Rmu_ssc0000472.1_g000022

Glutelin type-A

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000472.1
Physical Location & Seq
Reverse (-)
119852 .. 120361
510 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000472.1_g000022.1.cds

Sequence Viewer

Length: 510 bp
atgacattgaactgcgaagaggctcctcttgatgttgatatcaagggtggtgggagagttgttgttttgaatactaagaatcttcctttggttggtgaggttgggcttggtgctgatcttgttaggttggatggaagtgctatgtgctcccctgggttttcttgtgactctgcattgcaggtgacttacattgttaggggcagtggccgtgtgcaagttgttggtgtagatgggaagagggtcttggaaacaactgttacagctggcaacttgttcattgttcctcgattctttgtcgtttcaaagattgctgatccagaaggcttggaatggttctccatcatcaccactcccaacccaatattcactcatttggctggaagtattggagcttggaaggcattatctcctcaggtgcttgaggcttccttcaaagtggattcaggcactgagaaactcttccgatcaaagagaacttctgatgcaatcttcttccctcctccaaagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

169

Amino Acids

18.04

Weight (kDa)

6.58

Isoelectric Point (pI)

24.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 169
Acc36I ACCTGC 1 cut(s) 169
AclWI GGATC 1 cut(s) 308
AcoI YGGCCR 1 cut(s) 205
AfiI CCNNNNNNNGG 1 cut(s) 92
AgsI TTSAA 4 cut(s) 10, 70, 303, 433
AjnI CCWGG 1 cut(s) 151
AjuI GAANNNNNNNTTGG 6 cut(s) 71, 103, 227, 259, 347, 379
AluBI AGCT 2 cut(s) 263, 392
AluI AGCT 2 cut(s) 263, 392
Alw21I GWGCWC 1 cut(s) 149
AlwI GGATC 1 cut(s) 308
AlwNI CAGNNNCTG 1 cut(s) 449
AoxI GGCC 1 cut(s) 205
Asp700I GAANNNNTTC 1 cut(s) 458
AsuHPI GGTGA 3 cut(s) 107, 193, 337
AxyI CCTNAGG 1 cut(s) 411
Bbv12I GWGCWC 1 cut(s) 149
BccI CCATC 3 cut(s) 125, 224, 347
BceAI ACGGC 1 cut(s) 192
BciT130I CCWGG 1 cut(s) 153
BfuAI ACCTGC 1 cut(s) 169
Bme1390I CCNGG 1 cut(s) 153
BmiI GGNNCC 1 cut(s) 24
BmrFI CCNGG 1 cut(s) 153
BmsI GCATC 1 cut(s) 472
BpuEI CTTGAG 1 cut(s) 440
BsaJI CCNNGG 2 cut(s) 151, 152
Bsc4I CCNNNNNNNGG 1 cut(s) 92
Bse21I CCTNAGG 1 cut(s) 411
Bse3DI GCAATG 1 cut(s) 173
BseBI CCWGG 1 cut(s) 153
BseDI CCNNGG 2 cut(s) 151, 152
BseGI GGATG 1 cut(s) 136
BseLI CCNNNNNNNGG 1 cut(s) 92
BseMI GCAATG 1 cut(s) 173
BseMII CTCAG 2 cut(s) 425, 441
BseRI GAGGAG 3 cut(s) 15, 399, 489
BshFI GGCC 1 cut(s) 207
BsiHKAI GWGCWC 1 cut(s) 149
BslI CCNNNNNNNGG 1 cut(s) 92
BsnI GGCC 1 cut(s) 207
Bsp1286I GDGCHC 1 cut(s) 149
Bsp143I GATC 3 cut(s) 115, 313, 464
BspANI GGCC 1 cut(s) 207
BspCNI CTCAG 2 cut(s) 424, 442
BspLI GGNNCC 1 cut(s) 24
BspMI ACCTGC 1 cut(s) 169
BspPI GGATC 1 cut(s) 308
BsrDI GCAATG 1 cut(s) 173
BssECI CCNNGG 2 cut(s) 151, 152
BssMI GATC 3 cut(s) 115, 313, 464
Bst2UI CCWGG 1 cut(s) 153
Bst4CI ACNGT 1 cut(s) 256
Bst6I CTCTTC 3 cut(s) 12, 230, 464
BstC8I GCNNGC 1 cut(s) 265
BstDEI CTNAG 3 cut(s) 75, 411, 450
BstF5I GGATG 1 cut(s) 136
BstKTI GATC 3 cut(s) 118, 316, 467
BstMBI GATC 3 cut(s) 115, 313, 464
BstMWI GCNNNNNNNGC 1 cut(s) 398
