Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0001288

Physical Location & Seq

Genomic Coordinates Reverse (-)

27022179 .. 27023997

Gene Structure 1819 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G294900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1011 bp

ATGGAGGAGCTGATCCACGGTCGTGAAGTTGCCAGTGGTCAACTTGGTAGGGTAATTAATCTTCATAATAATAGGTCACTTACTGTTAATGGTGATCATAATCATGATTTGGGATCGGGCAATGGTGAAGGTTTTGTTAATAAGATGTTGGGGTCATTTTCGAATACCCTTTTCATCTCAAATGGGAAGGAGATGAAGGAGTTTCATCATCATGATCAGATTATTCAAGTGAATACTAGTGGTGGTGGTGGTGGTGGTGCAGGTGCAGGTGCAGGTGCATCATCTTGGGATGTTGATCATCTGCTTGATCATGCTATTAAGTGTGAAGCTTCTAATGAGGAGACTTGTAAGAGTGCTTCGACCTCCTCCACGGATCGCAGAGGCTCTTACAAGAAAAGGAAGACTTGTCACTCTTGGATTAAAGACTCTCCTGCTTTGACTGAAGATGGTCAAGCATGGAGGAAGTACGGACAAAAACTCATCCTTAATGCCAAGCACCCAAGGAACTACTTTAGGTGCACCCACAAATTCGATCAAGCATGCCAAGCAACCAAGCACGTACAACAAGTTGAAGATGATCCACCATTGTTTCGTACCACATATTATGGCAACCACACATGCAGAGACCACTTGAAAGCTTGTGAGCTGGTCTTGGATTGTACAAGCCCTAGAGAGTCTTCAAAGTTCATCAGATTTGACGACAACAACCTCTCAAGCAAACAAGAGCACCCCTTTTTCTCATCTTTTAAATCGCTAAAACGAGAAGAATGTTTCAAGGAAGAGACGACGCCAAGTGATTATATGACAACCCAGCACCACAACCAATTAGCATTGAGTGATTATCTTGTATCACCTCCTGATCTTCCGGCATTCACGTCCCCTGGGCTCATGAGCGGGTTTGCATCGGCCAATACTGCTCAGCTTGACGAGGATGCGATTTATAGGAAAATGGCGGGGTTTAATTATGATGACTTTGCATTTGATGAGTTTCTGCAATATGAGTTGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003700 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009682 GO:0009719 GO:0009725 GO:0009751 GO:0009753 GO:0009755 GO:0009814 GO:0009862 GO:0009863 GO:0009864 GO:0009867 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031347 GO:0031349 GO:0032870 GO:0035690 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0045087 GO:0045088 GO:0045089 GO:0045892 GO:0045934 GO:0046677 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048831 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0080090 GO:0080134 GO:0098542 GO:0140110 GO:1900055 GO:1900056 GO:1901698 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:1905622 GO:2000024 GO:2000026 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

337

Amino Acids

37.72

Weight (kDa)

6.13

Isoelectric Point (pI)

