163, 489, 526
LmnI GCTCC 3 cut(s) 144, 175, 231
Lsp1109I GCAGC 2 cut(s) 138, 571
LweI GCATC 1 cut(s) 733
MaeI CTAG 2 cut(s) 530, 632
MaeII ACGT 1 cut(s) 252
MalI GATC 4 cut(s) 5, 165, 491, 528
MboI GATC 4 cut(s) 3, 163, 489, 526
MboII GAAGA 6 cut(s) 53, 272, 443, 647, 665, 726
MflI RGATCY 1 cut(s) 489
MhlI GDGCHC 4 cut(s) 194, 236, 688, 711
MlsI TGGCCA 2 cut(s) 242, 305
MluCI AATT 5 cut(s) 21, 285, 474, 501, 538
MluNI TGGCCA 2 cut(s) 242, 305
MlyI GAGTC 1 cut(s) 78
Mox20I TGGCCA 2 cut(s) 242, 305
MroXI GAANNNNTTC 1 cut(s) 660
MscI TGGCCA 2 cut(s) 242, 305
MseI TTAA 1 cut(s) 20
MslI CAYNNNNRTG 1 cut(s) 299
Msp20I TGGCCA 2 cut(s) 242, 305
MspA1I CMGCKG 1 cut(s) 104
MspR9I CCNGG 2 cut(s) 589, 690
Mva1269I GAATGC 1 cut(s) 367
MvaI CCWGG 2 cut(s) 589, 690
MvnI CGCG 6 cut(s) 44, 104, 149, 160, 162, 185
MwoI GCNNNNNNNGC 7 cut(s) 38, 41, 104, 157, 176, 185, 625
NcoI CCATGG 1 cut(s) 300
NdeII GATC 4 cut(s) 3, 163, 489, 526
NlaIII CATG 1 cut(s) 304
NlaIV GGNNCC 2 cut(s) 198, 233
NmeAIII GCCGAG 2 cut(s) 286, 640
PcsI WCGNNNNNNNCGW 1 cut(s) 258
PctI GAATGC 1 cut(s) 367
PdmI GAANNNNTTC 1 cut(s) 660
PfeI GAWTC 3 cut(s) 115, 267, 370
PleI GAGTC 1 cut(s) 78
PpsI GAGTC 1 cut(s) 78
Psp6I CCWGG 2 cut(s) 587, 688
PspGI CCWGG 2 cut(s) 587, 688
PspN4I GGNNCC 2 cut(s) 198, 233
PsuI RGATCY 1 cut(s) 489
RsaI GTAC 1 cut(s) 550
RsaNI GTAC 1 cut(s) 549
RseI CAYNNNNRTG 1 cut(s) 299
SacII CCGCGG 1 cut(s) 105
SaqAI TTAA 1 cut(s) 20
Sau3AI GATC 4 cut(s) 3, 163, 489, 526
SchI GAGTC 1 cut(s) 78
ScrFI CCNGG 2 cut(s) 589, 690
SduI GDGCHC 4 cut(s) 194, 236, 688, 711
SetI ASST 9 cut(s) 141, 172, 255, 279, 327, 499, 586, 663, 691
SfaNI GCATC 1 cut(s) 733
SfcI CTRYAG 1 cut(s) 740
Sfr303I CCGCGG 1 cut(s) 105
SgrBI CCGCGG 1 cut(s) 105
SmiMI CAYNNNNRTG 1 cut(s) 299
Sse9I AATT 5 cut(s) 21, 285, 474, 501, 538
SspMI CTAG 2 cut(s) 530, 632
StyD4I CCNGG 2 cut(s) 587, 688
StyI CCWWGG 1 cut(s) 300
TaaI ACNGT 1 cut(s) 741
TaiI ACGT 1 cut(s) 255
TaqI TCGA 1 cut(s) 120
TasI AATT 5 cut(s) 21, 285, 474, 501, 538
TatI WGTACW 1 cut(s) 548
TfiI GAWTC 3 cut(s) 115, 267, 370
Tru1I TTAA 1 cut(s) 20
Tru9I TTAA 1 cut(s) 20
TscAI CASTG 1 cut(s) 744
TseI GCWGC 2 cut(s) 151, 584
TspDTI ATGAA 1 cut(s) 214
TspGWI ACGGA 3 cut(s) 47, 162, 305
TspRI CASTG 1 cut(s) 744
VneI GTGCAC 1 cut(s) 684
XapI RAATTY 4 cut(s) 285, 474, 501, 538
XmiI GTMKAC 1 cut(s) 255
XmnI GAANNNNTTC 1 cut(s) 660
XspI CTAG 2 cut(s) 530, 632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.