Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0000770

Physical Location & Seq

Genomic Coordinates Forward (+)

60623690 .. 60625534

Gene Structure 1845 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0487400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1293 bp

ATGAAGAAGCAGCTAGGATTACTGGTTTCGATGGCTGTGATGATGTACACGTGCCAAGCAGTTAGCAACCTCCACCCTGTGATCCTAATACCTGGAAATGGCGGGAATCAGTTGGAAGCGAGACTAACCCCCGATTACAAGCCCAGTAGTTTGGTATGCAACCGTTGGTACCCGATTGAGAGGGACAAGGAGGGTTGGTTCAGGCTGTGGTTCGACCCGACTGTTCTGTTAGCTCCGTTCACTACTTGCTTTGCTCAGAGGATGACGCTCTATTACGACCAGGATAAAGATGATTACCACAATGCCCCTGGGGTTGAAACCAGAGTCCCCCACTTCGGGTCCATTCAGTCCCTTCTGTTCCTTGACCCCAATCTCAAGAAGATCACAACATACATGGCACCCCTAGTGGAATCATTGGAGAATATTGGCTATGTCGATGGCAAAACCATGTTCGGAGCTCCATACGATTTTCGATATGGTTTAGCACCTAAAGACCACCCATCCCATGTTGGTTCTAAGTTCCTGAAAGACCTAAAAGACTTGGTCGAAAAGGCCAGCAATTCTAATGGAGGAAAGCCGGTGATACTTGTCTCGCACAGCTTAGGAGGCCTCTTTGCTCTCCAACTTCTGAATCGAAACAAGCCCTCATGGCGCCAAAAGTTCATCAAACACTTTGTTGCACTCTCAGCACCGTGGGGTGGGACTGTGGACGAAATGCTCACCTTTGCTTCAGGGAACACACTAGGAGTGCCACTGGTGAATCCATTGCTCGTAAGAGAAGAGCAGAGGAGCTCAGAAAGCAACTTATGGCTAATGCCTAATCCTAGATTATTCAGGAGCAAAAAACCAATAGTGATCACCCCAGATGCTACATATTCAGCTCAAAACATTCCCCAATTCCTCAATGACATTGGATTTCCCGAAGGAATTCATCCCTTCAAAACGCGCATTTTGGTCTTGATGGATCAGCTTGAAGCTCCTGGGGTGCCTCTTACTTGTGTTATTGGGACCGGTGTGAGGACAGCAGAGACTTTGTTCTATGACAAAAGAGGCTTTGATGAGCAACCGGAGATTGTTTACGGGGATGGAGATGGAACTGTGAACATGTTGAGCTTGTTAGGACATGAATCACTGTGGTCCAATGCGGAAAATCAAACTCTGAAAACGATTAGAGTTCCTGGGGTGACTCATACCGCGATACTCAAAGATGATGGTGCACTTGGTGAAGTGGTTAGAGAAATCTCTGGAATTAATTCTCAGTTCATGTTTGTTGAGCATGTAAATGTGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

ADH_N ADH_zinc_N

Protein Analysis

430

Amino Acids

48.04

Weight (kDa)

6.42

Isoelectric Point (pI)

