Rw5G009910

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
10755140 .. 10757120
1981 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G009910.1

Sequence Viewer

Length: 1593 bp
ATGGCACTTGAGCTAGTCCTACTCTTTGTTATGGGGATTATCTCTCTTCTTATCTTTACCAGGAGAGTACTATTCCACACTCACCGTGTTCAACACCTCCCTCCAAGCCCCTTTGCTCTGCCCATCATTGGCCATTTCCACCTCCTCAGCCCTCTCATCCACCGCTCCTTCCAATCCCTTTCGCTCCGGTTTGGCCCCATATTTTCCCTCCGCCTCGGTTCCGTCCCATGCGTCGTCGTAACCTCGCCTGAGCTCGCAAAAGAGTTCCTCAAAACCCATGAACTGTCCTTCGTATCCCGCATTCAAAACACCGCCATCGAACGCATAACCTACGACTCTTCCTTAGCATTTTCGCCCTACGGAGCCTACTGGAAGTTTATCAAGAAGGTGACGGTGAATGAGCTCCTCAGCAGCCGCAGCGTCAGCAAGTTTCATTCCATTAGGGCGGATGAGTACTCTCGGCTCCTAATGCTCTTCGCCGAGAGAGCTAAGAGTTGTCTGGCTGTGAACCTAAGCGAAGAGCTGCCGAGGCTTTGCCACAATGTGATAGGCCAGATGATGCTTGGGAAGTACTCCACTGCGGTTGCGAGCAACACAGAGCGGGCTGAGGAGGCGAGGTTGGTGGTTAGGGAGGCGACGAGGATCTTCGGAGAGTTGAACTTGTGTGATTTTAATATGGTATGCAAGAAACTGGATTTGCAGGGATTTGGAAAGAGAATCGAGGACACGCATGTCAAGTTTGATGAATTGGTGGAGAAGGTTGTTAATGAGCGTGAACAACTGAGAATTAAGAACAACAAAATTAAGGGAGGAGAGGAGGATGAGAAGGAGGTCAAGGATTTTCTAAGCATCTTGCTTGATATGTTGGAAGATGAGAGTAGTGAGAGCGTGGAGGTTGGATTTTCAAGAGTTCACATTAAGGCTGTAATTACGGATTTGTTCACGGCTAGTACTGACACAACAGCTATTGCAATGGAGTGGGCGTTAGCGGAGCTCATCAATCATCCAACTGTGCTAGAAAAAGCAAGGGAGGAGATCGATAGCGTAGTTGGGAATGGACGAATAGTGGAAGAATCGGATTGTCCAAGTCTTCCATACATCCAAGCTATCATAAAAGAAACATTTAGGCTACACCCACCCGTGCCTATGGTCGCAAGAATATCGGTAGAAGACTGTAAGGTCGGGAAATATGTTATTCCGAAGAATACAATGCTCTTTGTGAACAATTGGGCCATCGGAAGAGATCCTAAAAACTGGGAAAAACCGTTGGAGTTTTGGCCTGAGAGATTCTTAGAACACATTGGAGGTGACCAGACAAGTGGAATGGATGTTAGAGGTCAACATTTTCAATATCTTCCATTTGGGACCGGGAGGAGGATATGTCCCGGTATCAACTTGACCATGAAAATGGTTCCTAGTCTAGTAGCAGCTATGATTCAGTGCTTTGATTGGAAGGTTATTCCGAGCAAGAAAATGAACAATGATGATGTTGTTGAAATGGATGAAAAGCCTGGACTGACAACTCCAAGAGCCCATGATCTTGTGTGTTCTCCAGTAGCTCGATTTAATTTATTCAACATCCTTAAACCTTGA

Protein Analysis

530

Amino Acids

60.21

Weight (kDa)

6.78

Isoelectric Point (pI)

