Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0000807

Physical Location & Seq

Genomic Coordinates Forward (+)

7917090 .. 7919527

Gene Structure 2438 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g09670.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1593 bp

ATGGCAGTCGTTGAGCTCCTCTCCCTCTTCTCAATTCTCTTCATCGTATTTCTTCTTCTCCGACCCCTCTCTGCCTCCAAATCCCAAACCCTACTCCCTCCAAGCCCCTTTGCCCTACCCATCATCGGCCACTTCCACCTCCTCAGCCCTCTCATCCACCAATCCTTCTACAAACTCTCCCTCCAGTTCGGCCCTTTATTCTCTCTCCGCCTTGGCTCCGTCCCATGCATCGTCATTTCCTCCCCAGACCTCGCGAAAGAGTCCCTCAAGACCCACGAGCTCTCCTTCATATCCCGCTCCCAGTCCATCGCCATTGAGCGCCTCACCTACAACTCCTCCCTTGCATTTGGACCCTATGGACCTTATCATAAATTCATCAAGAAGCTCAGCCTGAATGAGTTTCTAAGCAGCCGTAGCGTCAGCAACTTTGCTTCTATTCGAACCCAAGAGTACGTAAGGCTTTTGAGGCTGTTGGCCAAGAAAGCTGAGAGTGGTGAAGCAGTTAATCTCACCGAGGAGTTACCAAAGCTTTCCAACAATGTGATCGCAAAAATGATGTTGGGGAATTCTAAGGGGTCTAGTAATGCTGAAGGCAGAGACGAGGAGGCTAGGCTTGTGGTGAGAGAGGTAACAAGAATTTTTGGGGAGTTTAATTTGTCAGATTTTGTTTGGTTCTGCAAGAAGCTGGATTTGCAGGGATTTGGAAAGAGAATTGAAGACACTCATCGGAGATTCGACACGTTGGTGGAGAAGGTTATTTCAGAACGTGAAGAACTGAGAAAGAAAAACACGAAAAATGAAGGAGGCAATGGTGGCGAGGAGGTGAAGGATTTTCTTGACATTTTGCTCCATATACTGGAAAAAGGGAGTGCCGAGTGTGAGGAGGTGGAATTCACAAGAGTGCACATCAAGGCCTTAATCATGGATTTCTTCACGGCAGGTACAGATACAACCGCCATTTCAATGGAGTGGGCACTAGCAGAGCTCATCAACCACCCAAAGGTGCTGGAGAAAGCAAGGGAGGAGATTGATCGAGTCGCTGGGAATAGACGGCTAGTCGTAGAATCAGACGGTCCAAACCTTCCATACGTACAAGCCATCATAAAAGAAACACTGAGACTGCACCCATCTGTGCCTATGATCCCAAGAAAGAGTGTACAAAAGTGTAACATTGGAAACTACGTGATCCCAGAAAACACAATGCTATTTGTGAATGCTTGGGCCATTGGAAGGGACCCAAAGTATTGGGAAAATCCTTTGCACTTTTACCCTGAAAGATTCTTAGCACCACTCAGTGGTGGAGGAGATGGAGCGAGTGCATTAGATGTTAGGGGGCAACATTTTCAGCTGCTTCCGTTTGGGACTGGGAGGAGGATATGCCCTGGTTTAAACCTAGCCCTGCAAATGCTGCCAGCCCTACTTGGTGCAATGGTTCAGTGCTTTGATTGGAAAGTTGTTGGGGCAAATCAAAAGCATACGAACGGTGGTGAACGTGTTCTGGAAATGGATGAACGGCCAGGAATGACAACTCCACGAGCCCATGATTTGATTTGTATTCCAGTGGCACGTTTTGATCCCGAGTTGTATCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009717 GO:0009987 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0018130 GO:0019438 GO:0019748 GO:0033770 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044424 GO:0044464 GO:0044550 GO:0046287 GO:0046483 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00830 ko00943 ko00980 ko01100 ko01110 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00380 map00830 map00943 map00980 map01100 map01110 map04913 map04917 map04927 map04934 map05204

Pfam Domains

Protein Families

p450

Protein Analysis

531

Amino Acids

59.54

Weight (kDa)

8.07

Isoelectric Point (pI)

