Rmu_sc0010806.1_g000001

Belongs to the adenylate kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010806.1
OG0001981
Physical Location & Seq
Forward (+)
200 .. 1893
1694 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010806.1_g000001.1.cds

Sequence Viewer

Length: 675 bp
atgaataatctcacagggataatccctgaaaagattgggaacttgaaatcgataggaacgatcttgatctttctgcgaacaaactttgggtttcattccacagatacggtttctttgacattcgtgactcatctaaaccctaaacacaacaacttgtccgggaaaatcccaacaagcaaccagttcaacagcctaatggatccatcaatttatcaaggcaatgctggtctttgtggcaatccgttacaaactctttgccgagataatgaagaaacacctcaggttccaagtgaagatggagaaggagatgatggtaaatctgaacaggtttggaggtgcgaagaagcacgtgtacgccgagaggctctcgaagcttctggaagttccccacattttcaccctcgtccgccaggagctcaaccctcgctcttctctgtacaagcaggctcgaggaaggatactacagaggtgaaaatggattcattcttgatgggattcctcaaactagaattcaagctattgagcaagttgttggaggattactacagaaaacagaacaaactcatcgattttcatgtgaaaggtgcccccggagaaacctggaaggggctgctggctgcattgcatctccagcatataaatgctgtcagttctttccagaagctaactgcatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00730 ko01100 ko01110 ko01130 map00230 map00730 map01100 map01110 map01130
Pfam Domains
Protein Families
ADK

Protein Analysis

224

Amino Acids

24.85

Weight (kDa)

7.09

Isoelectric Point (pI)

