Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0000807

Physical Location & Seq

Genomic Coordinates Reverse (-)

43647207 .. 43650938

Gene Structure 3732 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0350600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1887 bp

ATGGCAAGATTTTCAACACCCATACTGGGTTTGCTACTCTTGTGCTGCTTGTCAGCTCTTACAGAGGCCACGTACTCGAAATACAAAGACCCAAAACAGCCAGTGAATGCTCGAATCAGAGACCTCATGAAGCGGATGACCCTGGCCGAGAAGATTGGCCAAATGGTCCAGATCGAGCGAGAGGTTGCTACCCCTGATGTCATGACCAAGTATTTCATAGGAAGTGTGCTTAGTGGTGGTGGGAGTGTGCCGGCTCCAAAAGCATCAGCTGAAACATGGGTCAATCTTGTCAATGGAATGCAAAAGGGATCTCTATCCACCCGTCTCGGGATTCCTATGATTTATGGGATCGACGCTGTCCACGGCCACAACAATGTCTATAATGCTACCATTTTCCCTCATAATGTTGGATTGGGAGCCACCAGAGATCCTGCGCTTGTCAAGAGAATCGGAGAGGCGACTGCCCTTGAAGTCAGGGCAACAGGAATTCCTTATGCCTTTGCCCCATGTATTGCGGTTTGCAGGGATCCAAGATGGGGTAGGTGCTACGAAAGCTACAGTGAGGACCATAAGATTGTCCAAGCAATGACTGAGATCATACCTGGTTTGCAAGGAGACATGCCTCCCAGTTTCCAAAAGGGTGCTCCTTATGTTGGTGGAAAGGGAAAGGTTGCAGCCTGTGCTAAGCATTATCTAGGAGATGGTGGCACAACCAAGGGCATCAACGAGAACAACACTGTGATTGATTGGAATGGACTGCTTAGCATTCACATGCCCGCATACCTCAACTCCATCCTTAAGGGTGTTGCAACAGTTATGGTGTCTTACTCGAGTTGGAATGGAAAGAAAATGCATGCTAATCAAGACCTTGTAACAGGATATCTCAAGAACAAGCTCCGTTTCAGGGGTTTCGTCATTTCAGATTGGGAAGGCATTGACAGGATTACATCTCCTCCCAAGGCTAACTATTCATATTCAGTTCAAGCAGGAGTTAGTGCTGGAATAGACATGATCATGGTCCCCTACAACTTTACCGAGTTCATTGATGACCTGACATATCAAGTCAAGAATAATATCATCCCCATGAGCAGGATTGACGATGCTGTGAAGAGAATTTTGAGGGTTAAGTTTGTCATGGGCCTTTTTGAAAGTCCCTTGGCTGATCTCAGCCTAGCTGACCAGCTAGGAAGCAAGGAACATAGGTCATTGGCAAGGGAAGCTGTAAGAAAATCACTTGTTCTTCTAAAGAATGGAAAATCTGCAAACAAACCACTGCTTCCCCTATCCAAGAAAGCAGGAAAGATACTAATAGCAGGAAGTCATGCAGACAACTTGGGCTTTCAATGTGGAGGCTGGACGATCACATGGCAAGGCCTCGGTGGCAATAATCTTACAGTTGGTACCACAATCCTCAATGCCATGAAAACTACAGTTGATCCTACCACTCAAGTTGTCTACAACGAGAACCCTGATGCAAACTTTGTGAAGTCCAACAAATTCTCCTATGCTGTTGTTGTTGTGGGTGAGCCGCCATATGCTGAAACATTTGGAGATAGCTTGAATCTGACCATATCTGAACCTGGACTGAGCACAATCAACAATGTTTGTGGAGCTGTGAAATGTGTTGTGGTTGTTATTTCTGGCCGCCCTGTTGTGATCCAACCCTACCTTGCTAAAATTGACGCGCTTGTCGCGGCTTGGCTTCCCGGAACTGAAGGTCAAGGTGTTGCTGACGTTTTGTTTGGTGACTATGGATTCACAGGAAAGCTTGCACGTACATGGTTCAAATCAGTAGACCAGCTCCCAATGAATGTTGGTGATGCACATTATGACCCTCTATTTCCGTTTGGATTTGGTCTAACTACTAAGCCAACCAAGAATTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009717 GO:0009987 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0018130 GO:0019438 GO:0019748 GO:0033770 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044424 GO:0044464 GO:0044550 GO:0046287 GO:0046483 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00830 ko00943 ko00980 ko01100 ko01110 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00380 map00830 map00943 map00980 map01100 map01110 map04913 map04917 map04927 map04934 map05204

