RchiOBHm_Chr7g0190491

Adenylate kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0001981
Physical Location & Seq
Forward (+)
9563559 .. 9565760
2202 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17014

Sequence Viewer

Length: 750 bp
ATGATCAAACTACGCCCTTTAATTTCCCCTGCCGCCGCCACCGCCGCCGCGCCGCCTCTACTCCGTCTTCTGCGGCTCACCCTGAGCCGACTCTCCTCCTCCGCCGCCGCGGCTCAGCCGATTCTCGATTACGACTACTACTGCCAGCTCCACCACGCGCCGCCACGCGATCAAGCTCCGTTGGCGGACGCGGCGGGCTCGGTTCCCGTGAGGGGAGTGCGGTGGGCGTTCATAGGGAGCCCAATCGCCAAGAGGCACGTCTACGCCGAGAGAATCTCCAAGCTTCTTCAAATTCCTCACATTTCCATGGCCACCCTCGTCCGTCAAGACCTTCACCCTCACTCCTCTCTCTACAGCCAGATTGCGAATGCCGTGAATCGGGGGGAGATTGTGGCGGAGGAGGATATACTATTAGGGTTGTTGTCAAAGAGATTGGAAGATGGATATTGGAGAGGAGAGAGTGGATTTATACTGGATGGAATTCCTCGTTCCAAGATCCAAGCTGAAATTCTTTCACAACTGGTTGAGATTGATCTAGTGGTGAATTTCAAATGCACAGAACATTGCTTGGTGAAACACAAAAGAGAAGCTGCCTGGAGGGAGAAACTCCAAATCTTTGCGGAGCAGAGTAAGCCACTAGAAGATTACTACAAGAAAGAGGAAAAGCTTCTTGACTTTCAAGTCAGTAGTGCACCTGGGGAGACTTGGAAAGGGCTCTTGGCTACTCTGCATCTACACTCTTCACTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00730 ko01100 ko01110 ko01130 map00230 map00730 map01100 map01110 map01130
Pfam Domains
Protein Families
ADK

Protein Analysis

249

Amino Acids

27.82

Weight (kDa)

8.69

Isoelectric Point (pI)