46.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001288)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22570
fragaria_vesca	FvH4_6g09650 FvH4_6g09710 FvH4_6g09710 FvH4_6g09730 FvH4_6g09740 FvH4_6g09740 FvH4_6g09740 FvH4_6g09740 FvH4_6g09740 FvH4_6g09740 FvH4_6g09750 FvH4_6g09760
malus_domestica	MD04G1175500.v1.1 MD04G1175600.v1.1 MD12G1189200.v1.1 MD12G1189400.v1.1 MD12G1189600.v1.1 MD12G1189700.v1.1 MD12G1189900.v1.1
prunus_persica	Prupe.6G294900_v2.0.a1 Prupe.6G295000_v2.0.a1 Prupe.6G295100_v2.0.a1
pyrus_communis	pycom04g15480 pycom04g15490 pycom12g17650 pycom12g17690 pycom12g17700 pycom12g17730
rosa_chinensis	RchiOBHm_Chr3g0460351 RchiOBHm_Chr3g0460361
rosa_laevigata	RLG00000025018 RLG00000025019 RLG00000025027 RLG00000025113
rosa_multiflora	Rmu_sc0000449.1_g000005 Rmu_sc0004267.1_g000019
rosa_roxburghii	Rroxscaffold_6G00419560 Rroxscaffold_6G00419590
rosa_rugosa	Rorug03G0033500 Rorug03G0033500 Rorug03G0041400 Rorug03G0041800 Rorug03G0042000
rosa_samantha	Rh3AG100000 Rh3AG100100 Rh3BG094800 Rh3BG103900 Rh3BG104000 Rh3CG105700 Rh3CG105800 Rh3DG105300 Rh3DG105400
rosa_wichuraiana	Rw3G008480 Rw3G008490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	251, 257, 263
Acc36I	ACCTGC	3 cut(s)	251, 257, 263
AccBSI	CCGCTC	1 cut(s)	894
AciI	CCGC	2 cut(s)	894, 953
AclWI	GGATC	4 cut(s)	7, 121, 381, 572
AcoI	YGGCCR	1 cut(s)	906
AcsI	RAATTY	1 cut(s)	527
AcuI	CTGAAG	1 cut(s)	462
AcyI	GRCGYC	1 cut(s)	788
AfaI	GTAC	4 cut(s)	467, 561, 595, 661
AgsI	TTSAA	5 cut(s)	227, 572, 634, 681, 775
AhlI	ACTAGT	1 cut(s)	236
AjiI	CACGTC	1 cut(s)	876
AjnI	CCWGG	1 cut(s)	880
AleI	CACNNNNGTG	1 cut(s)	21
AluBI	AGCT	5 cut(s)	10, 329, 638, 646, 922
AluI	AGCT	5 cut(s)	10, 329, 638, 646, 922
Alw21I	GWGCWC	2 cut(s)	521, 729
Alw26I	GTCTC	3 cut(s)	335, 618, 776
Alw44I	GTGCAC	1 cut(s)	517
AlwI	GGATC	4 cut(s)	7, 121, 381, 572
AoxI	GGCC	1 cut(s)	906
ApaLI	GTGCAC	1 cut(s)	517
ApoI	RAATTY	1 cut(s)	527
ArsI	GACNNNNNNTTYG	2 cut(s)	962, 994
AseI	ATTAAT	1 cut(s)	57
AsuHPI	GGTGA	3 cut(s)	104, 137, 843
AsuII	TTCGAA	1 cut(s)	161
BaeGI	GKGCMC	1 cut(s)	521
BanII	GRGCYC	1 cut(s)	888
BarI	GAAGNNNNNNTAC	4 cut(s)	45, 77, 340, 372
BbsI	GAAGAC	2 cut(s)	407, 669
Bbv12I	GWGCWC	2 cut(s)	521, 729
BccI	CCATC	1 cut(s)	440
BciT130I	CCWGG	1 cut(s)	882
BclI	TGATCA	4 cut(s)	94, 214, 295, 307
