Rh7DG114800

Adenylate kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0001981
Physical Location & Seq
Forward (+)
9736938 .. 9739198
2261 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG114800.1

Sequence Viewer

Length: 603 bp
ATGATCAAACTACGCCCTTTAATTTCCCCTGCCGCCGCCGCGCCGCCTCTACTCCGTCTTCTGCGGCTCACCCTGAGCGGACTCTCCTCCTCCGCCGCCGCGGCTCAGCCGATTCTCGATTACGACTACTACCAGCTCCACCACGCGCCGCCGCGCGATCAAGCTCCGTTGGCGGACGCGGCGGGCTCGGATCCCGTGAGGGGAGTGCGGTGGGCGTTCATAGGGAGCCCAATCGCCAAGAGGCACGTCTACGCCGAGAGAATCTCCAAGCTTCTTCAAATTCCTCACATTTCCATGGCCACCCTCGTCCGTCAAGACCTTCACCCTCACTCCTCTCTCTACAACCAGATTGCGAATGCCGTGAATCGGGGGGAGATTGTGGCGGAGGAGGATATACTATTAGGGTTGTTGTCAAAGAGATTGGAAGATGGATATTGGAGAGGAGAGAGTGGATTTATACTGGATGGAATTCCTCGTTCCAAGATCCAAGCTGAAATTCTTTCACAACTGGTTGAGATTGATCTAGTGGTGAATTTCAAATGCACAGAACATTGCTTGGTGAAACACAAAAGAGGTAATATCTATTATTTCATTGCAATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00730 ko01100 ko01110 ko01130 map00230 map00730 map01100 map01110 map01130
Pfam Domains
Protein Families
ADK

Protein Analysis

200

Amino Acids

22.23

Weight (kDa)

8.89

Isoelectric Point (pI)