37.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LCAT	PF02450	67 - 303	3.6e-42	Lecithin:cholesterol acyltransferase
Hydrolase_4	PF12146	172 - 222	5.5e-07	Serine aminopeptidase, S33
Abhydrolase_6	PF12697	172 - 305	1e-05	Alpha/beta hydrolase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000770)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72680
fragaria_vesca	FvH4_5g10200 FvH4_5g10200 FvH4_5g10200 FvH4_5g10200 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323 FvH4_6g40323
malus_domestica	MD14G1142100.v1.1 MD17G1119700.v1.1 MD17G1119800.v1.1 MD17G1119900.v1.1
prunus_persica	Prupe.3G194000_v2.0.a1 Prupe.5G136800_v2.0.a1 Prupe.5G136800_v2.0.a1 Prupe.5G136800_v2.0.a1 Prupe.5G136800_v2.0.a1
pyrus_communis	pycom14g11770 pycom17g11030 pycom17g11040 pycom17g11060
rosa_chinensis	RchiOBHm_Chr2g0142921 RchiOBHm_Chr2g0155511 RchiOBHm_Chr2g0155561 RchiOBHm_Chr7g0188021 RchiOBHm_Chr7g0188031
rosa_laevigata	RLG00000004732 RLG00000020842 RLG00000020844 RLG00000020845
rosa_multiflora	Rmu_co8454251.1_g000001 Rmu_sc0003439.1_g000010 Rmu_sc0003645.1_g000002 Rmu_sc0007929.1_g000001 Rmu_ssc0000422.1_g000013 Rmu_ssc0000422.1_g000015
rosa_roxburghii	Rroxscaffold_2G00093650 Rroxscaffold_3G00266800
rosa_rugosa	Rorug02G0376800 Rorug02G0376900 Rorug02G0447500 Rorug06G0487000 Rorug06G0487000 Rorug06G0487100 Rorug06G0487200 Rorug06G0487300 Rorug06G0487400 Rorug06G0487500
rosa_samantha	Rh2AG429700 Rh2BG438800 Rh2BG524800 Rh2BG525100 Rh2CG415100 Rh2CG499200 Rh2DG448900 Rh2DG533800 Rh7BG093400 Rh7CG092600 Rh7CG092800
rosa_wichuraiana	Rw2G035120 Rw2G042240 Rw2G042250 Rw7G007930 Rw7G007940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	168
AccB1I	GGYRCC	4 cut(s)	168, 397, 651, 985
AccII	CGCG	2 cut(s)	946, 1196
AciI	CCGC	3 cut(s)	102, 1145, 1194
AclWI	GGATC	2 cut(s)	76, 972
AcsI	RAATTY	1 cut(s)	927
AcuI	CTGAAG	1 cut(s)	714
AcvI	CACGTG	1 cut(s)	51
AcyI	GRCGYC	1 cut(s)	652
AdeI	CACNNNGTG	2 cut(s)	79, 1223
AfaI	GTAC	2 cut(s)	47, 170
AfiI	CCNNNNNNNGG	5 cut(s)	98, 335, 336, 698, 1017
AflIII	ACRYGT	2 cut(s)	48, 1104
AgeI	ACCGGT	1 cut(s)	1010
AgsI	TTSAA	3 cut(s)	317, 940, 974
AjnI	CCWGG	5 cut(s)	91, 279, 307, 979, 1177
AloI	GAACNNNNNNTCC	2 cut(s)	182, 214
AluBI	AGCT	9 cut(s)	13, 233, 458, 600, 792, 881, 970, 977, 1113
AluI	AGCT	9 cut(s)	13, 233, 458, 600, 792, 881, 970, 977, 1113
Alw21I	GWGCWC	3 cut(s)	460, 794, 1219
Alw26I	GTCTC	3 cut(s)	115, 595, 1022
Alw44I	GTGCAC	1 cut(s)	1215
AlwI	GGATC	2 cut(s)	76, 972
AoxI	GGCC	2 cut(s)	552, 607
