Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0001634

Physical Location & Seq

Genomic Coordinates Reverse (-)

19110650 .. 19113985

Gene Structure 3336 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG192800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2292 bp

ATGGCCATGTCTAGTTTCTTGATGGTTGTTTTGTTTCTGGGTCTGGGCCATTTCGCCGCGGCGGTGGTGGAGGCGGACGCTAGAAGCAGTCGGAGCACCTACATTGTTCACATGGCGAAATCCGAAATGCCGGCGAGTTTCGAGCACCACACTCACTGGTACGACGCGTCGCTCAAATCGGCCTCCGGCTCGGCCGAGATGCTCTACACCTACACCAACGCCATCCACGGCTTCTCCACGCAGCTGACGCCGGAGGAGGCCGAGACGCTCAAGTTCCAACCCGGGGTTCTGTTCGTTCTTCCCGAGTTGAAGTACGAGCTCCACACCACTCGGACCCCCGAGTTTCTCGGACTCGACCAGAGCAACCAGCTCTTCCCCAACTCGGTGTCGGCCAGTGACGTCATCGTCGGAGTGTTGGACACTGGAGTCTGGCCAGAGAGCAAGAGCTTTGATGACGCCGGACTCGGACCTGTTCCGGCGAGCTGGAAGGGCACGTGTGAAGTAGGCACGAGCTTCAACTCCTCGGCGTGTAATCGGAAGCTGATCGGTGCCAGGTACTTCGCCAAAGGCTACGAGGCCACATTAGGCCCCATCGACACTTCCAAGGAGTCCAGGTCCCCCAGAGACGACGACGGCCACGGAACCCACACCGCCACCACCGCGGCTGGGTCCGTCGTCACCGGAGCGAGCCTGTTCGGGTACGCGCCGGGATCCGCGCGTGGGATGGCCACGCACGCCAGGATCGCCGCCTACAAAGTGTGCTGGATCGGCGGGTGTTTCAGCTCCGACATCTTGATGGCCATAGACCAAGCCATCGACGACAACGTCAACGTTTTGTCCATATCGCTCGGCGGCGGAATGTCAGACTATTTCAGGGACAGCGTGGCGATGGGATCTTTCTCGGCGATGGAGAAGGGGATCTTGATCTCGTGCTCGGCCGGAAACGCGGGTCCTAGCGCGTACAGTTTGTCCAACTCGGCTCCGTGGATCACAACCGTAGGCGCGGGCACACTGGATCGCGACTTCCCGGCTTACCTCAGCCTCGGAAACGGTAAAAACATCTCAGGCGTTTCGCTTTACCGCGGTAATTCCGAGGCCACCGCTTTGGAAATGACGCCCTTTATTTACGCCGGTAACGCCAGTAACTCTACTTCCGGGAATCTCTGCATGATGGGAAGTTTGATACCTGAAAAAGTGAAGGGCAAAATAGTAATGTGCGACCGTGGAGTCAACTCCCGGGTCCAGAAAGGAACCGTGGTCAAAGCCGCCGGAGGAATCGGCATGGTCCTCTCCAACACCGCCGCAAACGGCGAGGAGCTGGTGGCCGACGCTCATTTGCTGCCGGCGACGGCGGTGGGCCAGAAAAACGGCGATGTCGTAAGGAGCTATCTGTTATCGGATCCGAATCCAACGGCCGCAATCCTGTTCGAGGGCACCAAGGTCGGAATCGAGCCTTCTCCGGTGGTCGCGGCGTTCAGTTCCCGAGGCCCGAACGCGATCACGCCGGACATTCTGAAACCCGACATCGTCGCGCCTGGTGTCAACATCTTAGCCGGGTGGTCCGGCGCCATCGGCCCCACCGGTCTGGCGGTCGACTCGCGGCGCGTGGCGTTCAACATCATCTCCGGCACGTCGATGTCCTGCCCGCACGTGAGCGGCCTCGCCGCGCTGCTCAAGGGGGCCCACCCGGAGTGGAGCCCCGCCGCGATCCGATCGGCGCTGATGACCACCGCCTACACGGCCTACAAGAATGGGCAGAAGTTGCAGGACGTGGCTACCGGAAAGCCATCCACGCCCTTCGATCACGGTGCTGGACACGTGGACCCCGTATCGGCCCTCAATCCGGGGCTGGTCTACGATCTAACGGTGGAGGATTATCTAAACTTTCTCTGTGCGTTGAACTACACCGAGTCCGAAATCACCGGCTTGGCTAAAAGAAAGTTTGCTTGCGACGAAAGCAAGAGTTACAGCGTTAGGGATCTGAACTACCCTTCTTTTGCTGTAAATTTGGTGAGCGGCTCGTCGTCTTCGTCCACTGTATTGAAGTACTCGAGGACTCTCACCAATGTGGGCCCGGCCGGAACGTACAAGGCGACTGCGACCATGGATGACCCGTCGGTGAAGATTTCGGTGGAGCCAGAGTCGTTGAGTTTCGCCGCGGAGAATGAGAAGAAGAGTTACACGGTGACGTTCGCGGTAACGGGGTCGAGATCATTGAGCAGCTTTGGGAGGCTCGAGTGGTCTGATGGGAAGCACATTGTTGGAAGTCCGATAGCAATCAGCCGGAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0006508 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009505 GO:0009791 GO:0009845 GO:0009987 GO:0010154 GO:0010191 GO:0010214 GO:0016787 GO:0017171 GO:0019538 GO:0022414 GO:0030312 GO:0032501 GO:0032502 GO:0032504 GO:0043170 GO:0044237 GO:0044238 GO:0044464 GO:0048046 GO:0048316 GO:0048359 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0061458 GO:0070011 GO:0071704 GO:0071944 GO:0080001 GO:0090351 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

763

Amino Acids

80.02

Weight (kDa)

5.92

Isoelectric Point (pI)

34.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	33 - 108	2.2e-19	Peptidase inhibitor I9
Peptidase_S8	PF00082	132 - 586	1.9e-47	Subtilase family
PA	PF02225	388 - 458	3.2e-12	PA domain
fn3_6	PF17766	660 - 760	6.7e-25	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001634)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67360
fragaria_vesca	FvH4_1g17150 FvH4_2g33321 FvH4_2g33321 FvH4_2g33321 FvH4_2g33321 FvH4_2g33340
malus_domestica	MD08G1087900.v1.1 MD08G1088000.v1.1 MD15G1072700.v1.1 MD15G1292900.v1.1
prunus_persica	Prupe.1G425400_v2.0.a1 Prupe.1G425500_v2.0.a1 Prupe.1G425600_v2.0.a1 Prupe.1G425700_v2.0.a1 Prupe.6G224600_v2.0.a1
pyrus_communis	pycom08g07160 pycom15g06800 pycom15g25580
rosa_chinensis	RchiOBHm_Chr2g0107331 RchiOBHm_Chr6g0309241 RchiOBHm_Chr6g0309251
rosa_laevigata	RLG00000010577 RLG00000010578 RLG00000017570
rosa_multiflora	Rmu_co8090004.1_g000001 Rmu_co8331721.1_g000001 Rmu_sc0007504.1_g000002 Rmu_sc0015692.1_g000006
rosa_roxburghii	Rroxscaffold_2G00136430 Rroxscaffold_7G00159520 Rroxscaffold_7G00159530
rosa_rugosa	Rorug02G0142100 Rorug06G0370500 Rorug06G0370600