BstNI CCWGG 1 cut(s) 153
BstSCI CCNGG 1 cut(s) 151
Bsu36I CCTNAGG 1 cut(s) 411
BsuRI GGCC 1 cut(s) 207
BtsCI GGATG 1 cut(s) 136
BtsI GCAGTG 1 cut(s) 208
BtsIMutI CAGTG 2 cut(s) 208, 447
BveI ACCTGC 1 cut(s) 169
Cac8I GCNNGC 1 cut(s) 265
CaiI CAGNNNCTG 1 cut(s) 449
CspCI CAANNNNNGTGG 2 cut(s) 31, 66
CviJI RGCY 8 cut(s) 23, 106, 207, 263, 324, 377, 392, 425
CviKI_1 RGCY 8 cut(s) 23, 106, 207, 263, 324, 377, 392, 425
DdeI CTNAG 3 cut(s) 75, 411, 450
DpnI GATC 3 cut(s) 117, 315, 466
DpnII GATC 3 cut(s) 115, 313, 464
EaeI YGGCCR 1 cut(s) 205
Eam1104I CTCTTC 3 cut(s) 12, 230, 464
EarI CTCTTC 3 cut(s) 12, 230, 464
Eco32I GATATC 1 cut(s) 40
Eco81I CCTNAGG 1 cut(s) 411
EcoRII CCWGG 1 cut(s) 151
EcoRV GATATC 1 cut(s) 40
FaiI YATR 1 cut(s) 143
FalI AAGNNNNNCTT 2 cut(s) 227, 259
FokI GGATG 1 cut(s) 143
HaeIII GGCC 1 cut(s) 207
HinfI GANTC 4 cut(s) 79, 167, 288, 440
HphI GGTGA 3 cut(s) 107, 193, 337
Hpy188I TCNGA 2 cut(s) 464, 481
Hpy188III TCNNGA 2 cut(s) 29, 317
HpyAV CCTTC 3 cut(s) 314, 391, 439
HpyCH4III ACNGT 1 cut(s) 256
HpyCH4V TGCA 4 cut(s) 173, 178, 214, 485
HpyF10VI GCNNNNNNNGC 1 cut(s) 398
HpyF3I CTNAG 3 cut(s) 75, 411, 450
Kzo9I GATC 3 cut(s) 115, 313, 464
LmnI GCTCC 3 cut(s) 28, 152, 389
LpnPI CCDG 8 cut(s) 138, 164, 165, 249, 330, 363, 398, 429
LweI GCATC 1 cut(s) 472
MaeIII GTNAC 3 cut(s) 164, 181, 256
MalI GATC 3 cut(s) 117, 315, 466
MboI GATC 3 cut(s) 115, 313, 464
MboII GAAGA 6 cut(s) 29, 74, 247, 451, 481, 484
MhlI GDGCHC 1 cut(s) 149
MlyI GAGTC 1 cut(s) 161
MmeI TCCRAC 1 cut(s) 108
MnlI CCTC 9 cut(s) 13, 36, 91, 231, 294, 415, 420, 507, 510
MroXI GAANNNNTTC 1 cut(s) 458
MspA1I CMGCKG 1 cut(s) 263
MspR9I CCNGG 1 cut(s) 153
MvaI CCWGG 1 cut(s) 153
MwoI GCNNNNNNNGC 1 cut(s) 398
NdeII GATC 3 cut(s) 115, 313, 464
NlaIV GGNNCC 1 cut(s) 24
NmuCI GTSAC 2 cut(s) 164, 181
PaqCI CACCTGC 1 cut(s) 169
PasI CCCWGGG 1 cut(s) 152
PdmI GAANNNNTTC 1 cut(s) 458
PfeI GAWTC 3 cut(s) 79, 288, 440
PleI GAGTC 1 cut(s) 161
PpsI GAGTC 1 cut(s) 161
Psp6I CCWGG 1 cut(s) 151
PspGI CCWGG 1 cut(s) 151
PspN4I GGNNCC 1 cut(s) 24
PstNI CAGNNNCTG 1 cut(s) 449
PvuII CAGCTG 1 cut(s) 263
Sau3AI GATC 3 cut(s) 115, 313, 464
SchI GAGTC 1 cut(s) 161
ScrFI CCNGG 1 cut(s) 153
SduI GDGCHC 1 cut(s) 149
SetI ASST 6 cut(s) 102, 128, 183, 265, 394, 417
SfaNI GCATC 1 cut(s) 472
SmlI CTYRAG 1 cut(s) 419
SmoI CTYRAG 1 cut(s) 419
SspI AATATT 1 cut(s) 363
StyD4I CCNGG 1 cut(s) 151
TaaI ACNGT 1 cut(s) 256
TaqI TCGA 1 cut(s) 286
TfiI GAWTC 3 cut(s) 79, 288, 440
TscAI CASTG 2 cut(s) 208, 454
TseFI GTSAC 2 cut(s) 164, 181
Tsp45I GTSAC 2 cut(s) 164, 181
TspDTI ATGAA 1 cut(s) 265
TspRI CASTG 2 cut(s) 208, 454
XmnI GAANNNNTTC 1 cut(s) 458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.