Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0000807

Physical Location & Seq

Genomic Coordinates Reverse (-)

68728170 .. 68742095

Gene Structure 13926 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG424900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGGCAATTGAGCTAGTCTTCCTCATTCTCTTCCTTGTTTTGGCCATCTCCATAATCTCGAGAATGTTGTACCATGATCACCTTCCTCCAAGCCCCTTAGCCTTGCCCATCATCGGCCACTTGCACCTCCTTAGCCCTGTCACCCACCGCTCCCTCCACAACCTCGCATTACGGTTTGGTCCCTTATTCTCTCTTCGCCTCGGCTCTGTCCCATGCATCGTTGTAACCTCAGCGGAGCTTGCAAAAGAGTTCCTCAAAACAAACGAGAACGCCTTCATAAACCGGCCTCAGTCAATTGCAATCAATCGTATCACCTACAACGCTTCGTTTGTTTTTGCACCCTATGGACCGTACTGGAAGTTCATCAGGAAGCTGAGCATGAACGAGCTCCTAAGCAGTCGTAGCGTAGACAAGTTTCTTTCTATTCGAAACCAAGAGTGCCTTGGGCTCCTGAGGTTGTTGGCCAAGAAGGCGGAGAATTACAAAGATGTGAATCTCAGTGAGGAGCTACGGAGGCTGGGCCACAATGTGATGGGGAAGATGATGCTGGGGAAACATGCCAGTGATTCTTTCCGGGCAGAGGAGGCGAGGTTGTTGGTGCGGGAAGCCACAGAGATGTTAGGGGAGTTGAAATTGTGTGATTTTAATTGGGTTTGGAAGAAGTTGGATTTGCAAGGATTTGGGAATAAAATCGAGAACACGCATAGGAGGGTTGATAATTGGTTAGACAAGGTCATTACAGAACGAGAAGAACTGAGGAAGGAACGTAAGAAAACCAATGGAGGAGGTAATGTTGAAGAGGAGGAGGTCAAGGATTTTCTTGACATTTTACTTGATTTGTTGGACGACGAGAGCCGTGAGACTGCGGAGCTTGGATTTTCAAGAGTTCACATTAAGGCACTAATTGCGGATTTATCCGCAGCAGGTATAGATCCAATTGCCATTTCAATGGAATGGGCACTAGCAGAGCTGATTAATCACCCAAAGGTGCTTAAGAAAGCAAGAGAAGAAATCGATCAGGTTGTTAAAAGTGAACGGTTAGTTGGAGAATCGGATGGTCCAAATCTTCCATACATCCAAGCCATCATAAAAGAAACATATAGGCTACACCCACCACTGTCTTTGCTCAGGAAAAGATCTACAGAACAATGTCAAATTGGCAGATATGTCATCCATAAGAACACATTGATATTTGTGAACATTTGGGCAATTGGATGGGACCCTAAATACTGGGAAAACCCATTAAATTTTTGGCCTGAAAGATTCTTACAAGTTGATGGGAGGGACGGAACAAGCAAATTAGATGTAAGAGGACAACATTTTGAACTTATCCCATTTGGGTCTGGAAGGAGGATATGTGCTGGCATAAACTTAACCATGAAAATGCTACCTGGATTACTAGCAGCTATGATTCAGTGCTTTGATTGGAAGGTTGTTGGAACAGATCGTAAGATGAACAATACTAGTGTTCTTGATATGGATGAAGGGCCTGGACTAACAAATCCAAGGGCCCATGATCTTGTTTGTGTTCCGATAACTCGATTCAGCGCACCTAGTATTATTGATTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009717 GO:0009987 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0018130 GO:0019438 GO:0019748 GO:0033770 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044424 GO:0044464 GO:0044550 GO:0046287 GO:0046483 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00830 ko00943 ko00980 ko01100 ko01110 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00380 map00830 map00943 map00980 map01100 map01110 map04913 map04917 map04927 map04934 map05204

Pfam Domains

Protein Families

p450

Protein Analysis

523

Amino Acids

59.61

Weight (kDa)

8.33

Isoelectric Point (pI)