rosa_samantha	Rh2AG192800 Rh2BG204900 Rh2CG198000 Rh2DG200000 Rh6AG483900 Rh6AG484000 Rh6BG492900 Rh6BG493000 Rh6CG497800 Rh6CG497900 Rh6DG484400 Rh6DG484600
rosa_wichuraiana	Rw2G015270 Rw6G042130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	4 cut(s)	404, 425, 824, 1226
AatII	GACGTC	1 cut(s)	402
AccB1I	GGYRCC	3 cut(s)	548, 1433, 1565
AccBSI	CCGCTC	2 cut(s)	1656, 2016
AccI	GTMKAC	2 cut(s)	1593, 1854
AclI	AACGTT	1 cut(s)	831
AcsI	RAATTY	1 cut(s)	2005
AcvI	CACGTG	3 cut(s)	495, 1651, 1819
AcyI	GRCGYC	5 cut(s)	248, 399, 456, 1115, 1566
AfaI	GTAC	7 cut(s)	161, 314, 557, 701, 962, 2048, 2087
AfiI	CCNNNNNNNGG	7 cut(s)	283, 382, 666, 720, 1429, 1831, 1843
AflIII	ACRYGT	3 cut(s)	165, 494, 1816
AgeI	ACCGGT	1 cut(s)	1580
AgsI	TTSAA	5 cut(s)	310, 517, 1615, 1900, 2044
AjiI	CACGTC	2 cut(s)	1632, 1771
AjnI	CCWGG	4 cut(s)	551, 611, 737, 1534
AjuI	GAANNNNNNNTTGG	2 cut(s)	270, 302
AleI	CACNNNNGTG	1 cut(s)	2066
Alw21I	GWGCWC	4 cut(s)	98, 147, 321, 935
Alw26I	GTCTC	2 cut(s)	257, 618
Ama87I	CYCGRG	7 cut(s)	281, 302, 338, 1236, 1482, 2050, 2234
ApaI	GGGCCC	2 cut(s)	1684, 2075
ApeKI	GCWGC	4 cut(s)	241, 1339, 1669, 2220
ApoI	RAATTY	1 cut(s)	2005
AsiGI	ACCGGT	1 cut(s)	1580
AspLEI	GCGC	9 cut(s)	706, 718, 959, 1004, 1534, 1568, 1605, 1669, 1720
AsuHPI	GGTGA	6 cut(s)	670, 1912, 2023, 2053, 2131, 2197
AvaI	CYCGRG	7 cut(s)	281, 302, 338, 1236, 1482, 2050, 2234
AvaII	GGWCC	9 cut(s)	333, 467, 615, 669, 950, 1240, 1285, 1560, 1822
BaeGI	GKGCMC	5 cut(s)	494, 1010, 1436, 1684, 2075
BalI	TGGCCA	4 cut(s)	5, 433, 728, 800
BamHI	GGATCC	2 cut(s)	710, 1399
BanI	GGYRCC	3 cut(s)	548, 1433, 1565
BanII	GRGCYC	4 cut(s)	321, 1684, 1700, 2075
BarI	GAAGNNNNNNTAC	4 cut(s)	1135, 1167, 2162, 2194
BauI	CACGAG	2 cut(s)	508, 928
BbrPI	CACGTG	3 cut(s)	495, 1651, 1819
BbsI	GAAGAC	1 cut(s)	2019
Bbv12I	GWGCWC	4 cut(s)	98, 147, 321, 935
BbvCI	CCTCAGC	1 cut(s)	1037
BbvI	GCAGC	4 cut(s)	253, 1326, 1656, 2232
BceAI	ACGGC	7 cut(s)	244, 649, 1324, 1365, 1384, 1428, 1755
BcgI	CGANNNNNNTGC	4 cut(s)	1423, 1457, 1790, 1824
BciT130I	CCWGG	4 cut(s)	553, 613, 739, 1536
BcoDI	GTCTC	2 cut(s)	257, 618
BfaI	CTAG	3 cut(s)	12, 81, 954
BfoI	RGCGCY	2 cut(s)	1569, 1721
BglI	GCCNNNNNGGC	1 cut(s)	1739
BmcAI	AGTACT	1 cut(s)	2048
Bme18I	GGWCC	9 cut(s)	333, 467, 615, 669, 950, 1240, 1285, 1560, 1822
