Rmu_sc0036275.1_g000001

Acts as a Mg(2 ) transporter. Can also transport other divalent cations such as Fe(2 ), Sr(2 ), Ba(2 ), Mn(2 ) and Co(2 ) but to a much less extent than Mg(2 )

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0036275.1
Physical Location & Seq
Forward (+)
1203 .. 2250
1048 bp
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UTR
Exon/CDS
Intron
Rmu_sc0036275.1_g000001.1.cds

Sequence Viewer

Length: 330 bp
atgttcatgaattcttcgtttcaggctttggataccttcagtgcaactattgttgctccagtatattatgtgatgttcacaactctgaccattattgctagtgtaataatgttcaaggattggtctggtcaggatgtgagcagcatagcctctgaaatttgtggattcattactgtactgtcaggaaccattatactccatgctaccagagatcaggaaccacctcctccacaaggaactgtaacatggtacattagtggagattcaatgaaggcttcagaagatgaagatttgattgctttacacaattcagattttcttgaaccgtaa

Protein Analysis

109

Amino Acids

11.97

Weight (kDa)

4.05

Isoelectric Point (pI)

39.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 10, 156
AcuI CTGAAG 2 cut(s) 22, 261
AfaI GTAC 2 cut(s) 177, 251
AfiI CCNNNNNNNGG 1 cut(s) 233
AgsI TTSAA 3 cut(s) 115, 267, 323
ApeKI GCWGC 1 cut(s) 141
ApoI RAATTY 2 cut(s) 10, 156
BaeI ACNNNNGTAYC 2 cut(s) 241, 274
BbvI GCAGC 1 cut(s) 153
BciVI GTATCC 1 cut(s) 25
BfaI CTAG 1 cut(s) 99
BfuI GTATCC 1 cut(s) 25
BisI GCNGC 1 cut(s) 142
BlsI GCNGC 1 cut(s) 143
BmiI GGNNCC 2 cut(s) 187, 219
BpmI CTGGAG 1 cut(s) 42
Bsc4I CCNNNNNNNGG 1 cut(s) 233
Bse1I ACTGG 1 cut(s) 59
BseGI GGATG 1 cut(s) 139
BseLI CCNNNNNNNGG 1 cut(s) 233
BseNI ACTGG 1 cut(s) 59
BseRI GAGGAG 1 cut(s) 216
BseXI GCAGC 1 cut(s) 153
BslI CCNNNNNNNGG 1 cut(s) 233
Bsp143I GATC 1 cut(s) 211
BspHI TCATGA 1 cut(s) 6
BspLI GGNNCC 2 cut(s) 187, 219
BsrI ACTGG 1 cut(s) 59
BssMI GATC 1 cut(s) 211
Bst4CI ACNGT 4 cut(s) 175, 180, 241, 327
BstENI CCTNNNNNAGG 1 cut(s) 231
BstF5I GGATG 1 cut(s) 139
BstKTI GATC 1 cut(s) 214
BstMBI GATC 1 cut(s) 211
BstV1I GCAGC 1 cut(s) 153
BsuI GTATCC 1 cut(s) 25
BtsCI GGATG 1 cut(s) 139
BtsIMutI CAGTG 1 cut(s) 46
CciI TCATGA 1 cut(s) 6
Csp6I GTAC 2 cut(s) 176, 250
CviAII CATG 3 cut(s) 7, 200, 246
CviJI RGCY 3 cut(s) 26, 149, 275
CviKI_1 RGCY 3 cut(s) 26, 149, 275
CviQI GTAC 2 cut(s) 176, 250
DpnI GATC 1 cut(s) 213
DpnII GATC 1 cut(s) 211
Eco57I CTGAAG 2 cut(s) 22, 261
EcoNI CCTNNNNNAGG 1 cut(s) 231
EcoRI GAATTC 1 cut(s) 10
FaeI CATG 3 cut(s) 10, 203, 249
FaiI YATR 7 cut(s) 8, 64, 69, 146, 194, 201, 247
FatI CATG 3 cut(s) 6, 199, 245
Fnu4HI GCNGC 1 cut(s) 142
FokI GGATG 1 cut(s) 146
Fsp4HI GCNGC 1 cut(s) 142
FspBI CTAG 1 cut(s) 99
GluI GCNGC 1 cut(s) 142
GsuI CTGGAG 1 cut(s) 42
Hin1II CATG 3 cut(s) 10, 203, 249
HinfI GANTC 2 cut(s) 165, 263
Hpy166II GTNNAC 1 cut(s) 78
Hpy188I TCNGA 4 cut(s) 87, 154, 280, 313
Hpy188III TCNNGA 5 cut(s) 7, 131, 183, 215, 320
Hpy8I GTNNAC 1 cut(s) 78
HpyAV CCTTC 2 cut(s) 46, 265
HpyCH4III ACNGT 4 cut(s) 175, 180, 241, 327
HpyCH4V TGCA 1 cut(s) 44
Hsp92II CATG 3 cut(s) 10, 203, 249
Kzo9I GATC 1 cut(s) 211
LmnI GCTCC 1 cut(s) 61
LpnPI CCDG 7 cut(s) 8, 72, 111, 116, 168, 200, 220
Lsp1109I GCAGC 1 cut(s) 153
MaeI CTAG 1 cut(s) 99
MaeIII GTNAC 1 cut(s) 241
MalI GATC 1 cut(s) 213
MboI GATC 1 cut(s) 211
MboII GAAGA 3 cut(s) 6, 293, 299
MluCI AATT 3 cut(s) 10, 156, 307
MnlI CCTC 3 cut(s) 160, 234, 237
NdeII GATC 1 cut(s) 211
NlaIII CATG 3 cut(s) 10, 203, 249
NlaIV GGNNCC 2 cut(s) 187, 219
PagI TCATGA 1 cut(s) 6
PfeI GAWTC 2 cut(s) 165, 263
PkrI GCNGC 1 cut(s) 143
PspN4I GGNNCC 2 cut(s) 187, 219
RsaI GTAC 2 cut(s) 177, 251
RsaNI GTAC 2 cut(s) 176, 250
SatI GCNGC 1 cut(s) 142
Sau3AI GATC 1 cut(s) 211
SetI ASST 2 cut(s) 38, 226
Sse9I AATT 3 cut(s) 10, 156, 307
SspMI CTAG 1 cut(s) 99
TaaI ACNGT 4 cut(s) 175, 180, 241, 327
TasI AATT 3 cut(s) 10, 156, 307
TatI WGTACW 1 cut(s) 175
TfiI GAWTC 2 cut(s) 165, 263
TscAI CASTG 1 cut(s) 46
TseI GCWGC 1 cut(s) 141
TspDTI ATGAA 4 cut(s) 23, 157, 284, 300
TspRI CASTG 1 cut(s) 46
XagI CCTNNNNNAGG 1 cut(s) 231
XapI RAATTY 2 cut(s) 10, 156
XspI CTAG 1 cut(s) 99
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.