Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0000807

Physical Location & Seq

Genomic Coordinates Reverse (-)

43565766 .. 43568750

Gene Structure 2985 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0350500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGAAGGGAAGTACATCGTTAGTCCTGTTATGGGGAGTGTTGTGGCTATCTTTCTGGGCAGCAGAAGCAGAATACATGGCATACAAGGACCCAAAGAAGCCGATAAATGCTAGAATCAAGGACCTGATGGGCAGAATGACAGTAGCAGAAAAGGTGGGGCAGATGACGCAGCTGGAACGTGGAAATGCAACAGCTGAGATCATGAGGGGTTACTCAATAGGCAGTATACTGAGTGGCGGAGGAAGCGTACCGCGGCCGCAGGCCACTCCACAGGATTGGATCAAAATGTTCAATGACTTTCAAAACGGTTCATTGTCTAGCCGCCTTGGAATCCCTATGATTTATGGCATTGATGCTGTTCATGGCCACAATAATGCTTATAAGGCCACCATTTTCCCTCATAATGTTGGTCTTGGAGCTACCAGGGATCCAGAACTTGTGAAGAAAATTGGTTCTGCAACTGCTCTCGAAGTTAGAGCTACTGGCATTAACTATGCTTTTGCACCATGTGTTGCGGTCTGCAGAGATCCAAGATGGGGTAGATGTTACGAGAGTTACAGCGAGGATCCTGAAATCGTAAAACAAATGACTGATATCATACTTGGCTTGCAAGGCGAAATACCAGCTGATTCACGGAAGGGTGTTCCATTTGTTGGTGGAAAGGATAAGGTAGCGGCTTGCGCAAAACACTTTGTTGGAGACGGTGGTACGACCAAGGGCATCAATGAGAACAATACCGTGATTGATAAGCATGGATTATTGAACATTCACATGCCTGGTTATTACCATTCTATCATCAAGGGCGTATCCACTGTCATGGTTTCCTACTCCAGCTTGAATGGAACGAAGATGCATGCTAACCACAAGCTCGTCACCCAATTTCTTAAGAACACCCTTAAGTTCAGGGGATTTGTCATCTCTGACTGGCAGGGTATCGACAAACTTACCCATCCGGTTCATTCTGATTACCCAAAATCGGTTCTTGCTGGTATTCAAGCTGGAATTGACATGGTCATGGTTCCCTTTAATCATACCGAGTTCATTGGGATTCTAACCAATCATATCAACAACAAACTCGTCCCAATGACTCGTATTGATGATGCAGTTAGGAGAATTTTGAGAGTCAAGTTCACAATGGGTCTGTTTGAGAACCCCTTGGCTGATGAGAGCTTTGTTGACCAGCTTGGAAGCCGGGCACACAGAGATTTGGCAAGGGAAGCGGTGAGGAAGTCGCTTGTTCTTCTGAAGAATGGAGATAATGCAGATACACCAGTACTACCACTCCCTAAAAAGGCCCCAAGAATCCTAGTTGCTGGAACTCATGCTAATAATTTGGGTTATCAATGTGGTGGCTGGAGTGTCACTTGGCAAGGAGTTAGTGGAAACAACTATACTTCTGGAGCCACCATCCTAAGTGCCATCACAGCTGCAGTTGATCCCAGCACCGAAATCATCTTCAGTGAAAGTCCTGGTGCTGATTTTGTCACGGCAAACAACTTCTCCTATGCCATTGTTGTTGTTGGAGAGCTCCCTTATGCGGAGACGAACGGGGACAGTTTAAATTTGACAATTGCACAACCGGGTCCAAGCACCATCACCAATGTATGTGGCAAAGTCAAGTGTGTGGTTGTAGTAATCTCTGGCCGTCCTGTTGTGATCGAGCCCTACATTTCATTAATGGATGCTCTTGTGGCTGCATGGCTACCTGGAACTGAAGGTCAAGGAGTTACAGATGTTCTCTTTGGCGATTATGGATTTACCGGCAAGCTTCCTAGGACTTGGTTCAAGACAGTAGATCAGCTCCCTATGAATGTTGGTGACAAACATTATGATCCTCTCTTTCCATTTGGTTTTGGCCTTACAACTCAACCGATTAAGAAGTCAAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009717 GO:0009987 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0018130 GO:0019438 GO:0019748 GO:0033770 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044424 GO:0044464 GO:0044550 GO:0046287 GO:0046483 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00830 ko00943 ko00980 ko01100 ko01110 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00380 map00830 map00943 map00980 map01100 map01110 map04913 map04917 map04927 map04934 map05204