ApaLI	GTGCAC	1 cut(s)	1215
ApeKI	GCWGC	1 cut(s)	10
ApoI	RAATTY	1 cut(s)	927
AseI	ATTAAT	1 cut(s)	1251
AsiGI	ACCGGT	1 cut(s)	1010
Asp700I	GAANNNNTTC	2 cut(s)	927, 1252
Asp718I	GGTACC	1 cut(s)	168
AspLEI	GCGC	2 cut(s)	654, 948
AspS9I	GGNCC	3 cut(s)	339, 1008, 1137
AsuHPI	GGTGA	6 cut(s)	592, 712, 769, 850, 1195, 1235
AvaII	GGWCC	3 cut(s)	339, 1008, 1137
BaeGI	GKGCMC	1 cut(s)	1219
BanI	GGYRCC	4 cut(s)	168, 397, 651, 985
BanII	GRGCYC	2 cut(s)	460, 794
BbrPI	CACGTG	1 cut(s)	51
Bbv12I	GWGCWC	3 cut(s)	460, 794, 1219
BbvI	GCAGC	1 cut(s)	22
BccI	CCATC	7 cut(s)	25, 431, 508, 955, 1079, 1085, 1205
BciT130I	CCWGG	5 cut(s)	93, 281, 309, 981, 1179
BclI	TGATCA	1 cut(s)	855
BcoDI	GTCTC	3 cut(s)	115, 595, 1022
BfaI	CTAG	4 cut(s)	14, 404, 743, 825
BfoI	RGCGCY	1 cut(s)	655
BglI	GCCNNNNNGGC	1 cut(s)	649
BisI	GCNGC	1 cut(s)	11
BlsI	GCNGC	1 cut(s)	12
Bme1390I	CCNGG	5 cut(s)	93, 281, 309, 981, 1179
Bme18I	GGWCC	3 cut(s)	339, 1008, 1137
BmgT120I	GGNCC	3 cut(s)	339, 1008, 1137
BmiI	GGNNCC	6 cut(s)	170, 340, 399, 653, 987, 1009
BmrFI	CCNGG	5 cut(s)	93, 281, 309, 981, 1179
BmrI	ACTGGG	1 cut(s)	138
BmsI	GCATC	1 cut(s)	856
BmuI	ACTGGG	1 cut(s)	138
Bpu10I	CCTNAGC	1 cut(s)	601
BpuEI	CTTGAG	1 cut(s)	359
BsaAI	YACGTR	1 cut(s)	51
BsaHI	GRCGYC	1 cut(s)	652
BsaJI	CCNNGG	5 cut(s)	307, 308, 692, 980, 1178
BsaWI	WCCGGW	2 cut(s)	1010, 1066
BsaXI	ACNNNNNCTCC	2 cut(s)	182, 212
Bsc4I	CCNNNNNNNGG	5 cut(s)	98, 335, 336, 698, 1017
Bse118I	RCCGGY	2 cut(s)	577, 1010
Bse1I	ACTGG	3 cut(s)	27, 144, 759
Bse3DI	GCAATG	1 cut(s)	764
BseBI	CCWGG	5 cut(s)	93, 281, 309, 981, 1179
BseDI	CCNNGG	5 cut(s)	307, 308, 692, 980, 1178
BseGI	GGATG	4 cut(s)	267, 500, 931, 1090
BseLI	CCNNNNNNNGG	5 cut(s)	98, 335, 336, 698, 1017
BseMI	GCAATG	1 cut(s)	764
BseMII	CTCAG	4 cut(s)	269, 699, 807, 1271
BseNI	ACTGG	3 cut(s)	27, 144, 759
BseRI	GAGGAG	1 cut(s)	802
BseSI	GKGCMC	1 cut(s)	1219
BseXI	GCAGC	1 cut(s)	22
Bsh1236I	CGCG	2 cut(s)	946, 1196
BshFI	GGCC	2 cut(s)	554, 609
BshNI	GGYRCC	4 cut(s)	168, 397, 651, 985
BshTI	ACCGGT	1 cut(s)	1010
BsiHKAI	GWGCWC	3 cut(s)	460, 794, 1219
BsiSI	CCGG	3 cut(s)	578, 1011, 1067
BslFI	GGGAC	5 cut(s)	197, 311, 334, 715, 1021
BslI	CCNNNNNNNGG	5 cut(s)	98, 335, 336, 698, 1017
BsmAI	GTCTC	3 cut(s)	115, 595, 1022
BsmFI	GGGAC	5 cut(s)	197, 311, 334, 715, 1021
BsnI	GGCC	2 cut(s)	554, 609
Bsp1286I	GDGCHC	3 cut(s)	460, 794, 1219
Bsp1407I	TGTACA	1 cut(s)	45
Bsp143I	GATC	4 cut(s)	81, 381, 855, 964
BspACI	CCGC	3 cut(s)	102, 1145, 1194
BspANI	GGCC	2 cut(s)	554, 609
BspCNI	CTCAG	4 cut(s)	268, 698, 806, 1270
