Prupe.6G086500_v2.0.a1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
5817905 .. 5820574
2670 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G086500.1

Sequence Viewer

Length: 1569 bp
ATGATCCTCTTTCTTCTCTTAGCTATCCTTCTTATTCTCTTCCCAATCCTAACCTCCAAAATATTCCAAACCCACCTTCACCTCCCTCCAAGCCCCTTAGCTCTACCCATCATAGATCACTACCATCTCCTCGGCCCTCTCATCCACCGCACCTTCCACAACCTCTCTCTCCGCTTCGGCCCCTTATTCTCCCTCTGCCTCGGCTCGCTCCAATGCTTTGTCGTTTCCTCAGCGGACCTAGCGAAAGAGTTCCTCAGCACCCATGAGCTCTCCTTCATATCCCATGCTCAGTCCCTCGCCATTGAAAGCATAACCTACAATGCTTCCCTTGCATTTGCACCCTATGGACCTTACTGGAAGTTCATCAAGAAACTGACATTGAAAGAGCTTCTAGGAAACCATAGCATCAACAACTTAGTTTCCATTCGAACCCAAGAGTATCTTAGGCTTCTGAGGTTCTTGGGCAAGAAAGCTGAGAGTGGTGAAGCTGTGAATCTCACTGAGGAGTTTCCGAAGCTTTGGAACAATGTGATCTTGCAGATGATTGTTGGGAATCGGGGTTTGAGCGCCGAAGGTAGGGTGGTGCTGGCGGAGGAGGCGGGGGTGTTGGTGCGGCAGGCCACGAGGCTTTTTGGAGAGGTGAGTTTGTGCGATTTTTTTTGGGCTTGTAAGAAGTTGGATTTGGGAGGGTTTGTGAAGAGAATTGAGGAGACGCGTAGGAGGTTTGATGTGTTGGTGGAGAAGGTAATTAGGGAACGAGAAGAGCTGAGAAAGAAGGAACGGATGGAAGAGAAGGAGGAAGTCAAGGATTTTCTTGCTACATTGCTTGATATGTTGGAGGATGGGAGTGCTGAGGTTGAATTTACAAGACTTCACATTAAGGCTCTAATTACGGATTTATTCATGGCTGAAACTGACACAAATGCAATTTCACTAGAGTGGGCATTGGCAGAGCTCATCAACCACCCAAGAGTGCTCAAGAAAGCAAAGGAGGAGATCCATCGAGCCGTCGGAAATCGAAGAGTAGCCGGAGATTCGGATGTTCCAAATCTTCCATACATCCAAGCCATCATAAAAGAAACATTTAGACTACATCCACCAGTGCCTTTGGTCACGAGAAACTCTGTACAACAATGTAAGATTGGGGGATATGACATCCCTACAAACACAATGCTACATGTGAATGTTTGGGCCATTGGAAGGGACCCAAAGAACTGGGAAAGCCCACTGGACTTCTGGCTTGAAAGATTCTTACAACTCGGTGAGGACGATGGCCAGATGAGTGCAGTGGACGTTGATGTTAGGGGCCAACATTTTCATCTCATGCCATTTGGGTCTGGGAGGAGGGTGTGTCGTGGTATGAACTTGGCCATGAAAATGTTGCCTGGGGTACTTGCGGCTTTGATTCAGTGCTTCGATTGGAAGGTTGATGGGTCTGATTGCAAGAAGATGAATGGTGATGATGTTCTTGAAATGGATGAACGGCCTGGATTTACTGCTCCGAGGGCGCATGATCTTGTATGCGTTCCCGTTGCCCGCTTCAGCCCACTCAACATCCTTGACCCATAA

Protein Analysis

523

Amino Acids

59.25

Weight (kDa)

6.51

Isoelectric Point (pI)

