pycom10g10320

Acts as a Mg(2 ) transporter. Can also transport other divalent cations such as Fe(2 ), Sr(2 ), Ba(2 ), Mn(2 ) and Co(2 ) but to a much less extent than Mg(2 )

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
13613604 .. 13616345
2742 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g10320.5

Sequence Viewer

Length: 1011 bp
ATGGGGTTTTCGGAGAATACAAAGGGGTTGATACTGGCGATGGCGTCGAGCGCCTTCATCGGGGCGAGCTTCATCCTGAAGAAGAAGGGTCTCAAGCGCGCCGCCGCCGCCGGAACCCGAGCAGGAGTTGGTGGGTATGCATACTTACTAGAACCACTCTGGTGGGCTGGCATGATCACCATGATTGTTGGGGAAGTTGCCAATTTCGTGGCTTATGTATATGCTCCGGCAGTTCTTGTAACCCCACTTGGTGCACTGAGTATAATCGTCAGTGCTGTTTTGGCTCACTTCTTGTTGAAGGAACCAATAACGAAAATGGGTATTGTTGGATGTGTTACCTGCATCGTGGGATCAGTTGTGATTGTGATCCATGCACCTCAGGAGCATAGTCTAAATTCTGTAGAGGAAATCTGGGTCCTGGCGACCCAAACAGCCTTTTTGATTTATGTTGCAGTTACAATTTCCCTAGTGTTAGTTTTGGTCTTGCATTTTGAACCTCGGTATGGACAAACGAACATACTGGTCTATTTGGGAATCTGTTCCTTGATGGGTTCACTTACGGTTGTAAGCATAAAGGCAATTGGAATTGCTATAAAGCTAACTCTTGAGGGAGTAAGTCAGATAGCTTATCCACAGACATGGTTTTTTCTGACAGTTGCAATAATCTGCATTGTTACACAGTTAAATTACCTTAACAAGGCTTTGGATACGTTCAATGCTGCAATTGTTGCCCCAGTATATTATGTGATGTTCACAACTCTGACCATAATTGCTAGTGTAATAATGTTCAAGGATTGGTCTGGTCAGAATGTAAGCAGCATAGCCTCTGAAATATGTGGATTCATCACTGTGCTGTCAGGAACCATCATACTCCATGCAACAAGAGATCAGGAACCACCTGCTCCACAACCACAAGGAATTGTAACATGGTACATTAGAGGAGAGTCAGTGAAGAGTTCTGAAGATGAACGTTTGCTCACTTTACAGAATTCAGATTATCCTAAACCGTAA

Protein Analysis

337

Amino Acids

36.22

Weight (kDa)

6.95

Isoelectric Point (pI)

