Prupe.4G259000_v2.0.a1

Acts as a Mg(2 ) transporter. Can also transport other divalent cations such as Fe(2 ), Sr(2 ), Ba(2 ), Mn(2 ) and Co(2 ) but to a much less extent than Mg(2 )

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000984
Physical Location & Seq
Reverse (-)
18581768 .. 18588392
6625 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G259000.9

Sequence Viewer

Length: 1056 bp
ATGGGTTTCTCCAAAGACAATCTTAAAGGCTTTGTTTTGGCTTTGCTTTCAAGTGGGTTCATAGGGGCAAGCTTTATTATCAAGAAGAAAGGCCTCAGAAGAGCCGCAGCTGCTTCTGGGGTCAGAGCTGGTTATGGCGGGTACTCTTATCTCTTGGAGCCTCTGTGGTGGCTGGGCTTTATTACAATGATTGTTGGAGAGATTGCAAACTTTGTTGCCTATGCATTTGCTCCGGCAGTTCTTGTTACCCCTCTCGGTGCATTAAGTATAATTGTAAGTGCTGTGCTGGCTCATTTTATCTTGAAGGAGAGGTTGCACCGGCTTGGAGTTTTGGGCTGTGTAATGTGCATTGCCGGGTCGATCATTATTGTTATCCATGCACCAAAGGAGCATTCTATAACTTCAGTTCTTGAAATATGGAGTATGGCAACTCAGCCAGCGTTTTTGCTTTATGTGGGCTCAGTGGTTGTTCTGGTTTTCATACTAGTCTTCCATTTTGCACCACAATGTGGGCACACGAATGTTCTAGTTTTCACCGGCATTTGTTCATTGATGGGTTCTCTCTCGGTGATGAGTGTTAAAGCCCTAGGAACTGCTCTGAAATTAACTTTTGAGGGGAAGAATCAGTTAATCTATCCAGAGACGTGGTTTTTTATGTTGGTCGTAGCTACATGCGTCATCACTCAAATGAATTATTTGAATAAGGCGCTTGATACGTTCAATACTGCAGTCGTGTCCCCTATTTATTATGTCATGTTTACAACGCTGGCAATCATTGCGAGTGTCATAATGTTTAAGGATTGGGATGACCAAAGTGGGGGAGCCATCCTATCAGAAATATGTGGATTTATTGTTGTATTATGTGGGACCATCTTATTGCATTCAACAAAAGAATTTGAAAGAAGCTCTTCTTTTAGAGGTGGTAGCTATATGCCTGTGTCACCTTCATTATCTGCGCGACTTTGTAGTGGCGGGAATGGAGAATTAGAGAAACATGAAGAAGAAGATGGGTCACCTTCGGAGGAAATTTGCTTAAGAAGACAAGAATTGTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mg_trans_NIPA

Protein Analysis

352

Amino Acids

38.11

Weight (kDa)

7.06

Isoelectric Point (pI)