BmeT110I	CYCGRG	7 cut(s)	281, 302, 338, 1236, 1482, 2050, 2234
BmgBI	CACGTC	2 cut(s)	1632, 1771
BmsI	GCATC	1 cut(s)	189
BpiI	GAAGAC	1 cut(s)	2019
BpmI	CTGGAG	1 cut(s)	444
Bpu10I	CCTNAGC	1 cut(s)	1037
BpuEI	CTTGAG	2 cut(s)	254, 1658
BsaAI	YACGTR	3 cut(s)	495, 1651, 1819
BsaBI	GATNNNNATC	3 cut(s)	923, 1404, 2276
BsaHI	GRCGYC	5 cut(s)	248, 399, 456, 1115, 1566
BsaWI	WCCGGW	4 cut(s)	680, 1459, 1580, 1778
BsaXI	ACNNNNNCTCC	8 cut(s)	218, 248, 599, 629, 1607, 1637, 2126, 2156
Bsc4I	CCNNNNNNNGG	7 cut(s)	283, 382, 666, 720, 1429, 1831, 1843
Bse118I	RCCGGY	5 cut(s)	130, 1130, 1342, 1580, 1922
Bse1I	ACTGG	5 cut(s)	161, 393, 427, 1017, 1140
Bse8I	GATNNNNATC	3 cut(s)	923, 1404, 2276
BseBI	CCWGG	4 cut(s)	553, 613, 739, 1536
BseGI	GGATG	4 cut(s)	222, 729, 1787, 2113
BseJI	GATNNNNATC	3 cut(s)	923, 1404, 2276
BseLI	CCNNNNNNNGG	7 cut(s)	283, 382, 666, 720, 1429, 1831, 1843
BseMII	CTCAG	2 cut(s)	1051, 1077
BseNI	ACTGG	5 cut(s)	161, 393, 427, 1017, 1140
BseRI	GAGGAG	3 cut(s)	269, 511, 1328
BseSI	GKGCMC	5 cut(s)	494, 1010, 1436, 1684, 2075
BseX3I	CGGCCG	4 cut(s)	192, 936, 1413, 2076
BseXI	GCAGC	4 cut(s)	253, 1326, 1656, 2232
BseYI	CCCAGC	1 cut(s)	665
Bsh1285I	CGRYCG	7 cut(s)	195, 939, 1222, 1416, 1593, 1715, 2079
BshNI	GGYRCC	3 cut(s)	548, 1433, 1565
BshTI	ACCGGT	1 cut(s)	1580
BsiEI	CGRYCG	7 cut(s)	195, 939, 1222, 1416, 1593, 1715, 2079
BsiHKAI	GWGCWC	4 cut(s)	98, 147, 321, 935
BsiHKCI	CYCGRG	7 cut(s)	281, 302, 338, 1236, 1482, 2050, 2234
BslFI	GGGAC	2 cut(s)	601, 890
BslI	CCNNNNNNNGG	7 cut(s)	283, 382, 666, 720, 1429, 1831, 1843
BsmAI	GTCTC	2 cut(s)	257, 618
BsmBI	CGTCTC	2 cut(s)	257, 618
BsmFI	GGGAC	2 cut(s)	601, 890
BsoBI	CYCGRG	7 cut(s)	281, 302, 338, 1236, 1482, 2050, 2234
Bsp120I	GGGCCC	2 cut(s)	1680, 2071
Bsp19I	CCATGG	1 cut(s)	2103
Bsp68I	TCGCGA	1 cut(s)	1020
BspCNI	CTCAG	2 cut(s)	1050, 1076
BspQI	GCTCTTC	1 cut(s)	377
BspT107I	GGYRCC	3 cut(s)	548, 1433, 1565
BsrBI	CCGCTC	2 cut(s)	1656, 2016
BsrFI	RCCGGY	5 cut(s)	130, 1130, 1342, 1580, 1922
BsrI	ACTGG	5 cut(s)	161, 393, 427, 1017, 1140
BssAI	RCCGGY	5 cut(s)	130, 1130, 1342, 1580, 1922
BssNI	GRCGYC	5 cut(s)	248, 399, 456, 1115, 1566
BssSI	CACGAG	2 cut(s)	508, 928
