Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0000770

Physical Location & Seq

Genomic Coordinates Forward (+)

60630796 .. 60633333

Gene Structure 2538 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0487500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1356 bp

ATGCCGATGTATCAGCCGCCTGGTCCGAGAAGGGTTGGGGATCTCAAGTTTGATGTGGGCGGTGGTGGGCAAGTTCTAGATCTGGAGACTGCTGTGAAAGATGGGATTCTGGGCGGCGGAGGTGGGTTAGTTTGCGGCGGCGTTGCGGCGGAGAAGTTGGATCTGAAGAAGATGATAGAAGAGCTGGAGTCCATTGAGATTCCCTCGGTGTTCATTTGCCCAATCTCATTGGAGCCAATGCAAGACCCTGTGACGCTTTGCACGGGTCAGACGTATGAGAGATCCAACATTCTCAAATGGTTTAACTTGGGGCACTATACTTGCCCCACAACAATGCAGGAGCTTTGGGACGACTCGGTCACGCCCAACAAGACCCTGCACCAGCTTATTCACAGCTGGTTTTCGCAGAAGTACTCGGCCATGAAGAAGAGGTCTGAGGATGTGCAGGGGAGGGCTTTGGAAATTTTGGAGACATTGAAGAAGGTGAAAGGCCAAGCTAGAGTTCAAGCTCTCAAGGAGCTGAGGCAGGTAGTGACGGCTCACTCTTCGGCTAAGAACACAGTGGTGGACAATGGAGGTATTGCTTTGATTTCTTCTTTATTGGGTCCTTTTACTTCGCACGCTGTTGGGTCCGAAGCAATTGGGACCCTCGTGCATTTGGACCTCAGTTCTGAGTCCAAGACGAGTCTGATGCAACCCGCAAAGATTTCGTTAATGGTTGATATGTTGAATGAGGGGTCGATTGAGACCAAGATCAATTGTACGAAATTGATTGATGTTTTGATGGAGGGCAAGGATTTGGAGTCAGAAATTGCCTCGAGTTTGAGTCTTGTGGTTGGATTGTTGAGGCTAGTGAAAGATAAGAGGCACTCGAAAGGGGTGTTGCCTGGACTGAGTTTGTTGAAGACAATTTGTTCACACGAGTCAGTCAGGAGCTCGGTTGTGAGTGTTGGGACAGTTCCTCAGGTGGTTGAGCTCTTGCCGAGCTTGAATCACGAGTGTTTGGAGCTAGCGCTTCATATCCTAGAAGTTTTGTCTACTCTTCAAGAAGGAAGAGAGGCTTTGAGATGTTGCGCCAAGACAATCCCAAGTGTGGTTGGACTGTTGATGAAGGTTTCGGAGACATGTACGCAGCTTGCATTGTCAATCTTGTGGGCTGTTTGCAAGCTCGCCCCAGACGAATGTGCTTCCGTTGCAGTTGAAGCAGGTCTAGCAGCTAAACTGCTTCTCGTGATTCAGAGTGGATGCAATCCTACACTGAAGCAAAGGGCTGCTGGGCTCTTGAAGTTGTGTAGTCTAAATTACACCACTACTACATTCATTTCCAAGTGTAAGCTTACTAGAACAATACAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

ADH_N ADH_zinc_N

Protein Analysis

451

Amino Acids

48.65

Weight (kDa)

7.1

Isoelectric Point (pI)