37.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	29 - 488	1.9e-88	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000807)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g34800 FvH4_5g35140 FvH4_5g35160 FvH4_6g14450 FvH4_6g14541 FvH4_6g14550 FvH4_6g14550 FvH4_6g14550 FvH4_6g14550 FvH4_6g14550 FvH4_7g16600
malus_domestica	MD03G1101300.v1.1 MD03G1101600.v1.1 MD11G1115200.v1.1 MD11G1115300.v1.1 MD11G1115400.v1.1 MD11G1115500.v1.1
prunus_persica	Prupe.6G007200_v2.0.a1 Prupe.6G086200_v2.0.a1 Prupe.6G086500_v2.0.a1
pyrus_communis	pycom03g08300 pycom03g08310 pycom11g09670 pycom11g09750
rosa_chinensis	RchiOBHm_Chr5g0062571 RchiOBHm_Chr5g0062591
rosa_laevigata	RLG00000032126 RLG00000035565 RLG00000035566 RLG00000035567 RLG00000035568
rosa_multiflora	Rmu_co8069634.1_g000001 Rmu_sc0003162.1_g000001 Rmu_sc0004988.1_g000034 Rmu_sc0010332.1_g000001 Rmu_sc0010332.1_g000004 Rmu_sc0011355.1_g000003 Rmu_sc0011355.1_g000005
rosa_roxburghii	Rroxscaffold_1G00018010 Rroxscaffold_1G00018020 Rroxscaffold_1G00018070 Rroxscaffold_4G00319860
rosa_rugosa	Rorug04G0121200 Rorug04G0121300 Rorug05G0019000 Rorug05G0019100 Rorug05G0246000 Rorug05G0350500 Rorug05G0350600
rosa_samantha	Rh5AG410500 Rh5AG410700 Rh5AG410900 Rh5BG111200 Rh5BG424600 Rh5BG424700 Rh5BG424900 Rh5CG359400 Rh5CG448300 Rh5CG448400 Rh5CG448600 Rh5DG438800 Rh5DG438900 Rh5DG439100
rosa_wichuraiana	Rw0G000790 Rw0G000810 Rw0G007980 Rw5G009910 Rw5G038650 Rw5G038660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	914
AccBSI	CCGCTC	1 cut(s)	150
AccI	GTMKAC	1 cut(s)	408
AciI	CCGC	7 cut(s)	148, 233, 473, 601, 866, 908, 918
AclWI	GGATC	1 cut(s)	926
AcoI	YGGCCR	3 cut(s)	42, 115, 462
AcsI	RAATTY	1 cut(s)	1246
AdeI	CACNNNGTG	1 cut(s)	529
AfaI	GTAC	2 cut(s)	71, 353
AfiI	CCNNNNNNNGG	3 cut(s)	40, 113, 580
AflII	CTTAAG	1 cut(s)	992
AgsI	TTSAA	5 cut(s)	631, 797, 882, 948, 1325
AhlI	ACTAGT	1 cut(s)	1463
AjnI	CCWGG	2 cut(s)	1390, 1489
AjuI	GAANNNNNNNTTGG	4 cut(s)	928, 960, 1026, 1058
AluBI	AGCT	8 cut(s)	13, 238, 373, 388, 508, 871, 970, 1406
AluI	AGCT	8 cut(s)	13, 238, 373, 388, 508, 871, 970, 1406
Alw21I	GWGCWC	1 cut(s)	390
Alw26I	GTCTC	1 cut(s)	854
AlwI	GGATC	1 cut(s)	926
Ama87I	CYCGRG	1 cut(s)	58
AoxI	GGCC	8 cut(s)	42, 115, 284, 462, 520, 1253, 1487, 1509