29.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 584
AciI CCGC 1 cut(s) 407
AclWI GGATC 2 cut(s) 194, 207
AcsI RAATTY 1 cut(s) 509
AcvI CACGTG 1 cut(s) 350
AfaI GTAC 2 cut(s) 354, 438
AfiI CCNNNNNNNGG 1 cut(s) 606
AflIII ACRYGT 1 cut(s) 349
AgsI TTSAA 3 cut(s) 46, 187, 514
AjnI CCWGG 2 cut(s) 409, 599
AluBI AGCT 4 cut(s) 374, 416, 517, 664
AluI AGCT 4 cut(s) 374, 416, 517, 664
Alw21I GWGCWC 1 cut(s) 418
AlwI GGATC 2 cut(s) 194, 207
Ama87I CYCGRG 1 cut(s) 448
ApeKI GCWGC 2 cut(s) 610, 617
ApoI RAATTY 1 cut(s) 509
AsuC2I CCSGG 2 cut(s) 160, 591
AsuHPI GGTGA 2 cut(s) 389, 481
AvaI CYCGRG 1 cut(s) 448
AxyI CCTNAGG 1 cut(s) 279
BaeGI GKGCMC 1 cut(s) 589
BamHI GGATCC 1 cut(s) 199
BanI GGYRCC 1 cut(s) 584
BanII GRGCYC 1 cut(s) 418
BarI GAAGNNNNNNTAC 2 cut(s) 336, 368
BbrPI CACGTG 1 cut(s) 350
Bbv12I GWGCWC 1 cut(s) 418
BbvI GCAGC 2 cut(s) 597, 604
BccI CCATC 4 cut(s) 211, 290, 305, 484
BciT130I CCWGG 2 cut(s) 411, 601
BciVI GTATCC 1 cut(s) 451
BcnI CCSGG 2 cut(s) 160, 591
BfaI CTAG 1 cut(s) 506
BfmI CTRYAG 2 cut(s) 462, 544
BfuI GTATCC 1 cut(s) 451
BisI GCNGC 2 cut(s) 611, 618
BlsI GCNGC 2 cut(s) 612, 619
Bme1390I CCNGG 4 cut(s) 160, 411, 591, 601
BmeT110I CYCGRG 1 cut(s) 448
BmiI GGNNCC 3 cut(s) 201, 285, 586
BmrFI CCNGG 4 cut(s) 160, 411, 591, 601
BmsI GCATC 1 cut(s) 634
BplI GAGNNNNNCTC 2 cut(s) 351, 383
BpmI CTGGAG 1 cut(s) 614
BpuMI CCSGG 2 cut(s) 160, 591
Bsa29I ATCGAT 2 cut(s) 50, 567
BsaAI YACGTR 1 cut(s) 350
BsaBI GATNNNNATC 1 cut(s) 65
BsaJI CCNNGG 1 cut(s) 589
Bsc4I CCNNNNNNNGG 1 cut(s) 606
Bse1I ACTGG 1 cut(s) 181
Bse21I CCTNAGG 1 cut(s) 279
Bse3DI GCAATG 2 cut(s) 226, 620
Bse8I GATNNNNATC 1 cut(s) 65
BseBI CCWGG 2 cut(s) 411, 601
BseCI ATCGAT 2 cut(s) 50, 567
BseDI CCNNGG 1 cut(s) 589
BseJI GATNNNNATC 1 cut(s) 65
BseLI CCNNNNNNNGG 1 cut(s) 606
BseMI GCAATG 2 cut(s) 226, 620
BseMII CTCAG 1 cut(s) 293
BseNI ACTGG 1 cut(s) 181
BseSI GKGCMC 1 cut(s) 589
BseXI GCAGC 2 cut(s) 597, 604
BshNI GGYRCC 1 cut(s) 584
BshVI ATCGAT 2 cut(s) 50, 567
BsiHKAI GWGCWC 1 cut(s) 418
BsiHKCI CYCGRG 1 cut(s) 448
BsiSI CCGG 2 cut(s) 159, 591
BslI CCNNNNNNNGG 1 cut(s) 606
BsoBI CYCGRG 1 cut(s) 448
Bsp1286I GDGCHC 2 cut(s) 418, 589
Bsp1407I TGTACA 1 cut(s) 436
Bsp143I GATC 3 cut(s) 60, 66, 199
BspACI CCGC 1 cut(s) 407
BspCNI CTCAG 1 cut(s) 292
BspDI ATCGAT 2 cut(s) 50, 567
BspLI GGNNCC 3 cut(s) 201, 285, 586
BspPI GGATC 2 cut(s) 194, 207
BspQI GCTCTTC 1 cut(s) 434