46.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	67 - 137	4.1e-16	U-box domain
ARM_PUB	PF25598	155 - 451	3.1e-85	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000770)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72680
fragaria_vesca	FvH4_5g10200 FvH4_5g10200 FvH4_5g10200 FvH4_5g10200 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323
malus_domestica	MD14G1142100.v1.1 MD17G1119700.v1.1 MD17G1119800.v1.1 MD17G1119900.v1.1
prunus_persica	Prupe.3G194000_v2.0.a1 Prupe.5G136800_v2.0.a1 Prupe.5G136800_v2.0.a1 Prupe.5G136800_v2.0.a1 Prupe.5G136800_v2.0.a1
pyrus_communis	pycom14g11770 pycom17g11030 pycom17g11040 pycom17g11060
rosa_chinensis	RchiOBHm_Chr2g0142921 RchiOBHm_Chr2g0155511 RchiOBHm_Chr2g0155561 RchiOBHm_Chr7g0188021 RchiOBHm_Chr7g0188031
rosa_laevigata	RLG00000004732 RLG00000020842 RLG00000020844 RLG00000020845
rosa_multiflora	Rmu_co8454251.1_g000001 Rmu_sc0003439.1_g000010 Rmu_sc0003645.1_g000002 Rmu_sc0007929.1_g000001 Rmu_ssc0000422.1_g000013 Rmu_ssc0000422.1_g000015
rosa_roxburghii	Rroxscaffold_2G00093650 Rroxscaffold_3G00266800
rosa_rugosa	Rorug02G0376800 Rorug02G0376900 Rorug02G0447500 Rorug06G0487000 Rorug06G0487000 Rorug06G0487100 Rorug06G0487200 Rorug06G0487300 Rorug06G0487400 Rorug06G0487500
rosa_samantha	Rh2AG429700 Rh2BG438800 Rh2BG524800 Rh2BG525100 Rh2CG415100 Rh2CG499200 Rh2DG448900 Rh2DG533800 Rh7BG093400 Rh7CG092600 Rh7CG092800
rosa_wichuraiana	Rw2G035120 Rw2G042240 Rw2G042250 Rw7G007930 Rw7G007940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	356
Acc36I	ACCTGC	2 cut(s)	517, 1196
AccI	GTMKAC	1 cut(s)	1037
AciI	CCGC	9 cut(s)	17, 60, 114, 117, 135, 138, 146, 149, 699
AclWI	GGATC	3 cut(s)	48, 168, 276
AcoI	YGGCCR	1 cut(s)	417
AcsI	RAATTY	1 cut(s)	462
AcuI	CTGAAG	2 cut(s)	185, 1280
AfaI	GTAC	3 cut(s)	413, 763, 1129
AfeI	AGCGCT	1 cut(s)	1014
AfiI	CCNNNNNNNGG	1 cut(s)	1093
AflIII	ACRYGT	1 cut(s)	1124
AgsI	TTSAA	8 cut(s)	478, 506, 730, 904, 991, 1046, 1202, 1285
AjnI	CCWGG	2 cut(s)	19, 886
AjuI	GAANNNNNNNTTGG	2 cut(s)	486, 518
AleI	CACNNNNGTG	1 cut(s)	563
Alw21I	GWGCWC	2 cut(s)	938, 978
Alw26I	GTCTC	4 cut(s)	80, 464, 740, 1115
AlwI	GGATC	3 cut(s)	48, 168, 276
Ama87I	CYCGRG	1 cut(s)	817
Aor51HI	AGCGCT	1 cut(s)	1014
AoxI	GGCC	2 cut(s)	417, 490
ApeKI	GCWGC	3 cut(s)	1132, 1214, 1271
ApoI	RAATTY	1 cut(s)	462
AspLEI	GCGC	2 cut(s)	1015, 1076
AspS9I	GGNCC	5 cut(s)	23, 605, 630, 645, 661
AsuHPI	GGTGA	1 cut(s)	496
AsuNHI	GCTAGC	1 cut(s)	1009
