Prupe.6G085900_v2.0.a1

Glutelin type-A

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0001439
Physical Location & Seq
Forward (+)
5777228 .. 5779454
2227 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G085900.1

Sequence Viewer

Length: 1068 bp
ATGGAGATTGATCTTTCACCGAAGTTGCCCAAGAAGGTGCACGGTGGAGATGGTGGGTCCTACTTTTCTTGGTGCCCGTCTGAGCTTCCCATGCTCCGTGAAGGTAACATTGGCGCTGCCAAGCTGGCCCTTGAGAAGAACGGGTTTGCTCTCCCTCAATACTGCGATTCTGCCAAGGTCGCTTACGTCCTTCAAGGTAATGGTGTAGTTGGAATTGTGCTTCCTGAGAAGGAAGAGAAGATTCTTCCAGTGAAGAAGGGTGATGCCATTGCCCTCCCTTTTGGAGTTGTTACTTGGTGGTACAACAAGGAGGACACTGAGTTTGTAGTTCTTTTCTTGGGTGACACTTCAAAAGCACACAAAAGGGGTGAGTTCACTTCCTTCTATCTTAATGGCTCCAATGGCATTTTCACTGGCTTCTCAACTGAGTTTGTGGGTCGAGCATGGGATTTGGAGGAGAGCATTGTGAAGACTCTCGTTGGAAAGCAATCCGGTAAGGGCATAGTCAAGCTTAGTGGAGTTAACTTACCTGAGCCAAAGAAGGAACACCGAGATGGTATGACATTGAACTGTGAAGAGGCTCCTCTGGATGTTGACATTAAGAATGGTGGAAGAGTTGTTGTTTTGAACACTAAAAACCTTCCTTTGGTTGGTGAGGTTGGACTTGGCGCTGACCTTGTTAGATTGGATGGAAGCGCTATGTGCTCCCCTGGATTTTCTTGTGACTCCGCCCTGCAGGTGACTTATATTGTTAGGGGCAGTGGCCGTGTCCAAGTTGTTGGAGTTGACGGTAAGAGGGTCTTGGAAACAACTATCAAAGCTGGTAATTTGTTCATCGTTCCTAGGTACTTTGTTGTTTCGAAGATTGCTGATCCAGATGGCTTGGAATGGTTTTCTATCATCACTACTCCCAATCCCATATTCACCCACTTGGCTGGAAGCATTGGTTGTTGGAAGGCTTTATCTCCTCAGGTGCTCCAGGCTGCCTTCAATGTGGATGCAGATACAGAAAAACTATTCCGGTCGAAGAGGACTGCTGATGCTATCTTCTTCCCTCCACCAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cupin_1

Protein Analysis

356

Amino Acids

38.45

Weight (kDa)

6.91

Isoelectric Point (pI)