BspFNI	CGCG	2 cut(s)	946, 1196
BspLI	GGNNCC	6 cut(s)	170, 340, 399, 653, 987, 1009
BspPI	GGATC	2 cut(s)	76, 972
BspQI	GCTCTTC	1 cut(s)	774
BspT107I	GGYRCC	4 cut(s)	168, 397, 651, 985
BsrDI	GCAATG	1 cut(s)	764
BsrFI	RCCGGY	2 cut(s)	577, 1010
BsrGI	TGTACA	1 cut(s)	45
BsrI	ACTGG	3 cut(s)	27, 144, 759
BssAI	RCCGGY	2 cut(s)	577, 1010
BssECI	CCNNGG	5 cut(s)	307, 308, 692, 980, 1178
BssMI	GATC	4 cut(s)	81, 381, 855, 964
BssNI	GRCGYC	1 cut(s)	652
Bst2UI	CCWGG	5 cut(s)	93, 281, 309, 981, 1179
Bst4CI	ACNGT	6 cut(s)	164, 223, 693, 706, 1099, 1134
Bst6I	CTCTTC	1 cut(s)	774
BstACI	GRCGYC	1 cut(s)	652
BstAUI	TGTACA	1 cut(s)	45
BstBAI	YACGTR	1 cut(s)	51
BstC8I	GCNNGC	1 cut(s)	556
BstDEI	CTNAG	6 cut(s)	255, 516, 601, 685, 793, 1257
BstDSI	CCRYGG	1 cut(s)	692
BstF5I	GGATG	4 cut(s)	267, 500, 931, 1090
BstFNI	CGCG	2 cut(s)	946, 1196
BstH2I	RGCGCY	1 cut(s)	655
BstHHI	GCGC	2 cut(s)	654, 948
BstKTI	GATC	4 cut(s)	84, 384, 858, 967
BstMAI	GTCTC	3 cut(s)	115, 595, 1022
BstMBI	GATC	4 cut(s)	81, 381, 855, 964
BstMWI	GCNNNNNNNGC	4 cut(s)	606, 649, 686, 798
BstNI	CCWGG	5 cut(s)	93, 281, 309, 981, 1179
BstNSI	RCATGY	2 cut(s)	1108, 1280
BstSCI	CCNGG	5 cut(s)	91, 279, 307, 979, 1177
BstSLI	GKGCMC	1 cut(s)	1219
BstUI	CGCG	2 cut(s)	946, 1196
BstV1I	GCAGC	1 cut(s)	22
BstXI	CCANNNNNNTGG	1 cut(s)	151
BsuRI	GGCC	2 cut(s)	554, 609
BtgI	CCRYGG	1 cut(s)	692
BtsCI	GGATG	4 cut(s)	267, 500, 931, 1090
BtsIMutI	CAGTG	2 cut(s)	752, 1130
Cac8I	GCNNGC	1 cut(s)	556
CfoI	GCGC	2 cut(s)	654, 948
Cfr10I	RCCGGY	2 cut(s)	577, 1010
Cfr13I	GGNCC	3 cut(s)	339, 1008, 1137
CseI	GACGC	1 cut(s)	274
Csp6I	GTAC	2 cut(s)	46, 169
CspAI	ACCGGT	1 cut(s)	1010
CviAII	CATG	8 cut(s)	394, 448, 506, 648, 1105, 1124, 1264, 1277
CviQI	GTAC	2 cut(s)	46, 169
DdeI	CTNAG	6 cut(s)	255, 516, 601, 685, 793, 1257
DinI	GGCGCC	1 cut(s)	653
DpnI	GATC	4 cut(s)	83, 383, 857, 966
DpnII	GATC	4 cut(s)	81, 381, 855, 964
DraIII	CACNNNGTG	2 cut(s)	79, 1223
Eam1104I	CTCTTC	1 cut(s)	774
EarI	CTCTTC	1 cut(s)	774
Ecl136II	GAGCTC	2 cut(s)	458, 792
Eco147I	AGGCCT	1 cut(s)	609
Eco24I	GRGCYC	2 cut(s)	460, 794
Eco47I	GGWCC	3 cut(s)	339, 1008, 1137
Eco53kI	GAGCTC	2 cut(s)	458, 792
Eco57I	CTGAAG	1 cut(s)	714
Eco72I	CACGTG	1 cut(s)	51
EcoICRI	GAGCTC	2 cut(s)	458, 792
EcoRI	GAATTC	1 cut(s)	927
EcoRII	CCWGG	5 cut(s)	91, 279, 307, 979, 1177
EcoT38I	GRGCYC	2 cut(s)	460, 794
EgeI	GGCGCC	1 cut(s)	653
EheI	GGCGCC	1 cut(s)	653
FaeI	CATG	8 cut(s)	397, 451, 509, 651, 1108, 1127, 1267, 1280
FaqI	GGGAC	5 cut(s)	197, 311, 334, 715, 1021