BssT1I	CCWWGG	3 cut(s)	603, 1437, 2103
Bst2BI	CACGAG	2 cut(s)	508, 928
Bst2UI	CCWGG	4 cut(s)	553, 613, 739, 1536
Bst4CI	ACNGT	9 cut(s)	965, 997, 1052, 1223, 1255, 1808, 1867, 2038, 2185
Bst6I	CTCTTC	2 cut(s)	377, 2168
BstACI	GRCGYC	5 cut(s)	248, 399, 456, 1115, 1566
BstAPI	GCANNNNNTGC	1 cut(s)	1762
BstBAI	YACGTR	3 cut(s)	495, 1651, 1819
BstC8I	GCNNGC	8 cut(s)	132, 481, 688, 735, 1006, 1344, 1646, 1948
BstDEI	CTNAG	3 cut(s)	1037, 1063, 1549
BstENI	CCTNNNNNAGG	1 cut(s)	1427
BstF5I	GGATG	4 cut(s)	222, 729, 1787, 2113
BstH2I	RGCGCY	2 cut(s)	1569, 1721
BstHHI	GCGC	9 cut(s)	706, 718, 959, 1004, 1534, 1568, 1605, 1669, 1720
BstMAI	GTCTC	2 cut(s)	257, 618
BstMCI	CGRYCG	7 cut(s)	195, 939, 1222, 1416, 1593, 1715, 2079
BstNI	CCWGG	4 cut(s)	553, 613, 739, 1536
BstSLI	GKGCMC	5 cut(s)	494, 1010, 1436, 1684, 2075
BstV1I	GCAGC	4 cut(s)	253, 1326, 1656, 2232
BstV2I	GAAGAC	1 cut(s)	2019
BstX2I	RGATCY	5 cut(s)	710, 893, 918, 1399, 1978
BstXI	CCANNNNNNTGG	2 cut(s)	1105, 1585
BstYI	RGATCY	5 cut(s)	710, 893, 918, 1399, 1978
BstZI	CGGCCG	4 cut(s)	192, 936, 1413, 2076
BtgZI	GCGATG	3 cut(s)	902, 920, 1386
BtrI	CACGTC	2 cut(s)	1632, 1771
BtsCI	GGATG	4 cut(s)	222, 729, 1787, 2113
BtsIMutI	CAGTG	5 cut(s)	154, 400, 420, 1010, 2034
BtuMI	TCGCGA	1 cut(s)	1020
Cac8I	GCNNGC	8 cut(s)	132, 481, 688, 735, 1006, 1344, 1646, 1948
CfoI	GCGC	9 cut(s)	706, 718, 959, 1004, 1534, 1568, 1605, 1669, 1720
Cfr10I	RCCGGY	5 cut(s)	130, 1130, 1342, 1580, 1922
Cfr42I	CCGCGG	4 cut(s)	60, 663, 1084, 2160
Cfr9I	CCCGGG	2 cut(s)	281, 1236
CseI	GACGC	8 cut(s)	86, 156, 173, 256, 274, 464, 1123, 1337
Csp6I	GTAC	7 cut(s)	160, 313, 556, 700, 961, 2047, 2086
CspAI	ACCGGT	1 cut(s)	1580
CviAII	CATG	5 cut(s)	7, 112, 1168, 1282, 2104
CviQI	GTAC	7 cut(s)	160, 313, 556, 700, 961, 2047, 2086
DdeI	CTNAG	3 cut(s)	1037, 1063, 1549
DinI	GGCGCC	1 cut(s)	1567
DrdI	GACNNNNNNGTC	4 cut(s)	404, 425, 824, 1226
DseDI	GACNNNNNNGTC	4 cut(s)	404, 425, 824, 1226
EagI	CGGCCG	4 cut(s)	192, 936, 1413, 2076
Eam1104I	CTCTTC	2 cut(s)	377, 2168
EarI	CTCTTC	2 cut(s)	377, 2168
EciI	GGCGGA	2 cut(s)	89, 870
Ecl136II	GAGCTC	1 cut(s)	319
EclXI	CGGCCG	4 cut(s)	192, 936, 1413, 2076
Eco130I	CCWWGG	3 cut(s)	603, 1437, 2103
Eco24I	GRGCYC	4 cut(s)	321, 1684, 1700, 2075