Pfam Domains

Protein Families

p450

Protein Analysis

628

Amino Acids

68.09

Weight (kDa)

9.09

Isoelectric Point (pI)

28.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	47 - 375	5.4e-67	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	412 - 621	3.5e-37	Glycosyl hydrolase family 3 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000807)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g34800 FvH4_5g35140 FvH4_5g35160 FvH4_6g14450 FvH4_6g14541 FvH4_6g14550 FvH4_6g14550 FvH4_6g14550 FvH4_6g14550 FvH4_6g14550 FvH4_7g16600
malus_domestica	MD03G1101300.v1.1 MD03G1101600.v1.1 MD11G1115200.v1.1 MD11G1115300.v1.1 MD11G1115400.v1.1 MD11G1115500.v1.1
prunus_persica	Prupe.6G007200_v2.0.a1 Prupe.6G086200_v2.0.a1 Prupe.6G086500_v2.0.a1
pyrus_communis	pycom03g08300 pycom03g08310 pycom11g09670 pycom11g09750
rosa_chinensis	RchiOBHm_Chr5g0062571 RchiOBHm_Chr5g0062591
rosa_laevigata	RLG00000032126 RLG00000035565 RLG00000035566 RLG00000035567 RLG00000035568
rosa_multiflora	Rmu_co8069634.1_g000001 Rmu_sc0003162.1_g000001 Rmu_sc0004988.1_g000034 Rmu_sc0010332.1_g000001 Rmu_sc0010332.1_g000004 Rmu_sc0011355.1_g000003 Rmu_sc0011355.1_g000005
rosa_roxburghii	Rroxscaffold_1G00018010 Rroxscaffold_1G00018020 Rroxscaffold_1G00018070 Rroxscaffold_4G00319860
rosa_rugosa	Rorug04G0121200 Rorug04G0121300 Rorug05G0019000 Rorug05G0019100 Rorug05G0246000 Rorug05G0350500 Rorug05G0350600
rosa_samantha	Rh5AG410500 Rh5AG410700 Rh5AG410900 Rh5BG111200 Rh5BG424600 Rh5BG424700 Rh5BG424900 Rh5CG359400 Rh5CG448300 Rh5CG448400 Rh5CG448600 Rh5DG438800 Rh5DG438900 Rh5DG439100
rosa_wichuraiana	Rw0G000790 Rw0G000810 Rw0G007980 Rw5G009910 Rw5G038650 Rw5G038660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1688
Acc65I	GGTACC	1 cut(s)	1400
AccB1I	GGYRCC	1 cut(s)	1400
AccI	GTMKAC	2 cut(s)	1455, 1794
AccII	CGCG	2 cut(s)	1685, 1694
AciI	CCGC	6 cut(s)	133, 515, 777, 1529, 1645, 1694
AclWI	GGATC	7 cut(s)	316, 356, 422, 521, 534, 1430, 1651
AcoI	YGGCCR	4 cut(s)	144, 157, 364, 1642
AcsI	RAATTY	4 cut(s)	486, 1113, 1496, 1879
AcuI	CTGAAG	1 cut(s)	1734
AfaI	GTAC	3 cut(s)	74, 1402, 1777
AfiI	CCNNNNNNNGG	6 cut(s)	26, 327, 536, 653, 904, 1089