BcoDI	GTCTC	3 cut(s)	335, 618, 776
BcuI	ACTAGT	1 cut(s)	236
BfaI	CTAG	2 cut(s)	237, 669
BfuAI	ACCTGC	3 cut(s)	251, 257, 263
BlpI	GCTNAGC	1 cut(s)	918
Bme1390I	CCNGG	1 cut(s)	882
BmgBI	CACGTC	1 cut(s)	876
BmrFI	CCNGG	1 cut(s)	882
BmsI	GCATC	3 cut(s)	287, 911, 922
BpiI	GAAGAC	2 cut(s)	407, 669
Bpu1102I	GCTNAGC	1 cut(s)	918
Bpu14I	TTCGAA	1 cut(s)	161
BpuEI	CTTGAG	1 cut(s)	697
BsaAI	YACGTR	1 cut(s)	559
BsaBI	GATNNNNATC	2 cut(s)	99, 294
BsaHI	GRCGYC	1 cut(s)	788
BsaI	GGTCTC	1 cut(s)	618
BsaJI	CCNNGG	5 cut(s)	16, 369, 500, 880, 881
Bse1I	ACTGG	1 cut(s)	33
Bse3DI	GCAATG	1 cut(s)	127
Bse8I	GATNNNNATC	2 cut(s)	99, 294
BseBI	CCWGG	1 cut(s)	882
BseDI	CCNNGG	5 cut(s)	16, 369, 500, 880, 881
BseGI	GGATG	3 cut(s)	295, 480, 937
BseJI	GATNNNNATC	2 cut(s)	99, 294
BseMI	GCAATG	1 cut(s)	127
BseMII	CTCAG	1 cut(s)	932
BseNI	ACTGG	1 cut(s)	33
BseRI	GAGGAG	3 cut(s)	20, 353, 355
BseSI	GKGCMC	1 cut(s)	521
BseYI	CCCAGC	1 cut(s)	810
BsgI	GTGCAG	3 cut(s)	279, 285, 291
Bsh1285I	CGRYCG	1 cut(s)	22
BshFI	GGCC	1 cut(s)	908
BsiEI	CGRYCG	1 cut(s)	22
BsiHKAI	GWGCWC	2 cut(s)	521, 729
BsiSI	CCGG	1 cut(s)	866
BslFI	GGGAC	1 cut(s)	862
BsmAI	GTCTC	3 cut(s)	335, 618, 776
BsmBI	CGTCTC	1 cut(s)	776
BsmFI	GGGAC	1 cut(s)	862
BsmI	GAATGC	1 cut(s)	869
BsnI	GGCC	1 cut(s)	908
Bso31I	GGTCTC	1 cut(s)	618
Bsp119I	TTCGAA	1 cut(s)	161
Bsp1286I	GDGCHC	3 cut(s)	521, 729, 888
Bsp1407I	TGTACA	1 cut(s)	659
Bsp1720I	GCTNAGC	1 cut(s)	918
BspACI	CCGC	2 cut(s)	894, 953
BspANI	GGCC	1 cut(s)	908
BspCNI	CTCAG	1 cut(s)	931
BspHI	TCATGA	3 cut(s)	103, 211, 888
BspMI	ACCTGC	3 cut(s)	251, 257, 263
BspPI	GGATC	4 cut(s)	7, 121, 381, 572
BspT104I	TTCGAA	1 cut(s)	161
BspTNI	GGTCTC	1 cut(s)	618
BsrBI	CCGCTC	1 cut(s)	894
BsrDI	GCAATG	1 cut(s)	127
BsrGI	TGTACA	1 cut(s)	659
BsrI	ACTGG	1 cut(s)	33
BssECI	CCNNGG	5 cut(s)	16, 369, 500, 880, 881
BssNI	GRCGYC	1 cut(s)	788
BssT1I	CCWWGG	1 cut(s)	500
Bst2UI	CCWGG	1 cut(s)	882
Bst4CI	ACNGT	2 cut(s)	20, 85
Bst6I	CTCTTC	1 cut(s)	774
BstACI	GRCGYC	1 cut(s)	788
BstAUI	TGTACA	1 cut(s)	659
BstBAI	YACGTR	1 cut(s)	559
BstBI	TTCGAA	1 cut(s)	161
BstC8I	GCNNGC	1 cut(s)	541
BstDEI	CTNAG	1 cut(s)	918
BstDSI	CCRYGG	2 cut(s)	16, 369
BstF5I	GGATG	3 cut(s)	295, 480, 937
BstMAI	GTCTC	3 cut(s)	335, 618, 776
BstMCI	CGRYCG	1 cut(s)	22
BstMWI	GCNNNNNNNGC	2 cut(s)	545, 914
BstNI	CCWGG	1 cut(s)	882
BstNSI	RCATGY	2 cut(s)	543, 621
