Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0001634

Physical Location & Seq

Genomic Coordinates Forward (+)

22928719 .. 22931060

Gene Structure 2342 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G224600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2334 bp

ATGGGCATTATTATGTTTACCTCTGTTATGCTTCTTTTCCTTCTGGGTCTCTGCCATTTATCCACGGCAGCGGCGGTGGACAAAAACGACGTTGCGAAGCCAAAAACGACTGCAAGCACTACTTACATCGTTCACATGGCTAAATCCGAAATGCCGGCGAGCTTCGAGCACCACACTCACTGGTACGACTCGTCGCTCAAAACAGTTTCCGACTCGGCCGAAATGATGTATATTTACAGCAATGCCATCCACGGCTTCTCCACCAAGCTCACCCCCGCACAAGCCGAGTCACTCCAATCCCAACCTGGAGTTCTCTCCGTGCTTCCCGAGTTGAAATACGAGCTCCACACGACTCGGACCCCGGAATTCCTCGGACTCGGCCAAACCACCGAGACGATCCCCCAGTCCAACTCGGAGAGCGACGTCATCATCGGAGTCTTAGACACCGGCGTCTGGCCCGAAAGCAAGAGCTTCGACGACACCGGACTCGGACCCGTACCCGGATCCTGGAAAGGCGCGTGCGAATCGGGTACCAACTTCAATTCTTCAAACTGCAATCGGAAACTAATCGGCGCCAGGTACTTCGCCAAAGGCTACGAGGCCACGCGGGGCCCGATCGAGACCTCCAAGGAATCGAAATCCCCACGCGACGACGATGGCCACGGCACCCACACCGCGTCAACCGCCGCAGGGTCGGTGGTCTCCGGCGCGAGCCTCTTCGGCTATGCCCTAGGAACCGCACGCGGGATGGCCCCTCGCGCCCGAATCGCCGCGTACAAGGTGTGCTGGGTCGGCGGCTGTTTCAGCTCCGACATCGTGGCGGCAATCGACCAGGCCATTGCGGACAACGTGAATGTTCTTTCGATGTCGCTCGGCGGCGGAATGTCGGACTATTTCCGCGACAGCGTGGCAATCGGAGCTTTCTCGGCCATGGAGAAGGGAATTTTAATCTCGTGCTCTGCCGGAAATGCGGGTCCTAGTGCCTACAGCTTGTCGAACTCGGCTCCATGGATCACGACAGTTGGAGCAGGCACACTGGATCGGGACTTCCCTGCTTTCGTCAGCCTGGGCAACGGTAAAAACTTCTCGGGCGTTTCGCTCTACCGCGGTAACTCCAACGCAGCCCCAACCGCCTTGACGCCGTTTGTTTACGCCGCTAACGCGAGCAACGCCACGTCAGGAAATCTATGCATGATGGGGACTTTAATTCCAGAACAAGTGAAGGGGAAAATAGTGATGTGTGACCGTGGAGTCAACGCAAGAGTCCAAAAAGGAGCGGTGGTCAAGGCTGCCGGAGGAGTGGGCATGGTATTGGCCAACACCGCCGCCAACGGCGAGGAGCTGGTGGCGGACGCTCATTTATTACCGGCCACGTCGGTGGGTCTGCAAAACGCCGACGTCATCAAGAGCTATTTGTTTAAGGATCCGAACCCGACCGCCACGATATTGTTCGAGGGGACTAAAGTTGGTGTCCAGCCTTCACCCGTAGTTGCGGCATTTAGTTCTCGGGGCCCGAATTCAGTTACTCCGGATGTACTGAAACCCGATATTGTTGCTCCAGGTGTCAACATCCTAGCTGGGTGGTCCGGGGCTATAGGCCCCACGGGACTGGCGATCGATGCGAGACGCGTGGCGTTCAATATTATCTCGGGTACGTCAATGTCTTGTCCGCACGTGAGCGGGCTAGCGGCTCTGCTGAAAGGGGCCCACCCGGAGTGGAGTCCGGCGGCGATTCGATCGGCGCTAATGACCACCGCGTATACAGCTTACAAGAACGGGCAGAAGTTGCAGGACGTGGCTACCGGAAAGCCGTCCACGCCGTTCGATCACGGCGCTGGACACGTAGACCCTATATCGGCCCTCAATCCGGGGCTGGTTTATGATCTAACGGTGGACGATTATCTAAACTTCCTCTGCGCGTTGAATTACTCGGCGACCGAGATTAACAGCTTGGCGAAGAGATCGTACACGTGCGACGAGAAAAAGAAGTACAGCGTGAGGGATCTAAATTACCCATCTTTTGCCGTGAACTTCGAGAGCAGATATGGAGGCGGGACGACGTCGTCTAACGTGGTGAGGTACACGAGGACGCTGACGAATGTGGGCCCCTCGGGAACTTACAAGGCGAGTGTGACGTCGGAAAGCCAGTTGGTGAAGATATCGGTGGAGCCCGAAACGCTGAGTTTTAGTCAGGCGAATGAGAAGAAAGGGTATACGGTGACGTTGAGTGCGGTGGGTTCGGTGCCGGCGAATGCAGAGAATAGCTTCGGGAGGGTGGAGTGGTCGGACGGGAAGCACATCGTAGGAAGCCCAATAGCAATAAGCTGGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0006508 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009505 GO:0009791 GO:0009845 GO:0009987 GO:0010154 GO:0010191 GO:0010214 GO:0016787 GO:0017171 GO:0019538 GO:0022414 GO:0030312 GO:0032501 GO:0032502 GO:0032504 GO:0043170 GO:0044237 GO:0044238 GO:0044464 GO:0048046 GO:0048316 GO:0048359 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0061458 GO:0070011 GO:0071704 GO:0071944 GO:0080001 GO:0090351 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

778

Amino Acids

81.46

Weight (kDa)

6.58

Isoelectric Point (pI)

28.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001634)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67360
fragaria_vesca	FvH4_1g17150 FvH4_2g33321 FvH4_2g33321 FvH4_2g33321 FvH4_2g33321 FvH4_2g33340
malus_domestica	MD08G1087900.v1.1 MD08G1088000.v1.1 MD15G1072700.v1.1 MD15G1292900.v1.1
prunus_persica	Prupe.1G425400_v2.0.a1 Prupe.1G425500_v2.0.a1 Prupe.1G425600_v2.0.a1 Prupe.1G425700_v2.0.a1 Prupe.6G224600_v2.0.a1
pyrus_communis	pycom08g07160 pycom15g06800 pycom15g25580
rosa_chinensis	RchiOBHm_Chr2g0107331 RchiOBHm_Chr6g0309241 RchiOBHm_Chr6g0309251
rosa_laevigata	RLG00000010577 RLG00000010578 RLG00000017570
rosa_multiflora	Rmu_co8090004.1_g000001 Rmu_co8331721.1_g000001 Rmu_sc0007504.1_g000002 Rmu_sc0015692.1_g000006
rosa_roxburghii	Rroxscaffold_2G00136430 Rroxscaffold_7G00159520 Rroxscaffold_7G00159530
rosa_rugosa	Rorug02G0142100 Rorug06G0370500 Rorug06G0370600
rosa_samantha	Rh2AG192800 Rh2BG204900 Rh2CG198000 Rh2DG200000 Rh6AG483900 Rh6AG484000 Rh6BG492900 Rh6BG493000 Rh6CG497800 Rh6CG497900 Rh6DG484400 Rh6DG484600
rosa_wichuraiana	Rw2G015270 Rw6G042130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	449, 1250, 2062