AflII	CTTAAG	1 cut(s)	797
AgsI	TTSAA	7 cut(s)	15, 470, 983, 1148, 1343, 1561, 1786
AjnI	CCWGG	3 cut(s)	141, 601, 1579
Alw21I	GWGCWC	2 cut(s)	646, 1592
Alw26I	GTCTC	3 cut(s)	114, 329, 609
AlwI	GGATC	7 cut(s)	316, 356, 422, 521, 534, 1430, 1651
Ama87I	CYCGRG	2 cut(s)	326, 829
AoxI	GGCC	7 cut(s)	66, 144, 157, 364, 1138, 1372, 1642
ApeKI	GCWGC	2 cut(s)	45, 674
ApoI	RAATTY	4 cut(s)	486, 1113, 1496, 1879
ArsI	GACNNNNNNTTYG	2 cut(s)	1724, 1756
Asp718I	GGTACC	1 cut(s)	1400
AspLEI	GCGC	2 cut(s)	436, 1687
AspS9I	GGNCC	4 cut(s)	166, 565, 1018, 1138
AsuC2I	CCSGG	1 cut(s)	1707
AsuHPI	GGTGA	3 cut(s)	1535, 1757, 1829
AvaI	CYCGRG	2 cut(s)	326, 829
AvaII	GGWCC	3 cut(s)	166, 565, 1018
BalI	TGGCCA	1 cut(s)	159
BamHI	GGATCC	1 cut(s)	526
BanI	GGYRCC	1 cut(s)	1400
Bbv12I	GWGCWC	2 cut(s)	646, 1592
BbvI	GCAGC	2 cut(s)	32, 686
BccI	CCATC	3 cut(s)	528, 695, 800
BceAI	ACGGC	1 cut(s)	379
BciT130I	CCWGG	3 cut(s)	143, 603, 1581
BclI	TGATCA	1 cut(s)	1011
BcnI	CCSGG	1 cut(s)	1707
BcoDI	GTCTC	3 cut(s)	114, 329, 609
BfaI	CTAG	3 cut(s)	695, 1172, 1184
BfmI	CTRYAG	2 cut(s)	556, 1428
BfrI	CTTAAG	1 cut(s)	797
BglI	GCCNNNNNGGC	1 cut(s)	1380
BisI	GCNGC	5 cut(s)	46, 675, 1529, 1645, 1695
BlpI	GCTNAGC	2 cut(s)	684, 761
BlsI	GCNGC	5 cut(s)	47, 676, 1530, 1646, 1696
Bme1390I	CCNGG	4 cut(s)	143, 603, 1581, 1707
Bme18I	GGWCC	3 cut(s)	166, 565, 1018
BmeT110I	CYCGRG	2 cut(s)	326, 829
BmgT120I	GGNCC	4 cut(s)	166, 565, 1018, 1138
BmiI	GGNNCC	5 cut(s)	255, 418, 528, 1020, 1402
BmrFI	CCNGG	4 cut(s)	143, 603, 1581, 1707
BmrI	ACTGGG	2 cut(s)	35, 621
BmsI	GCATC	5 cut(s)	272, 729, 1090, 1462, 1810
BmuI	ACTGGG	2 cut(s)	35, 621
Bpu1102I	GCTNAGC	2 cut(s)	684, 761
BpuEI	CTTGAG	2 cut(s)	869, 1431
BpuMI	CCSGG	1 cut(s)	1707
BsaAI	YACGTR	2 cut(s)	72, 1775
BsaBI	GATNNNNATC	1 cut(s)	313
BsaI	GGTCTC	1 cut(s)	114
BsaJI	CCNNGG	6 cut(s)	141, 361, 714, 957, 1155, 1375
BsaXI	ACNNNNNCTCC	6 cut(s)	773, 803, 937, 967, 1484, 1514
Bsc4I	CCNNNNNNNGG	6 cut(s)	26, 327, 536, 653, 904, 1089
Bse118I	RCCGGY	1 cut(s)	250
Bse1I	ACTGG	3 cut(s)	30, 101, 627
Bse3DI	GCAATG	1 cut(s)	591
Bse8I	GATNNNNATC	1 cut(s)	313
BseBI	CCWGG	3 cut(s)	143, 603, 1581
BseDI	CCNNGG	6 cut(s)	141, 361, 714, 957, 1155, 1375
