Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0000770

Physical Location & Seq

Genomic Coordinates Reverse (-)

12928422 .. 12931168

Gene Structure 2747 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G136800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1068 bp

ATGAGCTCCGAGAGCGCAAATGAGAACTGCCTTGGATATGCTGCAAGGGATCCATCTGGAGTTCTATCTGAATACAAATTCAGCCGCAGGGCTCTTGGGATTGATGACATTTCCATAAAAATTACCCACTGTGGAGTTTGTTATGCTGATGTCATTTGGGCAAGAAACAAACATGGAGACTCAAAGTATCCTTTGGTGCCCGGACATGAGATTGCAGGTATTGTGAAAGAGGTAGGTTCCAATGTTCTTCGCTTCAAAGTTGGGGACCATATCGGAGTGGGAACTTATGTCAACTCATGCAGAGATTGTGAGTATTGTAATGAGGGATTTGAAGTCTATTGTGCGAAGGGTTCAGTCTACACTTTTAATGGTGTTGACGCGGATGGTACAATTACAAAAGGTGGATACTCCAGTCATATAGTTGTCCATGAAAGGTACTGCTTCAAGATACCTGACAACTATCCATTGGCTTCAGCAGCACCTCTGCTTTGTGCTGGAATTACTGTTTATGCTCCTATGAAGCGCCACAAGATGAATCAACCTGGTAAATCTCTAGGAGTGATTGGTCTTGGTGGTCTTGGTCACATGGCAGTGAAGTTTGGGAAGGCATTTGGTTTACATGTAACAGTTTTCAGCACAAGTGTATCGAAGAAAGAGGAAGCCCTAAGCCAGCTTGGTGCAGATAAGTTTGTGGTCTCATCCGACCAAGAGCAGATGACGGCCTTGGTGAAGTCATTGGACTTTCTAATTGATACAGCATCTGGTGATCATCCATTCGATCCATATATGGCATTGTTGAAGACTGGTGGAACTCTGGTCTTGGTGGGATTCCCCAGTGAAGTCAAATTCAGTCCTGCAAGCCTCAATCTGGGTATGAAAACCATCTCTGGCAGTGTGACAGGCGGAACGAAGGATACGCAAGAAATGATAGATTTCTGTGCTGCTCATGAAATTCACCCAATGATTGAAATAATTCCAATTCAATATGCAACGGAAGCTCTCGAGAGGCTAGTAAAAAAAGATGTGAAATACCGGTTTGTAATTGATATTGAAAACTCCCTGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

ADH_N ADH_zinc_N

Protein Analysis

356

Amino Acids

38.46

Weight (kDa)

6.46

Isoelectric Point (pI)