AatII	GACGTC	4 cut(s)	426, 1401, 2063, 2138
Acc65I	GGTACC	1 cut(s)	530
AccB1I	GGYRCC	4 cut(s)	530, 572, 665, 2242
AccBSI	CCGCTC	2 cut(s)	1277, 1680
AccI	GTMKAC	3 cut(s)	1760, 1845, 2213
AccIII	TCCGGA	1 cut(s)	1528
AclWI	GGATC	8 cut(s)	391, 498, 511, 1019, 1047, 1418, 1431, 2010
AcoI	YGGCCR	6 cut(s)	216, 379, 658, 927, 1314, 1368
AcsI	RAATTY	3 cut(s)	365, 942, 1516
AcvI	CACGTG	2 cut(s)	1675, 1971
AcyI	GRCGYC	7 cut(s)	423, 450, 573, 1139, 1398, 2060, 2135
AfiI	CCNNNNNNNGG	7 cut(s)	453, 500, 507, 690, 744, 1855, 1867
AflIII	ACRYGT	3 cut(s)	1627, 1840, 1968
AgsI	TTSAA	5 cut(s)	334, 541, 549, 1639, 1924
AjiI	CACGTC	3 cut(s)	1176, 1374, 1795
AjnI	CCWGG	6 cut(s)	304, 506, 575, 831, 1065, 1558
AjuI	GAANNNNNNNTTGG	2 cut(s)	294, 326
AleI	CACNNNNGTG	1 cut(s)	1376
Alw21I	GWGCWC	3 cut(s)	171, 345, 959
Alw26I	GTCTC	5 cut(s)	53, 386, 614, 706, 1618
AlwI	GGATC	8 cut(s)	391, 498, 511, 1019, 1047, 1418, 1431, 2010
Ama87I	CYCGRG	5 cut(s)	326, 1087, 1506, 1648, 2110
Aor13HI	TCCGGA	1 cut(s)	1528
ApaI	GGGCCC	4 cut(s)	614, 1514, 1708, 2108
ApeKI	GCWGC	3 cut(s)	68, 1121, 1289
ApoI	RAATTY	3 cut(s)	365, 942, 1516
Asp700I	GAANNNNTTC	1 cut(s)	2264
Asp718I	GGTACC	1 cut(s)	530
AspA2I	CCTAGG	1 cut(s)	730
AspLEI	GCGC	7 cut(s)	518, 575, 710, 761, 1744, 1835, 1919
AsuC2I	CCSGG	5 cut(s)	362, 501, 1588, 1712, 1869
AsuHPI	GGTGA	5 cut(s)	262, 1473, 2086, 2164, 2230
AsuNHI	GCTAGC	1 cut(s)	1684
AvaI	CYCGRG	5 cut(s)	326, 1087, 1506, 1648, 2110
AvaII	GGWCC	4 cut(s)	357, 491, 974, 1584
AvrII	CCTAGG	1 cut(s)	730
BaeGI	GKGCMC	4 cut(s)	614, 1514, 1708, 2108
BalI	TGGCCA	2 cut(s)	660, 1316
BamHI	GGATCC	2 cut(s)	503, 1423
BanI	GGYRCC	4 cut(s)	530, 572, 665, 2242
BanII	GRGCYC	6 cut(s)	345, 614, 1514, 1708, 2108, 2172
BarI	GAAGNNNNNNTAC	2 cut(s)	1949, 1981
BauI	CACGAG	2 cut(s)	952, 2083
BbrPI	CACGTG	2 cut(s)	1675, 1971
Bbv12I	GWGCWC	3 cut(s)	171, 345, 959
BbvI	GCAGC	3 cut(s)	80, 1133, 1276
BccI	CCATC	5 cut(s)	254, 650, 742, 1189, 2023
BceAI	ACGGC	9 cut(s)	81, 268, 679, 1126, 1348, 1795, 1804, 1846, 2009
BcgI	CGANNNNNNTGC	4 cut(s)	454, 488, 1535, 1569
BciT130I	CCWGG	6 cut(s)	306, 508, 577, 833, 1067, 1560
BcnI	CCSGG	5 cut(s)	362, 501, 1588, 1712, 1869
BcoDI	GTCTC	5 cut(s)	53, 386, 614, 706, 1618
BfaI	CTAG	4 cut(s)	731, 978, 1574, 1685