BstSCI	CCNGG	1 cut(s)	880
BstSLI	GKGCMC	1 cut(s)	521
BstV2I	GAAGAC	2 cut(s)	407, 669
BsuRI	GGCC	1 cut(s)	908
BtgI	CCRYGG	2 cut(s)	16, 369
BtrI	CACGTC	1 cut(s)	876
BtsCI	GGATG	3 cut(s)	295, 480, 937
BtsIMutI	CAGTG	1 cut(s)	40
BveI	ACCTGC	3 cut(s)	251, 257, 263
Cac8I	GCNNGC	1 cut(s)	541
CciI	TCATGA	3 cut(s)	103, 211, 888
CseI	GACGC	1 cut(s)	796
Csp6I	GTAC	4 cut(s)	466, 560, 594, 660
CviAII	CATG	7 cut(s)	104, 212, 311, 456, 540, 618, 889
CviJI	RGCY	9 cut(s)	10, 329, 384, 638, 646, 666, 886, 908, 922
CviKI_1	RGCY	9 cut(s)	10, 329, 384, 638, 646, 666, 886, 908, 922
CviQI	GTAC	4 cut(s)	466, 560, 594, 660
DdeI	CTNAG	1 cut(s)	918
DraI	TTTAAA	1 cut(s)	748
EaeI	YGGCCR	1 cut(s)	906
Eam1104I	CTCTTC	1 cut(s)	774
EarI	CTCTTC	1 cut(s)	774
Eco130I	CCWWGG	1 cut(s)	500
Eco24I	GRGCYC	1 cut(s)	888
Eco31I	GGTCTC	1 cut(s)	618
Eco57I	CTGAAG	1 cut(s)	462
EcoRII	CCWGG	1 cut(s)	880
EcoT14I	CCWWGG	1 cut(s)	500
EcoT38I	GRGCYC	1 cut(s)	888
ErhI	CCWWGG	1 cut(s)	500
Esp3I	CGTCTC	1 cut(s)	776
FaeI	CATG	7 cut(s)	107, 215, 314, 459, 543, 621, 892
FalI	AAGNNNNNCTT	2 cut(s)	388, 420
FaqI	GGGAC	1 cut(s)	862
FatI	CATG	7 cut(s)	103, 211, 310, 455, 539, 617, 888
FauI	CCCGC	2 cut(s)	887, 946
FbaI	TGATCA	4 cut(s)	94, 214, 295, 307
FokI	GGATG	3 cut(s)	302, 467, 944
FriOI	GRGCYC	1 cut(s)	888
FspBI	CTAG	2 cut(s)	237, 669
GsaI	CCCAGC	1 cut(s)	814
HaeIII	GGCC	1 cut(s)	908
HapII	CCGG	1 cut(s)	866
HgaI	GACGC	1 cut(s)	796
Hin1I	GRCGYC	1 cut(s)	788
Hin1II	CATG	7 cut(s)	107, 215, 314, 459, 543, 621, 892
HincII	GTYRAC	1 cut(s)	41
HindII	GTYRAC	1 cut(s)	41
HindIII	AAGCTT	2 cut(s)	327, 636
HinfI	GANTC	2 cut(s)	425, 674
HpaII	CCGG	1 cut(s)	866
HphI	GGTGA	3 cut(s)	104, 137, 843
Hpy166II	GTNNAC	2 cut(s)	41, 519
Hpy188I	TCNGA	2 cut(s)	219, 692
Hpy188III	TCNNGA	5 cut(s)	23, 104, 212, 857, 889
Hpy8I	GTNNAC	2 cut(s)	41, 519
Hpy99I	CGWCG	1 cut(s)	790
HpyAV	CCTTC	3 cut(s)	122, 181, 190
HpyCH4III	ACNGT	2 cut(s)	20, 85
HpyCH4IV	ACGT	2 cut(s)	558, 875
HpyCH4V	TGCA	9 cut(s)	260, 266, 272, 278, 519, 621, 902, 977, 994
HpyF10VI	GCNNNNNNNGC	2 cut(s)	545, 914
HpyF3I	CTNAG	1 cut(s)	918
HpySE526I	ACGT	2 cut(s)	558, 875
Hsp92I	GRCGYC	1 cut(s)	788
Hsp92II	CATG	7 cut(s)	107, 215, 314, 459, 543, 621, 892
Ksp22I	TGATCA	4 cut(s)	94, 214, 295, 307
LmnI	GCTCC	1 cut(s)	7
LweI	GCATC	3 cut(s)	287, 911, 922
MaeI	CTAG	2 cut(s)	237, 669