ApaI	GGGCCC	1 cut(s)	1513
ApeKI	GCWGC	2 cut(s)	920, 1403
ApoI	RAATTY	1 cut(s)	1246
AseI	ATTAAT	1 cut(s)	975
Asp700I	GAANNNNTTC	1 cut(s)	272
AspLEI	GCGC	1 cut(s)	1550
AspS9I	GGNCC	8 cut(s)	179, 347, 520, 1058, 1219, 1487, 1509, 1510
AsuC2I	CCSGG	1 cut(s)	575
AsuHPI	GGTGA	4 cut(s)	71, 133, 304, 971
AsuII	TTCGAA	1 cut(s)	427
AvaI	CYCGRG	1 cut(s)	58
AvaII	GGWCC	4 cut(s)	179, 347, 1058, 1219
AxyI	CCTNAGG	1 cut(s)	452
BaeGI	GKGCMC	2 cut(s)	961, 1513
BalI	TGGCCA	2 cut(s)	44, 464
BanII	GRGCYC	3 cut(s)	390, 450, 1513
BbsI	GAAGAC	1 cut(s)	10
Bbv12I	GWGCWC	1 cut(s)	390
BbvCI	CCTCAGC	1 cut(s)	229
BbvI	GCAGC	2 cut(s)	932, 1415
BccI	CCATC	7 cut(s)	53, 116, 526, 1049, 1091, 1209, 1271
BceAI	ACGGC	1 cut(s)	840
BciT130I	CCWGG	2 cut(s)	1392, 1491
BclI	TGATCA	1 cut(s)	76
BcnI	CCSGG	1 cut(s)	575
BcoDI	GTCTC	1 cut(s)	854
BcuI	ACTAGT	1 cut(s)	1463
BfaI	CTAG	5 cut(s)	14, 962, 1400, 1464, 1554
BfmI	CTRYAG	1 cut(s)	1140
BfrI	CTTAAG	1 cut(s)	992
BfuAI	ACCTGC	1 cut(s)	914
BglI	GCCNNNNNGGC	1 cut(s)	470
BglII	AGATCT	1 cut(s)	1136
BisI	GCNGC	2 cut(s)	921, 1404
BlpI	GCTNAGC	1 cut(s)	374
BlsI	GCNGC	2 cut(s)	922, 1405
Bme1390I	CCNGG	3 cut(s)	575, 1392, 1491
Bme18I	GGWCC	4 cut(s)	179, 347, 1058, 1219
BmeT110I	CYCGRG	1 cut(s)	58
BmgT120I	GGNCC	8 cut(s)	179, 347, 520, 1058, 1219, 1487, 1509, 1510
BmiI	GGNNCC	5 cut(s)	181, 449, 1220, 1221, 1511
BmrFI	CCNGG	3 cut(s)	575, 1392, 1491
BmrI	ACTGGG	1 cut(s)	1240
BmsI	GCATC	2 cut(s)	225, 534
BmuI	ACTGGG	1 cut(s)	1240
BpiI	GAAGAC	1 cut(s)	10
Bpu10I	CCTNAGC	5 cut(s)	97, 131, 229, 392, 1127
Bpu1102I	GCTNAGC	1 cut(s)	374
Bpu14I	TTCGAA	1 cut(s)	427
BpuMI	CCSGG	1 cut(s)	575
Bsa29I	ATCGAT	1 cut(s)	1014
BsaBI	GATNNNNATC	1 cut(s)	492
BsaJI	CCNNGG	3 cut(s)	199, 442, 1505
BsaXI	ACNNNNNCTCC	6 cut(s)	575, 605, 777, 807, 1342, 1372
Bsc4I	CCNNNNNNNGG	3 cut(s)	40, 113, 580
Bse118I	RCCGGY	1 cut(s)	282
Bse1I	ACTGG	3 cut(s)	359, 561, 1235
Bse21I	CCTNAGG	1 cut(s)	452
Bse8I	GATNNNNATC	1 cut(s)	492
BseBI	CCWGG	2 cut(s)	1392, 1491
BseCI	ATCGAT	1 cut(s)	1014
BseDI	CCNNGG	3 cut(s)	199, 442, 1505
BseGI	GGATG	5 cut(s)	1060, 1074, 1170, 1220, 1486
BseJI	GATNNNNATC	1 cut(s)	492
BseLI	CCNNNNNNNGG	3 cut(s)	40, 113, 580
BseMII	CTCAG	7 cut(s)	243, 302, 365, 443, 511, 746, 1141
BseNI	ACTGG	3 cut(s)	359, 561, 1235