BseGI	GGATG	3 cut(s)	141, 792, 1077
BseJI	GATNNNNATC	1 cut(s)	313
BseLI	CCNNNNNNNGG	6 cut(s)	26, 327, 536, 653, 904, 1089
BseMI	GCAATG	1 cut(s)	591
BseMII	CTCAG	3 cut(s)	582, 1180, 1577
BseNI	ACTGG	3 cut(s)	30, 101, 627
BseRI	GAGGAG	1 cut(s)	942
BseXI	GCAGC	2 cut(s)	32, 686
Bsh1236I	CGCG	2 cut(s)	1685, 1694
BshFI	GGCC	7 cut(s)	68, 146, 159, 366, 1140, 1374, 1644
BshNI	GGYRCC	1 cut(s)	1400
BsiHKAI	GWGCWC	2 cut(s)	646, 1592
BsiHKCI	CYCGRG	2 cut(s)	326, 829
BsiSI	CCGG	2 cut(s)	251, 1707
BslFI	GGGAC	2 cut(s)	1004, 1137
BslI	CCNNNNNNNGG	6 cut(s)	26, 327, 536, 653, 904, 1089
BsmAI	GTCTC	3 cut(s)	114, 329, 609
BsmBI	CGTCTC	1 cut(s)	329
BsmFI	GGGAC	2 cut(s)	1004, 1137
BsmI	GAATGC	3 cut(s)	112, 303, 765
BsnI	GGCC	7 cut(s)	68, 146, 159, 366, 1140, 1374, 1644
Bso31I	GGTCTC	1 cut(s)	114
BsoBI	CYCGRG	2 cut(s)	326, 829
Bsp1286I	GDGCHC	2 cut(s)	646, 1592
Bsp1720I	GCTNAGC	2 cut(s)	684, 761
BspACI	CCGC	6 cut(s)	133, 515, 777, 1529, 1645, 1694
BspANI	GGCC	7 cut(s)	68, 146, 159, 366, 1140, 1374, 1644
BspCNI	CTCAG	3 cut(s)	583, 1179, 1578
BspFNI	CGCG	2 cut(s)	1685, 1694
BspHI	TCATGA	2 cut(s)	126, 201
BspLI	GGNNCC	5 cut(s)	255, 418, 528, 1020, 1402
BspPI	GGATC	7 cut(s)	316, 356, 422, 521, 534, 1430, 1651
BspT107I	GGYRCC	1 cut(s)	1400
BspTI	CTTAAG	1 cut(s)	797
BspTNI	GGTCTC	1 cut(s)	114
BsrDI	GCAATG	1 cut(s)	591
BsrFI	RCCGGY	1 cut(s)	250
BsrI	ACTGG	3 cut(s)	30, 101, 627
BssAI	RCCGGY	1 cut(s)	250
BssECI	CCNNGG	6 cut(s)	141, 361, 714, 957, 1155, 1375
BssT1I	CCWWGG	3 cut(s)	714, 957, 1155
Bst2UI	CCWGG	3 cut(s)	143, 603, 1581
Bst4CI	ACNGT	5 cut(s)	560, 739, 814, 1396, 1432
Bst6I	CTCTTC	1 cut(s)	1103
BstAFI	CTTAAG	1 cut(s)	797
BstAPI	GCANNNNNTGC	1 cut(s)	680
BstBAI	YACGTR	2 cut(s)	72, 1775
BstC8I	GCNNGC	4 cut(s)	252, 777, 855, 1770
BstDEI	CTNAG	7 cut(s)	230, 591, 684, 761, 1166, 1586, 1866
BstDSI	CCRYGG	1 cut(s)	361
BstF5I	GGATG	3 cut(s)	141, 792, 1077
BstFNI	CGCG	2 cut(s)	1685, 1694
BstHHI	GCGC	2 cut(s)	436, 1687
BstMAI	GTCTC	3 cut(s)	114, 329, 609
BstMWI	GCNNNNNNNGC	6 cut(s)	260, 552, 680, 1217, 1380, 1691
BstNI	CCWGG	3 cut(s)	143, 603, 1581
BstNSI	RCATGY	3 cut(s)	622, 775, 857
BstSCI	CCNGG	4 cut(s)	141, 601, 1579, 1705
BstSFI	CTRYAG	2 cut(s)	556, 1428