BfmI	CTRYAG	2 cut(s)	985, 1593
BfoI	RGCGCY	3 cut(s)	576, 1745, 1836
BglI	GCCNNNNNGGC	1 cut(s)	720
BlnI	CCTAGG	1 cut(s)	730
Bme18I	GGWCC	4 cut(s)	357, 491, 974, 1584
BmeT110I	CYCGRG	5 cut(s)	326, 1087, 1506, 1648, 2110
BmgBI	CACGTC	3 cut(s)	1176, 1374, 1795
BmrI	ACTGGG	1 cut(s)	397
BmsI	GCATC	1 cut(s)	1609
BmtI	GCTAGC	1 cut(s)	1688
BmuI	ACTGGG	1 cut(s)	397
BpmI	CTGGAG	2 cut(s)	327, 1542
BpuMI	CCSGG	5 cut(s)	362, 501, 1588, 1712, 1869
Bsa29I	ATCGAT	1 cut(s)	1617
BsaAI	YACGTR	3 cut(s)	1675, 1843, 1971
BsaHI	GRCGYC	7 cut(s)	423, 450, 573, 1139, 1398, 2060, 2135
BsaI	GGTCTC	3 cut(s)	53, 614, 706
BsaWI	WCCGGW	3 cut(s)	482, 1528, 1802
BsaXI	ACNNNNNCTCC	4 cut(s)	242, 272, 1266, 1296
Bsc4I	CCNNNNNNNGG	7 cut(s)	453, 500, 507, 690, 744, 1855, 1867
Bse118I	RCCGGY	4 cut(s)	154, 446, 1366, 2245
Bse1I	ACTGG	5 cut(s)	185, 403, 1041, 1614, 2146
Bse3DI	GCAATG	2 cut(s)	247, 837
BseAI	TCCGGA	1 cut(s)	1528
BseBI	CCWGG	6 cut(s)	306, 508, 577, 833, 1067, 1560
BseCI	ATCGAT	1 cut(s)	1617
BseGI	GGATG	4 cut(s)	246, 753, 1537, 1569
BseLI	CCNNNNNNNGG	7 cut(s)	453, 500, 507, 690, 744, 1855, 1867
BseMI	GCAATG	2 cut(s)	247, 837
BseMII	CTCAG	1 cut(s)	2171
BseNI	ACTGG	5 cut(s)	185, 403, 1041, 1614, 2146
BseRI	GAGGAG	2 cut(s)	1311, 1352
BseSI	GKGCMC	4 cut(s)	614, 1514, 1708, 2108
BseX3I	CGGCCG	1 cut(s)	216
BseXI	GCAGC	3 cut(s)	80, 1133, 1276
BseYI	CCCAGC	2 cut(s)	786, 1577
Bsh1285I	CGRYCG	6 cut(s)	219, 618, 1437, 1617, 1739, 1938
BshNI	GGYRCC	4 cut(s)	530, 572, 665, 2242
BshVI	ATCGAT	1 cut(s)	1617
BsiEI	CGRYCG	6 cut(s)	219, 618, 1437, 1617, 1739, 1938
BsiHKAI	GWGCWC	3 cut(s)	171, 345, 959
BsiHKCI	CYCGRG	5 cut(s)	326, 1087, 1506, 1648, 2110
BslFI	GGGAC	5 cut(s)	1058, 1213, 1471, 1620, 2068
BslI	CCNNNNNNNGG	7 cut(s)	453, 500, 507, 690, 744, 1855, 1867
BsmAI	GTCTC	5 cut(s)	53, 386, 614, 706, 1618
BsmBI	CGTCTC	2 cut(s)	386, 1618
BsmFI	GGGAC	5 cut(s)	1058, 1213, 1471, 1620, 2068
BsmI	GAATGC	1 cut(s)	2257
Bso31I	GGTCTC	3 cut(s)	53, 614, 706
BsoBI	CYCGRG	5 cut(s)	326, 1087, 1506, 1648, 2110
Bsp120I	GGGCCC	4 cut(s)	610, 1510, 1704, 2104
Bsp1286I	GDGCHC	8 cut(s)	171, 345, 614, 959, 1514, 1708, 2108, 2172
Bsp13I	TCCGGA	1 cut(s)	1528
Bsp19I	CCATGG	2 cut(s)	930, 1007