Pfam Domains

Protein Families

p450

Protein Analysis

629

Amino Acids

68.31

Weight (kDa)

8.7

Isoelectric Point (pI)

27.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	47 - 375	3e-69	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	412 - 621	2.6e-37	Glycosyl hydrolase family 3 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000807)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g34800 FvH4_5g35140 FvH4_5g35160 FvH4_6g14450 FvH4_6g14541 FvH4_6g14550 FvH4_6g14550 FvH4_6g14550 FvH4_6g14550 FvH4_6g14550 FvH4_7g16600
malus_domestica	MD03G1101300.v1.1 MD03G1101600.v1.1 MD11G1115200.v1.1 MD11G1115300.v1.1 MD11G1115400.v1.1 MD11G1115500.v1.1
prunus_persica	Prupe.6G007200_v2.0.a1 Prupe.6G086200_v2.0.a1 Prupe.6G086500_v2.0.a1
pyrus_communis	pycom03g08300 pycom03g08310 pycom11g09670 pycom11g09750
rosa_chinensis	RchiOBHm_Chr5g0062571 RchiOBHm_Chr5g0062591
rosa_laevigata	RLG00000032126 RLG00000035565 RLG00000035566 RLG00000035567 RLG00000035568
rosa_multiflora	Rmu_co8069634.1_g000001 Rmu_sc0003162.1_g000001 Rmu_sc0004988.1_g000034 Rmu_sc0010332.1_g000001 Rmu_sc0010332.1_g000004 Rmu_sc0011355.1_g000003 Rmu_sc0011355.1_g000005
rosa_roxburghii	Rroxscaffold_1G00018010 Rroxscaffold_1G00018020 Rroxscaffold_1G00018070 Rroxscaffold_4G00319860
rosa_rugosa	Rorug04G0121200 Rorug04G0121300 Rorug05G0019000 Rorug05G0019100 Rorug05G0246000 Rorug05G0350500 Rorug05G0350600
rosa_samantha	Rh5AG410500 Rh5AG410700 Rh5AG410900 Rh5BG111200 Rh5BG424600 Rh5BG424700 Rh5BG424900 Rh5CG359400 Rh5CG448300 Rh5CG448400 Rh5CG448600 Rh5DG438800 Rh5DG438900 Rh5DG439100
rosa_wichuraiana	Rw0G000790 Rw0G000810 Rw0G007980 Rw5G009910 Rw5G038650 Rw5G038660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	381
Acc16I	TGCGCA	1 cut(s)	682
AccB7I	CCANNNNNTGG	1 cut(s)	653
AccI	GTMKAC	1 cut(s)	226
AccII	CGCG	1 cut(s)	253
AciI	CCGC	9 cut(s)	237, 251, 253, 257, 322, 515, 674, 1220, 1538
AclWI	GGATC	8 cut(s)	287, 422, 435, 521, 560, 573, 1430, 1826
AcoI	YGGCCR	3 cut(s)	254, 364, 1642
AcsI	RAATTY	2 cut(s)	1113, 1561
AcuI	CTGAAG	3 cut(s)	1265, 1441, 1734