23.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 907
Acc36I ACCTGC 2 cut(s) 347, 907
AccII CGCG 1 cut(s) 99
AciI CCGC 3 cut(s) 102, 105, 108
AclI AACGTT 1 cut(s) 970
AclWI GGATC 2 cut(s) 358, 361
AcsI RAATTY 2 cut(s) 394, 988
AcuI CTGAAG 2 cut(s) 98, 981
AcyI GRCGYC 1 cut(s) 44
AdeI CACNNNGTG 1 cut(s) 251
AfaI GTAC 1 cut(s) 932
AfiI CCNNNNNNNGG 3 cut(s) 60, 503, 697
AgsI TTSAA 4 cut(s) 298, 494, 715, 790
AjnI CCWGG 1 cut(s) 417
AleI CACNNNNGTG 1 cut(s) 160
AluBI AGCT 3 cut(s) 69, 598, 626
AluI AGCT 3 cut(s) 69, 598, 626
Alw21I GWGCWC 1 cut(s) 256
Alw26I GTCTC 1 cut(s) 95
Alw44I GTGCAC 1 cut(s) 252
AlwI GGATC 2 cut(s) 358, 361
Ama87I CYCGRG 1 cut(s) 117
ApaLI GTGCAC 1 cut(s) 252
ApeKI GCWGC 2 cut(s) 719, 816
ApoI RAATTY 2 cut(s) 394, 988
Asp700I GAANNNNTTC 1 cut(s) 538
AspLEI GCGC 3 cut(s) 53, 99, 101
AspS9I GGNCC 1 cut(s) 415
AsuHPI GGTGA 1 cut(s) 169
AvaI CYCGRG 1 cut(s) 117
AvaII GGWCC 1 cut(s) 415
AxyI CCTNAGG 1 cut(s) 378
BaeGI GKGCMC 1 cut(s) 256
Bbv12I GWGCWC 1 cut(s) 256
BbvI GCAGC 2 cut(s) 706, 828
BccI CCATC 3 cut(s) 34, 541, 872
BciT130I CCWGG 1 cut(s) 419
BciVI GTATCC 1 cut(s) 700
BclI TGATCA 1 cut(s) 174
BcoDI GTCTC 1 cut(s) 95
BfaI CTAG 3 cut(s) 149, 467, 774
BfmI CTRYAG 1 cut(s) 399
BfoI RGCGCY 1 cut(s) 54
BfuAI ACCTGC 2 cut(s) 347, 907
BfuI GTATCC 1 cut(s) 700
BisI GCNGC 5 cut(s) 102, 105, 108, 720, 817
BlsI GCNGC 5 cut(s) 103, 106, 109, 721, 818
Bme1390I CCNGG 1 cut(s) 419
Bme18I GGWCC 1 cut(s) 415
BmeT110I CYCGRG 1 cut(s) 117
BmgT120I GGNCC 1 cut(s) 415
BmiI GGNNCC 5 cut(s) 115, 303, 416, 862, 894
BmrFI CCNGG 1 cut(s) 419
BmrI ACTGGG 1 cut(s) 728
BmsI GCATC 1 cut(s) 351
BmuI ACTGGG 1 cut(s) 728
BpuEI CTTGAG 2 cut(s) 77, 626
BsaBI GATNNNNATC 1 cut(s) 365
BsaHI GRCGYC 1 cut(s) 44
BsaI GGTCTC 1 cut(s) 95
BsaJI CCNNGG 1 cut(s) 497
BsaXI ACNNNNNCTCC 2 cut(s) 933, 963
Bsc4I CCNNNNNNNGG 3 cut(s) 60, 503, 697
Bse1I ACTGG 3 cut(s) 39, 525, 734
Bse21I CCTNAGG 1 cut(s) 378
Bse8I GATNNNNATC 1 cut(s) 365
BseBI CCWGG 1 cut(s) 419
BseDI CCNNGG 1 cut(s) 497
BseGI GGATG 2 cut(s) 72, 335
BseJI GATNNNNATC 1 cut(s) 365
BseLI CCNNNNNNNGG 3 cut(s) 60, 503, 697
BseMII CTCAG 2 cut(s) 248, 392
BseNI ACTGG 3 cut(s) 39, 525, 734
BsePI GCGCGC 1 cut(s) 97
BseRI GAGGAG 1 cut(s) 954
BseSI GKGCMC 1 cut(s) 256
BseXI GCAGC 2 cut(s) 706, 828
Bsh1236I CGCG 1 cut(s) 99
BsiHKAI GWGCWC 1 cut(s) 256
BsiHKCI CYCGRG 1 cut(s) 117
BsiSI CCGG 2 cut(s) 111, 227
BslI CCNNNNNNNGG 3 cut(s) 60, 503, 697
BsmAI GTCTC 1 cut(s) 95
Bso31I GGTCTC 1 cut(s) 95
BsoBI CYCGRG 1 cut(s) 117
Bsp1286I GDGCHC 1 cut(s) 256
Bsp143I GATC 4 cut(s) 174, 350, 366, 886
BspACI CCGC 3 cut(s) 102, 105, 108
BspCNI CTCAG 2 cut(s) 249, 391
BspFNI CGCG 1 cut(s) 99
BspLI GGNNCC 5 cut(s) 115, 303, 416, 862, 894
BspMI ACCTGC 2 cut(s) 347, 907
BspPI GGATC 2 cut(s) 358, 361
BspTNI GGTCTC 1 cut(s) 95
BsrI ACTGG 3 cut(s) 39, 525, 734
BssECI CCNNGG 1 cut(s) 497
