Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0001634

Physical Location & Seq

Genomic Coordinates Forward (+)

74127980 .. 74130277

Gene Structure 2298 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00136430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

ATGGCCATGTCTAGTTTCTGGATGGTTGTTTTATTTCTGGGTCTGGGTCTGGGCCATTTCGCCGCGGCGGAGGTGGAGGCGGACGCTAGAAGCAGTCGGAGCACCTACATTGTTCACATGGCGAAATCCGAAATGCCTGCGAGTTTCGAGCACCACACTCACTGGTACGACGCGTCGCTCAAATCGGCCTCCGACTCGGCCGAGATGCTCTACACCTACACCAACGCCATCCACGGCTTCTCCACGCAGCTGACGCCGGAGGAGGCGGAGATGCTCAAGTTCCAACCCGGGGTTCTGTTCGTTCTTCCCGAGTTGAAGTACGAGCTCCACACCACTCGGACTCCCGAGTTTCTCGGACTCGAACAGAACAACCAGCTCTTCCCCAACTCCGTGTCGGCCAGTGACGTCATCGTCGGAGTGTTGGACACTGGAGTCTGGCCAGAGAGCAAGAGCTTTGATGACACCGGACTCGGACCTGTTCCGGCGAGCTGGAAGGGCACCTGTGAAGTTGGCACCAGCTTCAATTCCTCGGCGTGTAATCGGAAGCTGATCGGTGCCAGGTACTTCGCCAAAGGCTACGAGGCCACATTAGGCCCCATCGACACTTCCAAGGAGTCCAGGTCCCCCAGAGACGACGACGGCCACGGAACCCACACCGCCTCCACCGCGGCGGGGTCCGTCGTCGCCGGAGCGAGCCTGTTTGGATACGCGCCTGGATCCGCGCGTGGGATGGCCACTCGCGCCAGGATCGCCGCCTACAAAGTGTGCTGGATCGGCGGGTGTTTCAGCTCCGACATCTTGATGGCCATAGACCAAGCCATCGACGACAACGTCAACGTTTTGTCCATGTCGCTCGGCGGCGGAATGTCCGACTATTTCAGGGACAGCGTGGCGATCGGATCTTTCTCGGCGATGGAGAAGGGGATCTTGATCTCGTGCTCGGCCGGAAACGCGGGTCCCAGCGCGTACAGTTTGTCCAACTCGGCTCCGTGGATCACAACCGTAGGCGCGGGCACACTGGATCGCGACTTCCCGGCTTACCTCAGCCTCGGTAACGGTAAAAACATCTCAGGCGTTTCGCTTTACCGCGGTAATTCCGAGGCCACCGCTTTGGAAATGACGCCCTTTATTTACGCCGGAAACGCGAGTAAGTCTACTTCCGGGAATCTCTGCATGATGGGAAGTTTGATACCGGAAAAAGTGAAGGGCAAAATAGTAATGTGCGATCGTGGGGTCAACTCCCGGGTCCAGAAAGGAACCGTGGTCAAAGCCGCCGGAGGAATCGGCATGGTCCTCTCCAACACAGCCGCAAACGGCGAGGAGCTGGTGGCCGACGCTCATATGCTGCCGGCGACGGCGGTGGGCCAGAAAAACGGCGATGTCGTAAGGAGCTATCTGTTTTCGGATCCGAATCCAACGGCCGCGATCCTGTTCGAGGGCACCAAGGTCGGAATCGAGCCTTCTCCGGTGGTCGCGGCGTTCAGTTCCCGAGGCCCGAACGCGATCACGCCGGACATTCTGAAACCCGACATCGTCGCGCCAGGTGTCAACATCTTAGCCGGGTGGTCCGGCGCCGTCGGCCCCACCGGTCTGGCGGTCGACTCGCGGCGCGTGGCGTTCAACATCATCTCCGGCACGTCGATGTCCTGCCCGCACGTGAGCGGCCTCGCCGCGCTGCTCAAGGGGGCCCACCCGGAGTGGAGCCCCGCCGCGATCCGATCGGCGCTGATGACCACCGCCTACACGGCCTACAAGAATGGGCAGAAGTTGCAGGACGTGGCTACCGGAAAGCCATCCACGCCCTTCGATCACGGTGCTGGACACGTGGACCCCGTATCGGCCCTCAATCCGGGGCTGGTCTACGATCTAACGGTGGAGGATTATCTAAACTTTCTCTGTGCGTTGAACTACACCGAGTCCGAAATCACCAGCTTGGCTAAAAGAAAGTTTTCTTGCGACGAAAGCAAGAGTTACAGCGTTAGGGATCTGAACTACCCTTCTTTTTCTGTAAATTTGGTGAGCGGCTCGTCGTCTTCGTCCACTGTATTGAAGTACTCGAGGACTCTCACCAATGTGGGCCCGGCCGGAACGTACAAGGCGACTGCGACCATGGATGACCCGTCGGTGAAGATTTCGGTGGAGCCAGAGTCGTTGAGTTTCGCCGCGGCGAATGAGAAGAAGAGTTACACGGTGACGTTCGCGGTAACGGGGTCGAGATCATTGAGCAGCTTTGGGAGGCTCGAGTGGTCTGATGGGAAGCACATTGTAGGAAGTCCGATAGCAATCAGCCGGAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0006508 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009505 GO:0009791 GO:0009845 GO:0009987 GO:0010154 GO:0010191 GO:0010214 GO:0016787 GO:0017171 GO:0019538 GO:0022414 GO:0030312 GO:0032501 GO:0032502 GO:0032504 GO:0043170 GO:0044237 GO:0044238 GO:0044464 GO:0048046 GO:0048316 GO:0048359 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0061458 GO:0070011 GO:0071704 GO:0071944 GO:0080001 GO:0090351 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

765

Amino Acids

80.48

Weight (kDa)

5.96

Isoelectric Point (pI)

35.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	35 - 110	4.6e-19	Peptidase inhibitor I9
Peptidase_S8	PF00082	134 - 588	3.5e-49	Subtilase family
PA	PF02225	390 - 460	2.9e-12	PA domain
fn3_6	PF17766	662 - 762	6.8e-25	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001634)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67360
fragaria_vesca	FvH4_1g17150 FvH4_2g33321 FvH4_2g33321 FvH4_2g33321 FvH4_2g33321 FvH4_2g33340
malus_domestica	MD08G1087900.v1.1 MD08G1088000.v1.1 MD15G1072700.v1.1 MD15G1292900.v1.1
prunus_persica	Prupe.1G425400_v2.0.a1 Prupe.1G425500_v2.0.a1 Prupe.1G425600_v2.0.a1 Prupe.1G425700_v2.0.a1 Prupe.6G224600_v2.0.a1
pyrus_communis	pycom08g07160 pycom15g06800 pycom15g25580
rosa_chinensis	RchiOBHm_Chr2g0107331 RchiOBHm_Chr6g0309241 RchiOBHm_Chr6g0309251
rosa_laevigata	RLG00000010577 RLG00000010578 RLG00000017570
rosa_multiflora	Rmu_co8090004.1_g000001 Rmu_co8331721.1_g000001 Rmu_sc0007504.1_g000002 Rmu_sc0015692.1_g000006
rosa_roxburghii	Rroxscaffold_2G00136430 Rroxscaffold_7G00159520 Rroxscaffold_7G00159530
rosa_rugosa	Rorug02G0142100 Rorug06G0370500 Rorug06G0370600