31.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000770)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72680
fragaria_vesca	FvH4_5g10200 FvH4_5g10200 FvH4_5g10200 FvH4_5g10200 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323
malus_domestica	MD14G1142100.v1.1 MD17G1119700.v1.1 MD17G1119800.v1.1 MD17G1119900.v1.1
prunus_persica	Prupe.3G194000_v2.0.a1 Prupe.5G136800_v2.0.a1 Prupe.5G136800_v2.0.a1 Prupe.5G136800_v2.0.a1 Prupe.5G136800_v2.0.a1
pyrus_communis	pycom14g11770 pycom17g11030 pycom17g11040 pycom17g11060
rosa_chinensis	RchiOBHm_Chr2g0142921 RchiOBHm_Chr2g0155511 RchiOBHm_Chr2g0155561 RchiOBHm_Chr7g0188021 RchiOBHm_Chr7g0188031
rosa_laevigata	RLG00000004732 RLG00000020842 RLG00000020844 RLG00000020845
rosa_multiflora	Rmu_co8454251.1_g000001 Rmu_sc0003439.1_g000010 Rmu_sc0003645.1_g000002 Rmu_sc0007929.1_g000001 Rmu_ssc0000422.1_g000013 Rmu_ssc0000422.1_g000015
rosa_roxburghii	Rroxscaffold_2G00093650 Rroxscaffold_3G00266800
rosa_rugosa	Rorug02G0376800 Rorug02G0376900 Rorug02G0447500 Rorug06G0487000 Rorug06G0487000 Rorug06G0487100 Rorug06G0487200 Rorug06G0487300 Rorug06G0487400 Rorug06G0487500
rosa_samantha	Rh2AG429700 Rh2BG438800 Rh2BG524800 Rh2BG525100 Rh2CG415100 Rh2CG499200 Rh2DG448900 Rh2DG533800 Rh7BG093400 Rh7CG092600 Rh7CG092800
rosa_wichuraiana	Rw2G035120 Rw2G042240 Rw2G042250 Rw7G007930 Rw7G007940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	206
AccB1I	GGYRCC	1 cut(s)	196
AccI	GTMKAC	1 cut(s)	357
AccII	CGCG	1 cut(s)	380
AciI	CCGC	3 cut(s)	85, 380, 903
AclWI	GGATC	3 cut(s)	44, 57, 773
AcsI	RAATTY	3 cut(s)	77, 845, 951
AcuI	CTGAAG	1 cut(s)	456
AfaI	GTAC	2 cut(s)	388, 437
AfiI	CCNNNNNNNGG	1 cut(s)	868
AflIII	ACRYGT	1 cut(s)	619
AgeI	ACCGGT	1 cut(s)	1032
AgsI	TTSAA	7 cut(s)	256, 332, 445, 799, 968, 983, 1052
AjnI	CCWGG	1 cut(s)	541
AluBI	AGCT	3 cut(s)	6, 673, 998
AluI	AGCT	3 cut(s)	6, 673, 998
Alw21I	GWGCWC	1 cut(s)	8
Alw26I	GTCTC	2 cut(s)	171, 700
AlwI	GGATC	3 cut(s)	44, 57, 773
AlwNI	CAGNNNCTG	1 cut(s)	761
Ama87I	CYCGRG	1 cut(s)	1001
AoxI	GGCC	1 cut(s)	720
ApeKI	GCWGC	3 cut(s)	41, 476, 941
ApoI	RAATTY	3 cut(s)	77, 845, 951
AsiGI	ACCGGT	1 cut(s)	1032
Asp700I	GAANNNNTTC	1 cut(s)	972
AspLEI	GCGC	2 cut(s)	17, 525
AspS9I	GGNCC	1 cut(s)	265
AsuC2I	CCSGG	1 cut(s)	201
AsuHPI	GGTGA	3 cut(s)	739, 776, 947
AvaI	CYCGRG	1 cut(s)	1001
AvaII	GGWCC	1 cut(s)	265
BaeGI	GKGCMC	1 cut(s)	201
BaeI	ACNNNNGTAYC	4 cut(s)	397, 430, 627, 660
BamHI	GGATCC	1 cut(s)	49
BanI	GGYRCC	1 cut(s)	196
BanII	GRGCYC	2 cut(s)	8, 94
BbsI	GAAGAC	1 cut(s)	806
Bbv12I	GWGCWC	1 cut(s)	8
BbvI	GCAGC	3 cut(s)	28, 488, 928
BccI	CCATC	3 cut(s)	61, 377, 890