54.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADK PF00406 78 - 221 3.6e-20 Adenylate kinase
AAA_17 PF13207 89 - 191 3.9e-06 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 680
AccI GTMKAC 1 cut(s) 261
AccII CGCG 5 cut(s) 50, 110, 158, 168, 191
AclWI GGATC 1 cut(s) 490
AcoI YGGCCR 1 cut(s) 309
AcsI RAATTY 4 cut(s) 291, 480, 507, 544
AfiI CCNNNNNNNGG 2 cut(s) 212, 378
AgsI TTSAA 3 cut(s) 290, 550, 680
AjiI CACGTC 1 cut(s) 259
AjnI CCWGG 2 cut(s) 593, 694
AjuI GAANNNNNNNTTGG 4 cut(s) 492, 524, 701, 733
AluBI AGCT 6 cut(s) 148, 176, 283, 503, 590, 667
AluI AGCT 6 cut(s) 148, 176, 283, 503, 590, 667
Alw21I GWGCWC 1 cut(s) 694
Alw26I GTCTC 1 cut(s) 695
Alw44I GTGCAC 1 cut(s) 690
AlwI GGATC 1 cut(s) 490
AoxI GGCC 1 cut(s) 309
ApaLI GTGCAC 1 cut(s) 690
ApeKI GCWGC 1 cut(s) 590
ApoI RAATTY 4 cut(s) 291, 480, 507, 544
Asp700I GAANNNNTTC 1 cut(s) 666
AspLEI GCGC 2 cut(s) 52, 160
AsuHPI GGTGA 4 cut(s) 70, 326, 553, 583
BaeGI GKGCMC 1 cut(s) 694
BalI TGGCCA 1 cut(s) 311
BanII GRGCYC 3 cut(s) 200, 242, 717
BbsI GAAGAC 1 cut(s) 59
Bbv12I GWGCWC 1 cut(s) 694
BbvI GCAGC 1 cut(s) 577
BccI CCATC 2 cut(s) 434, 470
BceAI ACGGC 1 cut(s) 356
BciT130I CCWGG 2 cut(s) 595, 696
BclI TGATCA 1 cut(s) 3
BcoDI GTCTC 1 cut(s) 695
BfaI CTAG 2 cut(s) 536, 638
BfmI CTRYAG 2 cut(s) 352, 746
BglI GCCNNNNNGGC 1 cut(s) 110
BlpI GCTNAGC 1 cut(s) 114
Bme1390I CCNGG 2 cut(s) 595, 696
BmgBI CACGTC 1 cut(s) 259
BmiI GGNNCC 2 cut(s) 204, 239
BmrFI CCNGG 2 cut(s) 595, 696
BmsI GCATC 1 cut(s) 739
BpiI GAAGAC 1 cut(s) 59
BplI GAGNNNNNCTC 2 cut(s) 260, 292
BpmI CTGGAG 1 cut(s) 616
Bpu10I CCTNAGC 1 cut(s) 83
Bpu1102I GCTNAGC 1 cut(s) 114
BsaJI CCNNGG 3 cut(s) 108, 306, 695
BsaXI ACNNNNNCTCC 2 cut(s) 326, 356
Bsc4I CCNNNNNNNGG 2 cut(s) 212, 378
Bse1I ACTGG 2 cut(s) 477, 525
Bse3DI GCAATG 1 cut(s) 562
BseBI CCWGG 2 cut(s) 595, 696
BseDI CCNNGG 3 cut(s) 108, 306, 695
BseGI GGATG 1 cut(s) 481
BseLI CCNNNNNNNGG 2 cut(s) 212, 378
BseMI GCAATG 1 cut(s) 562
BseMII CTCAG 2 cut(s) 74, 128
BseNI ACTGG 2 cut(s) 477, 525
BseRI GAGGAG 5 cut(s) 85, 88, 334, 413, 468
BseSI GKGCMC 1 cut(s) 694
BseXI GCAGC 1 cut(s) 577
Bsh1236I CGCG 5 cut(s) 50, 110, 158, 168, 191
BshFI GGCC 1 cut(s) 311
BsiHKAI GWGCWC 1 cut(s) 694
BslI CCNNNNNNNGG 2 cut(s) 212, 378
BsmAI GTCTC 1 cut(s) 695
BsmI GAATGC 1 cut(s) 373
BsnI GGCC 1 cut(s) 311
Bsp1286I GDGCHC 4 cut(s) 200, 242, 694, 717
Bsp143I GATC 4 cut(s) 3, 169, 495, 532
Bsp1720I GCTNAGC 1 cut(s) 114
Bsp19I CCATGG 1 cut(s) 306
BspANI GGCC 1 cut(s) 311
BspCNI CTCAG 2 cut(s) 75, 127