42.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 715
AciI CCGC 8 cut(s) 148, 172, 233, 590, 599, 613, 1397, 1537
AclWI GGATC 1 cut(s) 991
AcoI YGGCCR 2 cut(s) 1273, 1368
AcsI RAATTY 1 cut(s) 860
AcuI CTGAAG 1 cut(s) 1525
AfaI GTAC 2 cut(s) 1128, 1392
AfiI CCNNNNNNNGG 2 cut(s) 576, 1200
AflIII ACRYGT 2 cut(s) 713, 1177
AgsI TTSAA 5 cut(s) 305, 382, 860, 1244, 1472
AjnI CCWGG 2 cut(s) 1384, 1486
AjuI GAANNNNNNNTTGG 4 cut(s) 60, 92, 665, 697
AleI CACNNNNGTG 1 cut(s) 937
AluBI AGCT 9 cut(s) 23, 101, 268, 388, 473, 488, 517, 766, 955
AluI AGCT 9 cut(s) 23, 101, 268, 388, 473, 488, 517, 766, 955
Alw21I GWGCWC 3 cut(s) 270, 957, 978
Alw26I GTCTC 1 cut(s) 704
AlwI GGATC 1 cut(s) 991
AoxI GGCC 8 cut(s) 133, 178, 618, 1191, 1273, 1306, 1368, 1484
ApoI RAATTY 1 cut(s) 860
Asp700I GAANNNNTTC 1 cut(s) 248
AspLEI GCGC 2 cut(s) 569, 1510
AspS9I GGNCC 7 cut(s) 134, 179, 235, 347, 1191, 1204, 1306
AsuHPI GGTGA 5 cut(s) 71, 494, 652, 1274, 1469
AsuII TTCGAA 1 cut(s) 427
AvaII GGWCC 3 cut(s) 235, 347, 1204
BalI TGGCCA 2 cut(s) 1275, 1370
BanII GRGCYC 2 cut(s) 270, 957
BauI CACGAG 2 cut(s) 622, 1114
Bbv12I GWGCWC 3 cut(s) 270, 957, 978
BbvCI CCTCAGC 3 cut(s) 229, 254, 852
BccI CCATC 8 cut(s) 116, 132, 778, 836, 1008, 1076, 1265, 1424
BceAI ACGGC 2 cut(s) 992, 1499
BciT130I CCWGG 2 cut(s) 1386, 1488
BcoDI GTCTC 1 cut(s) 704
BfaI CTAG 3 cut(s) 239, 392, 935
BfoI RGCGCY 1 cut(s) 570
BisI GCNGC 2 cut(s) 614, 1398
BlsI GCNGC 2 cut(s) 615, 1399
Bme1390I CCNGG 2 cut(s) 1386, 1488
Bme18I GGWCC 3 cut(s) 235, 347, 1204
BmgT120I GGNCC 7 cut(s) 134, 179, 235, 347, 1191, 1204, 1306
BmiI GGNNCC 4 cut(s) 181, 1205, 1206, 1307
BmrFI CCNGG 2 cut(s) 1386, 1488
BmrI ACTGGG 1 cut(s) 1225
BmsI GCATC 1 cut(s) 414
BmuI ACTGGG 1 cut(s) 1225
Bpu10I CCTNAGC 4 cut(s) 97, 229, 254, 852
Bpu14I TTCGAA 1 cut(s) 427
BpuEI CTTGAG 1 cut(s) 962
BsaJI CCNNGG 4 cut(s) 130, 199, 1385, 1502
BsaXI ACNNNNNCTCC 4 cut(s) 678, 708, 1336, 1366
Bsc4I CCNNNNNNNGG 2 cut(s) 576, 1200
Bse1I ACTGG 4 cut(s) 359, 1100, 1220, 1233
Bse3DI GCAATG 1 cut(s) 821
BseBI CCWGG 2 cut(s) 1386, 1488
BseDI CCNNGG 4 cut(s) 130, 199, 1385, 1502
BseGI GGATG 9 cut(s) 141, 789, 847, 1045, 1059, 1093, 1155, 1483, 1554
BseLI CCNNNNNNNGG 2 cut(s) 576, 1200
BseMI GCAATG 1 cut(s) 821
BseMII CTCAG 8 cut(s) 243, 268, 302, 443, 465, 492, 758, 843
BseNI ACTGG 4 cut(s) 359, 1100, 1220, 1233
BseRI GAGGAG 6 cut(s) 119, 518, 608, 722, 1007, 1357
BsgI GTGCAG 1 cut(s) 1305
Bsh1236I CGCG 1 cut(s) 715
BshFI GGCC 8 cut(s) 135, 180, 620, 1193, 1275, 1308, 1370, 1486