rosa_samantha	Rh2AG192800 Rh2BG204900 Rh2CG198000 Rh2DG200000 Rh6AG483900 Rh6AG484000 Rh6BG492900 Rh6BG493000 Rh6CG497800 Rh6CG497900 Rh6DG484400 Rh6DG484600
rosa_wichuraiana	Rw2G015270 Rw6G042130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	410, 431, 830
AatII	GACGTC	1 cut(s)	408
AccB1I	GGYRCC	5 cut(s)	497, 512, 554, 1439, 1571
AccBSI	CCGCTC	2 cut(s)	1662, 2022
AccI	GTMKAC	3 cut(s)	1154, 1599, 1860
AclI	AACGTT	1 cut(s)	837
AcsI	RAATTY	1 cut(s)	2011
AcvI	CACGTG	2 cut(s)	1657, 1825
AcyI	GRCGYC	4 cut(s)	254, 405, 1121, 1572
AfaI	GTAC	6 cut(s)	167, 320, 563, 968, 2054, 2093
AfiI	CCNNNNNNNGG	6 cut(s)	289, 672, 726, 1435, 1837, 1849
AflIII	ACRYGT	2 cut(s)	171, 1822
AgeI	ACCGGT	1 cut(s)	1586
AgsI	TTSAA	5 cut(s)	316, 523, 1621, 1906, 2050
AjiI	CACGTC	2 cut(s)	1638, 1777
AjnI	CCWGG	5 cut(s)	557, 617, 712, 743, 1540
AjuI	GAANNNNNNNTTGG	2 cut(s)	276, 308
AleI	CACNNNNGTG	1 cut(s)	2072
Alw21I	GWGCWC	4 cut(s)	104, 153, 327, 941
Alw26I	GTCTC	1 cut(s)	624
Ama87I	CYCGRG	7 cut(s)	287, 308, 344, 1242, 1488, 2056, 2240
ApaI	GGGCCC	2 cut(s)	1690, 2081
ApeKI	GCWGC	4 cut(s)	247, 1345, 1675, 2226
ApoI	RAATTY	1 cut(s)	2011
AsiGI	ACCGGT	1 cut(s)	1586
Asp700I	GAANNNNTTC	1 cut(s)	1948
AsuHPI	GGTGA	5 cut(s)	1918, 2029, 2059, 2137, 2203
AvaI	CYCGRG	7 cut(s)	287, 308, 344, 1242, 1488, 2056, 2240
AvaII	GGWCC	8 cut(s)	473, 621, 675, 956, 1246, 1291, 1566, 1828
BaeGI	GKGCMC	5 cut(s)	500, 1016, 1442, 1690, 2081
BalI	TGGCCA	4 cut(s)	5, 439, 734, 806
BamHI	GGATCC	2 cut(s)	716, 1405
BanI	GGYRCC	5 cut(s)	497, 512, 554, 1439, 1571
BanII	GRGCYC	4 cut(s)	327, 1690, 1706, 2081
BarI	GAAGNNNNNNTAC	4 cut(s)	1141, 1173, 2168, 2200
BauI	CACGAG	1 cut(s)	934
BbrPI	CACGTG	2 cut(s)	1657, 1825
BbsI	GAAGAC	1 cut(s)	2025
Bbv12I	GWGCWC	4 cut(s)	104, 153, 327, 941
BbvCI	CCTCAGC	1 cut(s)	1043
BbvI	GCAGC	4 cut(s)	259, 1332, 1662, 2238
BceAI	ACGGC	8 cut(s)	250, 655, 1330, 1371, 1390, 1434, 1559, 1761
BcgI	CGANNNNNNTGC	6 cut(s)	119, 153, 1429, 1463, 1796, 1830
BciT130I	CCWGG	5 cut(s)	559, 619, 714, 745, 1542
BciVI	GTATCC	1 cut(s)	698
BcoDI	GTCTC	1 cut(s)	624
BfaI	CTAG	2 cut(s)	12, 87
BfoI	RGCGCY	2 cut(s)	1575, 1727