AdeI	CACNNNGTG	1 cut(s)	509
AfaI	GTAC	4 cut(s)	13, 249, 709, 1275
AfiI	CCNNNNNNNGG	6 cut(s)	31, 536, 653, 976, 1291, 1537
AflII	CTTAAG	2 cut(s)	884, 896
AgsI	TTSAA	6 cut(s)	292, 302, 763, 838, 995, 1786
AjnI	CCWGG	4 cut(s)	422, 775, 1468, 1705
Alw21I	GWGCWC	1 cut(s)	1530
Alw26I	GTCTC	2 cut(s)	693, 1535
AlwI	GGATC	8 cut(s)	287, 422, 435, 521, 560, 573, 1430, 1826
AoxI	GGCC	7 cut(s)	254, 261, 364, 384, 1293, 1642, 1855
ApeKI	GCWGC	4 cut(s)	59, 169, 1427, 1694
ApoI	RAATTY	2 cut(s)	1113, 1561
AseI	ATTAAT	1 cut(s)	1676
AspA2I	CCTAGG	1 cut(s)	1772
AspLEI	GCGC	1 cut(s)	683
AspS9I	GGNCC	4 cut(s)	88, 121, 1294, 1583
AsuC2I	CCSGG	2 cut(s)	1193, 1581
AsuHPI	GGTGA	4 cut(s)	865, 1234, 1588, 1829
AvaII	GGWCC	3 cut(s)	88, 121, 1583
AvrII	CCTAGG	1 cut(s)	1772
BaeGI	GKGCMC	1 cut(s)	1198
BaeI	ACNNNNGTAYC	2 cut(s)	1257, 1290
BalI	TGGCCA	1 cut(s)	366
BamHI	GGATCC	2 cut(s)	427, 565
BanII	GRGCYC	2 cut(s)	1530, 1665
Bbv12I	GWGCWC	1 cut(s)	1530
BbvI	GCAGC	4 cut(s)	71, 181, 1414, 1681
BccI	CCATC	6 cut(s)	121, 528, 957, 1415, 1427, 1601
BceAI	ACGGC	2 cut(s)	1503, 1629
BciT130I	CCWGG	4 cut(s)	424, 777, 1470, 1707
BciVI	GTATCC	1 cut(s)	817
BcnI	CCSGG	2 cut(s)	1193, 1581
BcoDI	GTCTC	2 cut(s)	693, 1535
BfaI	CTAG	4 cut(s)	111, 318, 1307, 1773
BfmI	CTRYAG	2 cut(s)	520, 1428
BfrI	CTTAAG	2 cut(s)	884, 896
BfuI	GTATCC	1 cut(s)	817
BisI	GCNGC	8 cut(s)	60, 170, 254, 257, 322, 675, 1428, 1695
BlnI	CCTAGG	1 cut(s)	1772
BlsI	GCNGC	8 cut(s)	61, 171, 255, 258, 323, 676, 1429, 1696
BmcAI	AGTACT	1 cut(s)	1275
Bme1390I	CCNGG	6 cut(s)	424, 777, 1193, 1470, 1581, 1707
Bme18I	GGWCC	3 cut(s)	88, 121, 1583
BmgT120I	GGNCC	4 cut(s)	88, 121, 1294, 1583
BmiI	GGNNCC	7 cut(s)	90, 429, 567, 1020, 1296, 1402, 1584
BmrFI	CCNGG	6 cut(s)	424, 777, 1193, 1470, 1581, 1707
BmsI	GCATC	5 cut(s)	343, 729, 840, 1090, 1672
BpmI	CTGGAG	3 cut(s)	814, 1375, 1419
BpuMI	CCSGG	2 cut(s)	1193, 1581
BsaJI	CCNNGG	6 cut(s)	251, 325, 423, 714, 1155, 1772
BsaWI	WCCGGW	1 cut(s)	952
BsaXI	ACNNNNNCTCC	6 cut(s)	231, 261, 1266, 1296, 1484, 1514
Bsc4I	CCNNNNNNNGG	6 cut(s)	31, 536, 653, 976, 1291, 1537