AvaI	CYCGRG	1 cut(s)	817
AvaII	GGWCC	5 cut(s)	23, 605, 630, 645, 661
AxyI	CCTNAGG	1 cut(s)	963
BaeGI	GKGCMC	1 cut(s)	315
BanII	GRGCYC	3 cut(s)	938, 978, 1281
BauI	CACGAG	4 cut(s)	650, 920, 995, 1229
BbsI	GAAGAC	1 cut(s)	911
Bbv12I	GWGCWC	2 cut(s)	938, 978
BbvCI	CCTCAGC	1 cut(s)	521
BbvI	GCAGC	3 cut(s)	1144, 1226, 1258
BccI	CCATC	2 cut(s)	95, 778
BceAI	ACGGC	1 cut(s)	552
BcgI	CGANNNNNNTGC	4 cut(s)	673, 690, 707, 724
BciT130I	CCWGG	2 cut(s)	21, 888
BcoDI	GTCTC	4 cut(s)	80, 464, 740, 1115
BfaI	CTAG	7 cut(s)	77, 498, 851, 1010, 1025, 1211, 1341
BfoI	RGCGCY	1 cut(s)	1016
BfuAI	ACCTGC	2 cut(s)	517, 1196
BglII	AGATCT	1 cut(s)	79
BisI	GCNGC	8 cut(s)	17, 115, 136, 139, 147, 1133, 1215, 1272
BlsI	GCNGC	8 cut(s)	18, 116, 137, 140, 148, 1134, 1216, 1273
BmcAI	AGTACT	1 cut(s)	413
Bme1390I	CCNGG	2 cut(s)	21, 888
Bme18I	GGWCC	5 cut(s)	23, 605, 630, 645, 661
BmeT110I	CYCGRG	1 cut(s)	817
BmgT120I	GGNCC	5 cut(s)	23, 605, 630, 645, 661
BmiI	GGNNCC	5 cut(s)	234, 606, 631, 646, 647
BmrFI	CCNGG	2 cut(s)	21, 888
BmsI	GCATC	2 cut(s)	681, 1235
BmtI	GCTAGC	1 cut(s)	1013
BpiI	GAAGAC	1 cut(s)	911
BplI	GAGNNNNNCTC	2 cut(s)	188, 220
BpmI	CTGGAG	2 cut(s)	104, 206
Bpu10I	CCTNAGC	1 cut(s)	521
BpuEI	CTTGAG	2 cut(s)	29, 497
BsaI	GGTCTC	1 cut(s)	740
BsaJI	CCNNGG	1 cut(s)	204
Bsc4I	CCNNNNNNNGG	1 cut(s)	1093
Bse21I	CCTNAGG	1 cut(s)	963
BseBI	CCWGG	2 cut(s)	21, 888
BseDI	CCNNGG	1 cut(s)	204
BseGI	GGATG	2 cut(s)	445, 1250
BseLI	CCNNNNNNNGG	1 cut(s)	1093
BseMII	CTCAG	6 cut(s)	426, 512, 663, 679, 884, 977
BseSI	GKGCMC	1 cut(s)	315
BseXI	GCAGC	3 cut(s)	1144, 1226, 1258
BseYI	CCCAGC	1 cut(s)	1274
BsgI	GTGCAG	2 cut(s)	362, 464
BshFI	GGCC	2 cut(s)	419, 492
BsiHKAI	GWGCWC	2 cut(s)	938, 978
BsiHKCI	CYCGRG	1 cut(s)	817
BslFI	GGGAC	3 cut(s)	362, 658, 967
BslI	CCNNNNNNNGG	1 cut(s)	1093
BsmAI	GTCTC	4 cut(s)	80, 464, 740, 1115
BsmFI	GGGAC	3 cut(s)	362, 658, 967
BsnI	GGCC	2 cut(s)	419, 492
Bso31I	GGTCTC	1 cut(s)	740
BsoBI	CYCGRG	1 cut(s)	817
Bsp1286I	GDGCHC	4 cut(s)	315, 938, 978, 1281
Bsp143I	GATC	5 cut(s)	40, 79, 160, 281, 753
BspACI	CCGC	9 cut(s)	17, 60, 114, 117, 135, 138, 146, 149, 699
BspANI	GGCC	2 cut(s)	419, 492
BspCNI	CTCAG	6 cut(s)	427, 513, 664, 678, 885, 976
BspLI	GGNNCC	5 cut(s)	234, 606, 631, 646, 647
BspMI	ACCTGC	2 cut(s)	517, 1196
BspOI	GCTAGC	1 cut(s)	1013
BspPI	GGATC	3 cut(s)	48, 168, 276
BspQI	GCTCTTC	1 cut(s)	174
BspTNI	GGTCTC	1 cut(s)	740
BssECI	CCNNGG	1 cut(s)	204