39.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 34 - 495 1.5e-93 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 731, 1178
AccBSI CCGCTC 2 cut(s) 165, 601
AciI CCGC 9 cut(s) 163, 211, 298, 312, 415, 446, 581, 601, 989
AclWI GGATC 2 cut(s) 650, 1238
AcoI YGGCCR 1 cut(s) 130
AdeI CACNNNGTG 1 cut(s) 544
AfaI GTAC 4 cut(s) 69, 455, 572, 952
AfiI CCNNNNNNNGG 2 cut(s) 128, 1374
AgsI TTSAA 7 cut(s) 92, 305, 658, 906, 1349, 1496, 1576
AjnI CCWGG 2 cut(s) 59, 1510
Alw21I GWGCWC 3 cut(s) 255, 405, 996
AlwI GGATC 2 cut(s) 650, 1238
AoxI GGCC 5 cut(s) 130, 193, 550, 1230, 1277
ApeKI GCWGC 4 cut(s) 411, 417, 523, 1427
AspS9I GGNCC 3 cut(s) 194, 1230, 1365
AsuC2I CCSGG 2 cut(s) 1369, 1386
AsuHPI GGTGA 4 cut(s) 74, 400, 406, 1319
AvaII GGWCC 1 cut(s) 1365
BalI TGGCCA 1 cut(s) 132
BanII GRGCYC 4 cut(s) 255, 405, 996, 1534
BbsI GAAGAC 2 cut(s) 1082, 1176
Bbv12I GWGCWC 3 cut(s) 255, 405, 996
BbvCI CCTCAGC 3 cut(s) 146, 407, 606
BbvI GCAGC 4 cut(s) 423, 429, 510, 1439
BccI CCATC 3 cut(s) 131, 323, 1241
BceAI ACGGC 1 cut(s) 960
BcgI CGANNNNNNTGC 2 cut(s) 1143, 1177
BciT130I CCWGG 2 cut(s) 61, 1512
BciVI GTATCC 1 cut(s) 304
BcnI CCSGG 2 cut(s) 1369, 1386
BfaI CTAG 5 cut(s) 14, 948, 1016, 1416, 1421
BfuI GTATCC 1 cut(s) 304
BisI GCNGC 5 cut(s) 412, 415, 418, 524, 1428
BlsI GCNGC 5 cut(s) 413, 416, 419, 525, 1429
BmcAI AGTACT 4 cut(s) 69, 455, 572, 952
Bme1390I CCNGG 4 cut(s) 61, 1369, 1386, 1512
Bme18I GGWCC 1 cut(s) 1365
BmgT120I GGNCC 3 cut(s) 194, 1230, 1365
BmiI GGNNCC 6 cut(s) 196, 220, 364, 464, 1366, 1413
BmrFI CCNGG 4 cut(s) 61, 1369, 1386, 1512
BmrI ACTGGG 1 cut(s) 1264
BmsI GCATC 2 cut(s) 549, 858
BmuI ACTGGG 1 cut(s) 1264
BpiI GAAGAC 2 cut(s) 1082, 1176
BpmI CTGGAG 1 cut(s) 1536
Bpu10I CCTNAGC 6 cut(s) 146, 249, 343, 407, 512, 606
BpuEI CTTGAG 1 cut(s) 29
BpuMI CCSGG 2 cut(s) 1369, 1386
Bsa29I ATCGAT 1 cut(s) 1038
BsaJI CCNNGG 2 cut(s) 214, 527
BsaWI WCCGGW 1 cut(s) 186
BsaXI ACNNNNNCTCC 6 cut(s) 602, 632, 968, 998, 1366, 1396
Bsc4I CCNNNNNNNGG 2 cut(s) 128, 1374
Bse1I ACTGG 4 cut(s) 374, 696, 1259, 1553
Bse3DI GCAATG 1 cut(s) 978
BseBI CCWGG 2 cut(s) 61, 1512
BseCI ATCGAT 1 cut(s) 1038
BseDI CCNNGG 2 cut(s) 214, 527
BseGI GGATG 8 cut(s) 156, 454, 826, 1003, 1098, 1333, 1507, 1578
BseLI CCNNNNNNNGG 2 cut(s) 128, 1374
BseMI GCAATG 1 cut(s) 978
BseMII CTCAG 6 cut(s) 160, 240, 421, 597, 773, 1272
BseNI ACTGG 4 cut(s) 374, 696, 1259, 1553
BseRI GAGGAG 7 cut(s) 134, 395, 623, 825, 830, 1046, 1387
BseXI GCAGC 4 cut(s) 423, 429, 510, 1439
BshFI GGCC 5 cut(s) 132, 195, 552, 1232, 1279