BseRI	GAGGAG	5 cut(s)	518, 596, 798, 815, 818
BseSI	GKGCMC	2 cut(s)	961, 1513
BseXI	GCAGC	2 cut(s)	932, 1415
BseYI	CCCAGC	2 cut(s)	517, 547
BshFI	GGCC	8 cut(s)	44, 117, 286, 464, 522, 1255, 1489, 1511
BshVI	ATCGAT	1 cut(s)	1014
BsiHKAI	GWGCWC	1 cut(s)	390
BsiHKCI	CYCGRG	1 cut(s)	58
BsiSI	CCGG	2 cut(s)	283, 574
BslFI	GGGAC	4 cut(s)	165, 194, 1232, 1298
BslI	CCNNNNNNNGG	3 cut(s)	40, 113, 580
BsmAI	GTCTC	1 cut(s)	854
BsmFI	GGGAC	4 cut(s)	165, 194, 1232, 1298
BsnI	GGCC	8 cut(s)	44, 117, 286, 464, 522, 1255, 1489, 1511
BsoBI	CYCGRG	1 cut(s)	58
Bsp119I	TTCGAA	1 cut(s)	427
Bsp120I	GGGCCC	1 cut(s)	1509
Bsp1286I	GDGCHC	4 cut(s)	390, 450, 961, 1513
Bsp143I	GATC	6 cut(s)	76, 931, 1015, 1136, 1444, 1516
Bsp1720I	GCTNAGC	1 cut(s)	374
BspACI	CCGC	7 cut(s)	148, 233, 473, 601, 866, 908, 918
BspANI	GGCC	8 cut(s)	44, 117, 286, 464, 522, 1255, 1489, 1511
BspCNI	CTCAG	7 cut(s)	242, 301, 366, 444, 510, 747, 1140
BspDI	ATCGAT	1 cut(s)	1014
BspHI	TCATGA	1 cut(s)	1568
BspLI	GGNNCC	5 cut(s)	181, 449, 1220, 1221, 1511
BspMI	ACCTGC	1 cut(s)	914
BspPI	GGATC	1 cut(s)	926
BspT104I	TTCGAA	1 cut(s)	427
BspTI	CTTAAG	1 cut(s)	992
BsrBI	CCGCTC	1 cut(s)	150
BsrFI	RCCGGY	1 cut(s)	282
BsrI	ACTGG	3 cut(s)	359, 561, 1235
BssAI	RCCGGY	1 cut(s)	282
BssECI	CCNNGG	3 cut(s)	199, 442, 1505
BssMI	GATC	6 cut(s)	76, 931, 1015, 1136, 1444, 1516
BssT1I	CCWWGG	2 cut(s)	442, 1505
Bst2UI	CCWGG	2 cut(s)	1392, 1491
Bst4CI	ACNGT	4 cut(s)	174, 351, 1038, 1119
Bst6I	CTCTTC	3 cut(s)	35, 198, 792
BstAFI	CTTAAG	1 cut(s)	992
BstAPI	GCANNNNNTGC	1 cut(s)	905
BstBI	TTCGAA	1 cut(s)	427
BstC8I	GCNNGC	2 cut(s)	240, 1363
BstF5I	GGATG	5 cut(s)	1060, 1074, 1170, 1220, 1486
BstHHI	GCGC	1 cut(s)	1550
BstKTI	GATC	6 cut(s)	79, 934, 1018, 1139, 1447, 1519
BstMAI	GTCTC	1 cut(s)	854
BstMBI	GATC	6 cut(s)	76, 931, 1015, 1136, 1444, 1516
BstMWI	GCNNNNNNNGC	6 cut(s)	239, 402, 470, 514, 584, 905
BstNI	CCWGG	2 cut(s)	1392, 1491
BstNSI	RCATGY	1 cut(s)	560
BstSCI	CCNGG	3 cut(s)	573, 1390, 1489
BstSFI	CTRYAG	1 cut(s)	1140
BstSLI	GKGCMC	2 cut(s)	961, 1513
BstV1I	GCAGC	2 cut(s)	932, 1415
BstV2I	GAAGAC	1 cut(s)	10
BstX2I	RGATCY	2 cut(s)	931, 1136
BstXI	CCANNNNNNTGG	1 cut(s)	949
BstYI	RGATCY	2 cut(s)	931, 1136
Bsu15I	ATCGAT	1 cut(s)	1014
Bsu36I	CCTNAGG	1 cut(s)	452
BsuRI	GGCC	8 cut(s)	44, 117, 286, 464, 522, 1255, 1489, 1511