BspFNI CGCG 5 cut(s) 50, 110, 158, 168, 191
BspLI GGNNCC 2 cut(s) 204, 239
BspPI GGATC 1 cut(s) 490
BsrDI GCAATG 1 cut(s) 562
BsrI ACTGG 2 cut(s) 477, 525
BssECI CCNNGG 3 cut(s) 108, 306, 695
BssMI GATC 4 cut(s) 3, 169, 495, 532
BssT1I CCWWGG 1 cut(s) 306
Bst2UI CCWGG 2 cut(s) 595, 696
Bst4CI ACNGT 1 cut(s) 747
Bst6I CTCTTC 1 cut(s) 745
BstC8I GCNNGC 2 cut(s) 146, 196
BstDEI CTNAG 2 cut(s) 83, 114
BstDSI CCRYGG 2 cut(s) 108, 306
BstF5I GGATG 1 cut(s) 481
BstFNI CGCG 5 cut(s) 50, 110, 158, 168, 191
BstHHI GCGC 2 cut(s) 52, 160
BstKTI GATC 4 cut(s) 6, 172, 498, 535
BstMAI GTCTC 1 cut(s) 695
BstMBI GATC 4 cut(s) 3, 169, 495, 532
BstMWI GCNNNNNNNGC 6 cut(s) 41, 44, 110, 182, 191, 631
BstNI CCWGG 2 cut(s) 595, 696
BstSCI CCNGG 2 cut(s) 593, 694
BstSFI CTRYAG 2 cut(s) 352, 746
BstSLI GKGCMC 1 cut(s) 694
BstUI CGCG 5 cut(s) 50, 110, 158, 168, 191
BstV1I GCAGC 1 cut(s) 577
BstV2I GAAGAC 1 cut(s) 59
BstX2I RGATCY 1 cut(s) 495
BstYI RGATCY 1 cut(s) 495
BsuRI GGCC 1 cut(s) 311
BtgI CCRYGG 2 cut(s) 108, 306
BtrI CACGTC 1 cut(s) 259
BtsCI GGATG 1 cut(s) 481
BtsIMutI CAGTG 1 cut(s) 743
Cac8I GCNNGC 2 cut(s) 146, 196
CfoI GCGC 2 cut(s) 52, 160
Cfr42I CCGCGG 1 cut(s) 111
CseI GACGC 1 cut(s) 197
CviAII CATG 1 cut(s) 307
DdeI CTNAG 2 cut(s) 83, 114
DpnI GATC 4 cut(s) 5, 171, 497, 534
DpnII GATC 4 cut(s) 3, 169, 495, 532
DrdI GACNNNNNNGTC 1 cut(s) 680
DseDI GACNNNNNNGTC 1 cut(s) 680
EaeI YGGCCR 1 cut(s) 309
Eam1104I CTCTTC 1 cut(s) 745
EarI CTCTTC 1 cut(s) 745
EciI GGCGGA 3 cut(s) 91, 200, 410
Eco130I CCWWGG 1 cut(s) 306
Eco24I GRGCYC 3 cut(s) 200, 242, 717
EcoRI GAATTC 1 cut(s) 480
EcoRII CCWGG 2 cut(s) 593, 694
EcoT14I CCWWGG 1 cut(s) 306
EcoT38I GRGCYC 3 cut(s) 200, 242, 717
ErhI CCWWGG 1 cut(s) 306
FaeI CATG 1 cut(s) 310
FaiI YATR 4 cut(s) 233, 308, 407, 470
FatI CATG 1 cut(s) 306
FauI CCCGC 1 cut(s) 187
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 261
FokI GGATG 1 cut(s) 488
FriOI GRGCYC 3 cut(s) 200, 242, 717
FspBI CTAG 2 cut(s) 536, 638
GlaI GCGC 2 cut(s) 51, 159
GsuI CTGGAG 1 cut(s) 616
HaeIII GGCC 1 cut(s) 311
HgaI GACGC 1 cut(s) 197
HhaI GCGC 2 cut(s) 52, 160
Hin1II CATG 1 cut(s) 310
Hin6I GCGC 2 cut(s) 50, 158
HinP1I GCGC 2 cut(s) 50, 158
HindIII AAGCTT 2 cut(s) 281, 665
HinfI GANTC 4 cut(s) 90, 121, 273, 376
HphI GGTGA 4 cut(s) 70, 326, 553, 583
Hpy166II GTNNAC 2 cut(s) 262, 692
Hpy188III TCNNGA 3 cut(s) 125, 326, 671
Hpy8I GTNNAC 2 cut(s) 262, 692
HpyAV CCTTC 1 cut(s) 341
HpyCH4III ACNGT 1 cut(s) 747
HpyCH4IV ACGT 1 cut(s) 258
HpyCH4V TGCA 3 cut(s) 555, 692, 730
HpyF10VI GCNNNNNNNGC 6 cut(s) 41, 44, 110, 182, 191, 631