BshVI ATCGAT 1 cut(s) 1038
BsiHKAI GWGCWC 3 cut(s) 255, 405, 996
BsiSI CCGG 3 cut(s) 187, 1368, 1386
BslFI GGGAC 3 cut(s) 209, 1368, 1378
BslI CCNNNNNNNGG 2 cut(s) 128, 1374
BsmFI GGGAC 3 cut(s) 209, 1368, 1378
BsmI GAATGC 1 cut(s) 300
BsnI GGCC 5 cut(s) 132, 195, 552, 1232, 1279
Bsp1286I GDGCHC 4 cut(s) 255, 405, 996, 1534
Bsp143I GATC 4 cut(s) 642, 1035, 1243, 1537
BspACI CCGC 9 cut(s) 163, 211, 298, 312, 415, 446, 581, 601, 989
BspANI GGCC 5 cut(s) 132, 195, 552, 1232, 1279
BspCNI CTCAG 6 cut(s) 159, 241, 420, 598, 774, 1273
BspDI ATCGAT 1 cut(s) 1038
BspLI GGNNCC 6 cut(s) 196, 220, 364, 464, 1366, 1413
BspPI GGATC 2 cut(s) 650, 1238
BspQI GCTCTTC 2 cut(s) 479, 513
BsrBI CCGCTC 2 cut(s) 165, 601
BsrDI GCAATG 1 cut(s) 978
BsrI ACTGG 4 cut(s) 374, 696, 1259, 1553
BssECI CCNNGG 2 cut(s) 214, 527
BssMI GATC 4 cut(s) 642, 1035, 1243, 1537
Bst2UI CCWGG 2 cut(s) 61, 1512
Bst4CI ACNGT 6 cut(s) 86, 285, 394, 1012, 1175, 1266
Bst6I CTCTTC 5 cut(s) 51, 343, 479, 513, 1234
BstC8I GCNNGC 3 cut(s) 255, 589, 603
BstEII GGTNACC 1 cut(s) 1307
BstF5I GGATG 8 cut(s) 156, 454, 826, 1003, 1098, 1333, 1507, 1578
BstKTI GATC 4 cut(s) 645, 1038, 1246, 1540
BstMBI GATC 4 cut(s) 642, 1035, 1243, 1537
BstMWI GCNNNNNNNGC 6 cut(s) 417, 423, 469, 485, 529, 611
BstNI CCWGG 2 cut(s) 61, 1512
BstNSI RCATGY 1 cut(s) 734
BstPI GGTNACC 1 cut(s) 1307
BstSCI CCNGG 4 cut(s) 59, 1367, 1384, 1510
BstV1I GCAGC 4 cut(s) 423, 429, 510, 1439
BstV2I GAAGAC 2 cut(s) 1082, 1176
BstX2I RGATCY 2 cut(s) 642, 1243
BstXI CCANNNNNNTGG 2 cut(s) 1319, 1408
BstYI RGATCY 2 cut(s) 642, 1243
Bsu15I ATCGAT 1 cut(s) 1038
BsuI GTATCC 1 cut(s) 304
BsuRI GGCC 5 cut(s) 132, 195, 552, 1232, 1279
BsuTUI ATCGAT 1 cut(s) 1038
BtsCI GGATG 8 cut(s) 156, 454, 826, 1003, 1098, 1333, 1507, 1578
BtsI GCAGTG 1 cut(s) 576
BtsIMutI CAGTG 2 cut(s) 576, 1445
Cac8I GCNNGC 3 cut(s) 255, 589, 603
Cfr13I GGNCC 3 cut(s) 194, 1230, 1365
ClaI ATCGAT 1 cut(s) 1038
CseI GACGC 2 cut(s) 220, 409
Csp6I GTAC 4 cut(s) 68, 454, 571, 951
CspCI CAANNNNNGTGG 2 cut(s) 565, 600
CviAII CATG 5 cut(s) 228, 278, 731, 1402, 1535
CviQI GTAC 4 cut(s) 68, 454, 571, 951
DpnI GATC 4 cut(s) 644, 1037, 1245, 1539
DpnII GATC 4 cut(s) 642, 1035, 1243, 1537
DraIII CACNNNGTG 1 cut(s) 544
DrdI GACNNNNNNGTC 2 cut(s) 731, 1178
DseDI GACNNNNNNGTC 2 cut(s) 731, 1178
EaeI YGGCCR 1 cut(s) 130
Eam1104I CTCTTC 5 cut(s) 51, 343, 479, 513, 1234
EarI CTCTTC 5 cut(s) 51, 343, 479, 513, 1234
EciI GGCGGA 2 cut(s) 200, 461
Ecl136II GAGCTC 3 cut(s) 253, 403, 994