BsuTUI	ATCGAT	1 cut(s)	1014
BtsCI	GGATG	5 cut(s)	1060, 1074, 1170, 1220, 1486
BtsIMutI	CAGTG	4 cut(s)	505, 568, 1115, 1421
BveI	ACCTGC	1 cut(s)	914
Cac8I	GCNNGC	2 cut(s)	240, 1363
CciI	TCATGA	1 cut(s)	1568
CfoI	GCGC	1 cut(s)	1550
Cfr10I	RCCGGY	1 cut(s)	282
Cfr13I	GGNCC	8 cut(s)	179, 347, 520, 1058, 1219, 1487, 1509, 1510
ClaI	ATCGAT	1 cut(s)	1014
Csp6I	GTAC	2 cut(s)	70, 352
CspCI	CAANNNNNGTGG	2 cut(s)	1104, 1139
CviAII	CATG	7 cut(s)	74, 213, 379, 557, 1378, 1514, 1569
CviQI	GTAC	2 cut(s)	70, 352
DpnI	GATC	6 cut(s)	78, 933, 1017, 1138, 1446, 1518
DpnII	GATC	6 cut(s)	76, 931, 1015, 1136, 1444, 1516
DraIII	CACNNNGTG	1 cut(s)	529
EaeI	YGGCCR	3 cut(s)	42, 115, 462
Eam1104I	CTCTTC	3 cut(s)	35, 198, 792
EarI	CTCTTC	3 cut(s)	35, 198, 792
EciI	GGCGGA	1 cut(s)	488
Ecl136II	GAGCTC	1 cut(s)	388
Eco130I	CCWWGG	2 cut(s)	442, 1505
Eco24I	GRGCYC	3 cut(s)	390, 450, 1513
Eco47I	GGWCC	4 cut(s)	179, 347, 1058, 1219
Eco53kI	GAGCTC	1 cut(s)	388
Eco81I	CCTNAGG	1 cut(s)	452
Eco88I	CYCGRG	1 cut(s)	58
EcoICRI	GAGCTC	1 cut(s)	388
EcoO109I	RGGNCCY	3 cut(s)	1219, 1487, 1509
EcoRII	CCWGG	2 cut(s)	1390, 1489
EcoT14I	CCWWGG	2 cut(s)	442, 1505
EcoT22I	ATGCAT	1 cut(s)	218
EcoT38I	GRGCYC	3 cut(s)	390, 450, 1513
ErhI	CCWWGG	2 cut(s)	442, 1505
FaeI	CATG	7 cut(s)	77, 216, 382, 560, 1381, 1517, 1572
FalI	AAGNNNNNCTT	2 cut(s)	426, 458
FaqI	GGGAC	4 cut(s)	165, 194, 1232, 1298
FatI	CATG	7 cut(s)	73, 212, 378, 556, 1377, 1513, 1568
FauI	CCCGC	1 cut(s)	594
FbaI	TGATCA	1 cut(s)	76
FblI	GTMKAC	1 cut(s)	408
Fnu4HI	GCNGC	2 cut(s)	921, 1404
FokI	GGATG	5 cut(s)	1061, 1067, 1157, 1227, 1493
FriOI	GRGCYC	3 cut(s)	390, 450, 1513
Fsp4HI	GCNGC	2 cut(s)	921, 1404
FspBI	CTAG	5 cut(s)	14, 962, 1400, 1464, 1554
GlaI	GCGC	1 cut(s)	1549
GluI	GCNGC	2 cut(s)	921, 1404
GsaI	CCCAGC	2 cut(s)	521, 551
HaeIII	GGCC	8 cut(s)	44, 117, 286, 464, 522, 1255, 1489, 1511
HapII	CCGG	2 cut(s)	283, 574
HhaI	GCGC	1 cut(s)	1550
Hin1II	CATG	7 cut(s)	77, 216, 382, 560, 1381, 1517, 1572
Hin6I	GCGC	1 cut(s)	1548
HinP1I	GCGC	1 cut(s)	1548
HinfI	GANTC	7 cut(s)	493, 566, 1049, 1263, 1411, 1542, 1565
HpaII	CCGG	2 cut(s)	283, 574
HphI	GGTGA	4 cut(s)	71, 133, 304, 971
Hpy166II	GTNNAC	4 cut(s)	409, 889, 1034, 1198
Hpy188I	TCNGA	2 cut(s)	1054, 1533