36.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 509
AccII CGCG 1 cut(s) 958
AciI CCGC 3 cut(s) 105, 138, 972
AcsI RAATTY 2 cut(s) 893, 1026
AcuI CTGAAG 1 cut(s) 387
AdeI CACNNNGTG 1 cut(s) 509
AfaI GTAC 2 cut(s) 143, 1052
AfiI CCNNNNNNNGG 2 cut(s) 509, 817
AflII CTTAAG 1 cut(s) 1033
AgsI TTSAA 7 cut(s) 51, 304, 413, 700, 721, 885, 899
AhlI ACTAGT 1 cut(s) 484
AjiI CACGTC 1 cut(s) 645
AjuI GAANNNNNNNTTGG 2 cut(s) 376, 408
AluBI AGCT 6 cut(s) 72, 110, 128, 668, 906, 927
AluI AGCT 6 cut(s) 72, 110, 128, 668, 906, 927
Alw26I GTCTC 1 cut(s) 635
AoxI GGCC 1 cut(s) 91
ApeKI GCWGC 2 cut(s) 107, 110
ApoI RAATTY 2 cut(s) 893, 1026
Asp700I GAANNNNTTC 1 cut(s) 907
AspA2I CCTAGG 1 cut(s) 586
AspLEI GCGC 2 cut(s) 709, 958
AspS9I GGNCC 1 cut(s) 867
AsuC2I CCSGG 1 cut(s) 355
AsuHPI GGTGA 4 cut(s) 526, 580, 933, 1005
AvaII GGWCC 1 cut(s) 867
AvrII CCTAGG 1 cut(s) 586
BaeGI GKGCMC 1 cut(s) 516
BanII GRGCYC 1 cut(s) 461
BbsI GAAGAC 2 cut(s) 481, 1045
BbvI GCAGC 2 cut(s) 97, 119
BccI CCATC 4 cut(s) 547, 833, 878, 1001
BcnI CCSGG 1 cut(s) 355
BcoDI GTCTC 1 cut(s) 635
BcuI ACTAGT 1 cut(s) 484
BfaI CTAG 4 cut(s) 485, 527, 587, 1054
BfmI CTRYAG 1 cut(s) 726
BfoI RGCGCY 1 cut(s) 710
BfrI CTTAAG 1 cut(s) 1033
BisI GCNGC 3 cut(s) 105, 108, 111
BlnI CCTAGG 1 cut(s) 586
BlsI GCNGC 3 cut(s) 106, 109, 112
Bme1390I CCNGG 1 cut(s) 355
Bme18I GGWCC 1 cut(s) 867
BmgBI CACGTC 1 cut(s) 645
BmgT120I GGNCC 1 cut(s) 867
BmiI GGNNCC 3 cut(s) 159, 823, 868
BmrFI CCNGG 1 cut(s) 355
BpiI GAAGAC 2 cut(s) 481, 1045
BpuMI CCSGG 1 cut(s) 355
BsaJI CCNNGG 1 cut(s) 586
BsaXI ACNNNNNCTCC 2 cut(s) 149, 179
Bsc4I CCNNNNNNNGG 2 cut(s) 509, 817
Bse118I RCCGGY 2 cut(s) 318, 536
Bse3DI GCAATG 2 cut(s) 348, 774
BseDI CCNNGG 1 cut(s) 586
BseGI GGATG 2 cut(s) 811, 825
BseLI CCNNNNNNNGG 2 cut(s) 509, 817
BseMI GCAATG 2 cut(s) 348, 774
BseMII CTCAG 3 cut(s) 109, 446, 474
BseSI GKGCMC 1 cut(s) 516
BseXI GCAGC 2 cut(s) 97, 119
BseYI CCCAGC 1 cut(s) 172
Bsh1236I CGCG 1 cut(s) 958
BshFI GGCC 1 cut(s) 93
BsiSI CCGG 4 cut(s) 233, 319, 354, 537
BslFI GGGAC 2 cut(s) 721, 880
BslI CCNNNNNNNGG 2 cut(s) 509, 817
BsmAI GTCTC 1 cut(s) 635
BsmBI CGTCTC 1 cut(s) 635
BsmFI GGGAC 2 cut(s) 721, 880
BsmI GAATGC 2 cut(s) 391, 880
BsnI GGCC 1 cut(s) 93
Bsp1286I GDGCHC 2 cut(s) 461, 516
Bsp143I GATC 1 cut(s) 360
BspACI CCGC 3 cut(s) 105, 138, 972
BspANI GGCC 1 cut(s) 93
BspCNI CTCAG 3 cut(s) 108, 445, 473
BspFNI CGCG 1 cut(s) 958
BspLI GGNNCC 3 cut(s) 159, 823, 868
BspMAI CTGCAG 1 cut(s) 730
BspQI GCTCTTC 2 cut(s) 94, 913
BspTI CTTAAG 1 cut(s) 1033
BsrDI GCAATG 2 cut(s) 348, 774
BsrFI RCCGGY 2 cut(s) 318, 536
BssAI RCCGGY 2 cut(s) 318, 536
BssECI CCNNGG 1 cut(s) 586
BssMI GATC 1 cut(s) 360
BssT1I CCWWGG 1 cut(s) 586
Bst6I CTCTTC 2 cut(s) 94, 913
BstAFI CTTAAG 1 cut(s) 1033
BstAPI GCANNNNNTGC 1 cut(s) 776
BstC8I GCNNGC 4 cut(s) 70, 288, 438, 768