40.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000807)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g34800 FvH4_5g35140 FvH4_5g35160 FvH4_6g14450 FvH4_6g14541 FvH4_6g14550 FvH4_6g14550 FvH4_6g14550 FvH4_6g14550 FvH4_6g14550 FvH4_7g16600
malus_domestica	MD03G1101300.v1.1 MD03G1101600.v1.1 MD11G1115200.v1.1 MD11G1115300.v1.1 MD11G1115400.v1.1 MD11G1115500.v1.1
prunus_persica	Prupe.6G007200_v2.0.a1 Prupe.6G086200_v2.0.a1 Prupe.6G086500_v2.0.a1
pyrus_communis	pycom03g08300 pycom03g08310 pycom11g09670 pycom11g09750
rosa_chinensis	RchiOBHm_Chr5g0062571 RchiOBHm_Chr5g0062591
rosa_laevigata	RLG00000032126 RLG00000035565 RLG00000035566 RLG00000035567 RLG00000035568
rosa_multiflora	Rmu_co8069634.1_g000001 Rmu_sc0003162.1_g000001 Rmu_sc0004988.1_g000034 Rmu_sc0010332.1_g000001 Rmu_sc0010332.1_g000004 Rmu_sc0011355.1_g000003 Rmu_sc0011355.1_g000005
rosa_roxburghii	Rroxscaffold_1G00018010 Rroxscaffold_1G00018020 Rroxscaffold_1G00018070 Rroxscaffold_4G00319860
rosa_rugosa	Rorug04G0121200 Rorug04G0121300 Rorug05G0019000 Rorug05G0019100 Rorug05G0246000 Rorug05G0350500 Rorug05G0350600
rosa_samantha	Rh5AG410500 Rh5AG410700 Rh5AG410900 Rh5BG111200 Rh5BG424600 Rh5BG424700 Rh5BG424900 Rh5CG359400 Rh5CG448300 Rh5CG448400 Rh5CG448600 Rh5DG438800 Rh5DG438900 Rh5DG439100
rosa_wichuraiana	Rw0G000790 Rw0G000810 Rw0G007980 Rw5G009910 Rw5G038650 Rw5G038660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	929
AccB7I	CCANNNNNTGG	2 cut(s)	856, 1295
AccBSI	CCGCTC	1 cut(s)	297
AccII	CGCG	1 cut(s)	254
AciI	CCGC	3 cut(s)	208, 295, 954
AclWI	GGATC	3 cut(s)	1135, 1180, 1568
AcoI	YGGCCR	3 cut(s)	127, 474, 1514
AcsI	RAATTY	4 cut(s)	371, 565, 636, 890
AcuI	CTGAAG	1 cut(s)	609
AdeI	CACNNNGTG	1 cut(s)	1295
AfaI	GTAC	4 cut(s)	452, 943, 1092, 1158
AfiI	CCNNNNNNNGG	5 cut(s)	125, 856, 1000, 1230, 1295
AflIII	ACRYGT	2 cut(s)	738, 1492
AgsI	TTSAA	2 cut(s)	716, 963
AhdI	GACNNNNNGTC	1 cut(s)	1055
AjnI	CCWGG	2 cut(s)	1381, 1516
AleI	CACNNNNGTG	2 cut(s)	743, 899
AluBI	AGCT	8 cut(s)	16, 280, 385, 485, 529, 685, 985, 1348
AluI	AGCT	8 cut(s)	16, 280, 385, 485, 529, 685, 985, 1348
Alw21I	GWGCWC	4 cut(s)	18, 282, 906, 987
Alw26I	GTCTC	2 cut(s)	591, 1111
Alw44I	GTGCAC	1 cut(s)	902
AlwI	GGATC	3 cut(s)	1135, 1180, 1568
