Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0001288

Physical Location & Seq

Genomic Coordinates Forward (+)

8484847 .. 8486807

Gene Structure 1961 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG105400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 981 bp

ATGGAGTGGACTTGGCCGGAGAGTGTGTCGTCGAACCGGCAGAGGGTCGTGGAGGAGTTGGTTCAAGGCCGGGAGATGGTGAATCAGCTTCAGAGGTGTCTTAGTGGTGACGTCAGATCGGCGGAGGGTCTTGTTACGAAGATCTTGGGGTCGTTCACAAACACCCTTCGTATCTTGAATGGGAGTGAAGAGGCTAAAGAGGAGCTCATCTCTCAGATTCAAGCTAATAGTCCTACTAGTACTGTTACTGCTTCTGGTTCTGCTGCTGCGGGTACCGATTCATTGTCTTGGGATGCTCTTGATGATGCTGGTAAGTCCGAGGATTCGAATGAAGAGAGTTACAAGAGTACCGAAACGTTCAAGGATCGCAGAGGTTCATACAAGAGAAGAAAAACTTCACATTCATGGACCAAAGACACTCTGGATTTAGTGGACGATGGCCATGCATGGAGGAAGTACGGACAAAAGATGATCCTGAATACCAGACATCCAAGGAACTACTTCAGGTGCACTCATAAGTTTGATCAAGGCTGCAAAGCAACCAAACATGTGCAGAGGATTAAAGATGAACCCCAACTCTTTCGGACCACATACTATGGCAATCACACATGCACTGACTATCTCAGAGCTCCTGAGCTCATCTTAGATTCTTCAAGTTCTCAAGACTCTTCCAAGAATATGATCAGATTCGACAACACCAACAACGACTTCACCCGCAAACAAGAACATCCCTTTTTCTCATCCTTCACATCGATCAAAAAAGAGAGCGTCAAGGAAGAAGAGATGATCACACCAATTAATGATCATGATCATGTGATTCACCACAACCAACAATTGTCGTCGTGTGACTATCTCATGTCGCCTGGTCTAGGAGTGTTTGAGTCGTCCGCATCGACTATCGCATATGATCACGAGGATGTGTTTTCTAGGATAATGGTGGGATACTTCGATAATGAAGTAGATTTTCCATATGAATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003700 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009682 GO:0009719 GO:0009725 GO:0009751 GO:0009753 GO:0009755 GO:0009814 GO:0009862 GO:0009863 GO:0009864 GO:0009867 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031347 GO:0031349 GO:0032870 GO:0035690 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0045087 GO:0045088 GO:0045089 GO:0045892 GO:0045934 GO:0046677 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048831 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0080090 GO:0080134 GO:0098542 GO:0140110 GO:1900055 GO:1900056 GO:1901698 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:1905622 GO:2000024 GO:2000026 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

326

Amino Acids

37.37

Weight (kDa)

5.58

Isoelectric Point (pI)

