RLG00000018785

Acts as a Mg(2 ) transporter. Can also transport other divalent cations such as Fe(2 ), Sr(2 ), Ba(2 ), Mn(2 ) and Co(2 ) but to a much less extent than Mg(2 )

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000984
Physical Location & Seq
Forward (+)
36038440 .. 36042660
4221 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018785

Sequence Viewer

Length: 966 bp
ATGTCATCGAGCAATTTGAAAGGGTTCATATTGGCCGTGGTCTCTAGCGCCTTCATAGGGTCCAGCTTCATCATCAAGAAGAAGGGTCTCCGCCGAGCCGGCAACAATGGAACTCGTGCCGGTTCTGGAGGATATGGGTATCTGCGGGAGCCTCTATGGTGGATTGGAATGGTCACAATGGTTGTTGGAGAGATAGCAAATTTTGTAGCATACATATACGCACCTGCCGGGCTTGTCACGCCGCTTGGTGCTTTGAGTATCATTGTTAGTGCGGTGTTAGCGCATTTCCTGTTAAGGGAGAAACTCCAGAAAATGGGAATGTTGGGCTGCCTTTTATGCATAGTGGGTTCAGTTGTGATTGTACTCCATGCACCCGAAGAGCAGACTCTTACTTCCGTCCAACAAATCTGGGATTTAGCAATACAACCAGCTTTCCTTTTGTATACAGCCTCAGTGATAGCTGTAACGCTAGTGCTTATCTTGTATTGTTCCCCCCGCTATGGCCAAACCAATATACTGATTTATATAGGAATATGCTCAATTATTGGATCATTGACTGTCATGAGCATAAAAGCCATTGGCATTGCAATAAAACTCACAATAGAGGGCACAAACCAGGCAGTATACTTCCAAACATGGATTTTTGCAATGGTTGCAGTTACATGCATCATCACTCAATTAAATTATCTAAATATGGCATTGGACACTTTCAACACAGCAGTCGTTTCTCCCATCTATTATGCTATGTTCACATCTTTCACGATACTTGCGAGCGCAATAATGTTTAAGGATTATTCTGGTCAAAGTGCAAGCAGCATAGCTTCAGAATTTTGTGGATTCATCACTGTGTTATCTGGGACTGCTATATTGCATAGTACAAGAGAACCAGATCCACCTTTACTTACAGGTTTGCATCTAGTGTACCTTAGGCTGCATGACAGTTTAAAATTCATGTGCACTTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mg_trans_NIPA

Protein Analysis

322

Amino Acids

34.79

Weight (kDa)

8.78

Isoelectric Point (pI)