Bse118I	RCCGGY	1 cut(s)	1760
Bse1I	ACTGG	3 cut(s)	487, 929, 1271
BseBI	CCWGG	4 cut(s)	424, 777, 1470, 1707
BseDI	CCNNGG	6 cut(s)	251, 325, 423, 714, 1155, 1772
BseGI	GGATG	3 cut(s)	949, 1407, 1687
BseLI	CCNNNNNNNGG	6 cut(s)	31, 536, 653, 976, 1291, 1537
BseMII	CTCAG	2 cut(s)	186, 221
BseNI	ACTGG	3 cut(s)	487, 929, 1271
BseSI	GKGCMC	1 cut(s)	1198
BseX3I	CGGCCG	1 cut(s)	254
BseXI	GCAGC	4 cut(s)	71, 181, 1414, 1681
BseYI	CCCAGC	1 cut(s)	1439
Bsh1236I	CGCG	1 cut(s)	253
Bsh1285I	CGRYCG	1 cut(s)	257
BshFI	GGCC	7 cut(s)	256, 263, 366, 386, 1295, 1644, 1857
BsiEI	CGRYCG	1 cut(s)	257
BsiHKAI	GWGCWC	1 cut(s)	1530
BsiSI	CCGG	4 cut(s)	953, 1192, 1580, 1761
BslFI	GGGAC	2 cut(s)	1064, 1565
BslI	CCNNNNNNNGG	6 cut(s)	31, 536, 653, 976, 1291, 1537
BsmAI	GTCTC	2 cut(s)	693, 1535
BsmBI	CGTCTC	2 cut(s)	693, 1535
BsmFI	GGGAC	2 cut(s)	1064, 1565
BsnI	GGCC	7 cut(s)	256, 263, 366, 386, 1295, 1644, 1857
Bsp1286I	GDGCHC	3 cut(s)	1198, 1530, 1665
Bsp143I	GATC	9 cut(s)	198, 279, 427, 526, 565, 1435, 1656, 1795, 1831
BspACI	CCGC	9 cut(s)	237, 251, 253, 257, 322, 515, 674, 1220, 1538
BspANI	GGCC	7 cut(s)	256, 263, 366, 386, 1295, 1644, 1857
BspCNI	CTCAG	2 cut(s)	187, 222
BspFNI	CGCG	1 cut(s)	253
BspHI	TCATGA	1 cut(s)	201
BspLI	GGNNCC	7 cut(s)	90, 429, 567, 1020, 1296, 1402, 1584
BspMAI	CTGCAG	2 cut(s)	524, 1432
BspPI	GGATC	8 cut(s)	287, 422, 435, 521, 560, 573, 1430, 1826
BspTI	CTTAAG	2 cut(s)	884, 896
BsrFI	RCCGGY	1 cut(s)	1760
BsrI	ACTGG	3 cut(s)	487, 929, 1271
BssAI	RCCGGY	1 cut(s)	1760
BssECI	CCNNGG	6 cut(s)	251, 325, 423, 714, 1155, 1772
BssMI	GATC	9 cut(s)	198, 279, 427, 526, 565, 1435, 1656, 1795, 1831
BssNAI	GTATAC	1 cut(s)	227
BssT1I	CCWWGG	4 cut(s)	325, 714, 1155, 1772
Bst1107I	GTATAC	1 cut(s)	227
Bst2UI	CCWGG	4 cut(s)	424, 777, 1470, 1707
Bst4CI	ACNGT	7 cut(s)	142, 308, 704, 739, 814, 1556, 1792
BstAFI	CTTAAG	2 cut(s)	884, 896
BstC8I	GCNNGC	5 cut(s)	261, 608, 679, 855, 1766
BstDEI	CTNAG	3 cut(s)	195, 230, 1412
BstDSI	CCRYGG	1 cut(s)	251
BstF5I	GGATG	3 cut(s)	949, 1407, 1687
BstFNI	CGCG	1 cut(s)	253
BstHHI	GCGC	1 cut(s)	683