BfuI	GTATCC	1 cut(s)	698
BglI	GCCNNNNNGGC	1 cut(s)	1745
BmcAI	AGTACT	1 cut(s)	2054
Bme18I	GGWCC	8 cut(s)	473, 621, 675, 956, 1246, 1291, 1566, 1828
BmeT110I	CYCGRG	7 cut(s)	287, 308, 344, 1242, 1488, 2056, 2240
BmgBI	CACGTC	2 cut(s)	1638, 1777
BmsI	GCATC	2 cut(s)	195, 261
BpiI	GAAGAC	1 cut(s)	2025
BpmI	CTGGAG	1 cut(s)	450
Bpu10I	CCTNAGC	1 cut(s)	1043
BpuEI	CTTGAG	2 cut(s)	260, 1664
BsaAI	YACGTR	2 cut(s)	1657, 1825
BsaBI	GATNNNNATC	3 cut(s)	929, 1410, 2282
BsaHI	GRCGYC	4 cut(s)	254, 405, 1121, 1572
BsaWI	WCCGGW	5 cut(s)	464, 1192, 1465, 1586, 1784
Bsc4I	CCNNNNNNNGG	6 cut(s)	289, 672, 726, 1435, 1837, 1849
Bse118I	RCCGGY	2 cut(s)	1348, 1586
Bse1I	ACTGG	4 cut(s)	167, 399, 433, 1023
Bse8I	GATNNNNATC	3 cut(s)	929, 1410, 2282
BseBI	CCWGG	5 cut(s)	559, 619, 714, 745, 1542
BseGI	GGATG	5 cut(s)	27, 228, 735, 1793, 2119
BseJI	GATNNNNATC	3 cut(s)	929, 1410, 2282
BseLI	CCNNNNNNNGG	6 cut(s)	289, 672, 726, 1435, 1837, 1849
BseMII	CTCAG	2 cut(s)	1057, 1083
BseNI	ACTGG	4 cut(s)	167, 399, 433, 1023
BseRI	GAGGAG	2 cut(s)	275, 1334
BseSI	GKGCMC	5 cut(s)	500, 1016, 1442, 1690, 2081
BseX3I	CGGCCG	4 cut(s)	198, 942, 1419, 2082
BseXI	GCAGC	4 cut(s)	259, 1332, 1662, 2238
BseYI	CCCAGC	1 cut(s)	959
Bsh1285I	CGRYCG	8 cut(s)	201, 897, 945, 1228, 1422, 1599, 1721, 2085
BshNI	GGYRCC	5 cut(s)	497, 512, 554, 1439, 1571
BshTI	ACCGGT	1 cut(s)	1586
BsiEI	CGRYCG	8 cut(s)	201, 897, 945, 1228, 1422, 1599, 1721, 2085
BsiHKAI	GWGCWC	4 cut(s)	104, 153, 327, 941
BsiHKCI	CYCGRG	7 cut(s)	287, 308, 344, 1242, 1488, 2056, 2240
BslFI	GGGAC	3 cut(s)	607, 896, 942
BslI	CCNNNNNNNGG	6 cut(s)	289, 672, 726, 1435, 1837, 1849
BsmAI	GTCTC	1 cut(s)	624
BsmBI	CGTCTC	1 cut(s)	624
BsmFI	GGGAC	3 cut(s)	607, 896, 942
BsoBI	CYCGRG	7 cut(s)	287, 308, 344, 1242, 1488, 2056, 2240
Bsp120I	GGGCCC	2 cut(s)	1686, 2077
Bsp19I	CCATGG	1 cut(s)	2109
Bsp68I	TCGCGA	1 cut(s)	1026
BspCNI	CTCAG	2 cut(s)	1056, 1082
BspQI	GCTCTTC	1 cut(s)	383
BspT107I	GGYRCC	5 cut(s)	497, 512, 554, 1439, 1571
BsrBI	CCGCTC	2 cut(s)	1662, 2022
BsrFI	RCCGGY	2 cut(s)	1348, 1586
BsrI	ACTGG	4 cut(s)	167, 399, 433, 1023
BssAI	RCCGGY	2 cut(s)	1348, 1586
BssNI	GRCGYC	4 cut(s)	254, 405, 1121, 1572