BssHII GCGCGC 1 cut(s) 97
BssMI GATC 4 cut(s) 174, 350, 366, 886
BssNI GRCGYC 1 cut(s) 44
Bst2UI CCWGG 1 cut(s) 419
Bst4CI ACNGT 5 cut(s) 562, 655, 681, 850, 1008
Bst6I CTCTTC 1 cut(s) 947
BstACI GRCGYC 1 cut(s) 44
BstAPI GCANNNNNTGC 1 cut(s) 728
BstC8I GCNNGC 3 cut(s) 67, 99, 169
BstDEI CTNAG 2 cut(s) 257, 378
BstENI CCTNNNNNAGG 1 cut(s) 695
BstF5I GGATG 2 cut(s) 72, 335
BstFNI CGCG 1 cut(s) 99
BstH2I RGCGCY 1 cut(s) 54
BstHHI GCGC 3 cut(s) 53, 99, 101
BstKTI GATC 4 cut(s) 177, 353, 369, 889
BstMAI GTCTC 1 cut(s) 95
BstMBI GATC 4 cut(s) 174, 350, 366, 886
BstMWI GCNNNNNNNGC 4 cut(s) 50, 107, 281, 728
BstNI CCWGG 1 cut(s) 419
BstSCI CCNGG 1 cut(s) 417
BstSFI CTRYAG 1 cut(s) 399
BstSLI GKGCMC 1 cut(s) 256
BstUI CGCG 1 cut(s) 99
BstV1I GCAGC 2 cut(s) 706, 828
BstXI CCANNNNNNTGG 3 cut(s) 162, 208, 639
Bsu36I CCTNAGG 1 cut(s) 378
BsuI GTATCC 1 cut(s) 700
BtgZI GCGATG 1 cut(s) 53
BtsCI GGATG 2 cut(s) 72, 335
BtsIMutI CAGTG 4 cut(s) 254, 277, 846, 954
BveI ACCTGC 2 cut(s) 347, 907
Cac8I GCNNGC 3 cut(s) 67, 99, 169
CfoI GCGC 3 cut(s) 53, 99, 101
Cfr13I GGNCC 1 cut(s) 415
CseI GACGC 1 cut(s) 33
Csp6I GTAC 1 cut(s) 931
CviAII CATG 6 cut(s) 172, 181, 371, 639, 875, 927
CviJI RGCY 9 cut(s) 69, 167, 212, 284, 434, 598, 626, 701, 824
CviKI_1 RGCY 9 cut(s) 69, 167, 212, 284, 434, 598, 626, 701, 824
CviQI GTAC 1 cut(s) 931
DdeI CTNAG 2 cut(s) 257, 378
DpnI GATC 4 cut(s) 176, 352, 368, 888
DpnII GATC 4 cut(s) 174, 350, 366, 886
DraIII CACNNNGTG 1 cut(s) 251
Eam1104I CTCTTC 1 cut(s) 947
EarI CTCTTC 1 cut(s) 947
Eco31I GGTCTC 1 cut(s) 95
Eco47I GGWCC 1 cut(s) 415
Eco57I CTGAAG 2 cut(s) 98, 981
Eco81I CCTNAGG 1 cut(s) 378
Eco88I CYCGRG 1 cut(s) 117
EcoNI CCTNNNNNAGG 1 cut(s) 695
EcoO109I RGGNCCY 1 cut(s) 415
EcoRI GAATTC 1 cut(s) 988
EcoRII CCWGG 1 cut(s) 417
EcoT22I ATGCAT 1 cut(s) 142
FaeI CATG 6 cut(s) 175, 184, 374, 642, 878, 930
FatI CATG 6 cut(s) 171, 180, 370, 638, 874, 926
FbaI TGATCA 1 cut(s) 174
Fnu4HI GCNGC 5 cut(s) 102, 105, 108, 720, 817
FokI GGATG 2 cut(s) 59, 342
Fsp4HI GCNGC 5 cut(s) 102, 105, 108, 720, 817
FspBI CTAG 3 cut(s) 149, 467, 774
GlaI GCGC 3 cut(s) 52, 98, 100
GluI GCNGC 5 cut(s) 102, 105, 108, 720, 817
HaeII RGCGCY 1 cut(s) 54
HapII CCGG 2 cut(s) 111, 227
HgaI GACGC 1 cut(s) 33
HhaI GCGC 3 cut(s) 53, 99, 101
Hin1I GRCGYC 1 cut(s) 44
Hin1II CATG 6 cut(s) 175, 184, 374, 642, 878, 930
Hin6I GCGC 3 cut(s) 51, 97, 99
HinP1I GCGC 3 cut(s) 51, 97, 99
HinfI GANTC 3 cut(s) 534, 840, 944
HpaII CCGG 2 cut(s) 111, 227
HphI GGTGA 1 cut(s) 169
Hpy166II GTNNAC 3 cut(s) 254, 554, 753
Hpy188I TCNGA 8 cut(s) 13, 621, 651, 762, 807, 829, 961, 994
Hpy188III TCNNGA 5 cut(s) 76, 380, 605, 858, 890
Hpy8I GTNNAC 3 cut(s) 254, 554, 753
Hpy99I CGWCG 1 cut(s) 49
HpyAV CCTTC 3 cut(s) 64, 79, 292
HpyCH4III ACNGT 5 cut(s) 562, 655, 681, 850, 1008
HpyCH4IV ACGT 2 cut(s) 710, 970
HpyF10VI GCNNNNNNNGC 4 cut(s) 50, 107, 281, 728