FatI	CATG	8 cut(s)	393, 447, 505, 647, 1104, 1123, 1263, 1276
FauI	CCCGC	1 cut(s)	95
FbaI	TGATCA	1 cut(s)	855
Fnu4HI	GCNGC	1 cut(s)	11
FokI	GGATG	4 cut(s)	274, 487, 918, 1097
FriOI	GRGCYC	2 cut(s)	460, 794
Fsp4HI	GCNGC	1 cut(s)	11
FspBI	CTAG	4 cut(s)	14, 404, 743, 825
GlaI	GCGC	2 cut(s)	653, 947
GluI	GCNGC	1 cut(s)	11
HaeII	RGCGCY	1 cut(s)	655
HaeIII	GGCC	2 cut(s)	554, 609
HapII	CCGG	3 cut(s)	578, 1011, 1067
HgaI	GACGC	1 cut(s)	274
HhaI	GCGC	2 cut(s)	654, 948
Hin1I	GRCGYC	1 cut(s)	652
Hin1II	CATG	8 cut(s)	397, 451, 509, 651, 1108, 1127, 1267, 1280
Hin6I	GCGC	2 cut(s)	652, 946
HinP1I	GCGC	2 cut(s)	652, 946
HinfI	GANTC	7 cut(s)	106, 324, 410, 631, 760, 1127, 1186
HpaII	CCGG	3 cut(s)	578, 1011, 1067
HphI	GGTGA	6 cut(s)	592, 712, 769, 850, 1195, 1235
Hpy166II	GTNNAC	6 cut(s)	48, 240, 709, 1078, 1102, 1217
Hpy188I	TCNGA	5 cut(s)	258, 455, 630, 796, 1161
Hpy188III	TCNNGA	6 cut(s)	376, 523, 835, 920, 958, 1245
Hpy8I	GTNNAC	6 cut(s)	48, 240, 709, 1078, 1102, 1217
HpyAV	CCTTC	3 cut(s)	362, 917, 946
HpyCH4III	ACNGT	6 cut(s)	164, 223, 693, 706, 1099, 1134
HpyCH4IV	ACGT	1 cut(s)	50
HpyCH4V	TGCA	4 cut(s)	159, 680, 1217, 1288
HpyF10VI	GCNNNNNNNGC	4 cut(s)	606, 649, 686, 798
HpyF3I	CTNAG	6 cut(s)	255, 516, 601, 685, 793, 1257
HpySE526I	ACGT	1 cut(s)	50
Hsp92I	GRCGYC	1 cut(s)	652
Hsp92II	CATG	8 cut(s)	397, 451, 509, 651, 1108, 1127, 1267, 1280
HspAI	GCGC	2 cut(s)	652, 946
KasI	GGCGCC	1 cut(s)	651
KpnI	GGTACC	1 cut(s)	172
Ksp22I	TGATCA	1 cut(s)	855
Kzo9I	GATC	4 cut(s)	81, 381, 855, 964
LguI	GCTCTTC	1 cut(s)	774
LmnI	GCTCC	6 cut(s)	238, 455, 463, 789, 837, 982
Lsp1109I	GCAGC	1 cut(s)	22
LweI	GCATC	1 cut(s)	856
MaeI	CTAG	4 cut(s)	14, 404, 743, 825
MaeII	ACGT	1 cut(s)	50
MaeIII	GTNAC	1 cut(s)	1183
MalI	GATC	4 cut(s)	83, 383, 857, 966
MboI	GATC	4 cut(s)	81, 381, 855, 964
MboII	GAAGA	3 cut(s)	16, 391, 791
MhlI	GDGCHC	3 cut(s)	460, 794, 1219
MluCI	AATT	5 cut(s)	559, 896, 927, 1248, 1252
Mly113I	GGCGCC	1 cut(s)	652
MlyI	GAGTC	2 cut(s)	333, 1180
MmeI	TCCRAC	2 cut(s)	93, 646
MroXI	GAANNNNTTC	2 cut(s)	927, 1252
MseI	TTAA	1 cut(s)	1251
MslI	CAYNNNNRTG	1 cut(s)	1281
MspI	CCGG	3 cut(s)	578, 1011, 1067
MspR9I	CCNGG	5 cut(s)	93, 281, 309, 981, 1179
MvaI	CCWGG	5 cut(s)	93, 281, 309, 981, 1179
MvnI	CGCG	2 cut(s)	946, 1196
MwoI	GCNNNNNNNGC	4 cut(s)	606, 649, 686, 798
NarI	GGCGCC	1 cut(s)	652
NdeII	GATC	4 cut(s)	81, 381, 855, 964
NlaIII	CATG	8 cut(s)	397, 451, 509, 651, 1108, 1127, 1267, 1280
NlaIV	GGNNCC	6 cut(s)	170, 340, 399, 653, 987, 1009
