Rh2BG316700

Acts as a Mg(2 ) transporter. Can also transport other divalent cations such as Fe(2 ), Sr(2 ), Ba(2 ), Mn(2 ) and Co(2 ) but to a much less extent than Mg(2 )

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000984
Physical Location & Seq
Forward (+)
37577039 .. 37580178
3140 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG316700.1

Sequence Viewer

Length: 783 bp
ATGTCATCGAGCAATTTGAAAGGGTTCATATTGGCCGTGGTCTCAAGCGCCTTCATTGGCTCCAGCTTCATCATCAAGAAGAAGGGTCTCCGCCGAGCCGGCAACAATGGAACTCGTGCCAGTTCTGGAGGATATGGGTATCTGCGGGAGCCTCTATGGTGGATTGGAATGGTCACAATGGTTGTTGGAGAGATAGCAAATTTTGTAGCATACATATACGCACCCGCCGGGCTTGTCACGCCGCTTGGTGCTTTGAGTATCATTGTTAGTGCGGTGTTAGCGCATTTCCTGTTAAAGGAGAAACTCCAGAAAATGGGAATGTTGGGCTGCCTTTTATGCATAGTGGGTTCGGTTGTGATTGTACTCCATGCACCCGAAGAGCAGACTCTTACTTCCGTCCAACAAATCTGGGATTTAGCAATACAACCAGCTTTCCTTTTGTATACAGCCTCAGTGATAGCTGTAACGCTAGTCCTTATCTTGTATTGTTCCCCCCGCTATGGCCAAACCAATATACTGATTTATATAGGAATCTGCTCAATTATTGGATCATTGACTGTCATGAGCATAAAAGCCATTGGCATTGCAATAAAACTCACAATAGAGGGCACAAACCAGGCAATAACTTTCTCTTCTTTATCCTCTGAAATTTTTTGTTATGTATTCTTTTGTTTTAGAAATCTAAGAGATGCTTGTGAGATTTGTTATGTGATTGTATTAGTATTCATGATTCAGTGTTTACATTTAAAGAGAGACCTGGTTTTCCTAGTGCGTGGGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mg_trans_NIPA

Protein Analysis

260

Amino Acids

28.37

Weight (kDa)

9.07

Isoelectric Point (pI)