Eco24I GRGCYC 4 cut(s) 255, 405, 996, 1534
Eco47I GGWCC 1 cut(s) 1365
Eco53kI GAGCTC 3 cut(s) 253, 403, 994
Eco91I GGTNACC 1 cut(s) 1307
EcoICRI GAGCTC 3 cut(s) 253, 403, 994
EcoO65I GGTNACC 1 cut(s) 1307
EcoRII CCWGG 2 cut(s) 59, 1510
EcoT38I GRGCYC 4 cut(s) 255, 405, 996, 1534
FaeI CATG 5 cut(s) 231, 281, 734, 1405, 1538
FaqI GGGAC 3 cut(s) 209, 1368, 1378
FatI CATG 5 cut(s) 227, 277, 730, 1401, 1534
FauI CCCGC 2 cut(s) 305, 594
Fnu4HI GCNGC 5 cut(s) 412, 415, 418, 524, 1428
FokI GGATG 8 cut(s) 143, 461, 833, 990, 1085, 1340, 1514, 1565
FriOI GRGCYC 4 cut(s) 255, 405, 996, 1534
Fsp4HI GCNGC 5 cut(s) 412, 415, 418, 524, 1428
FspBI CTAG 5 cut(s) 14, 948, 1016, 1416, 1421
GluI GCNGC 5 cut(s) 412, 415, 418, 524, 1428
GsuI CTGGAG 1 cut(s) 1536
HaeIII GGCC 5 cut(s) 132, 195, 552, 1232, 1279
HapII CCGG 3 cut(s) 187, 1368, 1386
HgaI GACGC 2 cut(s) 220, 409
Hin1II CATG 5 cut(s) 231, 281, 734, 1405, 1538
HincII GTYRAC 1 cut(s) 1340
HindII GTYRAC 1 cut(s) 1340
HinfI GANTC 5 cut(s) 335, 717, 1073, 1287, 1435
HpaII CCGG 3 cut(s) 187, 1368, 1386
HphI GGTGA 4 cut(s) 74, 400, 406, 1319
Hpy166II GTNNAC 6 cut(s) 508, 776, 913, 942, 1222, 1340
Hpy188I TCNGA 5 cut(s) 650, 1078, 1200, 1238, 1464
Hpy188III TCNNGA 3 cut(s) 382, 906, 1183
Hpy8I GTNNAC 6 cut(s) 508, 776, 913, 942, 1222, 1340
Hpy99I CGWCG 3 cut(s) 236, 239, 640
HpyAV CCTTC 6 cut(s) 178, 298, 379, 751, 820, 1447
HpyCH4III ACNGT 6 cut(s) 86, 285, 394, 1012, 1175, 1266
HpyCH4V TGCA 3 cut(s) 684, 700, 971
HpyF10VI GCNNNNNNNGC 6 cut(s) 417, 423, 469, 485, 529, 611
Hsp92II CATG 5 cut(s) 231, 281, 734, 1405, 1538
Kzo9I GATC 4 cut(s) 642, 1035, 1243, 1537
LguI GCTCTTC 2 cut(s) 479, 513
LmnI GCTCC 6 cut(s) 170, 189, 362, 408, 468, 991
Lsp1109I GCAGC 4 cut(s) 423, 429, 510, 1439
LweI GCATC 2 cut(s) 549, 858
MaeI CTAG 5 cut(s) 14, 948, 1016, 1416, 1421
MaeIII GTNAC 3 cut(s) 238, 388, 1307
MalI GATC 4 cut(s) 644, 1037, 1245, 1539
MbiI CCGCTC 2 cut(s) 165, 601
MboI GATC 4 cut(s) 642, 1035, 1243, 1537
MfeI CAATTG 1 cut(s) 1225
MflI RGATCY 2 cut(s) 642, 1243
MhlI GDGCHC 4 cut(s) 255, 405, 996, 1534
MlsI TGGCCA 1 cut(s) 132
MluCI AATT 6 cut(s) 746, 786, 801, 927, 1225, 1567
MluNI TGGCCA 1 cut(s) 132
MlyI GAGTC 1 cut(s) 329
MmeI TCCRAC 4 cut(s) 846, 877, 1031, 1248
Mox20I TGGCCA 1 cut(s) 132
MscI TGGCCA 1 cut(s) 132
MseI TTAA 7 cut(s) 672, 765, 789, 804, 918, 1566, 1584
MslI CAYNNNNRTG 1 cut(s) 1406
Msp20I TGGCCA 1 cut(s) 132
MspI CCGG 3 cut(s) 187, 1368, 1386
MspR9I CCNGG 4 cut(s) 61, 1369, 1386, 1512
MunI CAATTG 1 cut(s) 1225
Mva1269I GAATGC 1 cut(s) 300