BspCNI	CTCAG	1 cut(s)	2172
BspDI	ATCGAT	1 cut(s)	1617
BspEI	TCCGGA	1 cut(s)	1528
BspOI	GCTAGC	1 cut(s)	1688
BspPI	GGATC	8 cut(s)	391, 498, 511, 1019, 1047, 1418, 1431, 2010
BspT107I	GGYRCC	4 cut(s)	530, 572, 665, 2242
BspTNI	GGTCTC	3 cut(s)	53, 614, 706
BsrBI	CCGCTC	2 cut(s)	1277, 1680
BsrDI	GCAATG	2 cut(s)	247, 837
BsrFI	RCCGGY	4 cut(s)	154, 446, 1366, 2245
BsrI	ACTGG	5 cut(s)	185, 403, 1041, 1614, 2146
BssAI	RCCGGY	4 cut(s)	154, 446, 1366, 2245
BssNAI	GTATAC	2 cut(s)	1761, 2214
BssNI	GRCGYC	7 cut(s)	423, 450, 573, 1139, 1398, 2060, 2135
BssSI	CACGAG	2 cut(s)	952, 2083
BssT1I	CCWWGG	4 cut(s)	627, 730, 930, 1007
Bst1107I	GTATAC	2 cut(s)	1761, 2214
Bst2BI	CACGAG	2 cut(s)	952, 2083
Bst2UI	CCWGG	6 cut(s)	306, 508, 577, 833, 1067, 1560
Bst4CI	ACNGT	6 cut(s)	205, 1021, 1076, 1247, 1891, 2218
Bst6I	CTCTTC	2 cut(s)	722, 1952
BstACI	GRCGYC	7 cut(s)	423, 450, 573, 1139, 1398, 2060, 2135
BstAPI	GCANNNNNTGC	1 cut(s)	1786
BstBAI	YACGTR	3 cut(s)	1675, 1843, 1971
BstDEI	CTNAG	2 cut(s)	439, 2180
BstDSI	CCRYGG	8 cut(s)	63, 250, 661, 930, 1007, 1105, 1246, 1602
BstF5I	GGATG	4 cut(s)	246, 753, 1537, 1569
BstH2I	RGCGCY	3 cut(s)	576, 1745, 1836
BstHHI	GCGC	7 cut(s)	518, 575, 710, 761, 1744, 1835, 1919
BstMAI	GTCTC	5 cut(s)	53, 386, 614, 706, 1618
BstMCI	CGRYCG	6 cut(s)	219, 618, 1437, 1617, 1739, 1938
BstNI	CCWGG	6 cut(s)	306, 508, 577, 833, 1067, 1560
BstSFI	CTRYAG	2 cut(s)	985, 1593
BstSLI	GKGCMC	4 cut(s)	614, 1514, 1708, 2108
BstV1I	GCAGC	3 cut(s)	80, 1133, 1276
BstX2I	RGATCY	3 cut(s)	503, 1423, 2002
BstXI	CCANNNNNNTGG	2 cut(s)	1378, 1609
BstYI	RGATCY	3 cut(s)	503, 1423, 2002
BstZ17I	GTATAC	2 cut(s)	1761, 2214
BstZI	CGGCCG	1 cut(s)	216
Bsu15I	ATCGAT	1 cut(s)	1617
BsuTUI	ATCGAT	1 cut(s)	1617
BtgI	CCRYGG	8 cut(s)	63, 250, 661, 930, 1007, 1105, 1246, 1602
BtrI	CACGTC	3 cut(s)	1176, 1374, 1795
BtsCI	GGATG	4 cut(s)	246, 753, 1537, 1569
BtsIMutI	CAGTG	2 cut(s)	178, 1034
CfoI	GCGC	7 cut(s)	518, 575, 710, 761, 1744, 1835, 1919
Cfr10I	RCCGGY	4 cut(s)	154, 446, 1366, 2245
Cfr42I	CCGCGG	1 cut(s)	1108
ClaI	ATCGAT	1 cut(s)	1617
CseI	GACGC	6 cut(s)	439, 666, 1147, 1361, 1635, 2098
CviAII	CATG	5 cut(s)	136, 931, 1008, 1192, 1306
DdeI	CTNAG	2 cut(s)	439, 2180
DinI	GGCGCC	1 cut(s)	574