BstUI	CGCG	2 cut(s)	1685, 1694
BstV1I	GCAGC	2 cut(s)	32, 686
BstX2I	RGATCY	3 cut(s)	308, 427, 526
BstYI	RGATCY	3 cut(s)	308, 427, 526
BsuRI	GGCC	7 cut(s)	68, 146, 159, 366, 1140, 1374, 1644
BtgI	CCRYGG	1 cut(s)	361
BtsCI	GGATG	3 cut(s)	141, 792, 1077
BtsI	GCAGTG	1 cut(s)	1271
BtsIMutI	CAGTG	4 cut(s)	108, 565, 735, 1271
Cac8I	GCNNGC	4 cut(s)	252, 777, 855, 1770
CciI	TCATGA	2 cut(s)	126, 201
CfoI	GCGC	2 cut(s)	436, 1687
Cfr10I	RCCGGY	1 cut(s)	250
Cfr13I	GGNCC	4 cut(s)	166, 565, 1018, 1138
CseI	GACGC	2 cut(s)	362, 1691
CsiI	ACCWGGT	1 cut(s)	601
Csp6I	GTAC	3 cut(s)	73, 1401, 1776
CspCI	CAANNNNNGTGG	4 cut(s)	1432, 1467, 1588, 1623
CviQI	GTAC	3 cut(s)	73, 1401, 1776
DdeI	CTNAG	7 cut(s)	230, 591, 684, 761, 1166, 1586, 1866
DrdI	GACNNNNNNGTC	1 cut(s)	1688
DseDI	GACNNNNNNGTC	1 cut(s)	1688
EaeI	YGGCCR	4 cut(s)	144, 157, 364, 1642
Eam1104I	CTCTTC	1 cut(s)	1103
EarI	CTCTTC	1 cut(s)	1103
Eco130I	CCWWGG	3 cut(s)	714, 957, 1155
Eco147I	AGGCCT	1 cut(s)	1374
Eco31I	GGTCTC	1 cut(s)	114
Eco32I	GATATC	1 cut(s)	881
Eco47I	GGWCC	3 cut(s)	166, 565, 1018
Eco57I	CTGAAG	1 cut(s)	1734
Eco88I	CYCGRG	2 cut(s)	326, 829
EcoRI	GAATTC	1 cut(s)	486
EcoRII	CCWGG	3 cut(s)	141, 601, 1579
EcoRV	GATATC	1 cut(s)	881
EcoT14I	CCWWGG	3 cut(s)	714, 957, 1155
EcoT22I	ATGCAT	1 cut(s)	855
ErhI	CCWWGG	3 cut(s)	714, 957, 1155
Esp3I	CGTCTC	1 cut(s)	329
FaqI	GGGAC	2 cut(s)	1004, 1137
FauI	CCCGC	1 cut(s)	784
FauNDI	CATATG	1 cut(s)	1534
FbaI	TGATCA	1 cut(s)	1011
FblI	GTMKAC	2 cut(s)	1455, 1794
Fnu4HI	GCNGC	5 cut(s)	46, 675, 1529, 1645, 1695
FokI	GGATG	3 cut(s)	148, 779, 1064
Fsp4HI	GCNGC	5 cut(s)	46, 675, 1529, 1645, 1695
FspBI	CTAG	3 cut(s)	695, 1172, 1184
GlaI	GCGC	2 cut(s)	435, 1686
GluI	GCNGC	5 cut(s)	46, 675, 1529, 1645, 1695
HaeIII	GGCC	7 cut(s)	68, 146, 159, 366, 1140, 1374, 1644
HapII	CCGG	2 cut(s)	251, 1707
HgaI	GACGC	2 cut(s)	362, 1691
HhaI	GCGC	2 cut(s)	436, 1687
Hin6I	GCGC	2 cut(s)	434, 1685
HinP1I	GCGC	2 cut(s)	434, 1685
HindIII	AAGCTT	1 cut(s)	1766
HinfI	GANTC	5 cut(s)	114, 331, 447, 1561, 1755
HpaII	CCGG	2 cut(s)	251, 1707
HphI	GGTGA	3 cut(s)	1535, 1757, 1829
Hpy166II	GTNNAC	3 cut(s)	361, 1456, 1795
Hpy188I	TCNGA	5 cut(s)	119, 452, 922, 1566, 1576
