pycom03g08300

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
6690395 .. 6690805
411 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g08300.1

Sequence Viewer

Length: 342 bp
ATGATTTTGGGAAGTTCTAAAGGGCCGAGTGACGAGGGCAGGGATGAGGAAGCTAGGGTTGTCATGAGAGAGGGATTTGGGAAGAGAATTGAAGATACTCATAGGAGATATGACACGTTAGTCGAGAAGGTTATTCCAGAACGTGAAGACTTGAGAAAGAAAAACATGAGAAATGGAGGAGGCAGTGGTGGCCAGGAGGAGGAGGTGGAGGAGGTGAAGGATTTTCTGGACATTTTGCTTGATTTGTTAGAAAAAGGCGGTGGTGAGATTGAGGACGTGAATTTTACAAGAGTTCATATCAAGGCTTTGATCATGGTAAAAAAATCTTTTGCTCCAAGCTGA

Protein Analysis

114

Amino Acids

12.76

Weight (kDa)

5.16

Isoelectric Point (pI)

58.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 119
AciI CCGC 1 cut(s) 258
AcoI YGGCCR 1 cut(s) 190
AcsI RAATTY 1 cut(s) 280
AfiI CCNNNNNNNGG 1 cut(s) 199
AflIII ACRYGT 1 cut(s) 114
AgsI TTSAA 1 cut(s) 92
AjiI CACGTC 1 cut(s) 277
AjnI CCWGG 1 cut(s) 192
AluBI AGCT 2 cut(s) 53, 339
AluI AGCT 2 cut(s) 53, 339
AoxI GGCC 2 cut(s) 23, 190
ApoI RAATTY 1 cut(s) 280
AspS9I GGNCC 1 cut(s) 23
AsuHPI GGTGA 2 cut(s) 226, 275
BalI TGGCCA 1 cut(s) 192
BbsI GAAGAC 1 cut(s) 153
BciT130I CCWGG 1 cut(s) 194
BclI TGATCA 1 cut(s) 309
BfaI CTAG 1 cut(s) 54
Bme1390I CCNGG 1 cut(s) 194
BmgBI CACGTC 1 cut(s) 277
BmgT120I GGNCC 1 cut(s) 23
BmrFI CCNGG 1 cut(s) 194
BpiI GAAGAC 1 cut(s) 153
BpuEI CTTGAG 1 cut(s) 172
Bsc4I CCNNNNNNNGG 1 cut(s) 199
BseBI CCWGG 1 cut(s) 194
BseGI GGATG 1 cut(s) 49
BseLI CCNNNNNNNGG 1 cut(s) 199
BseRI GAGGAG 4 cut(s) 192, 212, 215, 224
BshFI GGCC 2 cut(s) 25, 192
BslI CCNNNNNNNGG 1 cut(s) 199
BsnI GGCC 2 cut(s) 25, 192
Bsp143I GATC 1 cut(s) 309
BspACI CCGC 1 cut(s) 258
BspANI GGCC 2 cut(s) 25, 192
BspHI TCATGA 1 cut(s) 63
BssMI GATC 1 cut(s) 309
Bst2UI CCWGG 1 cut(s) 194
Bst6I CTCTTC 1 cut(s) 77
BstF5I GGATG 1 cut(s) 49
BstKTI GATC 1 cut(s) 312
BstMBI GATC 1 cut(s) 309
BstMWI GCNNNNNNNGC 1 cut(s) 189
BstNI CCWGG 1 cut(s) 194
BstSCI CCNGG 1 cut(s) 192
BstV2I GAAGAC 1 cut(s) 153
BsuRI GGCC 2 cut(s) 25, 192
BtrI CACGTC 1 cut(s) 277
BtsCI GGATG 1 cut(s) 49
BtsI GCAGTG 1 cut(s) 190
BtsIMutI CAGTG 1 cut(s) 190
CciI TCATGA 1 cut(s) 63
Cfr13I GGNCC 1 cut(s) 23