36.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mg_trans_NIPA PF05653 5 - 211 4.8e-92 Magnesium transporter NIPA
EamA PF00892 55 - 121 1.3e-07 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 313
AccI GTMKAC 1 cut(s) 443
AciI CCGC 6 cut(s) 91, 145, 225, 242, 272, 496
AclWI GGATC 1 cut(s) 556
AcoI YGGCCR 2 cut(s) 33, 502
AcsI RAATTY 2 cut(s) 199, 648
AfaI GTAC 1 cut(s) 363
AfiI CCNNNNNNNGG 3 cut(s) 295, 313, 500
AgsI TTSAA 1 cut(s) 19
AjnI CCWGG 2 cut(s) 615, 756
AluBI AGCT 3 cut(s) 66, 431, 461
AluI AGCT 3 cut(s) 66, 431, 461
Alw26I GTCTC 3 cut(s) 46, 92, 747
AlwI GGATC 1 cut(s) 556
AoxI GGCC 2 cut(s) 33, 502
ApeKI GCWGC 1 cut(s) 327
ApoI RAATTY 2 cut(s) 199, 648
Asp700I GAANNNNTTC 1 cut(s) 23
AspLEI GCGC 2 cut(s) 50, 283
AsuC2I CCSGG 1 cut(s) 229
BaeGI GKGCMC 1 cut(s) 611
BalI TGGCCA 1 cut(s) 504
BauI CACGAG 1 cut(s) 114
BbvI GCAGC 1 cut(s) 314
BceAI ACGGC 1 cut(s) 20
BciT130I CCWGG 2 cut(s) 617, 758
BcnI CCSGG 1 cut(s) 229
BcoDI GTCTC 3 cut(s) 46, 92, 747
BfaI CTAG 2 cut(s) 470, 767
BfoI RGCGCY 1 cut(s) 51
BglI GCCNNNNNGGC 1 cut(s) 99
BisI GCNGC 2 cut(s) 242, 328
BlsI GCNGC 2 cut(s) 243, 329
Bme1390I CCNGG 3 cut(s) 229, 617, 758
BmiI GGNNCC 2 cut(s) 61, 150
BmrFI CCNGG 3 cut(s) 229, 617, 758
BmsI GCATC 1 cut(s) 679
BpmI CTGGAG 3 cut(s) 46, 147, 290
BpuEI CTTGAG 1 cut(s) 28
BpuMI CCSGG 1 cut(s) 229
BsaI GGTCTC 3 cut(s) 46, 92, 747
BsaJI CCNNGG 1 cut(s) 36
Bsc4I CCNNNNNNNGG 3 cut(s) 295, 313, 500
Bse118I RCCGGY 1 cut(s) 98
Bse1I ACTGG 1 cut(s) 120
Bse3DI GCAATG 1 cut(s) 582
BseBI CCWGG 2 cut(s) 617, 758
BseDI CCNNGG 1 cut(s) 36
BseLI CCNNNNNNNGG 3 cut(s) 295, 313, 500
BseMI GCAATG 1 cut(s) 582
BseMII CTCAG 1 cut(s) 465
BseNI ACTGG 1 cut(s) 120
BseSI GKGCMC 1 cut(s) 611
BseXI GCAGC 1 cut(s) 314
BshFI GGCC 2 cut(s) 35, 504
BsiSI CCGG 2 cut(s) 99, 228
BslI CCNNNNNNNGG 3 cut(s) 295, 313, 500
BsmAI GTCTC 3 cut(s) 46, 92, 747
BsnI GGCC 2 cut(s) 35, 504
Bso31I GGTCTC 3 cut(s) 46, 92, 747
Bsp1286I GDGCHC 1 cut(s) 611
Bsp143I GATC 1 cut(s) 548
BspACI CCGC 6 cut(s) 91, 145, 225, 242, 272, 496
BspANI GGCC 2 cut(s) 35, 504
BspCNI CTCAG 1 cut(s) 464
BspHI TCATGA 2 cut(s) 561, 726
BspLI GGNNCC 2 cut(s) 61, 150
BspPI GGATC 1 cut(s) 556
BspQI GCTCTTC 1 cut(s) 372
BspTNI GGTCTC 3 cut(s) 46, 92, 747
BsrDI GCAATG 1 cut(s) 582
BsrFI RCCGGY 1 cut(s) 98
BsrI ACTGG 1 cut(s) 120
BssAI RCCGGY 1 cut(s) 98
BssECI CCNNGG 1 cut(s) 36
BssMI GATC 1 cut(s) 548
BssNAI GTATAC 1 cut(s) 444
BssSI CACGAG 1 cut(s) 114