BsiHKAI GWGCWC 3 cut(s) 270, 957, 978
BsiSI CCGG 1 cut(s) 1029
BslFI GGGAC 2 cut(s) 277, 1217
BslI CCNNNNNNNGG 2 cut(s) 576, 1200
BsmAI GTCTC 1 cut(s) 704
BsmBI CGTCTC 1 cut(s) 704
BsmFI GGGAC 2 cut(s) 277, 1217
BsnI GGCC 8 cut(s) 135, 180, 620, 1193, 1275, 1308, 1370, 1486
Bsp119I TTCGAA 1 cut(s) 427
Bsp1286I GDGCHC 3 cut(s) 270, 957, 978
Bsp1407I TGTACA 1 cut(s) 1126
Bsp143I GATC 5 cut(s) 3, 115, 531, 996, 1513
BspACI CCGC 8 cut(s) 148, 172, 233, 590, 599, 613, 1397, 1537
BspANI GGCC 8 cut(s) 135, 180, 620, 1193, 1275, 1308, 1370, 1486
BspCNI CTCAG 8 cut(s) 242, 267, 301, 444, 466, 493, 759, 844
BspFNI CGCG 1 cut(s) 715
BspLI GGNNCC 4 cut(s) 181, 1205, 1206, 1307
BspPI GGATC 1 cut(s) 991
BspQI GCTCTTC 1 cut(s) 756
BspT104I TTCGAA 1 cut(s) 427
BsrDI GCAATG 1 cut(s) 821
BsrGI TGTACA 1 cut(s) 1126
BsrI ACTGG 4 cut(s) 359, 1100, 1220, 1233
BssECI CCNNGG 4 cut(s) 130, 199, 1385, 1502
BssMI GATC 5 cut(s) 3, 115, 531, 996, 1513
BssSI CACGAG 2 cut(s) 622, 1114
Bst2BI CACGAG 2 cut(s) 622, 1114
Bst2UI CCWGG 2 cut(s) 1386, 1488
Bst6I CTCTTC 5 cut(s) 44, 692, 756, 783, 1015
BstAUI TGTACA 1 cut(s) 1126
BstBI TTCGAA 1 cut(s) 427
BstC8I GCNNGC 4 cut(s) 206, 588, 618, 1537
BstF5I GGATG 9 cut(s) 141, 789, 847, 1045, 1059, 1093, 1155, 1483, 1554
BstFNI CGCG 1 cut(s) 715
BstH2I RGCGCY 1 cut(s) 570
BstHHI GCGC 2 cut(s) 569, 1510
BstKTI GATC 5 cut(s) 6, 118, 534, 999, 1516
BstMAI GTCTC 1 cut(s) 704
BstMBI GATC 5 cut(s) 3, 115, 531, 996, 1513
BstMWI GCNNNNNNNGC 4 cut(s) 239, 329, 596, 1505
BstNI CCWGG 2 cut(s) 1386, 1488
BstNSI RCATGY 1 cut(s) 1181
BstSCI CCNGG 2 cut(s) 1384, 1486
BstUI CGCG 1 cut(s) 715
BstX2I RGATCY 1 cut(s) 996
BstXI CCANNNNNNTGG 1 cut(s) 1215
BstYI RGATCY 1 cut(s) 996
BsuRI GGCC 8 cut(s) 135, 180, 620, 1193, 1275, 1308, 1370, 1486
BtsCI GGATG 9 cut(s) 141, 789, 847, 1045, 1059, 1093, 1155, 1483, 1554
BtsI GCAGTG 1 cut(s) 1293
BtsIMutI CAGTG 5 cut(s) 498, 1107, 1226, 1293, 1415
Cac8I GCNNGC 4 cut(s) 206, 588, 618, 1537
CfoI GCGC 2 cut(s) 569, 1510
Cfr13I GGNCC 7 cut(s) 134, 179, 235, 347, 1191, 1204, 1306
CseI GACGC 1 cut(s) 721
Csp6I GTAC 2 cut(s) 1127, 1391
CviAII CATG 7 cut(s) 263, 284, 904, 1178, 1324, 1372, 1511
CviQI GTAC 2 cut(s) 1127, 1391
DpnI GATC 5 cut(s) 5, 117, 533, 998, 1515
DpnII GATC 5 cut(s) 3, 115, 531, 996, 1513
EaeI YGGCCR 2 cut(s) 1273, 1368
Eam1104I CTCTTC 5 cut(s) 44, 692, 756, 783, 1015
EarI CTCTTC 5 cut(s) 44, 692, 756, 783, 1015
EciI GGCGGA 1 cut(s) 605
Ecl136II GAGCTC 2 cut(s) 268, 955