BstDEI CTNAG 3 cut(s) 95, 432, 460
BstEII GGTNACC 1 cut(s) 1011
BstF5I GGATG 2 cut(s) 811, 825
BstFNI CGCG 1 cut(s) 958
BstH2I RGCGCY 1 cut(s) 710
BstHHI GCGC 2 cut(s) 709, 958
BstKTI GATC 1 cut(s) 363
BstMAI GTCTC 1 cut(s) 635
BstMBI GATC 1 cut(s) 360
BstMWI GCNNNNNNNGC 3 cut(s) 110, 287, 776
BstNSI RCATGY 1 cut(s) 675
BstPI GGTNACC 1 cut(s) 1011
BstSCI CCNGG 1 cut(s) 353
BstSFI CTRYAG 1 cut(s) 726
BstSLI GKGCMC 1 cut(s) 516
BstUI CGCG 1 cut(s) 958
BstV1I GCAGC 2 cut(s) 97, 119
BstV2I GAAGAC 2 cut(s) 481, 1045
BstXI CCANNNNNNTGG 1 cut(s) 645
BsuRI GGCC 1 cut(s) 93
BtrI CACGTC 1 cut(s) 645
BtsCI GGATG 2 cut(s) 811, 825
BtsIMutI CAGTG 1 cut(s) 468
Cac8I GCNNGC 4 cut(s) 70, 288, 438, 768
CfoI GCGC 2 cut(s) 709, 958
Cfr10I RCCGGY 2 cut(s) 318, 536
Cfr13I GGNCC 1 cut(s) 867
CseI GACGC 1 cut(s) 664
Csp6I GTAC 2 cut(s) 142, 1051
CviAII CATG 4 cut(s) 377, 672, 754, 995
CviQI GTAC 2 cut(s) 142, 1051
DdeI CTNAG 3 cut(s) 95, 432, 460
DpnI GATC 1 cut(s) 362
DpnII GATC 1 cut(s) 360
DraIII CACNNNGTG 1 cut(s) 509
Eam1104I CTCTTC 2 cut(s) 94, 913
EarI CTCTTC 2 cut(s) 94, 913
Eco130I CCWWGG 1 cut(s) 586
Eco147I AGGCCT 1 cut(s) 93
Eco24I GRGCYC 1 cut(s) 461
Eco47I GGWCC 1 cut(s) 867
Eco57I CTGAAG 1 cut(s) 387
Eco91I GGTNACC 1 cut(s) 1011
EcoO65I GGTNACC 1 cut(s) 1011
EcoT14I CCWWGG 1 cut(s) 586
EcoT22I ATGCAT 1 cut(s) 226
EcoT38I GRGCYC 1 cut(s) 461
ErhI CCWWGG 1 cut(s) 586
Esp3I CGTCTC 1 cut(s) 635
FaeI CATG 4 cut(s) 380, 675, 757, 998
FalI AAGNNNNNCTT 5 cut(s) 38, 892, 924, 895, 927
FaqI GGGAC 2 cut(s) 721, 880
FatI CATG 4 cut(s) 376, 671, 753, 994
FauI CCCGC 2 cut(s) 131, 965
Fnu4HI GCNGC 3 cut(s) 105, 108, 111
FokI GGATG 2 cut(s) 812, 818
FriOI GRGCYC 1 cut(s) 461
Fsp4HI GCNGC 3 cut(s) 105, 108, 111
FspBI CTAG 4 cut(s) 485, 527, 587, 1054
GlaI GCGC 2 cut(s) 708, 957
GluI GCNGC 3 cut(s) 105, 108, 111
GsaI CCCAGC 1 cut(s) 176
HaeII RGCGCY 1 cut(s) 710
HaeIII GGCC 1 cut(s) 93
HapII CCGG 4 cut(s) 233, 319, 354, 537
HgaI GACGC 1 cut(s) 664
HhaI GCGC 2 cut(s) 709, 958
Hin1II CATG 4 cut(s) 380, 675, 757, 998
Hin6I GCGC 2 cut(s) 707, 956
HinP1I GCGC 2 cut(s) 707, 956
HindIII AAGCTT 1 cut(s) 70
HinfI GANTC 1 cut(s) 622
HpaII CCGG 4 cut(s) 233, 319, 354, 537
HphI GGTGA 4 cut(s) 526, 580, 933, 1005
Hpy166II GTNNAC 1 cut(s) 759
Hpy188I TCNGA 5 cut(s) 98, 125, 600, 835, 1021
Hpy188III TCNNGA 4 cut(s) 82, 301, 410, 638
Hpy8I GTNNAC 1 cut(s) 759
HpyAV CCTTC 3 cut(s) 298, 954, 1026
HpyCH4IV ACGT 2 cut(s) 644, 716
HpyCH4V TGCA 9 cut(s) 206, 224, 260, 316, 348, 380, 500, 728, 880
HpyF10VI GCNNNNNNNGC 3 cut(s) 110, 287, 776
HpyF3I CTNAG 3 cut(s) 95, 432, 460
HpySE526I ACGT 2 cut(s) 644, 716
Hsp92II CATG 4 cut(s) 380, 675, 757, 998
HspAI GCGC 2 cut(s) 707, 956
Kzo9I GATC 1 cut(s) 360
LguI GCTCTTC 2 cut(s) 94, 913
LmnI GCTCC 4 cut(s) 157, 235, 388, 821
Lsp1109I GCAGC 2 cut(s) 97, 119
MaeI CTAG 4 cut(s) 485, 527, 587, 1054