HpyF3I CTNAG 2 cut(s) 257, 378
HpySE526I ACGT 2 cut(s) 710, 970
Hsp92I GRCGYC 1 cut(s) 44
Hsp92II CATG 6 cut(s) 175, 184, 374, 642, 878, 930
HspAI GCGC 3 cut(s) 51, 97, 99
Ksp22I TGATCA 1 cut(s) 174
Kzo9I GATC 4 cut(s) 174, 350, 366, 886
LmnI GCTCC 3 cut(s) 229, 382, 907
Lsp1109I GCAGC 2 cut(s) 706, 828
LweI GCATC 1 cut(s) 351
MaeI CTAG 3 cut(s) 149, 467, 774
MaeII ACGT 2 cut(s) 710, 970
MaeIII GTNAC 5 cut(s) 238, 334, 454, 673, 922
MalI GATC 4 cut(s) 176, 352, 368, 888
MboI GATC 4 cut(s) 174, 350, 366, 886
MboII GAAGA 4 cut(s) 91, 94, 964, 974
MfeI CAATTG 2 cut(s) 579, 723
MhlI GDGCHC 1 cut(s) 256
MlyI GAGTC 1 cut(s) 953
MmeI TCCRAC 1 cut(s) 307
MnlI CCTC 6 cut(s) 387, 397, 507, 601, 835, 932
Mph1103I ATGCAT 1 cut(s) 142
MroXI GAANNNNTTC 1 cut(s) 538
MseI TTAA 2 cut(s) 683, 693
MslI CAYNNNNRTG 3 cut(s) 160, 637, 848
MspI CCGG 2 cut(s) 111, 227
MspR9I CCNGG 1 cut(s) 419
MunI CAATTG 2 cut(s) 579, 723
MvaI CCWGG 1 cut(s) 419
MvnI CGCG 1 cut(s) 99
MwoI GCNNNNNNNGC 4 cut(s) 50, 107, 281, 728
NdeII GATC 4 cut(s) 174, 350, 366, 886
NlaIII CATG 6 cut(s) 175, 184, 374, 642, 878, 930
NlaIV GGNNCC 5 cut(s) 115, 303, 416, 862, 894
NsiI ATGCAT 1 cut(s) 142
OliI CACNNNNGTG 1 cut(s) 160
PaqCI CACCTGC 1 cut(s) 907
PauI GCGCGC 1 cut(s) 97
PdmI GAANNNNTTC 1 cut(s) 538
PfeI GAWTC 2 cut(s) 534, 840
PkrI GCNGC 5 cut(s) 103, 106, 109, 721, 818
PleI GAGTC 1 cut(s) 952
PpsI GAGTC 1 cut(s) 952
PpuMI RGGWCCY 1 cut(s) 415
Psp1406I AACGTT 1 cut(s) 970
Psp5II RGGWCCY 1 cut(s) 415
Psp6I CCWGG 1 cut(s) 417
PspGI CCWGG 1 cut(s) 417
PspN4I GGNNCC 5 cut(s) 115, 303, 416, 862, 894
PspPI GGNCC 1 cut(s) 415
PspPPI RGGWCCY 1 cut(s) 415
PteI GCGCGC 1 cut(s) 97
RsaI GTAC 1 cut(s) 932
RsaNI GTAC 1 cut(s) 931
RseI CAYNNNNRTG 3 cut(s) 160, 637, 848
SaqAI TTAA 2 cut(s) 683, 693
SatI GCNGC 5 cut(s) 102, 105, 108, 720, 817
Sau3AI GATC 4 cut(s) 174, 350, 366, 886
Sau96I GGNCC 1 cut(s) 415
SchI GAGTC 1 cut(s) 953
ScrFI CCNGG 1 cut(s) 419
SduI GDGCHC 1 cut(s) 256
SfaNI GCATC 1 cut(s) 351
SfcI CTRYAG 1 cut(s) 399
SinI GGWCC 1 cut(s) 415
SmiMI CAYNNNNRTG 3 cut(s) 160, 637, 848
SmlI CTYRAG 2 cut(s) 92, 605
SmoI CTYRAG 2 cut(s) 92, 605
SsiI CCGC 3 cut(s) 102, 105, 108
SspMI CTAG 3 cut(s) 149, 467, 774
StyD4I CCNGG 1 cut(s) 417
TaaI ACNGT 5 cut(s) 562, 655, 681, 850, 1008
TaiI ACGT 2 cut(s) 713, 973
TaqI TCGA 1 cut(s) 47
TauI GCSGC 3 cut(s) 104, 107, 110
TfiI GAWTC 2 cut(s) 534, 840
Tru1I TTAA 2 cut(s) 683, 693
Tru9I TTAA 2 cut(s) 683, 693
TscAI CASTG 4 cut(s) 261, 277, 853, 954
TseI GCWGC 2 cut(s) 719, 816
TspDTI ATGAA 4 cut(s) 46, 61, 832, 981
TspRI CASTG 4 cut(s) 261, 277, 853, 954
VneI GTGCAC 1 cut(s) 252
VpaK11BI GGWCC 1 cut(s) 415
XagI CCTNNNNNAGG 1 cut(s) 695
XapI RAATTY 2 cut(s) 394, 988
XmnI GAANNNNTTC 1 cut(s) 538
XspI CTAG 3 cut(s) 149, 467, 774
Zsp2I ATGCAT 1 cut(s) 142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.