BssSI	CACGAG	1 cut(s)	934
BssT1I	CCWWGG	3 cut(s)	609, 1443, 2109
Bst2BI	CACGAG	1 cut(s)	934
Bst2UI	CCWGG	5 cut(s)	559, 619, 714, 745, 1542
Bst4CI	ACNGT	8 cut(s)	971, 1003, 1058, 1261, 1814, 1873, 2044, 2191
Bst6I	CTCTTC	2 cut(s)	383, 2174
BstACI	GRCGYC	4 cut(s)	254, 405, 1121, 1572
BstAPI	GCANNNNNTGC	1 cut(s)	1768
BstBAI	YACGTR	2 cut(s)	1657, 1825
BstC8I	GCNNGC	6 cut(s)	138, 487, 694, 1012, 1350, 1652
BstDEI	CTNAG	3 cut(s)	1043, 1069, 1555
BstDSI	CCRYGG	9 cut(s)	63, 232, 643, 666, 989, 1087, 1260, 2109, 2163
BstENI	CCTNNNNNAGG	1 cut(s)	1433
BstF5I	GGATG	5 cut(s)	27, 228, 735, 1793, 2119
BstH2I	RGCGCY	2 cut(s)	1575, 1727
BstMAI	GTCTC	1 cut(s)	624
BstMCI	CGRYCG	8 cut(s)	201, 897, 945, 1228, 1422, 1599, 1721, 2085
BstNI	CCWGG	5 cut(s)	559, 619, 714, 745, 1542
BstSLI	GKGCMC	5 cut(s)	500, 1016, 1442, 1690, 2081
BstV1I	GCAGC	4 cut(s)	259, 1332, 1662, 2238
BstV2I	GAAGAC	1 cut(s)	2025
BstX2I	RGATCY	5 cut(s)	716, 899, 924, 1405, 1984
BstXI	CCANNNNNNTGG	2 cut(s)	1111, 1591
BstYI	RGATCY	5 cut(s)	716, 899, 924, 1405, 1984
BstZI	CGGCCG	4 cut(s)	198, 942, 1419, 2082
BsuI	GTATCC	1 cut(s)	698
BtgI	CCRYGG	9 cut(s)	63, 232, 643, 666, 989, 1087, 1260, 2109, 2163
BtgZI	GCGATG	2 cut(s)	926, 1392
BtrI	CACGTC	2 cut(s)	1638, 1777
BtsCI	GGATG	5 cut(s)	27, 228, 735, 1793, 2119
BtsIMutI	CAGTG	5 cut(s)	160, 406, 426, 1016, 2040
BtuMI	TCGCGA	1 cut(s)	1026
Cac8I	GCNNGC	6 cut(s)	138, 487, 694, 1012, 1350, 1652
Cfr10I	RCCGGY	2 cut(s)	1348, 1586
Cfr42I	CCGCGG	4 cut(s)	66, 669, 1090, 2166
Cfr9I	CCCGGG	2 cut(s)	287, 1242
CseI	GACGC	6 cut(s)	92, 162, 179, 262, 1129, 1343
Csp6I	GTAC	6 cut(s)	166, 319, 562, 967, 2053, 2092
CspAI	ACCGGT	1 cut(s)	1586
CviAII	CATG	6 cut(s)	7, 118, 847, 1174, 1288, 2110
CviQI	GTAC	6 cut(s)	166, 319, 562, 967, 2053, 2092
DdeI	CTNAG	3 cut(s)	1043, 1069, 1555
DinI	GGCGCC	1 cut(s)	1573
DrdI	GACNNNNNNGTC	3 cut(s)	410, 431, 830
DseDI	GACNNNNNNGTC	3 cut(s)	410, 431, 830
EagI	CGGCCG	4 cut(s)	198, 942, 1419, 2082
Eam1104I	CTCTTC	2 cut(s)	383, 2174
EarI	CTCTTC	2 cut(s)	383, 2174
EciI	GGCGGA	4 cut(s)	83, 95, 281, 876
Ecl136II	GAGCTC	1 cut(s)	325
EclXI	CGGCCG	4 cut(s)	198, 942, 1419, 2082
Eco130I	CCWWGG	3 cut(s)	609, 1443, 2109