Hpy188III	TCNNGA	8 cut(s)	127, 169, 202, 328, 442, 863, 886, 1066
Hpy8I	GTNNAC	3 cut(s)	361, 1456, 1795
Hpy99I	CGWCG	1 cut(s)	356
HpyAV	CCTTC	2 cut(s)	923, 1709
HpyCH4III	ACNGT	5 cut(s)	560, 739, 814, 1396, 1432
HpyCH4IV	ACGT	3 cut(s)	71, 1734, 1774
HpyF10VI	GCNNNNNNNGC	6 cut(s)	260, 552, 680, 1217, 1380, 1691
HpyF3I	CTNAG	7 cut(s)	230, 591, 684, 761, 1166, 1586, 1866
HpySE526I	ACGT	3 cut(s)	71, 1734, 1774
HspAI	GCGC	2 cut(s)	434, 1685
KpnI	GGTACC	1 cut(s)	1404
KroI	GCCGGC	1 cut(s)	250
KroNI	GCCGGC	1 cut(s)	252
Ksp22I	TGATCA	1 cut(s)	1011
LmnI	GCTCC	6 cut(s)	259, 416, 649, 900, 1610, 1806
Lsp1109I	GCAGC	2 cut(s)	32, 686
LweI	GCATC	5 cut(s)	272, 729, 1090, 1462, 1810
MabI	ACCWGGT	1 cut(s)	601
MaeI	CTAG	3 cut(s)	695, 1172, 1184
MaeII	ACGT	3 cut(s)	71, 1734, 1774
MaeIII	GTNAC	2 cut(s)	871, 1745
MboII	GAAGA	3 cut(s)	163, 1120, 1232
MflI	RGATCY	3 cut(s)	308, 427, 526
MhlI	GDGCHC	2 cut(s)	646, 1592
MlsI	TGGCCA	1 cut(s)	159
MluCI	AATT	5 cut(s)	486, 1113, 1496, 1677, 1879
MluNI	TGGCCA	1 cut(s)	159
MmeI	TCCRAC	4 cut(s)	388, 815, 1515, 1684
Mox20I	TGGCCA	1 cut(s)	159
Mph1103I	ATGCAT	1 cut(s)	855
MroNI	GCCGGC	1 cut(s)	250
MscI	TGGCCA	1 cut(s)	159
MseI	TTAA	2 cut(s)	798, 1125
MslI	CAYNNNNRTG	5 cut(s)	372, 770, 1013, 1082, 1777
Msp20I	TGGCCA	1 cut(s)	159
MspA1I	CMGCKG	1 cut(s)	269
MspCI	CTTAAG	1 cut(s)	797
MspI	CCGG	2 cut(s)	251, 1707
MspR9I	CCNGG	4 cut(s)	143, 603, 1581, 1707
Mva1269I	GAATGC	3 cut(s)	112, 303, 765
MvaI	CCWGG	3 cut(s)	143, 603, 1581
MvnI	CGCG	2 cut(s)	1685, 1694
MwoI	GCNNNNNNNGC	6 cut(s)	260, 552, 680, 1217, 1380, 1691
NaeI	GCCGGC	1 cut(s)	252
NciI	CCSGG	1 cut(s)	1707
NdeI	CATATG	1 cut(s)	1534
NgoMIV	GCCGGC	1 cut(s)	250
NlaIV	GGNNCC	5 cut(s)	255, 418, 528, 1020, 1402
NmeAIII	GCCGAG	1 cut(s)	172
NmuCI	GTSAC	1 cut(s)	1745
NsiI	ATGCAT	1 cut(s)	855
NspI	RCATGY	3 cut(s)	622, 775, 857
PaeI	GCATGC	1 cut(s)	857
PaeR7I	CTCGAG	1 cut(s)	829
PagI	TCATGA	2 cut(s)	126, 201
PceI	AGGCCT	1 cut(s)	1374
PctI	GAATGC	3 cut(s)	112, 303, 765
PdiI	GCCGGC	1 cut(s)	252
PfeI	GAWTC	5 cut(s)	114, 331, 447, 1561, 1755
PflFI	GACNNNGTC	1 cut(s)	356
PfoI	TCCNGGA	1 cut(s)	1705
PkrI	GCNGC	5 cut(s)	47, 676, 1530, 1646, 1696