MvaI CCWGG 2 cut(s) 61, 1512
MwoI GCNNNNNNNGC 6 cut(s) 417, 423, 469, 485, 529, 611
NciI CCSGG 2 cut(s) 1369, 1386
NdeII GATC 4 cut(s) 642, 1035, 1243, 1537
NlaIII CATG 5 cut(s) 231, 281, 734, 1405, 1538
NlaIV GGNNCC 6 cut(s) 196, 220, 364, 464, 1366, 1413
NmeAIII GCCGAG 3 cut(s) 439, 505, 552
NmuCI GTSAC 2 cut(s) 388, 1307
NspI RCATGY 1 cut(s) 734
PciSI GCTCTTC 2 cut(s) 479, 513
PctI GAATGC 1 cut(s) 300
PfeI GAWTC 4 cut(s) 717, 1073, 1287, 1435
PkrI GCNGC 5 cut(s) 413, 416, 419, 525, 1429
PleI GAGTC 1 cut(s) 329
PpsI GAGTC 1 cut(s) 329
Psp124BI GAGCTC 3 cut(s) 255, 405, 996
Psp6I CCWGG 2 cut(s) 59, 1510
PspEI GGTNACC 1 cut(s) 1307
PspGI CCWGG 2 cut(s) 59, 1510
PspN4I GGNNCC 6 cut(s) 196, 220, 364, 464, 1366, 1413
PspPI GGNCC 3 cut(s) 194, 1230, 1365
PsuI RGATCY 2 cut(s) 642, 1243
RsaI GTAC 4 cut(s) 69, 455, 572, 952
RsaNI GTAC 4 cut(s) 68, 454, 571, 951
RseI CAYNNNNRTG 1 cut(s) 1406
SacI GAGCTC 3 cut(s) 255, 405, 996
SapI GCTCTTC 2 cut(s) 479, 513
SaqAI TTAA 7 cut(s) 672, 765, 789, 804, 918, 1566, 1584
SatI GCNGC 5 cut(s) 412, 415, 418, 524, 1428
Sau3AI GATC 4 cut(s) 642, 1035, 1243, 1537
Sau96I GGNCC 3 cut(s) 194, 1230, 1365
ScaI AGTACT 4 cut(s) 69, 455, 572, 952
SchI GAGTC 1 cut(s) 329
ScrFI CCNGG 4 cut(s) 61, 1369, 1386, 1512
SduI GDGCHC 4 cut(s) 255, 405, 996, 1534
SfaNI GCATC 2 cut(s) 549, 858
SinI GGWCC 1 cut(s) 1365
SmiMI CAYNNNNRTG 1 cut(s) 1406
SmlI CTYRAG 1 cut(s) 8
SmoI CTYRAG 1 cut(s) 8
Sse9I AATT 6 cut(s) 746, 786, 801, 927, 1225, 1567
SsiI CCGC 9 cut(s) 163, 211, 298, 312, 415, 446, 581, 601, 989
SspMI CTAG 5 cut(s) 14, 948, 1016, 1416, 1421
SstI GAGCTC 3 cut(s) 255, 405, 996
StyD4I CCNGG 4 cut(s) 59, 1367, 1384, 1510
TaaI ACNGT 6 cut(s) 86, 285, 394, 1012, 1175, 1266
TaqI TCGA 4 cut(s) 318, 720, 1038, 1561
TasI AATT 6 cut(s) 746, 786, 801, 927, 1225, 1567
TatI WGTACW 4 cut(s) 67, 453, 570, 950
TauI GCSGC 1 cut(s) 417
TfiI GAWTC 4 cut(s) 717, 1073, 1287, 1435
Tru1I TTAA 7 cut(s) 672, 765, 789, 804, 918, 1566, 1584
Tru9I TTAA 7 cut(s) 672, 765, 789, 804, 918, 1566, 1584
TscAI CASTG 2 cut(s) 583, 1445
TseFI GTSAC 2 cut(s) 388, 1307
TseI GCWGC 4 cut(s) 411, 417, 523, 1427
Tsp45I GTSAC 2 cut(s) 388, 1307
TspDTI ATGAA 6 cut(s) 294, 422, 759, 1418, 1490, 1518
TspGWI ACGGA 3 cut(s) 211, 375, 947
TspRI CASTG 2 cut(s) 583, 1445
VpaK11BI GGWCC 1 cut(s) 1365
XceI RCATGY 1 cut(s) 734
XcmI CCANNNNNNNNNTGG 1 cut(s) 560
XspI CTAG 5 cut(s) 14, 948, 1016, 1416, 1421
ZrmI AGTACT 4 cut(s) 69, 455, 572, 952
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.