32.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mg_trans_NIPA PF05653 5 - 295 6.3e-132 Magnesium transporter NIPA
EamA PF00892 55 - 121 4.8e-07 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 232
Acc36I ACCTGC 1 cut(s) 232
AccB7I CCANNNNNTGG 1 cut(s) 313
AccI GTMKAC 2 cut(s) 443, 624
AciI CCGC 5 cut(s) 91, 145, 242, 272, 496
AclWI GGATC 2 cut(s) 556, 884
AcoI YGGCCR 2 cut(s) 33, 502
AcsI RAATTY 3 cut(s) 199, 827, 947
AcuI CTGAAG 1 cut(s) 807
AfaI GTAC 3 cut(s) 363, 877, 923
AfiI CCNNNNNNNGG 4 cut(s) 57, 295, 313, 500
AgsI TTSAA 2 cut(s) 19, 712
AjnI CCWGG 1 cut(s) 615
AluBI AGCT 4 cut(s) 66, 431, 461, 821
AluI AGCT 4 cut(s) 66, 431, 461, 821
Alw21I GWGCWC 1 cut(s) 959
Alw26I GTCTC 2 cut(s) 46, 92
Alw44I GTGCAC 1 cut(s) 955
AlwI GGATC 2 cut(s) 556, 884
AoxI GGCC 2 cut(s) 33, 502
ApaLI GTGCAC 1 cut(s) 955
ApeKI GCWGC 3 cut(s) 327, 813, 931
ApoI RAATTY 3 cut(s) 199, 827, 947
Asp700I GAANNNNTTC 1 cut(s) 23
AspLEI GCGC 3 cut(s) 50, 283, 776
AspS9I GGNCC 1 cut(s) 60
AsuC2I CCSGG 1 cut(s) 229
AvaII GGWCC 1 cut(s) 60
AxyI CCTNAGG 1 cut(s) 926
BaeGI GKGCMC 2 cut(s) 611, 959
BalI TGGCCA 1 cut(s) 504
BauI CACGAG 1 cut(s) 114
Bbv12I GWGCWC 1 cut(s) 959
BbvI GCAGC 3 cut(s) 314, 825, 918
BccI CCATC 1 cut(s) 740
BceAI ACGGC 1 cut(s) 20
BciT130I CCWGG 1 cut(s) 617
BcnI CCSGG 1 cut(s) 229
BcoDI GTCTC 2 cut(s) 46, 92
BfaI CTAG 3 cut(s) 45, 470, 917
BfoI RGCGCY 1 cut(s) 51
BfuAI ACCTGC 1 cut(s) 232
BglI GCCNNNNNGGC 1 cut(s) 99
BisI GCNGC 4 cut(s) 242, 328, 814, 932
BlsI GCNGC 4 cut(s) 243, 329, 815, 933
Bme1390I CCNGG 2 cut(s) 229, 617
Bme18I GGWCC 1 cut(s) 60
BmgT120I GGNCC 1 cut(s) 60
BmiI GGNNCC 2 cut(s) 61, 150
BmrFI CCNGG 2 cut(s) 229, 617
BmsI GCATC 2 cut(s) 675, 922
BpmI CTGGAG 2 cut(s) 147, 290
BpuMI CCSGG 1 cut(s) 229
BsaI GGTCTC 2 cut(s) 46, 92
BsaJI CCNNGG 1 cut(s) 36
Bsc4I CCNNNNNNNGG 4 cut(s) 57, 295, 313, 500
Bse118I RCCGGY 2 cut(s) 98, 119
Bse21I CCTNAGG 1 cut(s) 926
Bse3DI GCAATG 2 cut(s) 582, 654
BseBI CCWGG 1 cut(s) 617
BseDI CCNNGG 1 cut(s) 36
BseLI CCNNNNNNNGG 4 cut(s) 57, 295, 313, 500
BseMI GCAATG 2 cut(s) 582, 654
BseMII CTCAG 1 cut(s) 465
BseSI GKGCMC 2 cut(s) 611, 959
BseXI GCAGC 3 cut(s) 314, 825, 918
BshFI GGCC 2 cut(s) 35, 504