Ama87I	CYCGRG	1 cut(s)	1577
AoxI	GGCC	6 cut(s)	127, 190, 474, 912, 1221, 1514
ApaLI	GTGCAC	1 cut(s)	902
ApeKI	GCWGC	3 cut(s)	408, 1348, 1408
ApoI	RAATTY	4 cut(s)	371, 565, 636, 890
Asp700I	GAANNNNTTC	1 cut(s)	1494
AspLEI	GCGC	1 cut(s)	321
AspS9I	GGNCC	6 cut(s)	191, 350, 359, 1073, 1221, 1234
AsuHPI	GGTGA	6 cut(s)	316, 502, 506, 631, 835, 1499
AsuII	TTCGAA	1 cut(s)	439
AvaI	CYCGRG	1 cut(s)	1577
AvaII	GGWCC	4 cut(s)	350, 359, 1073, 1234
BaeGI	GKGCMC	2 cut(s)	906, 976
BalI	TGGCCA	1 cut(s)	476
BanII	GRGCYC	4 cut(s)	18, 282, 987, 1540
BarI	GAAGNNNNNNTAC	2 cut(s)	39, 71
BauI	CACGAG	2 cut(s)	275, 1533
BbsI	GAAGAC	1 cut(s)	723
Bbv12I	GWGCWC	4 cut(s)	18, 282, 906, 987
BbvCI	CCTCAGC	1 cut(s)	143
BbvI	GCAGC	3 cut(s)	420, 1335, 1395
BccI	CCATC	5 cut(s)	128, 314, 1106, 1135, 1301
BceAI	ACGGC	4 cut(s)	396, 951, 1067, 1529
BciT130I	CCWGG	2 cut(s)	1383, 1518
BcoDI	GTCTC	2 cut(s)	591, 1111
BfaI	CTAG	5 cut(s)	579, 609, 977, 1055, 1394
BfoI	RGCGCY	1 cut(s)	322
BfuAI	ACCTGC	1 cut(s)	929
BisI	GCNGC	3 cut(s)	409, 1349, 1409
BlpI	GCTNAGC	1 cut(s)	386
BlsI	GCNGC	3 cut(s)	410, 1350, 1410
Bme1390I	CCNGG	2 cut(s)	1383, 1518
Bme18I	GGWCC	4 cut(s)	350, 359, 1073, 1234
BmeRI	GACNNNNNGTC	1 cut(s)	1055
BmeT110I	CYCGRG	1 cut(s)	1577
BmgT120I	GGNCC	6 cut(s)	191, 350, 359, 1073, 1221, 1234
BmiI	GGNNCC	4 cut(s)	217, 352, 1235, 1236
BmrFI	CCNGG	2 cut(s)	1383, 1518
BmrI	ACTGGG	2 cut(s)	295, 1374
BmsI	GCATC	1 cut(s)	237
BmuI	ACTGGG	2 cut(s)	295, 1374
BpiI	GAAGAC	1 cut(s)	723
BplI	GAGNNNNNCTC	1 cut(s)	37
BpmI	CTGGAG	2 cut(s)	167, 1028
Bpu10I	CCTNAGC	1 cut(s)	143
Bpu1102I	GCTNAGC	1 cut(s)	386
Bpu14I	TTCGAA	1 cut(s)	439
BpuEI	CTTGAG	1 cut(s)	251
BsaAI	YACGTR	3 cut(s)	454, 1090, 1183
BsaJI	CCNNGG	3 cut(s)	211, 513, 1381
BsaXI	ACNNNNNCTCC	8 cut(s)	161, 165, 191, 195, 266, 296, 320, 350
Bsc4I	CCNNNNNNNGG	5 cut(s)	125, 856, 1000, 1230, 1295
Bse1I	ACTGG	5 cut(s)	184, 301, 861, 1369, 1559
Bse3DI	GCAATG	2 cut(s)	814, 1434
BseBI	CCWGG	2 cut(s)	1383, 1518
BseDI	CCNNGG	3 cut(s)	211, 513, 1381
BseGI	GGATG	2 cut(s)	153, 1513
BseLI	CCNNNNNNNGG	5 cut(s)	125, 856, 1000, 1230, 1295
BseMI	GCAATG	2 cut(s)	814, 1434
BseMII	CTCAG	6 cut(s)	157, 400, 477, 767, 1106, 1306
BseNI	ACTGG	5 cut(s)	184, 301, 861, 1369, 1559
BseSI	GKGCMC	2 cut(s)	906, 976