Hpy8I	GTNNAC	4 cut(s)	409, 889, 1034, 1198
Hpy99I	CGWCG	1 cut(s)	851
HpyAV	CCTTC	7 cut(s)	92, 283, 463, 754, 1341, 1423, 1478
HpyCH4III	ACNGT	4 cut(s)	174, 351, 1038, 1119
HpyCH4IV	ACGT	1 cut(s)	766
HpyCH4V	TGCA	6 cut(s)	124, 216, 242, 299, 338, 673
HpyF10VI	GCNNNNNNNGC	6 cut(s)	239, 402, 470, 514, 584, 905
HpySE526I	ACGT	1 cut(s)	766
Hsp92II	CATG	7 cut(s)	77, 216, 382, 560, 1381, 1517, 1572
HspAI	GCGC	1 cut(s)	1548
KflI	GGGWCCC	1 cut(s)	1219
Ksp22I	TGATCA	1 cut(s)	76
Kzo9I	GATC	6 cut(s)	76, 931, 1015, 1136, 1444, 1516
LmnI	GCTCC	6 cut(s)	155, 235, 393, 453, 505, 868
Lsp1109I	GCAGC	2 cut(s)	932, 1415
LweI	GCATC	2 cut(s)	225, 534
MaeI	CTAG	5 cut(s)	14, 962, 1400, 1464, 1554
MaeII	ACGT	1 cut(s)	766
MaeIII	GTNAC	2 cut(s)	139, 223
MalI	GATC	6 cut(s)	78, 933, 1017, 1138, 1446, 1518
MbiI	CCGCTC	1 cut(s)	150
MboI	GATC	6 cut(s)	76, 931, 1015, 1136, 1444, 1516
MboII	GAAGA	9 cut(s)	10, 22, 185, 550, 670, 761, 809, 1019, 1058
MfeI	CAATTG	4 cut(s)	6, 294, 936, 1209
MflI	RGATCY	2 cut(s)	931, 1136
MhlI	GDGCHC	4 cut(s)	390, 450, 961, 1513
MlsI	TGGCCA	2 cut(s)	44, 464
MluNI	TGGCCA	2 cut(s)	44, 464
MmeI	TCCRAC	4 cut(s)	645, 822, 1024, 1417
Mox20I	TGGCCA	2 cut(s)	44, 464
Mph1103I	ATGCAT	1 cut(s)	218
MroXI	GAANNNNTTC	1 cut(s)	272
MscI	TGGCCA	2 cut(s)	44, 464
MseI	TTAA	7 cut(s)	645, 894, 975, 993, 1026, 1244, 1373
MslI	CAYNNNNRTG	4 cut(s)	561, 614, 947, 1382
Msp20I	TGGCCA	2 cut(s)	44, 464
MspA1I	CMGCKG	1 cut(s)	233
MspCI	CTTAAG	1 cut(s)	992
MspI	CCGG	2 cut(s)	283, 574
MspR9I	CCNGG	3 cut(s)	575, 1392, 1491
MunI	CAATTG	4 cut(s)	6, 294, 936, 1209
MvaI	CCWGG	2 cut(s)	1392, 1491
MwoI	GCNNNNNNNGC	6 cut(s)	239, 402, 470, 514, 584, 905
NciI	CCSGG	1 cut(s)	575
NdeII	GATC	6 cut(s)	76, 931, 1015, 1136, 1444, 1516
NlaIII	CATG	7 cut(s)	77, 216, 382, 560, 1381, 1517, 1572
NlaIV	GGNNCC	5 cut(s)	181, 449, 1220, 1221, 1511
NmeAIII	GCCGAG	1 cut(s)	180
NmuCI	GTSAC	1 cut(s)	139
NsiI	ATGCAT	1 cut(s)	218
NspI	RCATGY	1 cut(s)	560
NspV	TTCGAA	1 cut(s)	427
PaeR7I	CTCGAG	1 cut(s)	58
PagI	TCATGA	1 cut(s)	1568
PdmI	GAANNNNTTC	1 cut(s)	272
PfeI	GAWTC	7 cut(s)	493, 566, 1049, 1263, 1411, 1542, 1565
PflFI	GACNNNGTC	1 cut(s)	731
PkrI	GCNGC	2 cut(s)	922, 1405
PpuMI	RGGWCCY	1 cut(s)	1219
PshBI	ATTAAT	1 cut(s)	975
Psp124BI	GAGCTC	1 cut(s)	390
Psp5II	RGGWCCY	1 cut(s)	1219