MaeII ACGT 2 cut(s) 644, 716
MaeIII GTNAC 3 cut(s) 244, 939, 1011
MalI GATC 1 cut(s) 362
MboI GATC 1 cut(s) 360
MboII GAAGA 9 cut(s) 97, 111, 481, 631, 900, 1010, 1013, 1016, 1050
MhlI GDGCHC 2 cut(s) 461, 516
MluCI AATT 7 cut(s) 270, 602, 691, 893, 983, 1026, 1046
MmeI TCCRAC 1 cut(s) 175
MnlI CCTC 7 cut(s) 104, 171, 261, 303, 607, 911, 1015
Mph1103I ATGCAT 1 cut(s) 226
MroXI GAANNNNTTC 1 cut(s) 907
MseI TTAA 7 cut(s) 24, 263, 579, 605, 629, 795, 1034
MslI CAYNNNNRTG 3 cut(s) 505, 519, 686
MspA1I CMGCKG 1 cut(s) 110
MspCI CTTAAG 1 cut(s) 1033
MspI CCGG 4 cut(s) 233, 319, 354, 537
MspR9I CCNGG 1 cut(s) 355
Mva1269I GAATGC 2 cut(s) 391, 880
MvnI CGCG 1 cut(s) 958
MwoI GCNNNNNNNGC 3 cut(s) 110, 287, 776
NciI CCSGG 1 cut(s) 355
NdeII GATC 1 cut(s) 360
NlaIII CATG 4 cut(s) 380, 675, 757, 998
NlaIV GGNNCC 3 cut(s) 159, 823, 868
NmuCI GTSAC 2 cut(s) 939, 1011
NsiI ATGCAT 1 cut(s) 226
NspI RCATGY 1 cut(s) 675
PceI AGGCCT 1 cut(s) 93
PciSI GCTCTTC 2 cut(s) 94, 913
PctI GAATGC 2 cut(s) 391, 880
PdmI GAANNNNTTC 1 cut(s) 907
PfeI GAWTC 1 cut(s) 622
PflMI CCANNNNNTGG 1 cut(s) 509
PkrI GCNGC 3 cut(s) 106, 109, 112
PspEI GGTNACC 1 cut(s) 1011
PspFI CCCAGC 1 cut(s) 172
PspN4I GGNNCC 3 cut(s) 159, 823, 868
PspPI GGNCC 1 cut(s) 867
PstI CTGCAG 1 cut(s) 730
PvuII CAGCTG 1 cut(s) 110
RsaI GTAC 2 cut(s) 143, 1052
RsaNI GTAC 2 cut(s) 142, 1051
RseI CAYNNNNRTG 3 cut(s) 505, 519, 686
SapI GCTCTTC 2 cut(s) 94, 913
SaqAI TTAA 7 cut(s) 24, 263, 579, 605, 629, 795, 1034
SatI GCNGC 3 cut(s) 105, 108, 111
Sau3AI GATC 1 cut(s) 360
Sau96I GGNCC 1 cut(s) 867
ScrFI CCNGG 1 cut(s) 355
SduI GDGCHC 2 cut(s) 461, 516
SfcI CTRYAG 1 cut(s) 726
SinI GGWCC 1 cut(s) 867
SmiMI CAYNNNNRTG 3 cut(s) 505, 519, 686
SmlI CTYRAG 1 cut(s) 1033
SmoI CTYRAG 1 cut(s) 1033
SpeI ACTAGT 1 cut(s) 484
Sse9I AATT 7 cut(s) 270, 602, 691, 893, 983, 1026, 1046
SseBI AGGCCT 1 cut(s) 93
SsiI CCGC 3 cut(s) 105, 138, 972
SspMI CTAG 4 cut(s) 485, 527, 587, 1054
StuI AGGCCT 1 cut(s) 93
StyD4I CCNGG 1 cut(s) 353
StyI CCWWGG 1 cut(s) 586
TaiI ACGT 2 cut(s) 647, 719
TaqI TCGA 1 cut(s) 359
TasI AATT 7 cut(s) 270, 602, 691, 893, 983, 1026, 1046
TatI WGTACW 1 cut(s) 1050
TauI GCSGC 1 cut(s) 107
TfiI GAWTC 1 cut(s) 622
Tru1I TTAA 7 cut(s) 24, 263, 579, 605, 629, 795, 1034
Tru9I TTAA 7 cut(s) 24, 263, 579, 605, 629, 795, 1034
TscAI CASTG 1 cut(s) 468
TseFI GTSAC 2 cut(s) 939, 1011
TseI GCWGC 2 cut(s) 107, 110
Tsp45I GTSAC 2 cut(s) 939, 1011
TspDTI ATGAA 6 cut(s) 49, 469, 537, 704, 936, 1011
TspRI CASTG 1 cut(s) 468
Van91I CCANNNNNTGG 1 cut(s) 509
Vha464I CTTAAG 1 cut(s) 1033
VpaK11BI GGWCC 1 cut(s) 867
XapI RAATTY 2 cut(s) 893, 1026
XceI RCATGY 1 cut(s) 675
XmaJI CCTAGG 1 cut(s) 586
XmnI GAANNNNTTC 1 cut(s) 907
XspI CTAG 4 cut(s) 485, 527, 587, 1054
Zsp2I ATGCAT 1 cut(s) 226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.