BseXI	GCAGC	3 cut(s)	420, 1335, 1395
BseYI	CCCAGC	1 cut(s)	1040
BsgI	GTGCAG	1 cut(s)	1106
Bsh1236I	CGCG	1 cut(s)	254
BshFI	GGCC	6 cut(s)	129, 192, 476, 914, 1223, 1516
BsiHKAI	GWGCWC	4 cut(s)	18, 282, 906, 987
BsiHKCI	CYCGRG	1 cut(s)	1577
BslFI	GGGAC	4 cut(s)	206, 247, 1247, 1375
BslI	CCNNNNNNNGG	5 cut(s)	125, 856, 1000, 1230, 1295
BsmAI	GTCTC	2 cut(s)	591, 1111
BsmBI	CGTCTC	1 cut(s)	591
BsmFI	GGGAC	4 cut(s)	206, 247, 1247, 1375
BsmI	GAATGC	1 cut(s)	1219
BsnI	GGCC	6 cut(s)	129, 192, 476, 914, 1223, 1516
BsoBI	CYCGRG	1 cut(s)	1577
Bsp119I	TTCGAA	1 cut(s)	439
Bsp1286I	GDGCHC	6 cut(s)	18, 282, 906, 976, 987, 1540
Bsp1407I	TGTACA	1 cut(s)	1156
Bsp143I	GATC	5 cut(s)	543, 1030, 1140, 1185, 1573
Bsp1720I	GCTNAGC	1 cut(s)	386
Bsp68I	TCGCGA	1 cut(s)	254
BspACI	CCGC	3 cut(s)	208, 295, 954
BspANI	GGCC	6 cut(s)	129, 192, 476, 914, 1223, 1516
BspCNI	CTCAG	6 cut(s)	156, 399, 478, 768, 1107, 1305
BspFNI	CGCG	1 cut(s)	254
BspLI	GGNNCC	4 cut(s)	217, 352, 1235, 1236
BspMI	ACCTGC	1 cut(s)	929
BspPI	GGATC	3 cut(s)	1135, 1180, 1568
BspT104I	TTCGAA	1 cut(s)	439
BsrBI	CCGCTC	1 cut(s)	297
BsrDI	GCAATG	2 cut(s)	814, 1434
BsrGI	TGTACA	1 cut(s)	1156
BsrI	ACTGG	5 cut(s)	184, 301, 861, 1369, 1559
BssECI	CCNNGG	3 cut(s)	211, 513, 1381
BssMI	GATC	5 cut(s)	543, 1030, 1140, 1185, 1573
BssSI	CACGAG	2 cut(s)	275, 1533
BssT1I	CCWWGG	1 cut(s)	211
Bst2BI	CACGAG	2 cut(s)	275, 1533
Bst2UI	CCWGG	2 cut(s)	1383, 1518
Bst4CI	ACNGT	2 cut(s)	1073, 1484
Bst6I	CTCTTC	2 cut(s)	32, 44
BstAPI	GCANNNNNTGC	1 cut(s)	1408
BstAUI	TGTACA	1 cut(s)	1156
BstBAI	YACGTR	3 cut(s)	454, 1090, 1183
BstBI	TTCGAA	1 cut(s)	439
BstC8I	GCNNGC	1 cut(s)	1413
BstDEI	CTNAG	9 cut(s)	143, 386, 404, 486, 570, 776, 1115, 1282, 1292
BstF5I	GGATG	2 cut(s)	153, 1513
BstFNI	CGCG	1 cut(s)	254
BstH2I	RGCGCY	1 cut(s)	322
BstHHI	GCGC	1 cut(s)	321
BstKTI	GATC	5 cut(s)	546, 1033, 1143, 1188, 1576
BstMAI	GTCTC	2 cut(s)	591, 1111
BstMBI	GATC	5 cut(s)	543, 1030, 1140, 1185, 1573
BstMWI	GCNNNNNNNGC	6 cut(s)	414, 466, 482, 691, 813, 1408
BstNI	CCWGG	2 cut(s)	1383, 1518
BstSCI	CCNGG	2 cut(s)	1381, 1516
BstSLI	GKGCMC	2 cut(s)	906, 976
BstSNI	TACGTA	2 cut(s)	454, 1090
BstUI	CGCG	1 cut(s)	254
BstV1I	GCAGC	3 cut(s)	420, 1335, 1395
BstV2I	GAAGAC	1 cut(s)	723
BstXI	CCANNNNNNTGG	2 cut(s)	964, 1245