CviAII CATG 3 cut(s) 64, 166, 313
CviJI RGCY 5 cut(s) 25, 53, 192, 305, 339
CviKI_1 RGCY 5 cut(s) 25, 53, 192, 305, 339
DpnI GATC 1 cut(s) 311
DpnII GATC 1 cut(s) 309
DrdI GACNNNNNNGTC 1 cut(s) 119
DseDI GACNNNNNNGTC 1 cut(s) 119
EaeI YGGCCR 1 cut(s) 190
Eam1104I CTCTTC 1 cut(s) 77
EarI CTCTTC 1 cut(s) 77
EcoRII CCWGG 1 cut(s) 192
FaeI CATG 3 cut(s) 67, 169, 316
FaiI YATR 6 cut(s) 65, 102, 111, 167, 297, 314
FatI CATG 3 cut(s) 63, 165, 312
FbaI TGATCA 1 cut(s) 309
FokI GGATG 1 cut(s) 56
FspBI CTAG 1 cut(s) 54
HaeIII GGCC 2 cut(s) 25, 192
Hin1II CATG 3 cut(s) 67, 169, 316
HphI GGTGA 2 cut(s) 226, 275
Hpy188III TCNNGA 4 cut(s) 64, 124, 137, 227
HpyAV CCTTC 2 cut(s) 121, 211
HpyCH4IV ACGT 3 cut(s) 116, 142, 276
HpyF10VI GCNNNNNNNGC 1 cut(s) 189
HpySE526I ACGT 3 cut(s) 116, 142, 276
Hsp92II CATG 3 cut(s) 67, 169, 316
Ksp22I TGATCA 1 cut(s) 309
Kzo9I GATC 1 cut(s) 309
LmnI GCTCC 1 cut(s) 337
LpnPI CCDG 5 cut(s) 25, 150, 179, 206, 212
MaeI CTAG 1 cut(s) 54
MaeII ACGT 3 cut(s) 116, 142, 276
MaeIII GTNAC 1 cut(s) 29
MalI GATC 1 cut(s) 311
MboI GATC 1 cut(s) 309
MboII GAAGA 3 cut(s) 94, 104, 158
MlsI TGGCCA 1 cut(s) 192
MluCI AATT 2 cut(s) 87, 280
MluNI TGGCCA 1 cut(s) 192
Mox20I TGGCCA 1 cut(s) 192
MscI TGGCCA 1 cut(s) 192
Msp20I TGGCCA 1 cut(s) 192
MspR9I CCNGG 1 cut(s) 194
MvaI CCWGG 1 cut(s) 194
MwoI GCNNNNNNNGC 1 cut(s) 189
NdeII GATC 1 cut(s) 309
NlaIII CATG 3 cut(s) 67, 169, 316
NmeAIII GCCGAG 1 cut(s) 51
NmuCI GTSAC 1 cut(s) 29
PagI TCATGA 1 cut(s) 63
Psp6I CCWGG 1 cut(s) 192
PspGI CCWGG 1 cut(s) 192
PspPI GGNCC 1 cut(s) 23
Sau3AI GATC 1 cut(s) 309
Sau96I GGNCC 1 cut(s) 23
ScrFI CCNGG 1 cut(s) 194
SetI ASST 8 cut(s) 55, 119, 132, 145, 207, 216, 279, 341
SmlI CTYRAG 1 cut(s) 151
SmoI CTYRAG 1 cut(s) 151
Sse9I AATT 2 cut(s) 87, 280
SsiI CCGC 1 cut(s) 258
SspMI CTAG 1 cut(s) 54
StyD4I CCNGG 1 cut(s) 192
TaiI ACGT 3 cut(s) 119, 145, 279
TaqI TCGA 1 cut(s) 123
TasI AATT 2 cut(s) 87, 280
TscAI CASTG 1 cut(s) 190
TseFI GTSAC 1 cut(s) 29
Tsp45I GTSAC 1 cut(s) 29
TspDTI ATGAA 1 cut(s) 284
TspRI CASTG 1 cut(s) 190
XapI RAATTY 1 cut(s) 280
XspI CTAG 1 cut(s) 54
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.