BceAI	ACGGC	1 cut(s)	735
BciT130I	CCWGG	1 cut(s)	543
BciVI	GTATCC	3 cut(s)	198, 398, 907
BclI	TGATCA	1 cut(s)	766
BcnI	CCSGG	1 cut(s)	201
BcoDI	GTCTC	2 cut(s)	171, 700
BfaI	CTAG	2 cut(s)	554, 1010
BfoI	RGCGCY	1 cut(s)	526
BfuAI	ACCTGC	1 cut(s)	206
BfuI	GTATCC	3 cut(s)	198, 398, 907
BisI	GCNGC	4 cut(s)	42, 85, 477, 942
BlsI	GCNGC	4 cut(s)	43, 86, 478, 943
Bme1390I	CCNGG	2 cut(s)	201, 543
Bme18I	GGWCC	1 cut(s)	265
BmeT110I	CYCGRG	1 cut(s)	1001
BmgT120I	GGNCC	1 cut(s)	265
BmiI	GGNNCC	4 cut(s)	51, 198, 238, 266
BmrFI	CCNGG	2 cut(s)	201, 543
BmrI	ACTGGG	1 cut(s)	828
BmsI	GCATC	1 cut(s)	767
BmuI	ACTGGG	1 cut(s)	828
BpiI	GAAGAC	1 cut(s)	806
BpmI	CTGGAG	2 cut(s)	78, 394
Bpu10I	CCTNAGC	1 cut(s)	665
BpuMI	CCSGG	1 cut(s)	201
BsaI	GGTCTC	1 cut(s)	700
BsaJI	CCNNGG	2 cut(s)	31, 723
BsaWI	WCCGGW	1 cut(s)	1032
Bsc4I	CCNNNNNNNGG	1 cut(s)	868
Bse118I	RCCGGY	1 cut(s)	1032
Bse1I	ACTGG	3 cut(s)	411, 808, 834
BseBI	CCWGG	1 cut(s)	543
BseDI	CCNNGG	2 cut(s)	31, 723
BseGI	GGATG	3 cut(s)	388, 698, 769
BseLI	CCNNNNNNNGG	1 cut(s)	868
BseNI	ACTGG	3 cut(s)	411, 808, 834
BseSI	GKGCMC	1 cut(s)	201
BseXI	GCAGC	3 cut(s)	28, 488, 928
BsgI	GTGCAG	1 cut(s)	699
Bsh1236I	CGCG	1 cut(s)	380
BshFI	GGCC	1 cut(s)	722
BshNI	GGYRCC	1 cut(s)	196
BshTI	ACCGGT	1 cut(s)	1032
BsiHKAI	GWGCWC	1 cut(s)	8
BsiHKCI	CYCGRG	1 cut(s)	1001
BsiSI	CCGG	2 cut(s)	201, 1033
BslFI	GGGAC	1 cut(s)	278
BslI	CCNNNNNNNGG	1 cut(s)	868
BsmAI	GTCTC	2 cut(s)	171, 700
BsmFI	GGGAC	1 cut(s)	278
BsnI	GGCC	1 cut(s)	722
Bso31I	GGTCTC	1 cut(s)	700
BsoBI	CYCGRG	1 cut(s)	1001
Bsp1286I	GDGCHC	3 cut(s)	8, 94, 201
Bsp143I	GATC	3 cut(s)	49, 766, 778
BspACI	CCGC	3 cut(s)	85, 380, 903
BspANI	GGCC	1 cut(s)	722
BspFNI	CGCG	1 cut(s)	380
BspHI	TCATGA	1 cut(s)	946
BspLI	GGNNCC	4 cut(s)	51, 198, 238, 266
BspMI	ACCTGC	1 cut(s)	206
BspPI	GGATC	3 cut(s)	44, 57, 773
BspT107I	GGYRCC	1 cut(s)	196
BspTNI	GGTCTC	1 cut(s)	700
BsrFI	RCCGGY	1 cut(s)	1032
BsrI	ACTGG	3 cut(s)	411, 808, 834
BssAI	RCCGGY	1 cut(s)	1032
BssECI	CCNNGG	2 cut(s)	31, 723
BssMI	GATC	3 cut(s)	49, 766, 778
BssT1I	CCWWGG	2 cut(s)	31, 723
Bst2UI	CCWGG	1 cut(s)	543
Bst4CI	ACNGT	3 cut(s)	131, 505, 628
BstC8I	GCNNGC	2 cut(s)	671, 859
BstDEI	CTNAG	1 cut(s)	665
BstF5I	GGATG	3 cut(s)	388, 698, 769
BstFNI	CGCG	1 cut(s)	380
BstH2I	RGCGCY	1 cut(s)	526
BstHHI	GCGC	2 cut(s)	17, 525
BstKTI	GATC	3 cut(s)	52, 769, 781
BstMAI	GTCTC	2 cut(s)	171, 700
BstMBI	GATC	3 cut(s)	49, 766, 778
BstMWI	GCNNNNNNNGC	3 cut(s)	12, 476, 995
BstNI	CCWGG	1 cut(s)	543
BstNSI	RCATGY	1 cut(s)	623
BstSCI	CCNGG	2 cut(s)	199, 541
BstSLI	GKGCMC	1 cut(s)	201
BstUI	CGCG	1 cut(s)	380
BstV1I	GCAGC	3 cut(s)	28, 488, 928