Bst1107I GTATAC 1 cut(s) 444
Bst2BI CACGAG 1 cut(s) 114
Bst2UI CCWGG 2 cut(s) 617, 758
Bst4CI ACNGT 1 cut(s) 559
Bst6I CTCTTC 2 cut(s) 372, 637
BstC8I GCNNGC 1 cut(s) 100
BstDEI CTNAG 2 cut(s) 451, 683
BstDSI CCRYGG 1 cut(s) 36
BstENI CCTNNNNNAGG 1 cut(s) 293
BstH2I RGCGCY 1 cut(s) 51
BstHHI GCGC 2 cut(s) 50, 283
BstKTI GATC 1 cut(s) 551
BstMAI GTCTC 3 cut(s) 46, 92, 747
BstMBI GATC 1 cut(s) 548
BstMWI GCNNNNNNNGC 4 cut(s) 99, 238, 278, 336
BstNI CCWGG 2 cut(s) 617, 758
BstSCI CCNGG 3 cut(s) 227, 615, 756
BstSLI GKGCMC 1 cut(s) 611
BstV1I GCAGC 1 cut(s) 314
BstZ17I GTATAC 1 cut(s) 444
BsuRI GGCC 2 cut(s) 35, 504
BtgI CCRYGG 1 cut(s) 36
BtsIMutI CAGTG 2 cut(s) 459, 740
Cac8I GCNNGC 1 cut(s) 100
CciI TCATGA 2 cut(s) 561, 726
CfoI GCGC 2 cut(s) 50, 283
Cfr10I RCCGGY 1 cut(s) 98
CsiI ACCWGGT 1 cut(s) 756
Csp6I GTAC 1 cut(s) 362
CviAII CATG 3 cut(s) 368, 562, 727
CviQI GTAC 1 cut(s) 362
DdeI CTNAG 2 cut(s) 451, 683
DpnI GATC 1 cut(s) 550
DpnII GATC 1 cut(s) 548
DraI TTTAAA 1 cut(s) 747
EaeI YGGCCR 2 cut(s) 33, 502
Eam1104I CTCTTC 2 cut(s) 372, 637
EarI CTCTTC 2 cut(s) 372, 637
EciI GGCGGA 1 cut(s) 80
Eco31I GGTCTC 3 cut(s) 46, 92, 747
EcoNI CCTNNNNNAGG 1 cut(s) 293
EcoRII CCWGG 2 cut(s) 615, 756
EcoT22I ATGCAT 1 cut(s) 341
FaeI CATG 3 cut(s) 371, 565, 730
FalI AAGNNNNNCTT 2 cut(s) 676, 708
FatI CATG 3 cut(s) 367, 561, 726
FauI CCCGC 3 cut(s) 138, 232, 503
FblI GTMKAC 1 cut(s) 443
Fnu4HI GCNGC 2 cut(s) 242, 328
Fsp4HI GCNGC 2 cut(s) 242, 328
FspBI CTAG 2 cut(s) 470, 767
GlaI GCGC 2 cut(s) 49, 282
GluI GCNGC 2 cut(s) 242, 328
GsuI CTGGAG 3 cut(s) 46, 147, 290
HaeII RGCGCY 1 cut(s) 51
HaeIII GGCC 2 cut(s) 35, 504
HapII CCGG 2 cut(s) 99, 228
HhaI GCGC 2 cut(s) 50, 283
Hin1II CATG 3 cut(s) 371, 565, 730
Hin6I GCGC 2 cut(s) 48, 281
HinP1I GCGC 2 cut(s) 48, 281
HinfI GANTC 3 cut(s) 385, 531, 730
HpaII CCGG 2 cut(s) 99, 228
Hpy166II GTNNAC 2 cut(s) 444, 740
Hpy188I TCNGA 1 cut(s) 646
Hpy188III TCNNGA 5 cut(s) 76, 126, 307, 562, 727
Hpy8I GTNNAC 2 cut(s) 444, 740
HpyAV CCTTC 2 cut(s) 61, 76
HpyCH4III ACNGT 1 cut(s) 559
HpyCH4V TGCA 3 cut(s) 339, 371, 587
HpyF10VI GCNNNNNNNGC 4 cut(s) 99, 238, 278, 336
HpyF3I CTNAG 2 cut(s) 451, 683
Hsp92II CATG 3 cut(s) 371, 565, 730
HspAI GCGC 2 cut(s) 48, 281
KroI GCCGGC 1 cut(s) 98
KroNI GCCGGC 1 cut(s) 100
Kzo9I GATC 1 cut(s) 548
LguI GCTCTTC 1 cut(s) 372
LmnI GCTCC 2 cut(s) 65, 148
Lsp1109I GCAGC 1 cut(s) 314
LweI GCATC 1 cut(s) 679
MabI ACCWGGT 1 cut(s) 756
MaeI CTAG 2 cut(s) 470, 767