Eco24I	GRGCYC	4 cut(s)	327, 1690, 1706, 2081
Eco47I	GGWCC	8 cut(s)	473, 621, 675, 956, 1246, 1291, 1566, 1828
Eco52I	CGGCCG	4 cut(s)	198, 942, 1419, 2082
Eco53kI	GAGCTC	1 cut(s)	325
Eco72I	CACGTG	2 cut(s)	1657, 1825
Eco88I	CYCGRG	7 cut(s)	287, 308, 344, 1242, 1488, 2056, 2240
EcoICRI	GAGCTC	1 cut(s)	325
EcoNI	CCTNNNNNAGG	1 cut(s)	1433
EcoO109I	RGGNCCY	4 cut(s)	593, 621, 956, 1686
EcoRII	CCWGG	5 cut(s)	557, 617, 712, 743, 1540
EcoT14I	CCWWGG	3 cut(s)	609, 1443, 2109
EcoT38I	GRGCYC	4 cut(s)	327, 1690, 1706, 2081
EgeI	GGCGCC	1 cut(s)	1573
EheI	GGCGCC	1 cut(s)	1573
ErhI	CCWWGG	3 cut(s)	609, 1443, 2109
Esp3I	CGTCTC	1 cut(s)	624
FaeI	CATG	6 cut(s)	10, 121, 850, 1177, 1291, 2113
FaiI	YATR	9 cut(s)	8, 119, 809, 848, 1175, 1289, 1341, 1343, 2111
FalI	AAGNNNNNCTT	2 cut(s)	911, 943
FaqI	GGGAC	3 cut(s)	607, 896, 942
FatI	CATG	6 cut(s)	6, 117, 846, 1173, 1287, 2109
FauI	CCCGC	6 cut(s)	664, 770, 946, 1003, 1659, 1714
FauNDI	CATATG	1 cut(s)	1341
FblI	GTMKAC	3 cut(s)	1154, 1599, 1860
FokI	GGATG	5 cut(s)	34, 215, 742, 1780, 2126
FriOI	GRGCYC	4 cut(s)	327, 1690, 1706, 2081
FspBI	CTAG	2 cut(s)	12, 87
GsaI	CCCAGC	1 cut(s)	963
GsuI	CTGGAG	1 cut(s)	450
HaeII	RGCGCY	2 cut(s)	1575, 1727
HgaI	GACGC	6 cut(s)	92, 162, 179, 262, 1129, 1343
Hin1I	GRCGYC	4 cut(s)	254, 405, 1121, 1572
Hin1II	CATG	6 cut(s)	10, 121, 850, 1177, 1291, 2113
HincII	GTYRAC	4 cut(s)	835, 1237, 1549, 1600
HindII	GTYRAC	4 cut(s)	835, 1237, 1549, 1600
HphI	GGTGA	5 cut(s)	1918, 2029, 2059, 2137, 2203
Hpy166II	GTNNAC	9 cut(s)	115, 835, 1155, 1237, 1549, 1600, 1828, 1861, 2040
Hpy188III	TCNNGA	9 cut(s)	19, 308, 344, 799, 928, 1025, 1249, 1488, 2214
Hpy8I	GTNNAC	9 cut(s)	115, 835, 1155, 1237, 1549, 1600, 1828, 1861, 2040
HpyAV	CCTTC	6 cut(s)	487, 913, 1198, 1470, 1813, 2007
HpyCH4III	ACNGT	8 cut(s)	971, 1003, 1058, 1261, 1814, 1873, 2044, 2191
HpyCH4IV	ACGT	9 cut(s)	405, 831, 837, 1637, 1656, 1776, 1824, 2090, 2195
HpyCH4V	TGCA	2 cut(s)	1173, 1771
HpyF3I	CTNAG	3 cut(s)	1043, 1069, 1555
HpySE526I	ACGT	9 cut(s)	405, 831, 837, 1637, 1656, 1776, 1824, 2090, 2195
Hsp92I	GRCGYC	4 cut(s)	254, 405, 1121, 1572
Hsp92II	CATG	6 cut(s)	10, 121, 850, 1177, 1291, 2113