Eco47I	GGWCC	9 cut(s)	333, 467, 615, 669, 950, 1240, 1285, 1560, 1822
Eco52I	CGGCCG	4 cut(s)	192, 936, 1413, 2076
Eco53kI	GAGCTC	1 cut(s)	319
Eco72I	CACGTG	3 cut(s)	495, 1651, 1819
Eco88I	CYCGRG	7 cut(s)	281, 302, 338, 1236, 1482, 2050, 2234
EcoICRI	GAGCTC	1 cut(s)	319
EcoNI	CCTNNNNNAGG	1 cut(s)	1427
EcoO109I	RGGNCCY	4 cut(s)	587, 615, 950, 1680
EcoRII	CCWGG	4 cut(s)	551, 611, 737, 1534
EcoT14I	CCWWGG	3 cut(s)	603, 1437, 2103
EcoT38I	GRGCYC	4 cut(s)	321, 1684, 1700, 2075
EgeI	GGCGCC	1 cut(s)	1567
EheI	GGCGCC	1 cut(s)	1567
ErhI	CCWWGG	3 cut(s)	603, 1437, 2103
Esp3I	CGTCTC	2 cut(s)	257, 618
FaeI	CATG	5 cut(s)	10, 115, 1171, 1285, 2107
FaiI	YATR	7 cut(s)	8, 113, 803, 842, 1169, 1283, 2105
FalI	AAGNNNNNCTT	2 cut(s)	905, 937
FaqI	GGGAC	2 cut(s)	601, 890
FatI	CATG	5 cut(s)	6, 111, 1167, 1281, 2103
FauI	CCCGC	5 cut(s)	764, 940, 997, 1653, 1708
FblI	GTMKAC	2 cut(s)	1593, 1854
FokI	GGATG	4 cut(s)	209, 736, 1774, 2120
FriOI	GRGCYC	4 cut(s)	321, 1684, 1700, 2075
FspBI	CTAG	3 cut(s)	12, 81, 954
GlaI	GCGC	9 cut(s)	705, 717, 958, 1003, 1533, 1567, 1604, 1668, 1719
GsaI	CCCAGC	1 cut(s)	669
GsuI	CTGGAG	1 cut(s)	444
HaeII	RGCGCY	2 cut(s)	1569, 1721
HgaI	GACGC	8 cut(s)	86, 156, 173, 256, 274, 464, 1123, 1337
HhaI	GCGC	9 cut(s)	706, 718, 959, 1004, 1534, 1568, 1605, 1669, 1720
Hin1I	GRCGYC	5 cut(s)	248, 399, 456, 1115, 1566
Hin1II	CATG	5 cut(s)	10, 115, 1171, 1285, 2107
Hin6I	GCGC	9 cut(s)	704, 716, 957, 1002, 1532, 1566, 1603, 1667, 1718
HinP1I	GCGC	9 cut(s)	704, 716, 957, 1002, 1532, 1566, 1603, 1667, 1718
HincII	GTYRAC	4 cut(s)	829, 1231, 1543, 1594
HindII	GTYRAC	4 cut(s)	829, 1231, 1543, 1594
HphI	GGTGA	6 cut(s)	670, 1912, 2023, 2053, 2131, 2197
Hpy166II	GTNNAC	8 cut(s)	109, 829, 1231, 1543, 1594, 1822, 1855, 2034
Hpy188III	TCNNGA	8 cut(s)	19, 302, 793, 922, 1019, 1243, 1482, 2208
Hpy8I	GTNNAC	8 cut(s)	109, 829, 1231, 1543, 1594, 1822, 1855, 2034
HpyAV	CCTTC	6 cut(s)	481, 907, 1192, 1464, 1807, 2001
HpyCH4III	ACNGT	9 cut(s)	965, 997, 1052, 1223, 1255, 1808, 1867, 2038, 2185
HpyCH4V	TGCA	2 cut(s)	1167, 1765
HpyF3I	CTNAG	3 cut(s)	1037, 1063, 1549
Hsp92I	GRCGYC	5 cut(s)	248, 399, 456, 1115, 1566
Hsp92II	CATG	5 cut(s)	10, 115, 1171, 1285, 2107