DrdI	GACNNNNNNGTC	3 cut(s)	449, 1250, 2062
DseDI	GACNNNNNNGTC	3 cut(s)	449, 1250, 2062
EaeI	YGGCCR	6 cut(s)	216, 379, 658, 927, 1314, 1368
EagI	CGGCCG	1 cut(s)	216
Eam1104I	CTCTTC	2 cut(s)	722, 1952
EarI	CTCTTC	2 cut(s)	722, 1952
EciI	GGCGGA	2 cut(s)	894, 1364
Ecl136II	GAGCTC	1 cut(s)	343
EclXI	CGGCCG	1 cut(s)	216
Eco130I	CCWWGG	4 cut(s)	627, 730, 930, 1007
Eco24I	GRGCYC	6 cut(s)	345, 614, 1514, 1708, 2108, 2172
Eco31I	GGTCTC	3 cut(s)	53, 614, 706
Eco32I	GATATC	1 cut(s)	2160
Eco47I	GGWCC	4 cut(s)	357, 491, 974, 1584
Eco52I	CGGCCG	1 cut(s)	216
Eco53kI	GAGCTC	1 cut(s)	343
Eco72I	CACGTG	2 cut(s)	1675, 1971
Eco88I	CYCGRG	5 cut(s)	326, 1087, 1506, 1648, 2110
EcoICRI	GAGCTC	1 cut(s)	343
EcoO109I	RGGNCCY	6 cut(s)	610, 974, 1510, 1598, 1704, 2105
EcoRI	GAATTC	2 cut(s)	365, 1516
EcoRII	CCWGG	6 cut(s)	304, 506, 575, 831, 1065, 1558
EcoRV	GATATC	1 cut(s)	2160
EcoT14I	CCWWGG	4 cut(s)	627, 730, 930, 1007
EcoT22I	ATGCAT	1 cut(s)	1193
EcoT38I	GRGCYC	6 cut(s)	345, 614, 1514, 1708, 2108, 2172
EgeI	GGCGCC	1 cut(s)	574
EheI	GGCGCC	1 cut(s)	574
ErhI	CCWWGG	4 cut(s)	627, 730, 930, 1007
Esp3I	CGTCTC	2 cut(s)	386, 1618
FaeI	CATG	5 cut(s)	139, 934, 1011, 1195, 1309
FalI	AAGNNNNNCTT	2 cut(s)	106, 138
FaqI	GGGAC	5 cut(s)	1058, 1213, 1471, 1620, 2068
FatI	CATG	5 cut(s)	135, 930, 1007, 1191, 1305
FauI	CCCGC	6 cut(s)	283, 600, 737, 964, 1673, 2045
FblI	GTMKAC	3 cut(s)	1760, 1845, 2213
FokI	GGATG	4 cut(s)	233, 760, 1544, 1556
FriOI	GRGCYC	6 cut(s)	345, 614, 1514, 1708, 2108, 2172
FspBI	CTAG	4 cut(s)	731, 978, 1574, 1685
GlaI	GCGC	7 cut(s)	517, 574, 709, 760, 1743, 1834, 1918
GsaI	CCCAGC	2 cut(s)	790, 1581
GsuI	CTGGAG	2 cut(s)	327, 1542
HaeII	RGCGCY	3 cut(s)	576, 1745, 1836
HgaI	GACGC	6 cut(s)	439, 666, 1147, 1361, 1635, 2098
HhaI	GCGC	7 cut(s)	518, 575, 710, 761, 1744, 1835, 1919
Hin1I	GRCGYC	7 cut(s)	423, 450, 573, 1139, 1398, 2060, 2135
Hin1II	CATG	5 cut(s)	139, 934, 1011, 1195, 1309
Hin6I	GCGC	7 cut(s)	516, 573, 708, 759, 1742, 1833, 1917
HinP1I	GCGC	7 cut(s)	516, 573, 708, 759, 1742, 1833, 1917
HincII	GTYRAC	3 cut(s)	681, 1255, 1567
HindII	GTYRAC	3 cut(s)	681, 1255, 1567
HphI	GGTGA	5 cut(s)	262, 1473, 2086, 2164, 2230
HpyAV	CCTTC	4 cut(s)	50, 931, 1216, 1488