KasI	GGCGCC	1 cut(s)	1571
KflI	GGGWCCC	1 cut(s)	956
KroI	GCCGGC	1 cut(s)	1348
KroNI	GCCGGC	1 cut(s)	1350
KspI	CCGCGG	4 cut(s)	66, 669, 1090, 2166
LguI	GCTCTTC	1 cut(s)	383
LmnI	GCTCC	9 cut(s)	99, 330, 689, 794, 991, 1321, 1389, 1701, 2140
Lsp1109I	GCAGC	4 cut(s)	259, 1332, 1662, 2238
LweI	GCATC	2 cut(s)	195, 261
MaeI	CTAG	2 cut(s)	12, 87
MaeII	ACGT	9 cut(s)	405, 831, 837, 1637, 1656, 1776, 1824, 2090, 2195
MaeIII	GTNAC	6 cut(s)	401, 1052, 1970, 2183, 2191, 2203
MbiI	CCGCTC	2 cut(s)	1662, 2022
MboII	GAAGA	6 cut(s)	296, 370, 2025, 2140, 2188, 2191
MflI	RGATCY	5 cut(s)	716, 899, 924, 1405, 1984
MlsI	TGGCCA	4 cut(s)	5, 439, 734, 806
MluCI	AATT	3 cut(s)	523, 1093, 2011
MluI	ACGCGT	1 cut(s)	171
MluNI	TGGCCA	4 cut(s)	5, 439, 734, 806
Mly113I	GGCGCC	1 cut(s)	1572
Mox20I	TGGCCA	4 cut(s)	5, 439, 734, 806
MroNI	GCCGGC	1 cut(s)	1348
MroXI	GAANNNNTTC	1 cut(s)	1948
MscI	TGGCCA	4 cut(s)	5, 439, 734, 806
MslI	CAYNNNNRTG	3 cut(s)	800, 1640, 2072
Msp20I	TGGCCA	4 cut(s)	5, 439, 734, 806
MspA1I	CMGCKG	5 cut(s)	65, 250, 668, 1089, 2165
MvaI	CCWGG	5 cut(s)	559, 619, 714, 745, 1542
NaeI	GCCGGC	1 cut(s)	1350
NarI	GGCGCC	1 cut(s)	1572
NcoI	CCATGG	1 cut(s)	2109
NdeI	CATATG	1 cut(s)	1341
NgoMIV	GCCGGC	1 cut(s)	1348
NlaIII	CATG	6 cut(s)	10, 121, 850, 1177, 1291, 2113
NmeAIII	GCCGAG	7 cut(s)	176, 226, 509, 834, 887, 920, 962
NmuCI	GTSAC	2 cut(s)	401, 2191
NruI	TCGCGA	1 cut(s)	1026
OliI	CACNNNNGTG	1 cut(s)	2072
PaeR7I	CTCGAG	2 cut(s)	2056, 2240
PciSI	GCTCTTC	1 cut(s)	383
PcsI	WCGNNNNNNNCGW	6 cut(s)	306, 828, 1380, 1830, 2033, 2096
PdiI	GCCGGC	1 cut(s)	1350
PdmI	GAANNNNTTC	1 cut(s)	1948
PfeI	GAWTC	4 cut(s)	1165, 1281, 1411, 1452
PflFI	GACNNNGTC	2 cut(s)	830, 1532
PfoI	TCCNGGA	1 cut(s)	1160
PinAI	ACCGGT	1 cut(s)	1586
Ple19I	CGATCG	3 cut(s)	897, 1228, 1721
PluTI	GGCGCC	1 cut(s)	1575
PmaCI	CACGTG	2 cut(s)	1657, 1825
PmlI	CACGTG	2 cut(s)	1657, 1825
Ppu21I	YACGTR	2 cut(s)	1657, 1825
PpuMI	RGGWCCY	2 cut(s)	621, 956
Psp124BI	GAGCTC	1 cut(s)	327
Psp1406I	AACGTT	1 cut(s)	837
Psp5II	RGGWCCY	2 cut(s)	621, 956
Psp6I	CCWGG	5 cut(s)	557, 617, 712, 743, 1540
PspCI	CACGTG	2 cut(s)	1657, 1825
PspFI	CCCAGC	1 cut(s)	959