30.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 727
Acc36I ACCTGC 1 cut(s) 727
AccB1I GGYRCC 1 cut(s) 72
AciI CCGC 1 cut(s) 729
AclWI GGATC 1 cut(s) 866
AcoI YGGCCR 1 cut(s) 763
AfaI GTAC 2 cut(s) 302, 848
AfeI AGCGCT 1 cut(s) 697
AfiI CCNNNNNNNGG 2 cut(s) 646, 650
AgsI TTSAA 5 cut(s) 194, 351, 568, 628, 991
AjnI CCWGG 2 cut(s) 709, 978
AjuI GAANNNNNNNTTGG 6 cut(s) 93, 125, 392, 424, 905, 937
AleI CACNNNNGTG 1 cut(s) 1063
AluBI AGCT 4 cut(s) 85, 124, 511, 821
AluI AGCT 4 cut(s) 85, 124, 511, 821
Alw21I GWGCWC 3 cut(s) 42, 707, 978
Alw44I GTGCAC 1 cut(s) 38
AlwI GGATC 1 cut(s) 866
Aor51HI AGCGCT 1 cut(s) 697
AoxI GGCC 2 cut(s) 126, 763
ApaLI GTGCAC 1 cut(s) 38
ApeKI GCWGC 2 cut(s) 116, 983
ArsI GACNNNNNNTTYG 2 cut(s) 305, 337
AspA2I CCTAGG 1 cut(s) 842
AspLEI GCGC 3 cut(s) 116, 671, 698
AspS9I GGNCC 2 cut(s) 57, 127
AsuHPI GGTGA 7 cut(s) 9, 272, 353, 380, 665, 751, 916
AsuII TTCGAA 1 cut(s) 860
AvaII GGWCC 1 cut(s) 57
AvrII CCTAGG 1 cut(s) 842
AxyI CCTNAGG 1 cut(s) 969
BaeGI GKGCMC 2 cut(s) 42, 77
BanI GGYRCC 1 cut(s) 72
BbsI GAAGAC 1 cut(s) 476
Bbv12I GWGCWC 3 cut(s) 42, 707, 978
BbvI GCAGC 2 cut(s) 103, 970
BccI CCATC 4 cut(s) 44, 548, 683, 872
BceAI ACGGC 1 cut(s) 750
BciT130I CCWGG 2 cut(s) 711, 980
BfaI CTAG 1 cut(s) 843
BfmI CTRYAG 1 cut(s) 734
BfoI RGCGCY 3 cut(s) 117, 672, 699
BfuAI ACCTGC 1 cut(s) 727
BglI GCCNNNNNGGC 1 cut(s) 125
BisI GCNGC 2 cut(s) 117, 984
BlnI CCTAGG 1 cut(s) 842
BlsI GCNGC 2 cut(s) 118, 985
Bme1390I CCNGG 2 cut(s) 711, 980
Bme18I GGWCC 1 cut(s) 57
BmgT120I GGNCC 2 cut(s) 57, 127
BmiI GGNNCC 4 cut(s) 58, 74, 397, 582
BmrFI CCNGG 2 cut(s) 711, 980
BmsI GCATC 3 cut(s) 253, 988, 1030
BpiI GAAGAC 1 cut(s) 476
BpmI CTGGAG 1 cut(s) 962
Bpu10I CCTNAGC 1 cut(s) 531
Bpu14I TTCGAA 1 cut(s) 860
BpuEI CTTGAG 1 cut(s) 152
BsaJI CCNNGG 3 cut(s) 174, 709, 842
BsaWI WCCGGW 2 cut(s) 491, 1020
Bsc4I CCNNNNNNNGG 2 cut(s) 646, 650
Bse1I ACTGG 2 cut(s) 248, 418
Bse21I CCTNAGG 1 cut(s) 969
Bse3DI GCAATG 1 cut(s) 267
BseBI CCWGG 2 cut(s) 711, 980
BseDI CCNNGG 3 cut(s) 174, 709, 842
BseGI GGATG 3 cut(s) 595, 694, 1003
BseLI CCNNNNNNNGG 2 cut(s) 646, 650
BseMI GCAATG 1 cut(s) 267
BseMII CTCAG 6 cut(s) 72, 216, 309, 417, 522, 983
BseNI ACTGG 2 cut(s) 248, 418
BseRI GAGGAG 3 cut(s) 470, 573, 957
BseSI GKGCMC 2 cut(s) 42, 77
BseXI GCAGC 2 cut(s) 103, 970
Bsh1285I CGRYCG 1 cut(s) 1025
BshFI GGCC 2 cut(s) 128, 765
BshNI GGYRCC 1 cut(s) 72
BsiEI CGRYCG 1 cut(s) 1025
BsiHKAI GWGCWC 3 cut(s) 42, 707, 978
BsiSI CCGG 2 cut(s) 492, 1021
BslI CCNNNNNNNGG 2 cut(s) 646, 650
BsnI GGCC 2 cut(s) 128, 765
Bsp119I TTCGAA 1 cut(s) 860
Bsp1286I GDGCHC 4 cut(s) 42, 77, 707, 978
Bsp143I GATC 2 cut(s) 10, 871
BspACI CCGC 1 cut(s) 729
BspANI GGCC 2 cut(s) 128, 765
BspCNI CTCAG 6 cut(s) 73, 217, 310, 418, 523, 982
BspLI GGNNCC 4 cut(s) 58, 74, 397, 582
BspMAI CTGCAG 1 cut(s) 738