BspT107I GGYRCC 1 cut(s) 584
BsrDI GCAATG 2 cut(s) 226, 620
BsrGI TGTACA 1 cut(s) 436
BsrI ACTGG 1 cut(s) 181
BssECI CCNNGG 1 cut(s) 589
BssMI GATC 3 cut(s) 60, 66, 199
Bst2UI CCWGG 2 cut(s) 411, 601
Bst4CI ACNGT 1 cut(s) 109
Bst6I CTCTTC 1 cut(s) 434
BstAUI TGTACA 1 cut(s) 436
BstBAI YACGTR 1 cut(s) 350
BstC8I GCNNGC 2 cut(s) 445, 615
BstDEI CTNAG 1 cut(s) 279
BstKTI GATC 3 cut(s) 63, 69, 202
BstMBI GATC 3 cut(s) 60, 66, 199
BstMWI GCNNNNNNNGC 2 cut(s) 371, 631
BstNI CCWGG 2 cut(s) 411, 601
BstSCI CCNGG 4 cut(s) 158, 409, 589, 599
BstSFI CTRYAG 2 cut(s) 462, 544
BstSLI GKGCMC 1 cut(s) 589
BstV1I GCAGC 2 cut(s) 597, 604
BstX2I RGATCY 1 cut(s) 199
BstYI RGATCY 1 cut(s) 199
Bsu15I ATCGAT 2 cut(s) 50, 567
Bsu36I CCTNAGG 1 cut(s) 279
BsuI GTATCC 1 cut(s) 451
BsuTUI ATCGAT 2 cut(s) 50, 567
Cac8I GCNNGC 2 cut(s) 445, 615
ClaI ATCGAT 2 cut(s) 50, 567
Csp6I GTAC 2 cut(s) 353, 437
CviAII CATG 2 cut(s) 575, 672
CviJI RGCY 9 cut(s) 192, 365, 374, 416, 447, 517, 610, 617, 664
CviKI_1 RGCY 9 cut(s) 192, 365, 374, 416, 447, 517, 610, 617, 664
CviQI GTAC 2 cut(s) 353, 437
DdeI CTNAG 1 cut(s) 279
DpnI GATC 3 cut(s) 62, 68, 201
DpnII GATC 3 cut(s) 60, 66, 199
Eam1104I CTCTTC 1 cut(s) 434
EarI CTCTTC 1 cut(s) 434
EciI GGCGGA 1 cut(s) 396
Ecl136II GAGCTC 1 cut(s) 416
Eco24I GRGCYC 1 cut(s) 418
Eco53kI GAGCTC 1 cut(s) 416
Eco72I CACGTG 1 cut(s) 350
Eco81I CCTNAGG 1 cut(s) 279
Eco88I CYCGRG 1 cut(s) 448
EcoICRI GAGCTC 1 cut(s) 416
EcoRI GAATTC 1 cut(s) 509
EcoRII CCWGG 2 cut(s) 409, 599
EcoT38I GRGCYC 1 cut(s) 418
FaeI CATG 2 cut(s) 578, 675
FaiI YATR 4 cut(s) 576, 636, 638, 673
FatI CATG 2 cut(s) 574, 671
Fnu4HI GCNGC 2 cut(s) 611, 618
FriOI GRGCYC 1 cut(s) 418
Fsp4HI GCNGC 2 cut(s) 611, 618
FspBI CTAG 1 cut(s) 506
GluI GCNGC 2 cut(s) 611, 618
GsuI CTGGAG 1 cut(s) 614
HapII CCGG 2 cut(s) 159, 591
Hin1II CATG 2 cut(s) 578, 675
HindIII AAGCTT 1 cut(s) 372
HinfI GANTC 3 cut(s) 127, 479, 495
HpaII CCGG 2 cut(s) 159, 591
HphI GGTGA 2 cut(s) 389, 481
Hpy166II GTNNAC 1 cut(s) 353
Hpy188I TCNGA 1 cut(s) 322
Hpy188III TCNNGA 6 cut(s) 64, 124, 368, 378, 487, 658
Hpy8I GTNNAC 1 cut(s) 353
HpyAV CCTTC 3 cut(s) 296, 448, 598
HpyCH4III ACNGT 1 cut(s) 109
HpyCH4IV ACGT 1 cut(s) 349
HpyCH4V TGCA 3 cut(s) 620, 625, 671
HpyF10VI GCNNNNNNNGC 2 cut(s) 371, 631
HpyF3I CTNAG 1 cut(s) 279
HpySE526I ACGT 1 cut(s) 349
Hsp92II CATG 2 cut(s) 578, 675
Kzo9I GATC 3 cut(s) 60, 66, 199