HpyF3I CTNAG 2 cut(s) 83, 114
HpySE526I ACGT 1 cut(s) 258
Hsp92II CATG 1 cut(s) 310
HspAI GCGC 2 cut(s) 50, 158
Ksp22I TGATCA 1 cut(s) 3
KspI CCGCGG 1 cut(s) 111
Kzo9I GATC 4 cut(s) 3, 169, 495, 532
LmnI GCTCC 4 cut(s) 153, 181, 237, 622
Lsp1109I GCAGC 1 cut(s) 577
LweI GCATC 1 cut(s) 739
MaeI CTAG 2 cut(s) 536, 638
MaeII ACGT 1 cut(s) 258
MalI GATC 4 cut(s) 5, 171, 497, 534
MboI GATC 4 cut(s) 3, 169, 495, 532
MboII GAAGA 5 cut(s) 59, 278, 449, 653, 732
MflI RGATCY 1 cut(s) 495
MhlI GDGCHC 4 cut(s) 200, 242, 694, 717
MlsI TGGCCA 1 cut(s) 311
MluCI AATT 5 cut(s) 21, 291, 480, 507, 544
MluNI TGGCCA 1 cut(s) 311
MlyI GAGTC 1 cut(s) 84
Mox20I TGGCCA 1 cut(s) 311
MroXI GAANNNNTTC 1 cut(s) 666
MscI TGGCCA 1 cut(s) 311
MseI TTAA 1 cut(s) 20
MslI CAYNNNNRTG 1 cut(s) 305
Msp20I TGGCCA 1 cut(s) 311
MspA1I CMGCKG 1 cut(s) 110
MspR9I CCNGG 2 cut(s) 595, 696
Mva1269I GAATGC 1 cut(s) 373
MvaI CCWGG 2 cut(s) 595, 696
MvnI CGCG 5 cut(s) 50, 110, 158, 168, 191
MwoI GCNNNNNNNGC 6 cut(s) 41, 44, 110, 182, 191, 631
NcoI CCATGG 1 cut(s) 306
NdeII GATC 4 cut(s) 3, 169, 495, 532
NlaIII CATG 1 cut(s) 310
NlaIV GGNNCC 2 cut(s) 204, 239
NmeAIII GCCGAG 1 cut(s) 292
PcsI WCGNNNNNNNCGW 1 cut(s) 264
PctI GAATGC 1 cut(s) 373
PdmI GAANNNNTTC 1 cut(s) 666
PfeI GAWTC 3 cut(s) 121, 273, 376
PleI GAGTC 1 cut(s) 84
PpsI GAGTC 1 cut(s) 84
Psp6I CCWGG 2 cut(s) 593, 694
PspGI CCWGG 2 cut(s) 593, 694
PspN4I GGNNCC 2 cut(s) 204, 239
PsuI RGATCY 1 cut(s) 495
RseI CAYNNNNRTG 1 cut(s) 305
SacII CCGCGG 1 cut(s) 111
SaqAI TTAA 1 cut(s) 20
Sau3AI GATC 4 cut(s) 3, 169, 495, 532
SchI GAGTC 1 cut(s) 84
ScrFI CCNGG 2 cut(s) 595, 696
SduI GDGCHC 4 cut(s) 200, 242, 694, 717
SetI ASST 9 cut(s) 150, 178, 261, 285, 333, 505, 592, 669, 697
SfaNI GCATC 1 cut(s) 739
SfcI CTRYAG 2 cut(s) 352, 746
Sfr303I CCGCGG 1 cut(s) 111
SgrBI CCGCGG 1 cut(s) 111
SmiMI CAYNNNNRTG 1 cut(s) 305
Sse9I AATT 5 cut(s) 21, 291, 480, 507, 544
SspMI CTAG 2 cut(s) 536, 638
StyD4I CCNGG 2 cut(s) 593, 694
StyI CCWWGG 1 cut(s) 306
TaaI ACNGT 1 cut(s) 747
TaiI ACGT 1 cut(s) 261
TaqI TCGA 1 cut(s) 126
TasI AATT 5 cut(s) 21, 291, 480, 507, 544
TfiI GAWTC 3 cut(s) 121, 273, 376
Tru1I TTAA 1 cut(s) 20
Tru9I TTAA 1 cut(s) 20
TscAI CASTG 1 cut(s) 750
TseI GCWGC 1 cut(s) 590
TspDTI ATGAA 1 cut(s) 220
TspGWI ACGGA 3 cut(s) 53, 168, 311
TspRI CASTG 1 cut(s) 750
VneI GTGCAC 1 cut(s) 690
XapI RAATTY 4 cut(s) 291, 480, 507, 544
XmiI GTMKAC 1 cut(s) 261
XmnI GAANNNNTTC 1 cut(s) 666
XspI CTAG 2 cut(s) 536, 638
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.