BspMI ACCTGC 1 cut(s) 727
BspPI GGATC 1 cut(s) 866
BspT104I TTCGAA 1 cut(s) 860
BspT107I GGYRCC 1 cut(s) 72
BsrDI GCAATG 1 cut(s) 267
BsrI ACTGG 2 cut(s) 248, 418
BssECI CCNNGG 3 cut(s) 174, 709, 842
BssMI GATC 2 cut(s) 10, 871
BssT1I CCWWGG 2 cut(s) 174, 842
Bst2UI CCWGG 2 cut(s) 711, 980
Bst4CI ACNGT 3 cut(s) 44, 572, 791
Bst6I CTCTTC 4 cut(s) 228, 570, 607, 1022
BstBI TTCGAA 1 cut(s) 860
BstC8I GCNNGC 1 cut(s) 126
BstDEI CTNAG 7 cut(s) 81, 225, 318, 426, 512, 531, 969
BstF5I GGATG 3 cut(s) 595, 694, 1003
BstH2I RGCGCY 3 cut(s) 117, 672, 699
BstHHI GCGC 3 cut(s) 116, 671, 698
BstKTI GATC 2 cut(s) 13, 874
BstMBI GATC 2 cut(s) 10, 871
BstMCI CGRYCG 1 cut(s) 1025
BstMWI GCNNNNNNNGC 5 cut(s) 91, 125, 179, 402, 702
BstNI CCWGG 2 cut(s) 711, 980
BstSCI CCNGG 2 cut(s) 709, 978
BstSFI CTRYAG 1 cut(s) 734
BstSLI GKGCMC 2 cut(s) 42, 77
BstV1I GCAGC 2 cut(s) 103, 970
BstV2I GAAGAC 1 cut(s) 476
BstXI CCANNNNNNTGG 2 cut(s) 779, 935
Bsu36I CCTNAGG 1 cut(s) 969
BsuRI GGCC 2 cut(s) 128, 765
BtsCI GGATG 3 cut(s) 595, 694, 1003
BtsI GCAGTG 1 cut(s) 766
BtsIMutI CAGTG 4 cut(s) 255, 315, 411, 766
BveI ACCTGC 1 cut(s) 727
Cac8I GCNNGC 1 cut(s) 126
CfoI GCGC 3 cut(s) 116, 671, 698
Cfr13I GGNCC 2 cut(s) 57, 127
Csp6I GTAC 2 cut(s) 301, 847
CspCI CAANNNNNGTGG 2 cut(s) 496, 531
CviAII CATG 2 cut(s) 91, 444
CviQI GTAC 2 cut(s) 301, 847
DdeI CTNAG 7 cut(s) 81, 225, 318, 426, 512, 531, 969
DpnI GATC 2 cut(s) 12, 873
DpnII GATC 2 cut(s) 10, 871
EaeI YGGCCR 1 cut(s) 763
Eam1104I CTCTTC 4 cut(s) 228, 570, 607, 1022
EarI CTCTTC 4 cut(s) 228, 570, 607, 1022
EciI GGCGGA 1 cut(s) 718
Eco130I CCWWGG 2 cut(s) 174, 842
Eco47I GGWCC 1 cut(s) 57
Eco47III AGCGCT 1 cut(s) 697
Eco81I CCTNAGG 1 cut(s) 969
EcoO109I RGGNCCY 1 cut(s) 57
EcoRII CCWGG 2 cut(s) 709, 978
EcoT14I CCWWGG 2 cut(s) 174, 842
ErhI CCWWGG 2 cut(s) 174, 842
FaeI CATG 2 cut(s) 94, 447
FaiI YATR 7 cut(s) 92, 445, 503, 560, 701, 747, 920
FalI AAGNNNNNCTT 2 cut(s) 785, 817
FatI CATG 2 cut(s) 90, 443
Fnu4HI GCNGC 2 cut(s) 117, 984
FokI GGATG 3 cut(s) 602, 701, 1010
Fsp4HI GCNGC 2 cut(s) 117, 984
FspBI CTAG 1 cut(s) 843
GlaI GCGC 3 cut(s) 115, 670, 697
GluI GCNGC 2 cut(s) 117, 984
GsuI CTGGAG 1 cut(s) 962
HaeII RGCGCY 3 cut(s) 117, 672, 699
HaeIII GGCC 2 cut(s) 128, 765
HapII CCGG 2 cut(s) 492, 1021
HhaI GCGC 3 cut(s) 116, 671, 698
Hin1II CATG 2 cut(s) 94, 447
Hin6I GCGC 3 cut(s) 114, 669, 696
HinP1I GCGC 3 cut(s) 114, 669, 696
HincII GTYRAC 3 cut(s) 523, 595, 787
HindII GTYRAC 3 cut(s) 523, 595, 787
HindIII AAGCTT 1 cut(s) 509
HinfI GANTC 4 cut(s) 167, 241, 472, 725
HpaI GTTAAC 1 cut(s) 523
HpaII CCGG 2 cut(s) 492, 1021
HphI GGTGA 7 cut(s) 9, 272, 353, 380, 665, 751, 916
Hpy166II GTNNAC 5 cut(s) 40, 375, 523, 595, 787
Hpy188I TCNGA 1 cut(s) 82
Hpy188III TCNNGA 3 cut(s) 224, 587, 875
Hpy8I GTNNAC 5 cut(s) 40, 375, 523, 595, 787
HpyCH4III ACNGT 3 cut(s) 44, 572, 791