NmuCI	GTSAC	1 cut(s)	1183
NspI	RCATGY	2 cut(s)	1108, 1280
PasI	CCCWGGG	1 cut(s)	308
PceI	AGGCCT	1 cut(s)	609
PciI	ACATGT	1 cut(s)	1104
PciSI	GCTCTTC	1 cut(s)	774
PdmI	GAANNNNTTC	2 cut(s)	927, 1252
PfeI	GAWTC	5 cut(s)	106, 410, 631, 760, 1127
PflFI	GACNNNGTC	1 cut(s)	542
PinAI	ACCGGT	1 cut(s)	1010
PkrI	GCNGC	1 cut(s)	12
PleI	GAGTC	2 cut(s)	332, 1180
PluTI	GGCGCC	1 cut(s)	655
PmaCI	CACGTG	1 cut(s)	51
PmlI	CACGTG	1 cut(s)	51
PpsI	GAGTC	2 cut(s)	332, 1180
Ppu21I	YACGTR	1 cut(s)	51
PscI	ACATGT	1 cut(s)	1104
PshBI	ATTAAT	1 cut(s)	1251
Psp124BI	GAGCTC	2 cut(s)	460, 794
Psp6I	CCWGG	5 cut(s)	91, 279, 307, 979, 1177
PspCI	CACGTG	1 cut(s)	51
PspGI	CCWGG	5 cut(s)	91, 279, 307, 979, 1177
PspN4I	GGNNCC	6 cut(s)	170, 340, 399, 653, 987, 1009
PspPI	GGNCC	3 cut(s)	339, 1008, 1137
PsyI	GACNNNGTC	1 cut(s)	542
RsaI	GTAC	2 cut(s)	47, 170
RsaNI	GTAC	2 cut(s)	46, 169
RseI	CAYNNNNRTG	1 cut(s)	1281
SacI	GAGCTC	2 cut(s)	460, 794
SapI	GCTCTTC	1 cut(s)	774
SaqAI	TTAA	1 cut(s)	1251
SatI	GCNGC	1 cut(s)	11
Sau3AI	GATC	4 cut(s)	81, 381, 855, 964
Sau96I	GGNCC	3 cut(s)	339, 1008, 1137
SchI	GAGTC	2 cut(s)	333, 1180
ScrFI	CCNGG	5 cut(s)	93, 281, 309, 981, 1179
SduI	GDGCHC	3 cut(s)	460, 794, 1219
SfaNI	GCATC	1 cut(s)	856
SfoI	GGCGCC	1 cut(s)	653
SinI	GGWCC	3 cut(s)	339, 1008, 1137
SmiMI	CAYNNNNRTG	1 cut(s)	1281
SmlI	CTYRAG	1 cut(s)	374
SmoI	CTYRAG	1 cut(s)	374
Sse9I	AATT	5 cut(s)	559, 896, 927, 1248, 1252
SseBI	AGGCCT	1 cut(s)	609
SsiI	CCGC	3 cut(s)	102, 1145, 1194
SspDI	GGCGCC	1 cut(s)	651
SspI	AATATT	1 cut(s)	424
SspMI	CTAG	4 cut(s)	14, 404, 743, 825
SstI	GAGCTC	2 cut(s)	460, 794
StuI	AGGCCT	1 cut(s)	609
StyD4I	CCNGG	5 cut(s)	91, 279, 307, 979, 1177
TaaI	ACNGT	6 cut(s)	164, 223, 693, 706, 1099, 1134
TaiI	ACGT	1 cut(s)	53
TaqI	TCGA	6 cut(s)	29, 213, 435, 472, 546, 634
TasI	AATT	5 cut(s)	559, 896, 927, 1248, 1252
TatI	WGTACW	1 cut(s)	45
TfiI	GAWTC	5 cut(s)	106, 410, 631, 760, 1127
Tru1I	TTAA	1 cut(s)	1251
Tru9I	TTAA	1 cut(s)	1251
TscAI	CASTG	2 cut(s)	759, 1137
TseFI	GTSAC	1 cut(s)	1183
TseI	GCWGC	1 cut(s)	10
Tsp45I	GTSAC	1 cut(s)	1183
TspDTI	ATGAA	5 cut(s)	17, 652, 920, 1140, 1252
TspGWI	ACGGA	1 cut(s)	225
TspRI	CASTG	2 cut(s)	759, 1137
Tth111I	GACNNNGTC	1 cut(s)	542
VneI	GTGCAC	1 cut(s)	1215
VpaK11BI	GGWCC	3 cut(s)	339, 1008, 1137
VspI	ATTAAT	1 cut(s)	1251
XapI	RAATTY	1 cut(s)	927
XceI	RCATGY	2 cut(s)	1108, 1280
XcmI	CCANNNNNNNNNTGG	1 cut(s)	305
XmnI	GAANNNNTTC	2 cut(s)	927, 1252
XspI	CTAG	4 cut(s)	14, 404, 743, 825

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.