BsiHKAI GWGCWC 1 cut(s) 959
BsiSI CCGG 3 cut(s) 99, 120, 228
BslFI GGGAC 1 cut(s) 871
BslI CCNNNNNNNGG 4 cut(s) 57, 295, 313, 500
BsmAI GTCTC 2 cut(s) 46, 92
BsmFI GGGAC 1 cut(s) 871
BsnI GGCC 2 cut(s) 35, 504
Bso31I GGTCTC 2 cut(s) 46, 92
Bsp1286I GDGCHC 2 cut(s) 611, 959
Bsp143I GATC 2 cut(s) 548, 889
BspACI CCGC 5 cut(s) 91, 145, 242, 272, 496
BspANI GGCC 2 cut(s) 35, 504
BspCNI CTCAG 1 cut(s) 464
BspHI TCATGA 1 cut(s) 561
BspLI GGNNCC 2 cut(s) 61, 150
BspMI ACCTGC 1 cut(s) 232
BspPI GGATC 2 cut(s) 556, 884
BspQI GCTCTTC 1 cut(s) 372
BspTNI GGTCTC 2 cut(s) 46, 92
BsrDI GCAATG 2 cut(s) 582, 654
BsrFI RCCGGY 2 cut(s) 98, 119
BssAI RCCGGY 2 cut(s) 98, 119
BssECI CCNNGG 1 cut(s) 36
BssMI GATC 2 cut(s) 548, 889
BssNAI GTATAC 2 cut(s) 444, 625
BssSI CACGAG 1 cut(s) 114
Bst1107I GTATAC 2 cut(s) 444, 625
Bst2BI CACGAG 1 cut(s) 114
Bst2UI CCWGG 1 cut(s) 617
Bst4CI ACNGT 3 cut(s) 559, 847, 941
Bst6I CTCTTC 1 cut(s) 372
BstAPI GCANNNNNTGC 1 cut(s) 653
BstC8I GCNNGC 3 cut(s) 100, 772, 811
BstDEI CTNAG 2 cut(s) 451, 926
BstDSI CCRYGG 1 cut(s) 36
BstH2I RGCGCY 1 cut(s) 51
BstHHI GCGC 3 cut(s) 50, 283, 776
BstKTI GATC 2 cut(s) 551, 892
BstMAI GTCTC 2 cut(s) 46, 92
BstMBI GATC 2 cut(s) 548, 889
BstMWI GCNNNNNNNGC 5 cut(s) 99, 238, 278, 336, 653
BstNI CCWGG 1 cut(s) 617
BstNSI RCATGY 1 cut(s) 666
BstSCI CCNGG 2 cut(s) 227, 615
BstSLI GKGCMC 2 cut(s) 611, 959
BstV1I GCAGC 3 cut(s) 314, 825, 918
BstX2I RGATCY 1 cut(s) 889
BstYI RGATCY 1 cut(s) 889
BstZ17I GTATAC 2 cut(s) 444, 625
Bsu36I CCTNAGG 1 cut(s) 926
BsuRI GGCC 2 cut(s) 35, 504
BtgI CCRYGG 1 cut(s) 36
BtsIMutI CAGTG 2 cut(s) 459, 843
BveI ACCTGC 1 cut(s) 232
Cac8I GCNNGC 3 cut(s) 100, 772, 811
CciI TCATGA 1 cut(s) 561
CfoI GCGC 3 cut(s) 50, 283, 776
Cfr10I RCCGGY 2 cut(s) 98, 119
Cfr13I GGNCC 1 cut(s) 60
Csp6I GTAC 3 cut(s) 362, 876, 922
CviAII CATG 6 cut(s) 368, 562, 636, 663, 935, 952
CviQI GTAC 3 cut(s) 362, 876, 922
DdeI CTNAG 2 cut(s) 451, 926
DpnI GATC 2 cut(s) 550, 891
DpnII GATC 2 cut(s) 548, 889
DraI TTTAAA 1 cut(s) 945
EaeI YGGCCR 2 cut(s) 33, 502
Eam1104I CTCTTC 1 cut(s) 372
EarI CTCTTC 1 cut(s) 372
EciI GGCGGA 1 cut(s) 80
Eco31I GGTCTC 2 cut(s) 46, 92
Eco47I GGWCC 1 cut(s) 60
Eco57I CTGAAG 1 cut(s) 807