LguI GCTCTTC 1 cut(s) 434
LmnI GCTCC 1 cut(s) 413
Lsp1109I GCAGC 2 cut(s) 597, 604
LweI GCATC 1 cut(s) 634
MaeI CTAG 1 cut(s) 506
MaeII ACGT 1 cut(s) 349
MaeIII GTNAC 2 cut(s) 124, 243
MalI GATC 3 cut(s) 62, 68, 201
MboI GATC 3 cut(s) 60, 66, 199
MboII GAAGA 4 cut(s) 281, 305, 353, 421
MflI RGATCY 1 cut(s) 199
MhlI GDGCHC 2 cut(s) 418, 589
MluCI AATT 2 cut(s) 207, 509
MlyI GAGTC 1 cut(s) 121
MmeI TCCRAC 1 cut(s) 513
MnlI CCTC 9 cut(s) 288, 327, 355, 411, 433, 444, 460, 509, 529
MslI CAYNNNNRTG 1 cut(s) 639
MspI CCGG 2 cut(s) 159, 591
MspR9I CCNGG 4 cut(s) 160, 411, 591, 601
MvaI CCWGG 2 cut(s) 411, 601
MwoI GCNNNNNNNGC 2 cut(s) 371, 631
NciI CCSGG 2 cut(s) 160, 591
NdeII GATC 3 cut(s) 60, 66, 199
NlaIII CATG 2 cut(s) 578, 675
NlaIV GGNNCC 3 cut(s) 201, 285, 586
NmeAIII GCCGAG 2 cut(s) 284, 383
NmuCI GTSAC 1 cut(s) 124
PaeR7I CTCGAG 1 cut(s) 448
PciSI GCTCTTC 1 cut(s) 434
PcsI WCGNNNNNNNCGW 2 cut(s) 56, 355
PfeI GAWTC 2 cut(s) 479, 495
PfoI TCCNGGA 1 cut(s) 158
PkrI GCNGC 2 cut(s) 612, 619
PleI GAGTC 1 cut(s) 121
PmaCI CACGTG 1 cut(s) 350
PmlI CACGTG 1 cut(s) 350
PpsI GAGTC 1 cut(s) 121
Ppu21I YACGTR 1 cut(s) 350
Psp124BI GAGCTC 1 cut(s) 418
Psp6I CCWGG 2 cut(s) 409, 599
PspCI CACGTG 1 cut(s) 350
PspGI CCWGG 2 cut(s) 409, 599
PspN4I GGNNCC 3 cut(s) 201, 285, 586
PspXI VCTCGAGB 1 cut(s) 448
PsuI RGATCY 1 cut(s) 199
RsaI GTAC 2 cut(s) 354, 438
RsaNI GTAC 2 cut(s) 353, 437
RseI CAYNNNNRTG 1 cut(s) 639
SacI GAGCTC 1 cut(s) 418
SapI GCTCTTC 1 cut(s) 434
SatI GCNGC 2 cut(s) 611, 618
Sau3AI GATC 3 cut(s) 60, 66, 199
SchI GAGTC 1 cut(s) 121
ScrFI CCNGG 4 cut(s) 160, 411, 591, 601
SduI GDGCHC 2 cut(s) 418, 589
SfaNI GCATC 1 cut(s) 634
SfcI CTRYAG 2 cut(s) 462, 544
Sfr274I CTCGAG 1 cut(s) 448
SlaI CTCGAG 1 cut(s) 448
SmiMI CAYNNNNRTG 1 cut(s) 639
SmlI CTYRAG 1 cut(s) 448
SmoI CTYRAG 1 cut(s) 448
Sse9I AATT 2 cut(s) 207, 509
SsiI CCGC 1 cut(s) 407
SspMI CTAG 1 cut(s) 506
SstI GAGCTC 1 cut(s) 418
StyD4I CCNGG 4 cut(s) 158, 409, 589, 599
TaaI ACNGT 1 cut(s) 109
TaiI ACGT 1 cut(s) 352
TaqI TCGA 4 cut(s) 50, 369, 449, 567
TasI AATT 2 cut(s) 207, 509
TatI WGTACW 1 cut(s) 436
TfiI GAWTC 2 cut(s) 479, 495
TseFI GTSAC 1 cut(s) 124
TseI GCWGC 2 cut(s) 610, 617
Tsp45I GTSAC 1 cut(s) 124
TspDTI ATGAA 5 cut(s) 17, 83, 282, 471, 563
TspGWI ACGGA 1 cut(s) 231
XapI RAATTY 1 cut(s) 509
XhoI CTCGAG 1 cut(s) 448
XspI CTAG 1 cut(s) 506
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.