MaeII	ACGT	2 cut(s)	558, 875
MaeIII	GTNAC	2 cut(s)	75, 407
MbiI	CCGCTC	1 cut(s)	894
MboII	GAAGA	8 cut(s)	53, 412, 455, 584, 669, 776, 791, 854
MhlI	GDGCHC	3 cut(s)	521, 729, 888
MluCI	AATT	4 cut(s)	54, 527, 824, 961
MlyI	GAGTC	2 cut(s)	419, 683
MnlI	CCTC	9 cut(s)	331, 373, 374, 376, 453, 719, 864, 922, 999
MseI	TTAA	8 cut(s)	57, 87, 138, 318, 420, 486, 747, 960
MslI	CAYNNNNRTG	3 cut(s)	21, 102, 210
MspI	CCGG	1 cut(s)	866
MspR9I	CCNGG	1 cut(s)	882
Mva1269I	GAATGC	1 cut(s)	869
MvaI	CCWGG	1 cut(s)	882
MwoI	GCNNNNNNNGC	2 cut(s)	545, 914
NlaIII	CATG	7 cut(s)	107, 215, 314, 459, 543, 621, 892
NmuCI	GTSAC	2 cut(s)	75, 407
NspI	RCATGY	2 cut(s)	543, 621
NspV	TTCGAA	1 cut(s)	161
OliI	CACNNNNGTG	1 cut(s)	21
PaeI	GCATGC	1 cut(s)	543
PagI	TCATGA	3 cut(s)	103, 211, 888
PaqCI	CACCTGC	3 cut(s)	251, 257, 263
PasI	CCCWGGG	1 cut(s)	881
PctI	GAATGC	1 cut(s)	869
PleI	GAGTC	2 cut(s)	419, 682
PpsI	GAGTC	2 cut(s)	419, 682
Ppu21I	YACGTR	1 cut(s)	559
PshBI	ATTAAT	1 cut(s)	57
Psp6I	CCWGG	1 cut(s)	880
PspFI	CCCAGC	1 cut(s)	810
PspGI	CCWGG	1 cut(s)	880
RsaI	GTAC	4 cut(s)	467, 561, 595, 661
RsaNI	GTAC	4 cut(s)	466, 560, 594, 660
RseI	CAYNNNNRTG	3 cut(s)	21, 102, 210
SaqAI	TTAA	8 cut(s)	57, 87, 138, 318, 420, 486, 747, 960
SchI	GAGTC	2 cut(s)	419, 683
ScrFI	CCNGG	1 cut(s)	882
SduI	GDGCHC	3 cut(s)	521, 729, 888
SfaNI	GCATC	3 cut(s)	287, 911, 922
SfuI	TTCGAA	1 cut(s)	161
SmiMI	CAYNNNNRTG	3 cut(s)	21, 102, 210
SmlI	CTYRAG	1 cut(s)	712
SmoI	CTYRAG	1 cut(s)	712
SpeI	ACTAGT	1 cut(s)	236
SphI	GCATGC	1 cut(s)	543
Sse9I	AATT	4 cut(s)	54, 527, 824, 961
SsiI	CCGC	2 cut(s)	894, 953
SspMI	CTAG	2 cut(s)	237, 669
StyD4I	CCNGG	1 cut(s)	880
StyI	CCWWGG	1 cut(s)	500
TaaI	ACNGT	2 cut(s)	20, 85
TaiI	ACGT	2 cut(s)	561, 878
TaqI	TCGA	3 cut(s)	161, 359, 531
TasI	AATT	4 cut(s)	54, 527, 824, 961
TatI	WGTACW	1 cut(s)	659
Tru1I	TTAA	8 cut(s)	57, 87, 138, 318, 420, 486, 747, 960
Tru9I	TTAA	8 cut(s)	57, 87, 138, 318, 420, 486, 747, 960
TscAI	CASTG	1 cut(s)	40
TseFI	GTSAC	2 cut(s)	75, 407
Tsp45I	GTSAC	2 cut(s)	75, 407
TspDTI	ATGAA	5 cut(s)	53, 163, 194, 209, 676
TspGWI	ACGGA	2 cut(s)	386, 483
TspRI	CASTG	1 cut(s)	40
VneI	GTGCAC	1 cut(s)	517
VspI	ATTAAT	1 cut(s)	57
XapI	RAATTY	1 cut(s)	527
XceI	RCATGY	2 cut(s)	543, 621
XspI	CTAG	2 cut(s)	237, 669

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.