BstKTI	GATC	9 cut(s)	201, 282, 430, 529, 568, 1438, 1659, 1798, 1834
BstMAI	GTCTC	2 cut(s)	693, 1535
BstMBI	GATC	9 cut(s)	198, 279, 427, 526, 565, 1435, 1656, 1795, 1831
BstMCI	CGRYCG	1 cut(s)	257
BstMWI	GCNNNNNNNGC	9 cut(s)	65, 166, 243, 383, 612, 680, 1217, 1424, 1691
BstNI	CCWGG	4 cut(s)	424, 777, 1470, 1707
BstNSI	RCATGY	2 cut(s)	775, 857
BstSCI	CCNGG	6 cut(s)	422, 775, 1191, 1468, 1579, 1705
BstSFI	CTRYAG	2 cut(s)	520, 1428
BstSLI	GKGCMC	1 cut(s)	1198
BstUI	CGCG	1 cut(s)	253
BstV1I	GCAGC	4 cut(s)	71, 181, 1414, 1681
BstX2I	RGATCY	3 cut(s)	427, 526, 565
BstXI	CCANNNNNNTGG	2 cut(s)	276, 817
BstYI	RGATCY	3 cut(s)	427, 526, 565
BstZ17I	GTATAC	1 cut(s)	227
BstZI	CGGCCG	1 cut(s)	254
BsuI	GTATCC	1 cut(s)	817
BsuRI	GGCC	7 cut(s)	256, 263, 366, 386, 1295, 1644, 1857
BtgI	CCRYGG	1 cut(s)	251
BtsCI	GGATG	3 cut(s)	949, 1407, 1687
BtsIMutI	CAGTG	2 cut(s)	810, 1465
Cac8I	GCNNGC	5 cut(s)	261, 608, 679, 855, 1766
CciI	TCATGA	1 cut(s)	201
CciNI	GCGGCCGC	1 cut(s)	254
CfoI	GCGC	1 cut(s)	683
Cfr10I	RCCGGY	1 cut(s)	1760
Cfr13I	GGNCC	4 cut(s)	88, 121, 1294, 1583
Cfr42I	CCGCGG	1 cut(s)	254
CseI	GACGC	1 cut(s)	175
Csp6I	GTAC	4 cut(s)	12, 248, 708, 1274
CspCI	CAANNNNNGTGG	2 cut(s)	1588, 1623
CviQI	GTAC	4 cut(s)	12, 248, 708, 1274
DdeI	CTNAG	3 cut(s)	195, 230, 1412
DpnI	GATC	9 cut(s)	200, 281, 429, 528, 567, 1437, 1658, 1797, 1833
DpnII	GATC	9 cut(s)	198, 279, 427, 526, 565, 1435, 1656, 1795, 1831
DraI	TTTAAA	1 cut(s)	1560
DraIII	CACNNNGTG	1 cut(s)	509
EaeI	YGGCCR	3 cut(s)	254, 364, 1642
EagI	CGGCCG	1 cut(s)	254
EciI	GGCGGA	1 cut(s)	252
Ecl136II	GAGCTC	1 cut(s)	1528
EclXI	CGGCCG	1 cut(s)	254
Eco130I	CCWWGG	4 cut(s)	325, 714, 1155, 1772
Eco24I	GRGCYC	2 cut(s)	1530, 1665
Eco32I	GATATC	1 cut(s)	595
Eco47I	GGWCC	3 cut(s)	88, 121, 1583
Eco52I	CGGCCG	1 cut(s)	254
Eco53kI	GAGCTC	1 cut(s)	1528
Eco57I	CTGAAG	3 cut(s)	1265, 1441, 1734
EcoICRI	GAGCTC	1 cut(s)	1528
EcoO109I	RGGNCCY	3 cut(s)	88, 121, 1294
EcoRII	CCWGG	4 cut(s)	422, 775, 1468, 1705
EcoRV	GATATC	1 cut(s)	595
EcoT14I	CCWWGG	4 cut(s)	325, 714, 1155, 1772
EcoT22I	ATGCAT	1 cut(s)	855
EcoT38I	GRGCYC	2 cut(s)	1530, 1665