HpyCH4IV ACGT 1 cut(s) 186
HpyCH4V TGCA 3 cut(s) 40, 736, 1001
HpyF10VI GCNNNNNNNGC 5 cut(s) 91, 125, 179, 402, 702
HpyF3I CTNAG 7 cut(s) 81, 225, 318, 426, 512, 531, 969
HpySE526I ACGT 1 cut(s) 186
Hsp92II CATG 2 cut(s) 94, 447
HspAI GCGC 3 cut(s) 114, 669, 696
KspAI GTTAAC 1 cut(s) 523
Kzo9I GATC 2 cut(s) 10, 871
LmnI GCTCC 5 cut(s) 99, 401, 586, 710, 981
Lsp1109I GCAGC 2 cut(s) 103, 970
LweI GCATC 3 cut(s) 253, 988, 1030
MaeI CTAG 1 cut(s) 843
MaeII ACGT 1 cut(s) 186
MaeIII GTNAC 5 cut(s) 104, 289, 341, 722, 739
MalI GATC 2 cut(s) 12, 873
MboI GATC 2 cut(s) 10, 871
MhlI GDGCHC 4 cut(s) 42, 77, 707, 978
MluCI AATT 2 cut(s) 213, 826
MlyI GAGTC 2 cut(s) 466, 719
MmeI TCCRAC 5 cut(s) 190, 460, 640, 760, 932
MseI TTAA 3 cut(s) 390, 522, 600
MslI CAYNNNNRTG 2 cut(s) 552, 1063
MspI CCGG 2 cut(s) 492, 1021
MspR9I CCNGG 2 cut(s) 711, 980
MvaI CCWGG 2 cut(s) 711, 980
MwoI GCNNNNNNNGC 5 cut(s) 91, 125, 179, 402, 702
NdeII GATC 2 cut(s) 10, 871
NlaIII CATG 2 cut(s) 94, 447
NlaIV GGNNCC 4 cut(s) 58, 74, 397, 582
NmuCI GTSAC 3 cut(s) 341, 722, 739
NspV TTCGAA 1 cut(s) 860
OliI CACNNNNGTG 1 cut(s) 1063
PaqCI CACCTGC 1 cut(s) 727
PfeI GAWTC 2 cut(s) 167, 241
PkrI GCNGC 2 cut(s) 118, 985
PleI GAGTC 2 cut(s) 466, 719
PpsI GAGTC 2 cut(s) 466, 719
PpuMI RGGWCCY 1 cut(s) 57
Psp5II RGGWCCY 1 cut(s) 57
Psp6I CCWGG 2 cut(s) 709, 978
PspGI CCWGG 2 cut(s) 709, 978
PspN4I GGNNCC 4 cut(s) 58, 74, 397, 582
PspPI GGNCC 2 cut(s) 57, 127
PspPPI RGGWCCY 1 cut(s) 57
PstI CTGCAG 1 cut(s) 738
RsaI GTAC 2 cut(s) 302, 848
RsaNI GTAC 2 cut(s) 301, 847
RseI CAYNNNNRTG 2 cut(s) 552, 1063
SaqAI TTAA 3 cut(s) 390, 522, 600
SatI GCNGC 2 cut(s) 117, 984
Sau3AI GATC 2 cut(s) 10, 871
Sau96I GGNCC 2 cut(s) 57, 127
SbfI CCTGCAGG 1 cut(s) 738
SchI GAGTC 2 cut(s) 466, 719
ScrFI CCNGG 2 cut(s) 711, 980
SdaI CCTGCAGG 1 cut(s) 738
SduI GDGCHC 4 cut(s) 42, 77, 707, 978
SfaNI GCATC 3 cut(s) 253, 988, 1030
SfcI CTRYAG 1 cut(s) 734
SfuI TTCGAA 1 cut(s) 860
SinI GGWCC 1 cut(s) 57
SmiMI CAYNNNNRTG 2 cut(s) 552, 1063
SmlI CTYRAG 1 cut(s) 131
SmoI CTYRAG 1 cut(s) 131
Sse8387I CCTGCAGG 1 cut(s) 738
Sse9I AATT 2 cut(s) 213, 826
SsiI CCGC 1 cut(s) 729
SspMI CTAG 1 cut(s) 843
StyD4I CCNGG 2 cut(s) 709, 978
StyI CCWWGG 2 cut(s) 174, 842
TaaI ACNGT 3 cut(s) 44, 572, 791
TaiI ACGT 1 cut(s) 189
TaqI TCGA 3 cut(s) 439, 860, 1025
TasI AATT 2 cut(s) 213, 826
TfiI GAWTC 2 cut(s) 167, 241
Tru1I TTAA 3 cut(s) 390, 522, 600
Tru9I TTAA 3 cut(s) 390, 522, 600
TscAI CASTG 4 cut(s) 255, 322, 418, 766
TseFI GTSAC 3 cut(s) 341, 722, 739
TseI GCWGC 2 cut(s) 116, 983
Tsp45I GTSAC 3 cut(s) 341, 722, 739
TspDTI ATGAA 1 cut(s) 823
TspGWI ACGGA 1 cut(s) 86
TspRI CASTG 4 cut(s) 255, 322, 418, 766
VneI GTGCAC 1 cut(s) 38
VpaK11BI GGWCC 1 cut(s) 57
XmaJI CCTAGG 1 cut(s) 842
XspI CTAG 1 cut(s) 843
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.