PspGI	CCWGG	5 cut(s)	557, 617, 712, 743, 1540
PspOMI	GGGCCC	2 cut(s)	1686, 2077
PspPPI	RGGWCCY	2 cut(s)	621, 956
PspXI	VCTCGAGB	2 cut(s)	2056, 2240
PsuI	RGATCY	5 cut(s)	716, 899, 924, 1405, 1984
PsyI	GACNNNGTC	2 cut(s)	830, 1532
PvuI	CGATCG	3 cut(s)	897, 1228, 1721
PvuII	CAGCTG	1 cut(s)	250
RruI	TCGCGA	1 cut(s)	1026
RsaI	GTAC	6 cut(s)	167, 320, 563, 968, 2054, 2093
RsaNI	GTAC	6 cut(s)	166, 319, 562, 967, 2053, 2092
RseI	CAYNNNNRTG	3 cut(s)	800, 1640, 2072
SacI	GAGCTC	1 cut(s)	327
SacII	CCGCGG	4 cut(s)	66, 669, 1090, 2166
SalI	GTCGAC	1 cut(s)	1598
SapI	GCTCTTC	1 cut(s)	383
ScaI	AGTACT	1 cut(s)	2054
SfaNI	GCATC	2 cut(s)	195, 261
SfoI	GGCGCC	1 cut(s)	1573
Sfr274I	CTCGAG	2 cut(s)	2056, 2240
Sfr303I	CCGCGG	4 cut(s)	66, 669, 1090, 2166
SgrBI	CCGCGG	4 cut(s)	66, 669, 1090, 2166
SinI	GGWCC	8 cut(s)	473, 621, 675, 956, 1246, 1291, 1566, 1828
SlaI	CTCGAG	2 cut(s)	2056, 2240
SmaI	CCCGGG	2 cut(s)	289, 1244
SmiMI	CAYNNNNRTG	3 cut(s)	800, 1640, 2072
SmlI	CTYRAG	4 cut(s)	275, 1679, 2056, 2240
SmoI	CTYRAG	4 cut(s)	275, 1679, 2056, 2240
Sse9I	AATT	3 cut(s)	523, 1093, 2011
SspDI	GGCGCC	1 cut(s)	1571
SspMI	CTAG	2 cut(s)	12, 87
SstI	GAGCTC	1 cut(s)	327
StyI	CCWWGG	3 cut(s)	609, 1443, 2109
TaaI	ACNGT	8 cut(s)	971, 1003, 1058, 1261, 1814, 1873, 2044, 2191
TaiI	ACGT	9 cut(s)	408, 834, 840, 1640, 1659, 1779, 1827, 2093, 2198
TasI	AATT	3 cut(s)	523, 1093, 2011
TatI	WGTACW	1 cut(s)	2052
TfiI	GAWTC	4 cut(s)	1165, 1281, 1411, 1452
TscAI	CASTG	5 cut(s)	167, 406, 433, 1023, 2047
TseFI	GTSAC	2 cut(s)	401, 2191
TseI	GCWGC	4 cut(s)	247, 1345, 1675, 2226
Tsp45I	GTSAC	2 cut(s)	401, 2191
TspGWI	ACGGA	4 cut(s)	379, 660, 667, 978
TspMI	CCCGGG	2 cut(s)	287, 1242
TspRI	CASTG	5 cut(s)	167, 406, 433, 1023, 2047
Tth111I	GACNNNGTC	2 cut(s)	830, 1532
VpaK11BI	GGWCC	8 cut(s)	473, 621, 675, 956, 1246, 1291, 1566, 1828
XagI	CCTNNNNNAGG	1 cut(s)	1433
XapI	RAATTY	1 cut(s)	2011
XhoI	CTCGAG	2 cut(s)	2056, 2240
XmaI	CCCGGG	2 cut(s)	287, 1242
XmiI	GTMKAC	3 cut(s)	1154, 1599, 1860
XmnI	GAANNNNTTC	1 cut(s)	1948
XspI	CTAG	2 cut(s)	12, 87
ZraI	GACGTC	1 cut(s)	406
ZrmI	AGTACT	1 cut(s)	2054

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.