ErhI	CCWWGG	4 cut(s)	325, 714, 1155, 1772
Esp3I	CGTCTC	2 cut(s)	693, 1535
FaqI	GGGAC	2 cut(s)	1064, 1565
FblI	GTMKAC	1 cut(s)	226
Fnu4HI	GCNGC	8 cut(s)	60, 170, 254, 257, 322, 675, 1428, 1695
FokI	GGATG	3 cut(s)	936, 1394, 1694
FriOI	GRGCYC	2 cut(s)	1530, 1665
Fsp4HI	GCNGC	8 cut(s)	60, 170, 254, 257, 322, 675, 1428, 1695
FspBI	CTAG	4 cut(s)	111, 318, 1307, 1773
FspI	TGCGCA	1 cut(s)	682
GlaI	GCGC	1 cut(s)	682
GluI	GCNGC	8 cut(s)	60, 170, 254, 257, 322, 675, 1428, 1695
GsaI	CCCAGC	1 cut(s)	1443
GsuI	CTGGAG	3 cut(s)	814, 1375, 1419
HaeIII	GGCC	7 cut(s)	256, 263, 366, 386, 1295, 1644, 1857
HapII	CCGG	4 cut(s)	953, 1192, 1580, 1761
HgaI	GACGC	1 cut(s)	175
HhaI	GCGC	1 cut(s)	683
Hin6I	GCGC	1 cut(s)	681
HinP1I	GCGC	1 cut(s)	681
HincII	GTYRAC	1 cut(s)	1177
HindII	GTYRAC	1 cut(s)	1177
HindIII	AAGCTT	1 cut(s)	1766
HinfI	GANTC	7 cut(s)	114, 330, 629, 1048, 1087, 1122, 1302
HpaII	CCGG	4 cut(s)	953, 1192, 1580, 1761
HphI	GGTGA	4 cut(s)	865, 1234, 1588, 1829
Hpy166II	GTNNAC	3 cut(s)	227, 1131, 1177
Hpy188I	TCNGA	3 cut(s)	922, 964, 1245
Hpy188III	TCNNGA	6 cut(s)	202, 431, 467, 569, 1398, 1786
Hpy8I	GTNNAC	3 cut(s)	227, 1131, 1177
HpyAV	CCTTC	2 cut(s)	631, 1709
HpyCH4III	ACNGT	7 cut(s)	142, 308, 704, 739, 814, 1556, 1792
HpyCH4IV	ACGT	1 cut(s)	178
HpyF10VI	GCNNNNNNNGC	9 cut(s)	65, 166, 243, 383, 612, 680, 1217, 1424, 1691
HpyF3I	CTNAG	3 cut(s)	195, 230, 1412
HpySE526I	ACGT	1 cut(s)	178
HspAI	GCGC	1 cut(s)	681
KspI	CCGCGG	1 cut(s)	254
Kzo9I	GATC	9 cut(s)	198, 279, 427, 526, 565, 1435, 1656, 1795, 1831
LmnI	GCTCC	4 cut(s)	416, 1400, 1533, 1806
Lsp1109I	GCAGC	4 cut(s)	71, 181, 1414, 1681
LweI	GCATC	5 cut(s)	343, 729, 840, 1090, 1672
MaeI	CTAG	4 cut(s)	111, 318, 1307, 1773
MaeII	ACGT	1 cut(s)	178
MaeIII	GTNAC	8 cut(s)	209, 545, 554, 871, 1360, 1483, 1726, 1817
MalI	GATC	9 cut(s)	200, 281, 429, 528, 567, 1437, 1658, 1797, 1833
MboI	GATC	9 cut(s)	198, 279, 427, 526, 565, 1435, 1656, 1795, 1831
MboII	GAAGA	5 cut(s)	454, 859, 1232, 1258, 1447
MfeI	CAATTG	1 cut(s)	1569
MflI	RGATCY	3 cut(s)	427, 526, 565
MhlI	GDGCHC	3 cut(s)	1198, 1530, 1665