Eco81I CCTNAGG 1 cut(s) 926
EcoRII CCWGG 1 cut(s) 615
EcoT22I ATGCAT 2 cut(s) 341, 668
FaeI CATG 6 cut(s) 371, 565, 639, 666, 938, 955
FaqI GGGAC 1 cut(s) 871
FatI CATG 6 cut(s) 367, 561, 635, 662, 934, 951
FauI CCCGC 2 cut(s) 138, 503
FblI GTMKAC 2 cut(s) 443, 624
Fnu4HI GCNGC 4 cut(s) 242, 328, 814, 932
Fsp4HI GCNGC 4 cut(s) 242, 328, 814, 932
FspBI CTAG 3 cut(s) 45, 470, 917
GlaI GCGC 3 cut(s) 49, 282, 775
GluI GCNGC 4 cut(s) 242, 328, 814, 932
GsuI CTGGAG 2 cut(s) 147, 290
HaeII RGCGCY 1 cut(s) 51
HaeIII GGCC 2 cut(s) 35, 504
HapII CCGG 3 cut(s) 99, 120, 228
HhaI GCGC 3 cut(s) 50, 283, 776
Hin1II CATG 6 cut(s) 371, 565, 639, 666, 938, 955
Hin6I GCGC 3 cut(s) 48, 281, 774
HinP1I GCGC 3 cut(s) 48, 281, 774
HinfI GANTC 2 cut(s) 385, 837
HpaII CCGG 3 cut(s) 99, 120, 228
Hpy166II GTNNAC 5 cut(s) 444, 625, 750, 922, 957
Hpy188I TCNGA 1 cut(s) 826
Hpy188III TCNNGA 5 cut(s) 76, 126, 307, 562, 760
Hpy8I GTNNAC 5 cut(s) 444, 625, 750, 922, 957
HpyAV CCTTC 2 cut(s) 61, 76
HpyCH4III ACNGT 3 cut(s) 559, 847, 941
HpyF10VI GCNNNNNNNGC 5 cut(s) 99, 238, 278, 336, 653
HpyF3I CTNAG 2 cut(s) 451, 926
Hsp92II CATG 6 cut(s) 371, 565, 639, 666, 938, 955
HspAI GCGC 3 cut(s) 48, 281, 774
KroI GCCGGC 1 cut(s) 98
KroNI GCCGGC 1 cut(s) 100
Kzo9I GATC 2 cut(s) 548, 889
LguI GCTCTTC 1 cut(s) 372
LmnI GCTCC 1 cut(s) 148
Lsp1109I GCAGC 3 cut(s) 314, 825, 918
LweI GCATC 2 cut(s) 675, 922
MaeI CTAG 3 cut(s) 45, 470, 917
MaeIII GTNAC 4 cut(s) 172, 235, 463, 658
MalI GATC 2 cut(s) 550, 891
MboI GATC 2 cut(s) 548, 889
MboII GAAGA 2 cut(s) 91, 389
MflI RGATCY 1 cut(s) 889
MhlI GDGCHC 2 cut(s) 611, 959
MlsI TGGCCA 1 cut(s) 504
MluCI AATT 7 cut(s) 13, 199, 540, 677, 682, 827, 947
MluNI TGGCCA 1 cut(s) 504
MlyI GAGTC 1 cut(s) 379
MmeI TCCRAC 2 cut(s) 166, 424
MnlI CCTC 4 cut(s) 122, 162, 460, 598
Mox20I TGGCCA 1 cut(s) 504
Mph1103I ATGCAT 2 cut(s) 341, 668
MroNI GCCGGC 1 cut(s) 98
MroXI GAANNNNTTC 1 cut(s) 23
MscI TGGCCA 1 cut(s) 504
MseI TTAA 5 cut(s) 293, 680, 786, 944, 964
MslI CAYNNNNRTG 1 cut(s) 845
Msp20I TGGCCA 1 cut(s) 504
MspI CCGG 3 cut(s) 99, 120, 228
MspR9I CCNGG 2 cut(s) 229, 617
MvaI CCWGG 1 cut(s) 617
MwoI GCNNNNNNNGC 5 cut(s) 99, 238, 278, 336, 653