BsuRI	GGCC	6 cut(s)	129, 192, 476, 914, 1223, 1516
BtgZI	GCGATG	1 cut(s)	292
BtsCI	GGATG	2 cut(s)	153, 1513
BtsIMutI	CAGTG	4 cut(s)	1112, 1300, 1442, 1566
BtuMI	TCGCGA	1 cut(s)	254
BveI	ACCTGC	1 cut(s)	929
Cac8I	GCNNGC	1 cut(s)	1413
CfoI	GCGC	1 cut(s)	321
Cfr13I	GGNCC	6 cut(s)	191, 350, 359, 1073, 1221, 1234
CseI	GACGC	1 cut(s)	406
Csp6I	GTAC	4 cut(s)	451, 942, 1091, 1157
CviAII	CATG	3 cut(s)	225, 922, 1541
CviQI	GTAC	4 cut(s)	451, 942, 1091, 1157
DdeI	CTNAG	9 cut(s)	143, 386, 404, 486, 570, 776, 1115, 1282, 1292
DpnI	GATC	5 cut(s)	545, 1032, 1142, 1187, 1575
DpnII	GATC	5 cut(s)	543, 1030, 1140, 1185, 1573
DraI	TTTAAA	1 cut(s)	1389
DraIII	CACNNNGTG	1 cut(s)	1295
DriI	GACNNNNNGTC	1 cut(s)	1055
EaeI	YGGCCR	3 cut(s)	127, 474, 1514
Eam1104I	CTCTTC	2 cut(s)	32, 44
Eam1105I	GACNNNNNGTC	1 cut(s)	1055
EarI	CTCTTC	2 cut(s)	32, 44
EciI	GGCGGA	1 cut(s)	197
Ecl136II	GAGCTC	3 cut(s)	16, 280, 985
Eco105I	TACGTA	2 cut(s)	454, 1090
Eco130I	CCWWGG	1 cut(s)	211
Eco147I	AGGCCT	1 cut(s)	914
Eco24I	GRGCYC	4 cut(s)	18, 282, 987, 1540
Eco47I	GGWCC	4 cut(s)	350, 359, 1073, 1234
Eco53kI	GAGCTC	3 cut(s)	16, 280, 985
Eco57I	CTGAAG	1 cut(s)	609
Eco88I	CYCGRG	1 cut(s)	1577
EcoICRI	GAGCTC	3 cut(s)	16, 280, 985
EcoO109I	RGGNCCY	1 cut(s)	1234
EcoRI	GAATTC	2 cut(s)	565, 890
EcoRII	CCWGG	2 cut(s)	1381, 1516
EcoT14I	CCWWGG	1 cut(s)	211
EcoT22I	ATGCAT	1 cut(s)	230
EcoT38I	GRGCYC	4 cut(s)	18, 282, 987, 1540
ErhI	CCWWGG	1 cut(s)	211
Esp3I	CGTCTC	1 cut(s)	591
FaeI	CATG	3 cut(s)	228, 925, 1544
FaqI	GGGAC	4 cut(s)	206, 247, 1247, 1375
FatI	CATG	3 cut(s)	224, 921, 1540
FauI	CCCGC	1 cut(s)	302
Fnu4HI	GCNGC	3 cut(s)	409, 1349, 1409
FokI	GGATG	2 cut(s)	140, 1520
FriOI	GRGCYC	4 cut(s)	18, 282, 987, 1540
Fsp4HI	GCNGC	3 cut(s)	409, 1349, 1409
FspBI	CTAG	5 cut(s)	579, 609, 977, 1055, 1394
GlaI	GCGC	1 cut(s)	320
GluI	GCNGC	3 cut(s)	409, 1349, 1409
GsaI	CCCAGC	1 cut(s)	1044
GsuI	CTGGAG	2 cut(s)	167, 1028
HaeII	RGCGCY	1 cut(s)	322
HaeIII	GGCC	6 cut(s)	129, 192, 476, 914, 1223, 1516
HgaI	GACGC	1 cut(s)	406
HhaI	GCGC	1 cut(s)	321
Hin1II	CATG	3 cut(s)	228, 925, 1544
Hin6I	GCGC	1 cut(s)	319
HinP1I	GCGC	1 cut(s)	319
HindIII	AAGCTT	1 cut(s)	527
HinfI	GANTC	5 cut(s)	260, 732, 1035, 1064, 1278
HphI	GGTGA	6 cut(s)	316, 502, 506, 631, 835, 1499