MlsI	TGGCCA	1 cut(s)	366
MluCI	AATT	7 cut(s)	447, 878, 1002, 1113, 1330, 1561, 1569
MluNI	TGGCCA	1 cut(s)	366
MlyI	GAGTC	2 cut(s)	1081, 1131
MmeI	TCCRAC	2 cut(s)	676, 1501
MnlI	CCTC	6 cut(s)	198, 233, 408, 556, 1218, 1845
Mox20I	TGGCCA	1 cut(s)	366
Mph1103I	ATGCAT	1 cut(s)	855
MscI	TGGCCA	1 cut(s)	366
MseI	TTAA	7 cut(s)	489, 885, 897, 1026, 1559, 1676, 1875
MslI	CAYNNNNRTG	4 cut(s)	372, 770, 815, 1013
Msp20I	TGGCCA	1 cut(s)	366
MspA1I	CMGCKG	5 cut(s)	172, 194, 253, 626, 1427
MspCI	CTTAAG	2 cut(s)	884, 896
MspI	CCGG	4 cut(s)	953, 1192, 1580, 1761
MspR9I	CCNGG	6 cut(s)	424, 777, 1193, 1470, 1581, 1707
MunI	CAATTG	1 cut(s)	1569
MvaI	CCWGG	4 cut(s)	424, 777, 1470, 1707
MvnI	CGCG	1 cut(s)	253
MwoI	GCNNNNNNNGC	9 cut(s)	65, 166, 243, 383, 612, 680, 1217, 1424, 1691
NciI	CCSGG	2 cut(s)	1193, 1581
NdeII	GATC	9 cut(s)	198, 279, 427, 526, 565, 1435, 1656, 1795, 1831
NlaIV	GGNNCC	7 cut(s)	90, 429, 567, 1020, 1296, 1402, 1584
NmuCI	GTSAC	4 cut(s)	871, 1360, 1483, 1817
NotI	GCGGCCGC	1 cut(s)	254
NsbI	TGCGCA	1 cut(s)	682
NsiI	ATGCAT	1 cut(s)	855
NspI	RCATGY	2 cut(s)	775, 857
PaeI	GCATGC	1 cut(s)	857
PagI	TCATGA	1 cut(s)	201
PfeI	GAWTC	5 cut(s)	114, 330, 629, 1048, 1302
PflFI	GACNNNGTC	1 cut(s)	1010
PflMI	CCANNNNNTGG	1 cut(s)	653
PkrI	GCNGC	8 cut(s)	61, 171, 255, 258, 323, 676, 1429, 1696
PleI	GAGTC	2 cut(s)	1081, 1130
PpsI	GAGTC	2 cut(s)	1081, 1130
PpuMI	RGGWCCY	2 cut(s)	88, 121
PshBI	ATTAAT	1 cut(s)	1676
PsiI	TTATAA	1 cut(s)	381
Psp124BI	GAGCTC	1 cut(s)	1530
Psp5II	RGGWCCY	2 cut(s)	88, 121
Psp6I	CCWGG	4 cut(s)	422, 775, 1468, 1705
PspFI	CCCAGC	1 cut(s)	1439
PspGI	CCWGG	4 cut(s)	422, 775, 1468, 1705
PspN4I	GGNNCC	7 cut(s)	90, 429, 567, 1020, 1296, 1402, 1584
PspPI	GGNCC	4 cut(s)	88, 121, 1294, 1583
PspPPI	RGGWCCY	2 cut(s)	88, 121
PstI	CTGCAG	2 cut(s)	524, 1432
PsuI	RGATCY	3 cut(s)	427, 526, 565
PsyI	GACNNNGTC	1 cut(s)	1010
PvuII	CAGCTG	4 cut(s)	172, 194, 626, 1427
RsaI	GTAC	4 cut(s)	13, 249, 709, 1275
RsaNI	GTAC	4 cut(s)	12, 248, 708, 1274
RseI	CAYNNNNRTG	4 cut(s)	372, 770, 815, 1013
SacI	GAGCTC	1 cut(s)	1530
SacII	CCGCGG	1 cut(s)	254