BssMI	GATC	5 cut(s)	40, 79, 160, 281, 753
BssSI	CACGAG	4 cut(s)	650, 920, 995, 1229
Bst2BI	CACGAG	4 cut(s)	650, 920, 995, 1229
Bst2UI	CCWGG	2 cut(s)	21, 888
Bst4CI	ACNGT	3 cut(s)	562, 958, 1104
Bst6I	CTCTTC	5 cut(s)	174, 422, 550, 1047, 1048
BstC8I	GCNNGC	5 cut(s)	621, 1011, 1137, 1166, 1170
BstDEI	CTNAG	7 cut(s)	435, 521, 552, 665, 672, 893, 963
BstF5I	GGATG	2 cut(s)	445, 1250
BstH2I	RGCGCY	1 cut(s)	1016
BstHHI	GCGC	2 cut(s)	1015, 1076
BstKTI	GATC	5 cut(s)	43, 82, 163, 284, 756
BstMAI	GTCTC	4 cut(s)	80, 464, 740, 1115
BstMBI	GATC	5 cut(s)	40, 79, 160, 281, 753
BstMWI	GCNNNNNNNGC	3 cut(s)	1193, 1202, 1211
BstNI	CCWGG	2 cut(s)	21, 888
BstNSI	RCATGY	1 cut(s)	1128
BstSCI	CCNGG	2 cut(s)	19, 886
BstSLI	GKGCMC	1 cut(s)	315
BstV1I	GCAGC	3 cut(s)	1144, 1226, 1258
BstV2I	GAAGAC	1 cut(s)	911
BstX2I	RGATCY	4 cut(s)	40, 79, 160, 281
BstYI	RGATCY	4 cut(s)	40, 79, 160, 281
Bsu36I	CCTNAGG	1 cut(s)	963
BsuRI	GGCC	2 cut(s)	419, 492
BtsCI	GGATG	2 cut(s)	445, 1250
BtsIMutI	CAGTG	2 cut(s)	567, 1256
BveI	ACCTGC	2 cut(s)	517, 1196
Cac8I	GCNNGC	5 cut(s)	621, 1011, 1137, 1166, 1170
CfoI	GCGC	2 cut(s)	1015, 1076
Cfr13I	GGNCC	5 cut(s)	23, 605, 630, 645, 661
CseI	GACGC	1 cut(s)	262
Csp6I	GTAC	3 cut(s)	412, 762, 1128
CviAII	CATG	2 cut(s)	421, 1125
CviQI	GTAC	3 cut(s)	412, 762, 1128
DdeI	CTNAG	7 cut(s)	435, 521, 552, 665, 672, 893, 963
DpnI	GATC	5 cut(s)	42, 81, 162, 283, 755
DpnII	GATC	5 cut(s)	40, 79, 160, 281, 753
DrdI	GACNNNNNNGTC	1 cut(s)	356
DseDI	GACNNNNNNGTC	1 cut(s)	356
EaeI	YGGCCR	1 cut(s)	417
Eam1104I	CTCTTC	5 cut(s)	174, 422, 550, 1047, 1048
EarI	CTCTTC	5 cut(s)	174, 422, 550, 1047, 1048
EciI	GGCGGA	2 cut(s)	132, 164
Ecl136II	GAGCTC	2 cut(s)	936, 976
Eco24I	GRGCYC	3 cut(s)	938, 978, 1281
Eco31I	GGTCTC	1 cut(s)	740
Eco47I	GGWCC	5 cut(s)	23, 605, 630, 645, 661
Eco47III	AGCGCT	1 cut(s)	1014
Eco53kI	GAGCTC	2 cut(s)	936, 976
Eco57I	CTGAAG	2 cut(s)	185, 1280
Eco81I	CCTNAGG	1 cut(s)	963
Eco88I	CYCGRG	1 cut(s)	817
EcoICRI	GAGCTC	2 cut(s)	936, 976
EcoO109I	RGGNCCY	2 cut(s)	605, 645
EcoRII	CCWGG	2 cut(s)	19, 886
EcoT38I	GRGCYC	3 cut(s)	938, 978, 1281
FaeI	CATG	2 cut(s)	424, 1128
FaiI	YATR	6 cut(s)	276, 318, 422, 725, 1020, 1126
FalI	AAGNNNNNCTT	2 cut(s)	1045, 1077
FaqI	GGGAC	3 cut(s)	362, 658, 967
FatI	CATG	2 cut(s)	420, 1124
FauI	CCCGC	1 cut(s)	706
FblI	GTMKAC	1 cut(s)	1037
Fnu4HI	GCNGC	8 cut(s)	17, 115, 136, 139, 147, 1133, 1215, 1272
FokI	GGATG	2 cut(s)	452, 1257
FriOI	GRGCYC	3 cut(s)	938, 978, 1281