BstV2I	GAAGAC	1 cut(s)	806
BstX2I	RGATCY	1 cut(s)	49
BstYI	RGATCY	1 cut(s)	49
BsuI	GTATCC	3 cut(s)	198, 398, 907
BsuRI	GGCC	1 cut(s)	722
BtsCI	GGATG	3 cut(s)	388, 698, 769
BtsI	GCAGTG	2 cut(s)	597, 898
BtsIMutI	CAGTG	4 cut(s)	127, 597, 841, 898
BveI	ACCTGC	1 cut(s)	206
Cac8I	GCNNGC	2 cut(s)	671, 859
CaiI	CAGNNNCTG	1 cut(s)	761
CciI	TCATGA	1 cut(s)	946
CfoI	GCGC	2 cut(s)	17, 525
Cfr10I	RCCGGY	1 cut(s)	1032
Cfr13I	GGNCC	1 cut(s)	265
CseI	GACGC	1 cut(s)	386
CsiI	ACCWGGT	1 cut(s)	541
Csp6I	GTAC	2 cut(s)	387, 436
CspAI	ACCGGT	1 cut(s)	1032
CviAII	CATG	7 cut(s)	173, 206, 297, 428, 586, 620, 947
CviQI	GTAC	2 cut(s)	387, 436
DdeI	CTNAG	1 cut(s)	665
DpnI	GATC	3 cut(s)	51, 768, 780
DpnII	GATC	3 cut(s)	49, 766, 778
EciI	GGCGGA	1 cut(s)	918
Ecl136II	GAGCTC	1 cut(s)	6
Eco130I	CCWWGG	2 cut(s)	31, 723
Eco24I	GRGCYC	2 cut(s)	8, 94
Eco31I	GGTCTC	1 cut(s)	700
Eco47I	GGWCC	1 cut(s)	265
Eco53kI	GAGCTC	1 cut(s)	6
Eco57I	CTGAAG	1 cut(s)	456
Eco88I	CYCGRG	1 cut(s)	1001
EcoICRI	GAGCTC	1 cut(s)	6
EcoRII	CCWGG	1 cut(s)	541
EcoT14I	CCWWGG	2 cut(s)	31, 723
EcoT38I	GRGCYC	2 cut(s)	8, 94
ErhI	CCWWGG	2 cut(s)	31, 723
FaeI	CATG	7 cut(s)	176, 209, 300, 431, 589, 623, 950
FaqI	GGGAC	1 cut(s)	278
FatI	CATG	7 cut(s)	172, 205, 296, 427, 585, 619, 946
FbaI	TGATCA	1 cut(s)	766
FblI	GTMKAC	1 cut(s)	357
Fnu4HI	GCNGC	4 cut(s)	42, 85, 477, 942
FokI	GGATG	3 cut(s)	395, 685, 756
FriOI	GRGCYC	2 cut(s)	8, 94
Fsp4HI	GCNGC	4 cut(s)	42, 85, 477, 942
FspBI	CTAG	2 cut(s)	554, 1010
GlaI	GCGC	2 cut(s)	16, 524
GluI	GCNGC	4 cut(s)	42, 85, 477, 942
GsuI	CTGGAG	2 cut(s)	78, 394
HaeII	RGCGCY	1 cut(s)	526
HaeIII	GGCC	1 cut(s)	722
HapII	CCGG	2 cut(s)	201, 1033
HgaI	GACGC	1 cut(s)	386
HhaI	GCGC	2 cut(s)	17, 525
Hin1II	CATG	7 cut(s)	176, 209, 300, 431, 589, 623, 950
Hin6I	GCGC	2 cut(s)	15, 523
HinP1I	GCGC	2 cut(s)	15, 523
HincII	GTYRAC	2 cut(s)	292, 376
HindII	GTYRAC	2 cut(s)	292, 376
HinfI	GANTC	3 cut(s)	179, 535, 828
HpaII	CCGG	2 cut(s)	201, 1033
HphI	GGTGA	3 cut(s)	739, 776, 947
Hpy166II	GTNNAC	4 cut(s)	292, 358, 376, 617
Hpy188I	TCNGA	4 cut(s)	10, 70, 275, 703
Hpy188III	TCNNGA	5 cut(s)	57, 445, 947, 1001, 1003
Hpy8I	GTNNAC	4 cut(s)	292, 358, 376, 617
HpyAV	CCTTC	3 cut(s)	340, 598, 904
HpyCH4III	ACNGT	3 cut(s)	131, 505, 628
HpyCH4V	TGCA	6 cut(s)	44, 215, 300, 680, 857, 989
HpyF10VI	GCNNNNNNNGC	3 cut(s)	12, 476, 995
HpyF3I	CTNAG	1 cut(s)	665
Hsp92II	CATG	7 cut(s)	176, 209, 300, 431, 589, 623, 950
HspAI	GCGC	2 cut(s)	15, 523
Ksp22I	TGATCA	1 cut(s)	766
Kzo9I	GATC	3 cut(s)	49, 766, 778
LmnI	GCTCC	2 cut(s)	11, 517
Lsp1109I	GCAGC	3 cut(s)	28, 488, 928
LweI	GCATC	1 cut(s)	767
MabI	ACCWGGT	1 cut(s)	541