SaqAI	TTAA	7 cut(s)	489, 885, 897, 1026, 1559, 1676, 1875
SatI	GCNGC	8 cut(s)	60, 170, 254, 257, 322, 675, 1428, 1695
Sau3AI	GATC	9 cut(s)	198, 279, 427, 526, 565, 1435, 1656, 1795, 1831
Sau96I	GGNCC	4 cut(s)	88, 121, 1294, 1583
ScaI	AGTACT	1 cut(s)	1275
SchI	GAGTC	2 cut(s)	1081, 1131
ScrFI	CCNGG	6 cut(s)	424, 777, 1193, 1470, 1581, 1707
SduI	GDGCHC	3 cut(s)	1198, 1530, 1665
SfaNI	GCATC	5 cut(s)	343, 729, 840, 1090, 1672
SfcI	CTRYAG	2 cut(s)	520, 1428
Sfr303I	CCGCGG	1 cut(s)	254
SgrBI	CCGCGG	1 cut(s)	254
SinI	GGWCC	3 cut(s)	88, 121, 1583
SmiMI	CAYNNNNRTG	4 cut(s)	372, 770, 815, 1013
SmlI	CTYRAG	2 cut(s)	884, 896
SmoI	CTYRAG	2 cut(s)	884, 896
SphI	GCATGC	1 cut(s)	857
Sse9I	AATT	7 cut(s)	447, 878, 1002, 1113, 1330, 1561, 1569
SsiI	CCGC	9 cut(s)	237, 251, 253, 257, 322, 515, 674, 1220, 1538
SspMI	CTAG	4 cut(s)	111, 318, 1307, 1773
SstI	GAGCTC	1 cut(s)	1530
StyD4I	CCNGG	6 cut(s)	422, 775, 1191, 1468, 1579, 1705
StyI	CCWWGG	4 cut(s)	325, 714, 1155, 1772
TaaI	ACNGT	7 cut(s)	142, 308, 704, 739, 814, 1556, 1792
TaiI	ACGT	1 cut(s)	181
TaqI	TCGA	3 cut(s)	468, 936, 1659
TasI	AATT	7 cut(s)	447, 878, 1002, 1113, 1330, 1561, 1569
TatI	WGTACW	2 cut(s)	11, 1273
TauI	GCSGC	4 cut(s)	256, 259, 324, 677
TfiI	GAWTC	5 cut(s)	114, 330, 629, 1048, 1302
Tru1I	TTAA	7 cut(s)	489, 885, 897, 1026, 1559, 1676, 1875
Tru9I	TTAA	7 cut(s)	489, 885, 897, 1026, 1559, 1676, 1875
TscAI	CASTG	2 cut(s)	817, 1465
TseFI	GTSAC	4 cut(s)	871, 1360, 1483, 1817
TseI	GCWGC	4 cut(s)	59, 169, 1427, 1694
Tsp45I	GTSAC	4 cut(s)	871, 1360, 1483, 1817
TspDTI	ATGAA	7 cut(s)	17, 300, 350, 947, 1030, 1662, 1823
TspGWI	ACGGA	1 cut(s)	649
TspRI	CASTG	2 cut(s)	817, 1465
Tth111I	GACNNNGTC	1 cut(s)	1010
Van91I	CCANNNNNTGG	1 cut(s)	653
Vha464I	CTTAAG	2 cut(s)	884, 896
VpaK11BI	GGWCC	3 cut(s)	88, 121, 1583
VspI	ATTAAT	1 cut(s)	1676
XapI	RAATTY	2 cut(s)	1113, 1561
XceI	RCATGY	2 cut(s)	775, 857
XmaJI	CCTAGG	1 cut(s)	1772
XmiI	GTMKAC	1 cut(s)	226
XspI	CTAG	4 cut(s)	111, 318, 1307, 1773
ZrmI	AGTACT	1 cut(s)	1275
Zsp2I	ATGCAT	1 cut(s)	855

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.