Hpy166II	GTNNAC	3 cut(s)	904, 1157, 1490
Hpy188I	TCNGA	5 cut(s)	62, 661, 729, 763, 1069
Hpy188III	TCNNGA	6 cut(s)	253, 268, 379, 836, 1499, 1577
Hpy8I	GTNNAC	3 cut(s)	904, 1157, 1490
HpyAV	CCTTC	8 cut(s)	175, 295, 584, 745, 794, 820, 1091, 1224
HpyCH4III	ACNGT	2 cut(s)	1073, 1484
HpyCH4IV	ACGT	7 cut(s)	453, 740, 766, 1089, 1182, 1492, 1567
HpyF10VI	GCNNNNNNNGC	6 cut(s)	414, 466, 482, 691, 813, 1408
HpyF3I	CTNAG	9 cut(s)	143, 386, 404, 486, 570, 776, 1115, 1282, 1292
HpySE526I	ACGT	7 cut(s)	453, 740, 766, 1089, 1182, 1492, 1567
Hsp92II	CATG	3 cut(s)	228, 925, 1544
HspAI	GCGC	1 cut(s)	319
KflI	GGGWCCC	1 cut(s)	1234
Kzo9I	GATC	5 cut(s)	543, 1030, 1140, 1185, 1573
LmnI	GCTCC	5 cut(s)	21, 221, 302, 852, 1310
Lsp1109I	GCAGC	3 cut(s)	420, 1335, 1395
LweI	GCATC	1 cut(s)	237
MaeI	CTAG	5 cut(s)	579, 609, 977, 1055, 1394
MaeII	ACGT	7 cut(s)	453, 740, 766, 1089, 1182, 1492, 1567
MaeIII	GTNAC	3 cut(s)	519, 628, 1166
MalI	GATC	5 cut(s)	545, 1032, 1142, 1187, 1575
MbiI	CCGCTC	1 cut(s)	297
MboI	GATC	5 cut(s)	543, 1030, 1140, 1185, 1573
MboII	GAAGA	7 cut(s)	19, 31, 44, 47, 728, 782, 922
MhlI	GDGCHC	6 cut(s)	18, 282, 906, 976, 987, 1540
MlsI	TGGCCA	1 cut(s)	476
MluCI	AATT	7 cut(s)	33, 371, 565, 636, 652, 711, 890
MluNI	TGGCCA	1 cut(s)	476
MlyI	GAGTC	2 cut(s)	269, 1044
MmeI	TCCRAC	2 cut(s)	85, 558
Mox20I	TGGCCA	1 cut(s)	476
Mph1103I	ATGCAT	1 cut(s)	230
MroXI	GAANNNNTTC	1 cut(s)	1494
MscI	TGGCCA	1 cut(s)	476
MseI	TTAA	5 cut(s)	504, 651, 917, 1388, 1591
MslI	CAYNNNNRTG	3 cut(s)	743, 899, 962
Msp20I	TGGCCA	1 cut(s)	476
MspA1I	CMGCKG	1 cut(s)	1348
MspR9I	CCNGG	2 cut(s)	1383, 1518
MssI	GTTTAAAC	1 cut(s)	1389
Mva1269I	GAATGC	1 cut(s)	1219
MvaI	CCWGG	2 cut(s)	1383, 1518
MvnI	CGCG	1 cut(s)	254
MwoI	GCNNNNNNNGC	6 cut(s)	414, 466, 482, 691, 813, 1408
NdeII	GATC	5 cut(s)	543, 1030, 1140, 1185, 1573
NlaIII	CATG	3 cut(s)	228, 925, 1544
NlaIV	GGNNCC	4 cut(s)	217, 352, 1235, 1236
NmeAIII	GCCGAG	1 cut(s)	898
NruI	TCGCGA	1 cut(s)	254
NsiI	ATGCAT	1 cut(s)	230
NspV	TTCGAA	1 cut(s)	439
OliI	CACNNNNGTG	2 cut(s)	743, 899
PceI	AGGCCT	1 cut(s)	914
PctI	GAATGC	1 cut(s)	1219
PdmI	GAANNNNTTC	1 cut(s)	1494
PfeI	GAWTC	3 cut(s)	732, 1064, 1278
PflMI	CCANNNNNTGG	2 cut(s)	856, 1295
PkrI	GCNGC	3 cut(s)	410, 1350, 1410
PleI	GAGTC	2 cut(s)	268, 1043