MaeI	CTAG	2 cut(s)	554, 1010
MaeIII	GTNAC	3 cut(s)	581, 622, 895
MalI	GATC	3 cut(s)	51, 768, 780
MboI	GATC	3 cut(s)	49, 766, 778
MboII	GAAGA	3 cut(s)	239, 661, 811
MflI	RGATCY	1 cut(s)	49
MhlI	GDGCHC	3 cut(s)	8, 94, 201
MlyI	GAGTC	1 cut(s)	173
MmeI	TCCRAC	1 cut(s)	726
MnlI	CCTC	6 cut(s)	223, 316, 492, 649, 872, 999
MroXI	GAANNNNTTC	1 cut(s)	972
MseI	TTAA	1 cut(s)	366
MslI	CAYNNNNRTG	1 cut(s)	590
MspI	CCGG	2 cut(s)	201, 1033
MspR9I	CCNGG	2 cut(s)	201, 543
MvaI	CCWGG	1 cut(s)	543
MvnI	CGCG	1 cut(s)	380
MwoI	GCNNNNNNNGC	3 cut(s)	12, 476, 995
NciI	CCSGG	1 cut(s)	201
NdeII	GATC	3 cut(s)	49, 766, 778
NlaIII	CATG	7 cut(s)	176, 209, 300, 431, 589, 623, 950
NlaIV	GGNNCC	4 cut(s)	51, 198, 238, 266
NmuCI	GTSAC	2 cut(s)	581, 895
NspI	RCATGY	1 cut(s)	623
PaeR7I	CTCGAG	1 cut(s)	1001
PagI	TCATGA	1 cut(s)	946
PciI	ACATGT	1 cut(s)	619
PdmI	GAANNNNTTC	1 cut(s)	972
PfeI	GAWTC	2 cut(s)	535, 828
PinAI	ACCGGT	1 cut(s)	1032
PkrI	GCNGC	4 cut(s)	43, 86, 478, 943
PleI	GAGTC	1 cut(s)	173
PpsI	GAGTC	1 cut(s)	173
PscI	ACATGT	1 cut(s)	619
Psp124BI	GAGCTC	1 cut(s)	8
Psp6I	CCWGG	1 cut(s)	541
PspGI	CCWGG	1 cut(s)	541
PspN4I	GGNNCC	4 cut(s)	51, 198, 238, 266
PspPI	GGNCC	1 cut(s)	265
PsrI	GAACNNNNNNTAC	2 cut(s)	898, 930
PstNI	CAGNNNCTG	1 cut(s)	761
PsuI	RGATCY	1 cut(s)	49
RsaI	GTAC	2 cut(s)	388, 437
RsaNI	GTAC	2 cut(s)	387, 436
RseI	CAYNNNNRTG	1 cut(s)	590
SacI	GAGCTC	1 cut(s)	8
SaqAI	TTAA	1 cut(s)	366
SatI	GCNGC	4 cut(s)	42, 85, 477, 942
Sau3AI	GATC	3 cut(s)	49, 766, 778
Sau96I	GGNCC	1 cut(s)	265
SchI	GAGTC	1 cut(s)	173
ScrFI	CCNGG	2 cut(s)	201, 543
SduI	GDGCHC	3 cut(s)	8, 94, 201
SexAI	ACCWGGT	1 cut(s)	541
SfaNI	GCATC	1 cut(s)	767
Sfr274I	CTCGAG	1 cut(s)	1001
SinI	GGWCC	1 cut(s)	265
SlaI	CTCGAG	1 cut(s)	1001
SmiMI	CAYNNNNRTG	1 cut(s)	590
SmlI	CTYRAG	1 cut(s)	1001
SmoI	CTYRAG	1 cut(s)	1001
SsiI	CCGC	3 cut(s)	85, 380, 903
SspMI	CTAG	2 cut(s)	554, 1010
SstI	GAGCTC	1 cut(s)	8
StyD4I	CCNGG	2 cut(s)	199, 541
StyI	CCWWGG	2 cut(s)	31, 723
TaaI	ACNGT	3 cut(s)	131, 505, 628
TaqI	TCGA	3 cut(s)	647, 777, 1002
TauI	GCSGC	1 cut(s)	87
TfiI	GAWTC	2 cut(s)	535, 828
Tru1I	TTAA	1 cut(s)	366
Tru9I	TTAA	1 cut(s)	366
TscAI	CASTG	4 cut(s)	134, 597, 841, 898
TseFI	GTSAC	2 cut(s)	581, 895
TseI	GCWGC	3 cut(s)	41, 476, 941
Tsp45I	GTSAC	2 cut(s)	581, 895
TspDTI	ATGAA	5 cut(s)	444, 533, 548, 890, 963
TspGWI	ACGGA	1 cut(s)	1007
TspRI	CASTG	4 cut(s)	134, 597, 841, 898
VpaK11BI	GGWCC	1 cut(s)	265
XapI	RAATTY	3 cut(s)	77, 845, 951
XceI	RCATGY	1 cut(s)	623
XhoI	CTCGAG	1 cut(s)	1001
XmiI	GTMKAC	1 cut(s)	357
XmnI	GAANNNNTTC	1 cut(s)	972
XspI	CTAG	2 cut(s)	554, 1010

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.