Fsp4HI	GCNGC	8 cut(s)	17, 115, 136, 139, 147, 1133, 1215, 1272
FspBI	CTAG	7 cut(s)	77, 498, 851, 1010, 1025, 1211, 1341
GlaI	GCGC	2 cut(s)	1014, 1075
GluI	GCNGC	8 cut(s)	17, 115, 136, 139, 147, 1133, 1215, 1272
GsaI	CCCAGC	1 cut(s)	1278
GsuI	CTGGAG	2 cut(s)	104, 206
HaeII	RGCGCY	1 cut(s)	1016
HaeIII	GGCC	2 cut(s)	419, 492
HgaI	GACGC	1 cut(s)	262
HhaI	GCGC	2 cut(s)	1015, 1076
Hin1II	CATG	2 cut(s)	424, 1128
Hin6I	GCGC	2 cut(s)	1013, 1074
HinP1I	GCGC	2 cut(s)	1013, 1074
HindIII	AAGCTT	1 cut(s)	1334
HphI	GGTGA	1 cut(s)	496
Hpy166II	GTNNAC	3 cut(s)	568, 917, 1038
Hpy188III	TCNNGA	7 cut(s)	77, 83, 931, 995, 1046, 1231, 1282
Hpy8I	GTNNAC	3 cut(s)	568, 917, 1038
HpyAV	CCTTC	4 cut(s)	24, 475, 1043, 1105
HpyCH4III	ACNGT	3 cut(s)	562, 958, 1104
HpyCH4IV	ACGT	1 cut(s)	272
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1193, 1202, 1211
HpyF3I	CTNAG	7 cut(s)	435, 521, 552, 665, 672, 893, 963
HpySE526I	ACGT	1 cut(s)	272
Hsp92II	CATG	2 cut(s)	424, 1128
HspAI	GCGC	2 cut(s)	1013, 1074
KflI	GGGWCCC	1 cut(s)	645
Kzo9I	GATC	5 cut(s)	40, 79, 160, 281, 753
LguI	GCTCTTC	1 cut(s)	174
LmnI	GCTCC	5 cut(s)	232, 340, 517, 933, 1006
Lsp1109I	GCAGC	3 cut(s)	1144, 1226, 1258
LweI	GCATC	2 cut(s)	681, 1235
MaeI	CTAG	7 cut(s)	77, 498, 851, 1010, 1025, 1211, 1341
MaeII	ACGT	1 cut(s)	272
MaeIII	GTNAC	3 cut(s)	250, 358, 532
MalI	GATC	5 cut(s)	42, 81, 162, 283, 755
MboI	GATC	5 cut(s)	40, 79, 160, 281, 753
MfeI	CAATTG	2 cut(s)	639, 757
MflI	RGATCY	4 cut(s)	40, 79, 160, 281
MhlI	GDGCHC	4 cut(s)	315, 938, 978, 1281
MluCI	AATT	7 cut(s)	462, 639, 757, 767, 810, 909, 1300
MlyI	GAGTC	7 cut(s)	197, 347, 683, 694, 812, 835, 932
MmeI	TCCRAC	4 cut(s)	138, 309, 817, 1078
MseI	TTAA	2 cut(s)	303, 713
MslI	CAYNNNNRTG	2 cut(s)	332, 563
MspA1I	CMGCKG	1 cut(s)	396
MspR9I	CCNGG	2 cut(s)	21, 888
MunI	CAATTG	2 cut(s)	639, 757
MvaI	CCWGG	2 cut(s)	21, 888
MwoI	GCNNNNNNNGC	3 cut(s)	1193, 1202, 1211
NdeII	GATC	5 cut(s)	40, 79, 160, 281, 753
NheI	GCTAGC	1 cut(s)	1009
NlaIII	CATG	2 cut(s)	424, 1128
NlaIV	GGNNCC	5 cut(s)	234, 606, 631, 646, 647
NmeAIII	GCCGAG	2 cut(s)	395, 1008
NmuCI	GTSAC	3 cut(s)	250, 358, 532
NspI	RCATGY	1 cut(s)	1128
OliI	CACNNNNGTG	1 cut(s)	563
PaeR7I	CTCGAG	1 cut(s)	817
PciI	ACATGT	1 cut(s)	1124
PciSI	GCTCTTC	1 cut(s)	174
PcsI	WCGNNNNNNNCGW	2 cut(s)	269, 1176
PfeI	GAWTC	4 cut(s)	106, 199, 991, 1234
PflFI	GACNNNGTC	1 cut(s)	356
PkrI	GCNGC	8 cut(s)	18, 116, 137, 140, 148, 1134, 1216, 1273