Psp6I	CCWGG	2 cut(s)	1390, 1489
PspFI	CCCAGC	2 cut(s)	517, 547
PspGI	CCWGG	2 cut(s)	1390, 1489
PspN4I	GGNNCC	5 cut(s)	181, 449, 1220, 1221, 1511
PspOMI	GGGCCC	1 cut(s)	1509
PspPI	GGNCC	8 cut(s)	179, 347, 520, 1058, 1219, 1487, 1509, 1510
PspPPI	RGGWCCY	1 cut(s)	1219
PsrI	GAACNNNNNNTAC	2 cut(s)	344, 376
PsuI	RGATCY	2 cut(s)	931, 1136
PsyI	GACNNNGTC	1 cut(s)	731
RsaI	GTAC	2 cut(s)	71, 353
RsaNI	GTAC	2 cut(s)	70, 352
RseI	CAYNNNNRTG	4 cut(s)	561, 614, 947, 1382
SacI	GAGCTC	1 cut(s)	390
SaqAI	TTAA	7 cut(s)	645, 894, 975, 993, 1026, 1244, 1373
SatI	GCNGC	2 cut(s)	921, 1404
Sau3AI	GATC	6 cut(s)	76, 931, 1015, 1136, 1444, 1516
Sau96I	GGNCC	8 cut(s)	179, 347, 520, 1058, 1219, 1487, 1509, 1510
ScrFI	CCNGG	3 cut(s)	575, 1392, 1491
SduI	GDGCHC	4 cut(s)	390, 450, 961, 1513
SfaNI	GCATC	2 cut(s)	225, 534
SfcI	CTRYAG	1 cut(s)	1140
Sfr274I	CTCGAG	1 cut(s)	58
SfuI	TTCGAA	1 cut(s)	427
SinI	GGWCC	4 cut(s)	179, 347, 1058, 1219
SlaI	CTCGAG	1 cut(s)	58
SmiMI	CAYNNNNRTG	4 cut(s)	561, 614, 947, 1382
SmlI	CTYRAG	2 cut(s)	58, 992
SmoI	CTYRAG	2 cut(s)	58, 992
SpeI	ACTAGT	1 cut(s)	1463
SsiI	CCGC	7 cut(s)	148, 233, 473, 601, 866, 908, 918
SspMI	CTAG	5 cut(s)	14, 962, 1400, 1464, 1554
SstI	GAGCTC	1 cut(s)	390
StyD4I	CCNGG	3 cut(s)	573, 1390, 1489
StyI	CCWWGG	2 cut(s)	442, 1505
TaaI	ACNGT	4 cut(s)	174, 351, 1038, 1119
TaiI	ACGT	1 cut(s)	769
TaqI	TCGA	5 cut(s)	59, 427, 693, 1014, 1540
TfiI	GAWTC	7 cut(s)	493, 566, 1049, 1263, 1411, 1542, 1565
Tru1I	TTAA	7 cut(s)	645, 894, 975, 993, 1026, 1244, 1373
Tru9I	TTAA	7 cut(s)	645, 894, 975, 993, 1026, 1244, 1373
TscAI	CASTG	4 cut(s)	505, 568, 1122, 1421
TseFI	GTSAC	1 cut(s)	139
TseI	GCWGC	2 cut(s)	920, 1403
Tsp45I	GTSAC	1 cut(s)	139
TspDTI	ATGAA	7 cut(s)	265, 352, 395, 1394, 1469, 1497, 1557
TspGWI	ACGGA	2 cut(s)	526, 1302
TspRI	CASTG	4 cut(s)	505, 568, 1122, 1421
Tth111I	GACNNNGTC	1 cut(s)	731
Vha464I	CTTAAG	1 cut(s)	992
VpaK11BI	GGWCC	4 cut(s)	179, 347, 1058, 1219
VspI	ATTAAT	1 cut(s)	975
XapI	RAATTY	1 cut(s)	1246
XceI	RCATGY	1 cut(s)	560
XcmI	CCANNNNNNNNNTGG	2 cut(s)	440, 1248
XhoI	CTCGAG	1 cut(s)	58
XmiI	GTMKAC	1 cut(s)	408
XmnI	GAANNNNTTC	1 cut(s)	272
XspI	CTAG	5 cut(s)	14, 962, 1400, 1464, 1554
Zsp2I	ATGCAT	1 cut(s)	218

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.