HpyCH4III	ACNGT	6 cut(s)	205, 1021, 1076, 1247, 1891, 2218
HpyCH4V	TGCA	6 cut(s)	113, 555, 1191, 1387, 1789, 2255
HpyF3I	CTNAG	2 cut(s)	439, 2180
Hsp92I	GRCGYC	7 cut(s)	423, 450, 573, 1139, 1398, 2060, 2135
Hsp92II	CATG	5 cut(s)	139, 934, 1011, 1195, 1309
HspAI	GCGC	7 cut(s)	516, 573, 708, 759, 1742, 1833, 1917
KasI	GGCGCC	1 cut(s)	572
Kpn2I	TCCGGA	1 cut(s)	1528
KpnI	GGTACC	1 cut(s)	534
KroI	GCCGGC	2 cut(s)	154, 2245
KroNI	GCCGGC	2 cut(s)	156, 2247
KspI	CCGCGG	1 cut(s)	1108
LmnI	GCTCC	9 cut(s)	348, 812, 917, 1009, 1025, 1274, 1339, 1561, 2167
Lsp1109I	GCAGC	3 cut(s)	80, 1133, 1276
LweI	GCATC	1 cut(s)	1609
MaeI	CTAG	4 cut(s)	731, 978, 1574, 1685
MaeIII	GTNAC	6 cut(s)	288, 1109, 1241, 1522, 2131, 2218
MbiI	CCGCTC	2 cut(s)	1277, 1680
MboII	GAAGA	5 cut(s)	537, 709, 1969, 2167, 2215
MflI	RGATCY	3 cut(s)	503, 1423, 2002
MhlI	GDGCHC	8 cut(s)	171, 345, 614, 959, 1514, 1708, 2108, 2172
MlsI	TGGCCA	2 cut(s)	660, 1316
MluCI	AATT	8 cut(s)	365, 541, 942, 1206, 1516, 1924, 2008, 2329
MluI	ACGCGT	1 cut(s)	1627
MluNI	TGGCCA	2 cut(s)	660, 1316
Mly113I	GGCGCC	1 cut(s)	573
MmeI	TCCRAC	8 cut(s)	234, 432, 834, 867, 1003, 1140, 2118, 2265
Mox20I	TGGCCA	2 cut(s)	660, 1316
Mph1103I	ATGCAT	1 cut(s)	1193
MroI	TCCGGA	1 cut(s)	1528
MroNI	GCCGGC	2 cut(s)	154, 2245
MroXI	GAANNNNTTC	1 cut(s)	2264
MscI	TGGCCA	2 cut(s)	660, 1316
MseI	TTAA	4 cut(s)	947, 1205, 1419, 1944
MslI	CAYNNNNRTG	2 cut(s)	11, 1376
Msp20I	TGGCCA	2 cut(s)	660, 1316
MspA1I	CMGCKG	2 cut(s)	71, 1107
Mva1269I	GAATGC	1 cut(s)	2257
MvaI	CCWGG	6 cut(s)	306, 508, 577, 833, 1067, 1560
NaeI	GCCGGC	2 cut(s)	156, 2247
NarI	GGCGCC	1 cut(s)	573
NciI	CCSGG	5 cut(s)	362, 501, 1588, 1712, 1869
NcoI	CCATGG	2 cut(s)	930, 1007
NgoMIV	GCCGGC	2 cut(s)	154, 2245
NheI	GCTAGC	1 cut(s)	1684
NlaIII	CATG	5 cut(s)	139, 934, 1011, 1195, 1309
NmeAIII	GCCGAG	7 cut(s)	194, 310, 357, 852, 905, 980, 1910
NmuCI	GTSAC	4 cut(s)	288, 1241, 2131, 2218
NsiI	ATGCAT	1 cut(s)	1193
OliI	CACNNNNGTG	1 cut(s)	1376
PcsI	WCGNNNNNNNCGW	3 cut(s)	611, 1610, 2246
PctI	GAATGC	1 cut(s)	2257
PdiI	GCCGGC	2 cut(s)	156, 2247
PdmI	GAANNNNTTC	1 cut(s)	2264
PfeI	GAWTC	4 cut(s)	524, 632, 765, 1732
PflFI	GACNNNGTC	2 cut(s)	2059, 2062
PfoI	TCCNGGA	1 cut(s)	506
Ple19I	CGATCG	3 cut(s)	618, 1617, 1739