HspAI	GCGC	9 cut(s)	704, 716, 957, 1002, 1532, 1566, 1603, 1667, 1718
KasI	GGCGCC	1 cut(s)	1565
KroI	GCCGGC	2 cut(s)	130, 1342
KroNI	GCCGGC	2 cut(s)	132, 1344
KspI	CCGCGG	4 cut(s)	60, 663, 1084, 2160
LguI	GCTCTTC	1 cut(s)	377
LmnI	GCTCC	9 cut(s)	93, 324, 683, 788, 985, 1315, 1383, 1695, 2134
Lsp1109I	GCAGC	4 cut(s)	253, 1326, 1656, 2232
LweI	GCATC	1 cut(s)	189
MaeI	CTAG	3 cut(s)	12, 81, 954
MaeIII	GTNAC	8 cut(s)	395, 676, 1133, 1142, 1964, 2177, 2185, 2197
MbiI	CCGCTC	2 cut(s)	1656, 2016
MboII	GAAGA	6 cut(s)	290, 364, 2019, 2134, 2182, 2185
MflI	RGATCY	5 cut(s)	710, 893, 918, 1399, 1978
MlsI	TGGCCA	4 cut(s)	5, 433, 728, 800
MluCI	AATT	2 cut(s)	1087, 2005
MluI	ACGCGT	1 cut(s)	165
MluNI	TGGCCA	4 cut(s)	5, 433, 728, 800
Mly113I	GGCGCC	1 cut(s)	1566
MlyI	GAGTC	9 cut(s)	345, 435, 456, 617, 1236, 1589, 1919, 2050, 2150
Mox20I	TGGCCA	4 cut(s)	5, 433, 728, 800
MroNI	GCCGGC	2 cut(s)	130, 1342
MscI	TGGCCA	4 cut(s)	5, 433, 728, 800
MslI	CAYNNNNRTG	3 cut(s)	794, 1634, 2066
Msp20I	TGGCCA	4 cut(s)	5, 433, 728, 800
MspA1I	CMGCKG	5 cut(s)	59, 244, 662, 1083, 2159
MvaI	CCWGG	4 cut(s)	553, 613, 739, 1536
NaeI	GCCGGC	2 cut(s)	132, 1344
NarI	GGCGCC	1 cut(s)	1566
NcoI	CCATGG	1 cut(s)	2103
NgoMIV	GCCGGC	2 cut(s)	130, 1342
NlaIII	CATG	5 cut(s)	10, 115, 1171, 1285, 2107
NmeAIII	GCCGAG	8 cut(s)	170, 220, 286, 503, 828, 881, 914, 956
NmuCI	GTSAC	3 cut(s)	395, 676, 2185
NruI	TCGCGA	1 cut(s)	1020
OliI	CACNNNNGTG	1 cut(s)	2066
PaeR7I	CTCGAG	2 cut(s)	2050, 2234
PciSI	GCTCTTC	1 cut(s)	377
PcsI	WCGNNNNNNNCGW	6 cut(s)	300, 822, 1374, 1824, 2027, 2090
PdiI	GCCGGC	2 cut(s)	132, 1344
PfeI	GAWTC	4 cut(s)	1159, 1275, 1405, 1446
PflFI	GACNNNGTC	2 cut(s)	824, 1526
PfoI	TCCNGGA	1 cut(s)	1154
PinAI	ACCGGT	1 cut(s)	1580
Ple19I	CGATCG	1 cut(s)	1715
PleI	GAGTC	9 cut(s)	345, 434, 456, 616, 1235, 1589, 1918, 2050, 2149
PluTI	GGCGCC	1 cut(s)	1569
PmaCI	CACGTG	3 cut(s)	495, 1651, 1819
PmlI	CACGTG	3 cut(s)	495, 1651, 1819
PpsI	GAGTC	9 cut(s)	345, 434, 456, 616, 1235, 1589, 1918, 2050, 2149
Ppu21I	YACGTR	3 cut(s)	495, 1651, 1819
PpuMI	RGGWCCY	2 cut(s)	615, 950
Psp124BI	GAGCTC	1 cut(s)	321
Psp1406I	AACGTT	1 cut(s)	831
Psp5II	RGGWCCY	2 cut(s)	615, 950
Psp6I	CCWGG	4 cut(s)	551, 611, 737, 1534