MaeIII GTNAC 3 cut(s) 172, 235, 463
MalI GATC 1 cut(s) 550
MboI GATC 1 cut(s) 548
MboII GAAGA 3 cut(s) 91, 389, 624
MhlI GDGCHC 1 cut(s) 611
MlsI TGGCCA 1 cut(s) 504
MluCI AATT 4 cut(s) 13, 199, 540, 648
MluNI TGGCCA 1 cut(s) 504
MlyI GAGTC 1 cut(s) 379
MmeI TCCRAC 2 cut(s) 166, 424
MnlI CCTC 5 cut(s) 122, 162, 460, 598, 652
Mox20I TGGCCA 1 cut(s) 504
Mph1103I ATGCAT 1 cut(s) 341
MroNI GCCGGC 1 cut(s) 98
MroXI GAANNNNTTC 1 cut(s) 23
MscI TGGCCA 1 cut(s) 504
MseI TTAA 2 cut(s) 293, 746
Msp20I TGGCCA 1 cut(s) 504
MspI CCGG 2 cut(s) 99, 228
MspR9I CCNGG 3 cut(s) 229, 617, 758
MvaI CCWGG 2 cut(s) 617, 758
MwoI GCNNNNNNNGC 4 cut(s) 99, 238, 278, 336
NaeI GCCGGC 1 cut(s) 100
NciI CCSGG 1 cut(s) 229
NdeII GATC 1 cut(s) 548
NgoMIV GCCGGC 1 cut(s) 98
NlaIII CATG 3 cut(s) 371, 565, 730
NlaIV GGNNCC 2 cut(s) 61, 150
NmeAIII GCCGAG 1 cut(s) 119
NmuCI GTSAC 2 cut(s) 172, 235
NsiI ATGCAT 1 cut(s) 341
PagI TCATGA 2 cut(s) 561, 726
PciSI GCTCTTC 1 cut(s) 372
PdiI GCCGGC 1 cut(s) 100
PdmI GAANNNNTTC 1 cut(s) 23
PfeI GAWTC 2 cut(s) 531, 730
PflMI CCANNNNNTGG 1 cut(s) 313
PkrI GCNGC 2 cut(s) 243, 329
PleI GAGTC 1 cut(s) 379
PpsI GAGTC 1 cut(s) 379
Psp6I CCWGG 2 cut(s) 615, 756
PspGI CCWGG 2 cut(s) 615, 756
PspN4I GGNNCC 2 cut(s) 61, 150
RsaI GTAC 1 cut(s) 363
RsaNI GTAC 1 cut(s) 362
SapI GCTCTTC 1 cut(s) 372
SaqAI TTAA 2 cut(s) 293, 746
SatI GCNGC 2 cut(s) 242, 328
Sau3AI GATC 1 cut(s) 548
SchI GAGTC 1 cut(s) 379
ScrFI CCNGG 3 cut(s) 229, 617, 758
SduI GDGCHC 1 cut(s) 611
SetI ASST 4 cut(s) 68, 433, 463, 759
SexAI ACCWGGT 1 cut(s) 756
SfaNI GCATC 1 cut(s) 679
SmlI CTYRAG 1 cut(s) 43
SmoI CTYRAG 1 cut(s) 43
Sse9I AATT 4 cut(s) 13, 199, 540, 648
SsiI CCGC 6 cut(s) 91, 145, 225, 242, 272, 496
SspMI CTAG 2 cut(s) 470, 767
StyD4I CCNGG 3 cut(s) 227, 615, 756
TaaI ACNGT 1 cut(s) 559
TaqI TCGA 1 cut(s) 8
TasI AATT 4 cut(s) 13, 199, 540, 648
TatI WGTACW 1 cut(s) 361
TauI GCSGC 1 cut(s) 244
TfiI GAWTC 2 cut(s) 531, 730
Tru1I TTAA 2 cut(s) 293, 746
Tru9I TTAA 2 cut(s) 293, 746
TscAI CASTG 2 cut(s) 459, 740
TseFI GTSAC 2 cut(s) 172, 235
TseI GCWGC 1 cut(s) 327
Tsp45I GTSAC 2 cut(s) 172, 235
TspDTI ATGAA 4 cut(s) 16, 43, 58, 715
TspGWI ACGGA 1 cut(s) 385
TspRI CASTG 2 cut(s) 459, 740
Van91I CCANNNNNTGG 1 cut(s) 313
XagI CCTNNNNNAGG 1 cut(s) 293
XapI RAATTY 2 cut(s) 199, 648
XmiI GTMKAC 1 cut(s) 443
XmnI GAANNNNTTC 1 cut(s) 23
XspI CTAG 2 cut(s) 470, 767
Zsp2I ATGCAT 1 cut(s) 341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.