Eco24I GRGCYC 2 cut(s) 270, 957
Eco47I GGWCC 3 cut(s) 235, 347, 1204
Eco53kI GAGCTC 2 cut(s) 268, 955
Eco57I CTGAAG 1 cut(s) 1525
EcoICRI GAGCTC 2 cut(s) 268, 955
EcoO109I RGGNCCY 1 cut(s) 1204
EcoRII CCWGG 2 cut(s) 1384, 1486
EcoT38I GRGCYC 2 cut(s) 270, 957
Esp3I CGTCTC 1 cut(s) 704
FaeI CATG 7 cut(s) 266, 287, 907, 1181, 1327, 1375, 1514
FalI AAGNNNNNCTT 2 cut(s) 426, 458
FaqI GGGAC 2 cut(s) 277, 1217
FatI CATG 7 cut(s) 262, 283, 903, 1177, 1323, 1371, 1510
FauI CCCGC 2 cut(s) 592, 1544
Fnu4HI GCNGC 2 cut(s) 614, 1398
FokI GGATG 9 cut(s) 128, 796, 854, 1046, 1052, 1080, 1142, 1490, 1541
FriOI GRGCYC 2 cut(s) 270, 957
Fsp4HI GCNGC 2 cut(s) 614, 1398
FspBI CTAG 3 cut(s) 239, 392, 935
GlaI GCGC 2 cut(s) 568, 1509
GluI GCNGC 2 cut(s) 614, 1398
HaeII RGCGCY 1 cut(s) 570
HaeIII GGCC 8 cut(s) 135, 180, 620, 1193, 1275, 1308, 1370, 1486
HapII CCGG 1 cut(s) 1029
HgaI GACGC 1 cut(s) 721
HhaI GCGC 2 cut(s) 569, 1510
Hin1II CATG 7 cut(s) 266, 287, 907, 1181, 1327, 1375, 1514
Hin6I GCGC 2 cut(s) 567, 1508
HinP1I GCGC 2 cut(s) 567, 1508
HindIII AAGCTT 1 cut(s) 515
HinfI GANTC 5 cut(s) 493, 553, 1034, 1248, 1405
HpaII CCGG 1 cut(s) 1029
HphI GGTGA 5 cut(s) 71, 494, 652, 1274, 1469
Hpy166II GTNNAC 1 cut(s) 1291
Hpy188I TCNGA 6 cut(s) 453, 513, 1013, 1039, 1438, 1503
Hpy188III TCNNGA 4 cut(s) 367, 979, 1114, 1469
Hpy8I GTNNAC 1 cut(s) 1291
Hpy99I CGWCG 1 cut(s) 1013
HpyCH4IV ACGT 1 cut(s) 1293
HpyCH4V TGCA 6 cut(s) 332, 338, 538, 926, 1286, 1443
HpyF10VI GCNNNNNNNGC 4 cut(s) 239, 329, 596, 1505
HpySE526I ACGT 1 cut(s) 1293
Hsp92II CATG 7 cut(s) 266, 287, 907, 1181, 1327, 1375, 1514
HspAI GCGC 2 cut(s) 567, 1508
KflI GGGWCCC 1 cut(s) 1204
Kzo9I GATC 5 cut(s) 3, 115, 531, 996, 1513
LguI GCTCTTC 1 cut(s) 756
LmnI GCTCC 2 cut(s) 213, 1504
LweI GCATC 1 cut(s) 414
MaeI CTAG 3 cut(s) 239, 392, 935
MaeII ACGT 1 cut(s) 1293
MaeIII GTNAC 1 cut(s) 1111
MalI GATC 5 cut(s) 5, 117, 533, 998, 1515
MboI GATC 5 cut(s) 3, 115, 531, 996, 1513
MboII GAAGA 8 cut(s) 5, 31, 709, 773, 800, 1032, 1043, 1459
MflI RGATCY 1 cut(s) 996
MhlI GDGCHC 3 cut(s) 270, 957, 978
MlsI TGGCCA 2 cut(s) 1275, 1370
MluCI AATT 5 cut(s) 702, 747, 860, 888, 927
MluI ACGCGT 1 cut(s) 713
MluNI TGGCCA 2 cut(s) 1275, 1370
MmeI TCCRAC 3 cut(s) 657, 816, 991
Mox20I TGGCCA 2 cut(s) 1275, 1370
MroXI GAANNNNTTC 1 cut(s) 248
MscI TGGCCA 2 cut(s) 1275, 1370
MseI TTAA 1 cut(s) 879
MslI CAYNNNNRTG 3 cut(s) 937, 1182, 1376
Msp20I TGGCCA 2 cut(s) 1275, 1370
MspA1I CMGCKG 1 cut(s) 233
MspI CCGG 1 cut(s) 1029