PleI	GAGTC	7 cut(s)	196, 347, 682, 693, 811, 834, 931
PpsI	GAGTC	7 cut(s)	196, 347, 682, 693, 811, 834, 931
PpuMI	RGGWCCY	2 cut(s)	605, 645
PscI	ACATGT	1 cut(s)	1124
Psp124BI	GAGCTC	2 cut(s)	938, 978
Psp5II	RGGWCCY	2 cut(s)	605, 645
Psp6I	CCWGG	2 cut(s)	19, 886
PspFI	CCCAGC	1 cut(s)	1274
PspGI	CCWGG	2 cut(s)	19, 886
PspN4I	GGNNCC	5 cut(s)	234, 606, 631, 646, 647
PspPI	GGNCC	5 cut(s)	23, 605, 630, 645, 661
PspPPI	RGGWCCY	2 cut(s)	605, 645
PspXI	VCTCGAGB	1 cut(s)	817
PsuI	RGATCY	4 cut(s)	40, 79, 160, 281
PsyI	GACNNNGTC	1 cut(s)	356
PvuII	CAGCTG	1 cut(s)	396
RsaI	GTAC	3 cut(s)	413, 763, 1129
RsaNI	GTAC	3 cut(s)	412, 762, 1128
RseI	CAYNNNNRTG	2 cut(s)	332, 563
SacI	GAGCTC	2 cut(s)	938, 978
SapI	GCTCTTC	1 cut(s)	174
SaqAI	TTAA	2 cut(s)	303, 713
SatI	GCNGC	8 cut(s)	17, 115, 136, 139, 147, 1133, 1215, 1272
Sau3AI	GATC	5 cut(s)	40, 79, 160, 281, 753
Sau96I	GGNCC	5 cut(s)	23, 605, 630, 645, 661
ScaI	AGTACT	1 cut(s)	413
SchI	GAGTC	7 cut(s)	197, 347, 683, 694, 812, 835, 932
ScrFI	CCNGG	2 cut(s)	21, 888
SduI	GDGCHC	4 cut(s)	315, 938, 978, 1281
SfaNI	GCATC	2 cut(s)	681, 1235
Sfr274I	CTCGAG	1 cut(s)	817
SinI	GGWCC	5 cut(s)	23, 605, 630, 645, 661
SlaI	CTCGAG	1 cut(s)	817
SmiMI	CAYNNNNRTG	2 cut(s)	332, 563
SmlI	CTYRAG	3 cut(s)	44, 512, 817
SmoI	CTYRAG	3 cut(s)	44, 512, 817
Sse9I	AATT	7 cut(s)	462, 639, 757, 767, 810, 909, 1300
SsiI	CCGC	9 cut(s)	17, 60, 114, 117, 135, 138, 146, 149, 699
SspMI	CTAG	7 cut(s)	77, 498, 851, 1010, 1025, 1211, 1341
SstI	GAGCTC	2 cut(s)	938, 978
StyD4I	CCNGG	2 cut(s)	19, 886
TaaI	ACNGT	3 cut(s)	562, 958, 1104
TaiI	ACGT	1 cut(s)	275
TaqI	TCGA	3 cut(s)	740, 818, 872
TaqII	GACCGA	1 cut(s)	346
TasI	AATT	7 cut(s)	462, 639, 757, 767, 810, 909, 1300
TatI	WGTACW	1 cut(s)	411
TauI	GCSGC	5 cut(s)	19, 117, 138, 141, 149
TfiI	GAWTC	4 cut(s)	106, 199, 991, 1234
Tru1I	TTAA	2 cut(s)	303, 713
Tru9I	TTAA	2 cut(s)	303, 713
TscAI	CASTG	2 cut(s)	567, 1263
TseFI	GTSAC	3 cut(s)	250, 358, 532
TseI	GCWGC	3 cut(s)	1132, 1214, 1271
Tsp45I	GTSAC	3 cut(s)	250, 358, 532
TspDTI	ATGAA	5 cut(s)	202, 437, 1007, 1124, 1309
TspGWI	ACGGA	1 cut(s)	1180
TspRI	CASTG	2 cut(s)	567, 1263
Tth111I	GACNNNGTC	1 cut(s)	356
VpaK11BI	GGWCC	5 cut(s)	23, 605, 630, 645, 661
XapI	RAATTY	1 cut(s)	462
XbaI	TCTAGA	1 cut(s)	76
XceI	RCATGY	1 cut(s)	1128
XhoI	CTCGAG	1 cut(s)	817
XmiI	GTMKAC	1 cut(s)	1037
XspI	CTAG	7 cut(s)	77, 498, 851, 1010, 1025, 1211, 1341
ZrmI	AGTACT	1 cut(s)	413

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.