PluTI	GGCGCC	1 cut(s)	576
PmaCI	CACGTG	2 cut(s)	1675, 1971
PmlI	CACGTG	2 cut(s)	1675, 1971
Ppu21I	YACGTR	3 cut(s)	1675, 1843, 1971
PpuMI	RGGWCCY	1 cut(s)	974
Psp124BI	GAGCTC	1 cut(s)	345
Psp5II	RGGWCCY	1 cut(s)	974
Psp6I	CCWGG	6 cut(s)	304, 506, 575, 831, 1065, 1558
PspCI	CACGTG	2 cut(s)	1675, 1971
PspFI	CCCAGC	2 cut(s)	786, 1577
PspGI	CCWGG	6 cut(s)	304, 506, 575, 831, 1065, 1558
PspOMI	GGGCCC	4 cut(s)	610, 1510, 1704, 2104
PspPPI	RGGWCCY	1 cut(s)	974
PsuI	RGATCY	3 cut(s)	503, 1423, 2002
PsyI	GACNNNGTC	2 cut(s)	2059, 2062
PvuI	CGATCG	3 cut(s)	618, 1617, 1739
RseI	CAYNNNNRTG	2 cut(s)	11, 1376
SacI	GAGCTC	1 cut(s)	345
SacII	CCGCGG	1 cut(s)	1108
SaqAI	TTAA	4 cut(s)	947, 1205, 1419, 1944
Sau96I	GGNCC	6 cut(s)	357, 456, 491, 610, 611, 751
SduI	GDGCHC	8 cut(s)	171, 345, 614, 959, 1514, 1708, 2108, 2172
SfaNI	GCATC	1 cut(s)	1609
SfcI	CTRYAG	2 cut(s)	985, 1593
SfoI	GGCGCC	1 cut(s)	574
Sfr303I	CCGCGG	1 cut(s)	1108
SgrAI	CRCCGGYG	1 cut(s)	446
SgrBI	CCGCGG	1 cut(s)	1108
SinI	GGWCC	4 cut(s)	357, 491, 974, 1584
SmiMI	CAYNNNNRTG	2 cut(s)	11, 1376
Sse9I	AATT	8 cut(s)	365, 541, 942, 1206, 1516, 1924, 2008, 2329
SspDI	GGCGCC	1 cut(s)	572
SspI	AATATT	1 cut(s)	1642
SspMI	CTAG	4 cut(s)	731, 978, 1574, 1685
SstI	GAGCTC	1 cut(s)	345
StyI	CCWWGG	4 cut(s)	627, 730, 930, 1007
TaaI	ACNGT	6 cut(s)	205, 1021, 1076, 1247, 1891, 2218
TaqII	GACCGA	1 cut(s)	1952
TasI	AATT	8 cut(s)	365, 541, 942, 1206, 1516, 1924, 2008, 2329
TatI	WGTACW	2 cut(s)	1534, 1989
TfiI	GAWTC	4 cut(s)	524, 632, 765, 1732
Tru1I	TTAA	4 cut(s)	947, 1205, 1419, 1944
Tru9I	TTAA	4 cut(s)	947, 1205, 1419, 1944
TscAI	CASTG	2 cut(s)	185, 1041
TseFI	GTSAC	4 cut(s)	288, 1241, 2131, 2218
TseI	GCWGC	3 cut(s)	68, 1121, 1289
Tsp45I	GTSAC	4 cut(s)	288, 1241, 2131, 2218
TspGWI	ACGGA	1 cut(s)	307
TspRI	CASTG	2 cut(s)	185, 1041
Tth111I	GACNNNGTC	2 cut(s)	2059, 2062
VpaK11BI	GGWCC	4 cut(s)	357, 491, 974, 1584
XapI	RAATTY	3 cut(s)	365, 942, 1516
XcmI	CCANNNNNNNNNTGG	1 cut(s)	302
XmaJI	CCTAGG	1 cut(s)	730
XmiI	GTMKAC	3 cut(s)	1760, 1845, 2213
XmnI	GAANNNNTTC	1 cut(s)	2264
XspI	CTAG	4 cut(s)	731, 978, 1574, 1685
ZraI	GACGTC	4 cut(s)	424, 1399, 2061, 2136
Zsp2I	ATGCAT	1 cut(s)	1193

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.