PmeI	GTTTAAAC	1 cut(s)	1389
PpsI	GAGTC	2 cut(s)	268, 1043
Ppu21I	YACGTR	3 cut(s)	454, 1090, 1183
PpuMI	RGGWCCY	1 cut(s)	1234
Psp124BI	GAGCTC	3 cut(s)	18, 282, 987
Psp5II	RGGWCCY	1 cut(s)	1234
Psp6I	CCWGG	2 cut(s)	1381, 1516
PspFI	CCCAGC	1 cut(s)	1040
PspGI	CCWGG	2 cut(s)	1381, 1516
PspN4I	GGNNCC	4 cut(s)	217, 352, 1235, 1236
PspPI	GGNCC	6 cut(s)	191, 350, 359, 1073, 1221, 1234
PspPPI	RGGWCCY	1 cut(s)	1234
PvuII	CAGCTG	1 cut(s)	1348
RruI	TCGCGA	1 cut(s)	254
RsaI	GTAC	4 cut(s)	452, 943, 1092, 1158
RsaNI	GTAC	4 cut(s)	451, 942, 1091, 1157
RseI	CAYNNNNRTG	3 cut(s)	743, 899, 962
SacI	GAGCTC	3 cut(s)	18, 282, 987
SaqAI	TTAA	5 cut(s)	504, 651, 917, 1388, 1591
SatI	GCNGC	3 cut(s)	409, 1349, 1409
Sau3AI	GATC	5 cut(s)	543, 1030, 1140, 1185, 1573
Sau96I	GGNCC	6 cut(s)	191, 350, 359, 1073, 1221, 1234
SchI	GAGTC	2 cut(s)	269, 1044
ScrFI	CCNGG	2 cut(s)	1383, 1518
SduI	GDGCHC	6 cut(s)	18, 282, 906, 976, 987, 1540
SfaNI	GCATC	1 cut(s)	237
SfuI	TTCGAA	1 cut(s)	439
SinI	GGWCC	4 cut(s)	350, 359, 1073, 1234
SmiMI	CAYNNNNRTG	3 cut(s)	743, 899, 962
SmlI	CTYRAG	1 cut(s)	266
SmoI	CTYRAG	1 cut(s)	266
SnaBI	TACGTA	2 cut(s)	454, 1090
Sse9I	AATT	7 cut(s)	33, 371, 565, 636, 652, 711, 890
SseBI	AGGCCT	1 cut(s)	914
SsiI	CCGC	3 cut(s)	208, 295, 954
SspMI	CTAG	5 cut(s)	579, 609, 977, 1055, 1394
SstI	GAGCTC	3 cut(s)	18, 282, 987
StuI	AGGCCT	1 cut(s)	914
StyD4I	CCNGG	2 cut(s)	1381, 1516
StyI	CCWWGG	1 cut(s)	211
TaaI	ACNGT	2 cut(s)	1073, 1484
TaiI	ACGT	7 cut(s)	456, 743, 769, 1092, 1185, 1495, 1570
TaqI	TCGA	3 cut(s)	439, 735, 1033
TasI	AATT	7 cut(s)	33, 371, 565, 636, 652, 711, 890
TatI	WGTACW	1 cut(s)	1156
TfiI	GAWTC	3 cut(s)	732, 1064, 1278
Tru1I	TTAA	5 cut(s)	504, 651, 917, 1388, 1591
Tru9I	TTAA	5 cut(s)	504, 651, 917, 1388, 1591
TscAI	CASTG	4 cut(s)	1119, 1300, 1442, 1566
TseI	GCWGC	3 cut(s)	408, 1348, 1408
TspDTI	ATGAA	5 cut(s)	31, 277, 364, 813, 1524
TspGWI	ACGGA	2 cut(s)	208, 1344
TspRI	CASTG	4 cut(s)	1119, 1300, 1442, 1566
Van91I	CCANNNNNTGG	2 cut(s)	856, 1295
VneI	GTGCAC	1 cut(s)	902
VpaK11BI	GGWCC	4 cut(s)	350, 359, 1073, 1234
XapI	RAATTY	4 cut(s)	371, 565, 636, 890
XmnI	GAANNNNTTC	1 cut(s)	1494
XspI	CTAG	5 cut(s)	579, 609, 977, 1055, 1394
Zsp2I	ATGCAT	1 cut(s)	230

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.