MspR9I CCNGG 2 cut(s) 1386, 1488
MvaI CCWGG 2 cut(s) 1386, 1488
MvnI CGCG 1 cut(s) 715
MwoI GCNNNNNNNGC 4 cut(s) 239, 329, 596, 1505
NdeII GATC 5 cut(s) 3, 115, 531, 996, 1513
NlaIII CATG 7 cut(s) 266, 287, 907, 1181, 1327, 1375, 1514
NlaIV GGNNCC 4 cut(s) 181, 1205, 1206, 1307
NmeAIII GCCGAG 2 cut(s) 111, 180
NmuCI GTSAC 1 cut(s) 1111
NspI RCATGY 1 cut(s) 1181
NspV TTCGAA 1 cut(s) 427
OliI CACNNNNGTG 1 cut(s) 937
PciI ACATGT 1 cut(s) 1177
PciSI GCTCTTC 1 cut(s) 756
PcsI WCGNNNNNNNCGW 1 cut(s) 1266
PdmI GAANNNNTTC 1 cut(s) 248
PfeI GAWTC 5 cut(s) 493, 553, 1034, 1248, 1405
PkrI GCNGC 2 cut(s) 615, 1399
PpuMI RGGWCCY 1 cut(s) 1204
PscI ACATGT 1 cut(s) 1177
Psp124BI GAGCTC 2 cut(s) 270, 957
Psp5II RGGWCCY 1 cut(s) 1204
Psp6I CCWGG 2 cut(s) 1384, 1486
PspGI CCWGG 2 cut(s) 1384, 1486
PspN4I GGNNCC 4 cut(s) 181, 1205, 1206, 1307
PspPI GGNCC 7 cut(s) 134, 179, 235, 347, 1191, 1204, 1306
PspPPI RGGWCCY 1 cut(s) 1204
PsuI RGATCY 1 cut(s) 996
RsaI GTAC 2 cut(s) 1128, 1392
RsaNI GTAC 2 cut(s) 1127, 1391
RseI CAYNNNNRTG 3 cut(s) 937, 1182, 1376
SacI GAGCTC 2 cut(s) 270, 957
SapI GCTCTTC 1 cut(s) 756
SaqAI TTAA 1 cut(s) 879
SatI GCNGC 2 cut(s) 614, 1398
Sau3AI GATC 5 cut(s) 3, 115, 531, 996, 1513
Sau96I GGNCC 7 cut(s) 134, 179, 235, 347, 1191, 1204, 1306
ScrFI CCNGG 2 cut(s) 1386, 1488
SduI GDGCHC 3 cut(s) 270, 957, 978
SfaNI GCATC 1 cut(s) 414
SfuI TTCGAA 1 cut(s) 427
SinI GGWCC 3 cut(s) 235, 347, 1204
SmiMI CAYNNNNRTG 3 cut(s) 937, 1182, 1376
SmlI CTYRAG 1 cut(s) 977
SmoI CTYRAG 1 cut(s) 977
Sse9I AATT 5 cut(s) 702, 747, 860, 888, 927
SsiI CCGC 8 cut(s) 148, 172, 233, 590, 599, 613, 1397, 1537
SspI AATATT 1 cut(s) 63
SspMI CTAG 3 cut(s) 239, 392, 935
SstI GAGCTC 2 cut(s) 270, 957
StyD4I CCNGG 2 cut(s) 1384, 1486
TaiI ACGT 1 cut(s) 1296
TaqI TCGA 4 cut(s) 427, 1003, 1018, 1416
TasI AATT 5 cut(s) 702, 747, 860, 888, 927
TatI WGTACW 1 cut(s) 1126
TauI GCSGC 2 cut(s) 616, 1400
TfiI GAWTC 5 cut(s) 493, 553, 1034, 1248, 1405
Tru1I TTAA 1 cut(s) 879
Tru9I TTAA 1 cut(s) 879
TscAI CASTG 5 cut(s) 505, 1107, 1233, 1293, 1415
TseFI GTSAC 1 cut(s) 1111
Tsp45I GTSAC 1 cut(s) 1111
TspDTI ATGAA 8 cut(s) 265, 352, 892, 1307, 1376, 1388, 1466, 1494
TspGWI ACGGA 2 cut(s) 796, 908
TspRI CASTG 5 cut(s) 505, 1107, 1233, 1293, 1415
VpaK11BI GGWCC 3 cut(s) 235, 347, 1204
XapI RAATTY 1 cut(s) 860
XceI RCATGY 1 cut(s) 1181
XcmI CCANNNNNNNNNTGG 1 cut(s) 1233
XmnI GAANNNNTTC 1 cut(s) 248
XspI CTAG 3 cut(s) 239, 392, 935
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.