NaeI GCCGGC 1 cut(s) 100
NciI CCSGG 1 cut(s) 229
NdeII GATC 2 cut(s) 548, 889
NgoMIV GCCGGC 1 cut(s) 98
NlaIII CATG 6 cut(s) 371, 565, 639, 666, 938, 955
NlaIV GGNNCC 2 cut(s) 61, 150
NmeAIII GCCGAG 1 cut(s) 119
NmuCI GTSAC 2 cut(s) 172, 235
NsiI ATGCAT 2 cut(s) 341, 668
NspI RCATGY 1 cut(s) 666
PagI TCATGA 1 cut(s) 561
PaqCI CACCTGC 1 cut(s) 232
PciSI GCTCTTC 1 cut(s) 372
PcsI WCGNNNNNNNCGW 1 cut(s) 767
PdiI GCCGGC 1 cut(s) 100
PdmI GAANNNNTTC 1 cut(s) 23
PfeI GAWTC 1 cut(s) 837
PflMI CCANNNNNTGG 1 cut(s) 313
PkrI GCNGC 4 cut(s) 243, 329, 815, 933
PleI GAGTC 1 cut(s) 379
PpsI GAGTC 1 cut(s) 379
Psp6I CCWGG 1 cut(s) 615
PspGI CCWGG 1 cut(s) 615
PspN4I GGNNCC 2 cut(s) 61, 150
PspPI GGNCC 1 cut(s) 60
PsuI RGATCY 1 cut(s) 889
RsaI GTAC 3 cut(s) 363, 877, 923
RsaNI GTAC 3 cut(s) 362, 876, 922
RseI CAYNNNNRTG 1 cut(s) 845
SapI GCTCTTC 1 cut(s) 372
SaqAI TTAA 5 cut(s) 293, 680, 786, 944, 964
SatI GCNGC 4 cut(s) 242, 328, 814, 932
Sau3AI GATC 2 cut(s) 548, 889
Sau96I GGNCC 1 cut(s) 60
SchI GAGTC 1 cut(s) 379
ScrFI CCNGG 2 cut(s) 229, 617
SduI GDGCHC 2 cut(s) 611, 959
SetI ASST 8 cut(s) 68, 226, 433, 463, 823, 898, 910, 927
SfaNI GCATC 2 cut(s) 675, 922
SinI GGWCC 1 cut(s) 60
SmiMI CAYNNNNRTG 1 cut(s) 845
Sse9I AATT 7 cut(s) 13, 199, 540, 677, 682, 827, 947
SsiI CCGC 5 cut(s) 91, 145, 242, 272, 496
SspMI CTAG 3 cut(s) 45, 470, 917
StyD4I CCNGG 2 cut(s) 227, 615
TaaI ACNGT 3 cut(s) 559, 847, 941
TaqI TCGA 1 cut(s) 8
TasI AATT 7 cut(s) 13, 199, 540, 677, 682, 827, 947
TatI WGTACW 2 cut(s) 361, 875
TauI GCSGC 1 cut(s) 244
TfiI GAWTC 1 cut(s) 837
Tru1I TTAA 5 cut(s) 293, 680, 786, 944, 964
Tru9I TTAA 5 cut(s) 293, 680, 786, 944, 964
TscAI CASTG 2 cut(s) 459, 850
TseFI GTSAC 2 cut(s) 172, 235
TseI GCWGC 3 cut(s) 327, 813, 931
Tsp45I GTSAC 2 cut(s) 172, 235
TspDTI ATGAA 5 cut(s) 16, 43, 58, 829, 940
TspGWI ACGGA 1 cut(s) 385
TspRI CASTG 2 cut(s) 459, 850
Van91I CCANNNNNTGG 1 cut(s) 313
VneI GTGCAC 1 cut(s) 955
VpaK11BI GGWCC 1 cut(s) 60
XapI RAATTY 3 cut(s) 199, 827, 947
XceI RCATGY 1 cut(s) 666
XmiI GTMKAC 2 cut(s) 443, 624
XmnI GAANNNNTTC 1 cut(s) 23
XspI CTAG 3 cut(s) 45, 470, 917
Zsp2I ATGCAT 2 cut(s) 341, 668
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.