PspCI	CACGTG	3 cut(s)	495, 1651, 1819
PspFI	CCCAGC	1 cut(s)	665
PspGI	CCWGG	4 cut(s)	551, 611, 737, 1534
PspOMI	GGGCCC	2 cut(s)	1680, 2071
PspPPI	RGGWCCY	2 cut(s)	615, 950
PspXI	VCTCGAGB	2 cut(s)	2050, 2234
PsuI	RGATCY	5 cut(s)	710, 893, 918, 1399, 1978
PsyI	GACNNNGTC	2 cut(s)	824, 1526
PvuI	CGATCG	1 cut(s)	1715
PvuII	CAGCTG	1 cut(s)	244
RruI	TCGCGA	1 cut(s)	1020
RsaI	GTAC	7 cut(s)	161, 314, 557, 701, 962, 2048, 2087
RsaNI	GTAC	7 cut(s)	160, 313, 556, 700, 961, 2047, 2086
RseI	CAYNNNNRTG	3 cut(s)	794, 1634, 2066
SacI	GAGCTC	1 cut(s)	321
SacII	CCGCGG	4 cut(s)	60, 663, 1084, 2160
SalI	GTCGAC	1 cut(s)	1592
SapI	GCTCTTC	1 cut(s)	377
ScaI	AGTACT	1 cut(s)	2048
SchI	GAGTC	9 cut(s)	345, 435, 456, 617, 1236, 1589, 1919, 2050, 2150
SfaNI	GCATC	1 cut(s)	189
SfoI	GGCGCC	1 cut(s)	1567
Sfr274I	CTCGAG	2 cut(s)	2050, 2234
Sfr303I	CCGCGG	4 cut(s)	60, 663, 1084, 2160
SgrBI	CCGCGG	4 cut(s)	60, 663, 1084, 2160
SinI	GGWCC	9 cut(s)	333, 467, 615, 669, 950, 1240, 1285, 1560, 1822
SlaI	CTCGAG	2 cut(s)	2050, 2234
SmaI	CCCGGG	2 cut(s)	283, 1238
SmiMI	CAYNNNNRTG	3 cut(s)	794, 1634, 2066
SmlI	CTYRAG	4 cut(s)	269, 1673, 2050, 2234
SmoI	CTYRAG	4 cut(s)	269, 1673, 2050, 2234
Sse9I	AATT	2 cut(s)	1087, 2005
SspDI	GGCGCC	1 cut(s)	1565
SspMI	CTAG	3 cut(s)	12, 81, 954
SstI	GAGCTC	1 cut(s)	321
StyI	CCWWGG	3 cut(s)	603, 1437, 2103
TaaI	ACNGT	9 cut(s)	965, 997, 1052, 1223, 1255, 1808, 1867, 2038, 2185
TasI	AATT	2 cut(s)	1087, 2005
TatI	WGTACW	1 cut(s)	2046
TfiI	GAWTC	4 cut(s)	1159, 1275, 1405, 1446
TscAI	CASTG	5 cut(s)	161, 400, 427, 1017, 2041
TseFI	GTSAC	3 cut(s)	395, 676, 2185
TseI	GCWGC	4 cut(s)	241, 1339, 1669, 2220
Tsp45I	GTSAC	3 cut(s)	395, 676, 2185
TspGWI	ACGGA	3 cut(s)	654, 661, 972
TspMI	CCCGGG	2 cut(s)	281, 1236
TspRI	CASTG	5 cut(s)	161, 400, 427, 1017, 2041
Tth111I	GACNNNGTC	2 cut(s)	824, 1526
VpaK11BI	GGWCC	9 cut(s)	333, 467, 615, 669, 950, 1240, 1285, 1560, 1822
XagI	CCTNNNNNAGG	1 cut(s)	1427
XapI	RAATTY	1 cut(s)	2005
XhoI	CTCGAG	2 cut(s)	2050, 2234
XmaI	CCCGGG	2 cut(s)	281, 1236
XmiI	GTMKAC	2 cut(s)	1593, 1854
XspI	CTAG	3 cut(s)	12, 81, 954
ZraI	GACGTC	1 cut(s)	400
ZrmI	AGTACT	1 cut(s)	2048

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.