57.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADK PF00406 74 - 188 7.5e-16 Adenylate kinase
AAA_17 PF13207 85 - 184 3.6e-06 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 78
AccI GTMKAC 1 cut(s) 249
AccII CGCG 6 cut(s) 41, 101, 146, 154, 156, 179
AclWI GGATC 3 cut(s) 185, 198, 478
AcoI YGGCCR 1 cut(s) 297
AcsI RAATTY 4 cut(s) 279, 468, 495, 532
AfiI CCNNNNNNNGG 2 cut(s) 200, 366
AgsI TTSAA 2 cut(s) 278, 538
AjiI CACGTC 1 cut(s) 247
AjuI GAANNNNNNNTTGG 2 cut(s) 480, 512
AluBI AGCT 4 cut(s) 136, 164, 271, 491
AluI AGCT 4 cut(s) 136, 164, 271, 491
AlwI GGATC 3 cut(s) 185, 198, 478
AoxI GGCC 1 cut(s) 297
ApoI RAATTY 4 cut(s) 279, 468, 495, 532
AspLEI GCGC 3 cut(s) 43, 148, 156
AsuHPI GGTGA 4 cut(s) 61, 314, 541, 571
BalI TGGCCA 1 cut(s) 299
BamHI GGATCC 1 cut(s) 190
BanII GRGCYC 2 cut(s) 188, 230
BbsI GAAGAC 1 cut(s) 50
BccI CCATC 2 cut(s) 422, 458
BceAI ACGGC 1 cut(s) 344
BclI TGATCA 1 cut(s) 3
BfaI CTAG 1 cut(s) 524
BglI GCCNNNNNGGC 1 cut(s) 101
BlpI GCTNAGC 1 cut(s) 105
BmgBI CACGTC 1 cut(s) 247
BmiI GGNNCC 2 cut(s) 192, 227
BpiI GAAGAC 1 cut(s) 50
BplI GAGNNNNNCTC 2 cut(s) 248, 280
Bpu10I CCTNAGC 1 cut(s) 74
Bpu1102I GCTNAGC 1 cut(s) 105
BsaJI CCNNGG 2 cut(s) 99, 294
BsaXI ACNNNNNCTCC 2 cut(s) 314, 344
Bsc4I CCNNNNNNNGG 2 cut(s) 200, 366
Bse1I ACTGG 2 cut(s) 465, 513
Bse3DI GCAATG 2 cut(s) 550, 591
BseDI CCNNGG 2 cut(s) 99, 294
BseGI GGATG 1 cut(s) 469
BseLI CCNNNNNNNGG 2 cut(s) 200, 366
BseMI GCAATG 2 cut(s) 550, 591
BseMII CTCAG 2 cut(s) 65, 119
BseNI ACTGG 2 cut(s) 465, 513
BseRI GAGGAG 5 cut(s) 76, 79, 322, 401, 456
Bsh1236I CGCG 6 cut(s) 41, 101, 146, 154, 156, 179
BshFI GGCC 1 cut(s) 299
BslI CCNNNNNNNGG 2 cut(s) 200, 366
BsmI GAATGC 1 cut(s) 361
BsnI GGCC 1 cut(s) 299
Bsp1286I GDGCHC 2 cut(s) 188, 230
Bsp143I GATC 5 cut(s) 3, 157, 190, 483, 520
Bsp1720I GCTNAGC 1 cut(s) 105
Bsp19I CCATGG 1 cut(s) 294
BspANI GGCC 1 cut(s) 299
BspCNI CTCAG 2 cut(s) 66, 118
BspFNI CGCG 6 cut(s) 41, 101, 146, 154, 156, 179
BspLI GGNNCC 2 cut(s) 192, 227
BspPI GGATC 3 cut(s) 185, 198, 478
BsrBI CCGCTC 1 cut(s) 78
BsrDI GCAATG 2 cut(s) 550, 591
BsrI ACTGG 2 cut(s) 465, 513
BssECI CCNNGG 2 cut(s) 99, 294
BssMI GATC 5 cut(s) 3, 157, 190, 483, 520
BssT1I CCWWGG 1 cut(s) 294
BstC8I GCNNGC 1 cut(s) 184
BstDEI CTNAG 2 cut(s) 74, 105
BstDSI CCRYGG 2 cut(s) 99, 294
BstF5I GGATG 1 cut(s) 469
BstFNI CGCG 6 cut(s) 41, 101, 146, 154, 156, 179
BstHHI GCGC 3 cut(s) 43, 148, 156
BstKTI GATC 5 cut(s) 6, 160, 193, 486, 523
BstMBI GATC 5 cut(s) 3, 157, 190, 483, 520
BstMWI GCNNNNNNNGC 4 cut(s) 38, 101, 170, 179
BstUI CGCG 6 cut(s) 41, 101, 146, 154, 156, 179
BstV2I GAAGAC 1 cut(s) 50
BstX2I RGATCY 2 cut(s) 190, 483
BstYI RGATCY 2 cut(s) 190, 483
BsuRI GGCC 1 cut(s) 299
BtgI CCRYGG 2 cut(s) 99, 294
BtrI CACGTC 1 cut(s) 247
BtsCI GGATG 1 cut(s) 469
Cac8I GCNNGC 1 cut(s) 184
CfoI GCGC 3 cut(s) 43, 148, 156
Cfr42I CCGCGG 1 cut(s) 102
CseI GACGC 1 cut(s) 185
CviAII CATG 1 cut(s) 295
DdeI CTNAG 2 cut(s) 74, 105
DpnI GATC 5 cut(s) 5, 159, 192, 485, 522
DpnII GATC 5 cut(s) 3, 157, 190, 483, 520
EaeI YGGCCR 1 cut(s) 297
EciI GGCGGA 3 cut(s) 82, 188, 398