Ppu21I	YACGTR	2 cut(s)	72, 1775
Psp6I	CCWGG	3 cut(s)	141, 601, 1579
PspGI	CCWGG	3 cut(s)	141, 601, 1579
PspN4I	GGNNCC	5 cut(s)	255, 418, 528, 1020, 1402
PspPI	GGNCC	4 cut(s)	166, 565, 1018, 1138
PspXI	VCTCGAGB	1 cut(s)	829
PsuI	RGATCY	3 cut(s)	308, 427, 526
PsyI	GACNNNGTC	1 cut(s)	356
PvuII	CAGCTG	1 cut(s)	269
RsaI	GTAC	3 cut(s)	74, 1402, 1777
RsaNI	GTAC	3 cut(s)	73, 1401, 1776
RseI	CAYNNNNRTG	5 cut(s)	372, 770, 1013, 1082, 1777
SaqAI	TTAA	2 cut(s)	798, 1125
SatI	GCNGC	5 cut(s)	46, 675, 1529, 1645, 1695
Sau96I	GGNCC	4 cut(s)	166, 565, 1018, 1138
ScrFI	CCNGG	4 cut(s)	143, 603, 1581, 1707
SduI	GDGCHC	2 cut(s)	646, 1592
SexAI	ACCWGGT	1 cut(s)	601
SfaNI	GCATC	5 cut(s)	272, 729, 1090, 1462, 1810
SfcI	CTRYAG	2 cut(s)	556, 1428
Sfr274I	CTCGAG	1 cut(s)	829
SinI	GGWCC	3 cut(s)	166, 565, 1018
SlaI	CTCGAG	1 cut(s)	829
SmiMI	CAYNNNNRTG	5 cut(s)	372, 770, 1013, 1082, 1777
SmlI	CTYRAG	4 cut(s)	797, 829, 884, 1446
SmoI	CTYRAG	4 cut(s)	797, 829, 884, 1446
SphI	GCATGC	1 cut(s)	857
Sse9I	AATT	5 cut(s)	486, 1113, 1496, 1677, 1879
SseBI	AGGCCT	1 cut(s)	1374
SsiI	CCGC	6 cut(s)	133, 515, 777, 1529, 1645, 1694
SspMI	CTAG	3 cut(s)	695, 1172, 1184
StuI	AGGCCT	1 cut(s)	1374
StyD4I	CCNGG	4 cut(s)	141, 601, 1579, 1705
StyI	CCWWGG	3 cut(s)	714, 957, 1155
TaaI	ACNGT	5 cut(s)	560, 739, 814, 1396, 1432
TaiI	ACGT	3 cut(s)	74, 1737, 1777
TaqI	TCGA	5 cut(s)	77, 112, 174, 351, 830
TasI	AATT	5 cut(s)	486, 1113, 1496, 1677, 1879
TauI	GCSGC	3 cut(s)	1531, 1647, 1697
TfiI	GAWTC	5 cut(s)	114, 331, 447, 1561, 1755
Tru1I	TTAA	2 cut(s)	798, 1125
Tru9I	TTAA	2 cut(s)	798, 1125
TscAI	CASTG	4 cut(s)	108, 565, 742, 1278
TseFI	GTSAC	1 cut(s)	1745
TseI	GCWGC	2 cut(s)	45, 674
Tsp45I	GTSAC	1 cut(s)	1745
TspDTI	ATGAA	6 cut(s)	143, 205, 960, 1030, 1436, 1823
TspGWI	ACGGA	2 cut(s)	887, 1833
TspRI	CASTG	4 cut(s)	108, 565, 742, 1278
Tth111I	GACNNNGTC	1 cut(s)	356
Vha464I	CTTAAG	1 cut(s)	797
VpaK11BI	GGWCC	3 cut(s)	166, 565, 1018
XapI	RAATTY	4 cut(s)	486, 1113, 1496, 1879
XceI	RCATGY	3 cut(s)	622, 775, 857
XhoI	CTCGAG	1 cut(s)	829
XmiI	GTMKAC	2 cut(s)	1455, 1794
XspI	CTAG	3 cut(s)	695, 1172, 1184
Zsp2I	ATGCAT	1 cut(s)	855

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.