Eco130I CCWWGG 1 cut(s) 294
Eco24I GRGCYC 2 cut(s) 188, 230
EcoRI GAATTC 1 cut(s) 468
EcoT14I CCWWGG 1 cut(s) 294
EcoT38I GRGCYC 2 cut(s) 188, 230
ErhI CCWWGG 1 cut(s) 294
FaeI CATG 1 cut(s) 298
FaiI YATR 4 cut(s) 221, 296, 395, 458
FatI CATG 1 cut(s) 294
FauI CCCGC 1 cut(s) 175
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 249
FokI GGATG 1 cut(s) 476
FriOI GRGCYC 2 cut(s) 188, 230
FspBI CTAG 1 cut(s) 524
GlaI GCGC 3 cut(s) 42, 147, 155
HaeIII GGCC 1 cut(s) 299
HgaI GACGC 1 cut(s) 185
HhaI GCGC 3 cut(s) 43, 148, 156
Hin1II CATG 1 cut(s) 298
Hin6I GCGC 3 cut(s) 41, 146, 154
HinP1I GCGC 3 cut(s) 41, 146, 154
HindIII AAGCTT 1 cut(s) 269
HinfI GANTC 4 cut(s) 81, 112, 261, 364
HphI GGTGA 4 cut(s) 61, 314, 541, 571
Hpy166II GTNNAC 1 cut(s) 250
Hpy188I TCNGA 1 cut(s) 190
Hpy188III TCNNGA 2 cut(s) 116, 314
Hpy8I GTNNAC 1 cut(s) 250
HpyAV CCTTC 1 cut(s) 329
HpyCH4IV ACGT 1 cut(s) 246
HpyCH4V TGCA 2 cut(s) 543, 596
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 101, 170, 179
HpyF3I CTNAG 2 cut(s) 74, 105
HpySE526I ACGT 1 cut(s) 246
Hsp92II CATG 1 cut(s) 298
HspAI GCGC 3 cut(s) 41, 146, 154
Ksp22I TGATCA 1 cut(s) 3
KspI CCGCGG 1 cut(s) 102
Kzo9I GATC 5 cut(s) 3, 157, 190, 483, 520
LmnI GCTCC 3 cut(s) 141, 169, 225
LpnPI CCDG 6 cut(s) 42, 86, 146, 359, 446, 494
MaeI CTAG 1 cut(s) 524
MaeII ACGT 1 cut(s) 246
MalI GATC 5 cut(s) 5, 159, 192, 485, 522
MbiI CCGCTC 1 cut(s) 78
MboI GATC 5 cut(s) 3, 157, 190, 483, 520
MboII GAAGA 3 cut(s) 50, 266, 437
MflI RGATCY 2 cut(s) 190, 483
MhlI GDGCHC 2 cut(s) 188, 230
MlsI TGGCCA 1 cut(s) 299
MluCI AATT 5 cut(s) 21, 279, 468, 495, 532
MluNI TGGCCA 1 cut(s) 299
MlyI GAGTC 1 cut(s) 75
Mox20I TGGCCA 1 cut(s) 299
MscI TGGCCA 1 cut(s) 299
MseI TTAA 1 cut(s) 20
MslI CAYNNNNRTG 1 cut(s) 293
Msp20I TGGCCA 1 cut(s) 299
MspA1I CMGCKG 1 cut(s) 101
Mva1269I GAATGC 1 cut(s) 361
MvnI CGCG 6 cut(s) 41, 101, 146, 154, 156, 179
MwoI GCNNNNNNNGC 4 cut(s) 38, 101, 170, 179
NcoI CCATGG 1 cut(s) 294
NdeII GATC 5 cut(s) 3, 157, 190, 483, 520
NlaIII CATG 1 cut(s) 298
NlaIV GGNNCC 2 cut(s) 192, 227
NmeAIII GCCGAG 1 cut(s) 280
PcsI WCGNNNNNNNCGW 1 cut(s) 252
PctI GAATGC 1 cut(s) 361
PfeI GAWTC 3 cut(s) 112, 261, 364
PleI GAGTC 1 cut(s) 75
PpsI GAGTC 1 cut(s) 75
PspN4I GGNNCC 2 cut(s) 192, 227
PsuI RGATCY 2 cut(s) 190, 483
RseI CAYNNNNRTG 1 cut(s) 293
SacII CCGCGG 1 cut(s) 102
SaqAI TTAA 1 cut(s) 20
Sau3AI GATC 5 cut(s) 3, 157, 190, 483, 520
SchI GAGTC 1 cut(s) 75
SduI GDGCHC 2 cut(s) 188, 230
SetI ASST 7 cut(s) 138, 166, 249, 273, 321, 493, 577
Sfr303I CCGCGG 1 cut(s) 102
SgrBI CCGCGG 1 cut(s) 102
SmiMI CAYNNNNRTG 1 cut(s) 293
Sse9I AATT 5 cut(s) 21, 279, 468, 495, 532
SspMI CTAG 1 cut(s) 524
StyI CCWWGG 1 cut(s) 294
TaiI ACGT 1 cut(s) 249
TaqI TCGA 1 cut(s) 117
TasI AATT 5 cut(s) 21, 279, 468, 495, 532
TfiI GAWTC 3 cut(s) 112, 261, 364
Tru1I TTAA 1 cut(s) 20
Tru9I TTAA 1 cut(s) 20
TspDTI ATGAA 2 cut(s) 208, 580
TspGWI ACGGA 3 cut(s) 44, 156, 299
XapI RAATTY 4 cut(s) 279, 468, 495, 532
XmiI GTMKAC 1 cut(s) 249
XspI CTAG 1 cut(s) 524
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.