50.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	145 - 204	1.6e-24	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001288)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22570
fragaria_vesca	FvH4_6g09650 FvH4_6g09710 FvH4_6g09710 FvH4_6g09730 FvH4_6g09740 FvH4_6g09740 FvH4_6g09740 FvH4_6g09740 FvH4_6g09740 FvH4_6g09740 FvH4_6g09750 FvH4_6g09760
malus_domestica	MD04G1175500.v1.1 MD04G1175600.v1.1 MD12G1189200.v1.1 MD12G1189400.v1.1 MD12G1189600.v1.1 MD12G1189700.v1.1 MD12G1189900.v1.1
prunus_persica	Prupe.6G294900_v2.0.a1 Prupe.6G295000_v2.0.a1 Prupe.6G295100_v2.0.a1
pyrus_communis	pycom04g15480 pycom04g15490 pycom12g17650 pycom12g17690 pycom12g17700 pycom12g17730
rosa_chinensis	RchiOBHm_Chr3g0460351 RchiOBHm_Chr3g0460361
rosa_laevigata	RLG00000025018 RLG00000025019 RLG00000025027 RLG00000025113
rosa_multiflora	Rmu_sc0000449.1_g000005 Rmu_sc0004267.1_g000019
rosa_roxburghii	Rroxscaffold_6G00419560 Rroxscaffold_6G00419590
rosa_rugosa	Rorug03G0033500 Rorug03G0033500 Rorug03G0041400 Rorug03G0041800 Rorug03G0042000
rosa_samantha	Rh3AG100000 Rh3AG100100 Rh3BG094800 Rh3BG103900 Rh3BG104000 Rh3CG105700 Rh3CG105800 Rh3DG105300 Rh3DG105400
rosa_wichuraiana	Rw3G008480 Rw3G008490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	114
Acc65I	GGTACC	1 cut(s)	272
AccB1I	GGYRCC	1 cut(s)	272
AciI	CCGC	4 cut(s)	122, 269, 715, 888
AclI	AACGTT	1 cut(s)	356
AclWI	GGATC	2 cut(s)	372, 466
AcoI	YGGCCR	2 cut(s)	14, 439
AcsI	RAATTY	1 cut(s)	974
AcuI	CTGAAG	2 cut(s)	74, 487
AcyI	GRCGYC	1 cut(s)	111
AfaI	GTAC	4 cut(s)	241, 274, 349, 458
AfiI	CCNNNNNNNGG	3 cut(s)	43, 76, 869
AflIII	ACRYGT	1 cut(s)	547
AgsI	TTSAA	5 cut(s)	65, 178, 221, 361, 654
AhlI	ACTAGT	1 cut(s)	236
AjnI	CCWGG	1 cut(s)	862
AjuI	GAANNNNNNNTTGG	2 cut(s)	692, 724
AluBI	AGCT	5 cut(s)	88, 205, 224, 629, 637
AluI	AGCT	5 cut(s)	88, 205, 224, 629, 637
Alw21I	GWGCWC	4 cut(s)	207, 512, 631, 639
Alw44I	GTGCAC	1 cut(s)	508
AlwI	GGATC	2 cut(s)	372, 466
AoxI	GGCC	3 cut(s)	14, 67, 439
ApaLI	GTGCAC	1 cut(s)	508
ApeKI	GCWGC	3 cut(s)	263, 266, 531
ApoI	RAATTY	1 cut(s)	974
AseI	ATTAAT	1 cut(s)	798
Asp700I	GAANNNNTTC	2 cut(s)	394, 500
Asp718I	GGTACC	1 cut(s)	272
AspS9I	GGNCC	2 cut(s)	408, 585
AsuC2I	CCSGG	1 cut(s)	71
AsuHPI	GGTGA	4 cut(s)	91, 119, 703, 812
AsuII	TTCGAA	1 cut(s)	326
AvaII	GGWCC	2 cut(s)	408, 585
BaeGI	GKGCMC	1 cut(s)	512
BaeI	ACNNNNGTAYC	2 cut(s)	331, 364
BalI	TGGCCA	1 cut(s)	441
BanI	GGYRCC	1 cut(s)	272
BanII	GRGCYC	3 cut(s)	207, 631, 639
BauI	CACGAG	1 cut(s)	911
Bbv12I	GWGCWC	4 cut(s)	207, 512, 631, 639
BbvI	GCAGC	3 cut(s)	250, 253, 518
BccI	CCATC	2 cut(s)	70, 431
BcgI	CGANNNNNNTGC	2 cut(s)	425, 459
BciT130I	CCWGG	1 cut(s)	864
BciVI	GTATCC	1 cut(s)	935
BclI	TGATCA	6 cut(s)	523, 681, 786, 802, 808, 907
BcnI	CCSGG	1 cut(s)	71
BcuI	ACTAGT	1 cut(s)	236
BfaI	CTAG	3 cut(s)	237, 869, 927
BfuI	GTATCC	1 cut(s)	935
BglII	AGATCT	1 cut(s)	141
BisI	GCNGC	3 cut(s)	264, 267, 532
BlsI	GCNGC	3 cut(s)	265, 268, 533
BmcAI	AGTACT	1 cut(s)	241
Bme1390I	CCNGG	2 cut(s)	71, 864
Bme18I	GGWCC	2 cut(s)	408, 585
BmgT120I	GGNCC	2 cut(s)	408, 585
BmiI	GGNNCC	1 cut(s)	274
BmrFI	CCNGG	2 cut(s)	71, 864
BmsI	GCATC	3 cut(s)	283, 295, 899
BplI	GAGNNNNNCTC	2 cut(s)	194, 226
Bpu10I	CCTNAGC	1 cut(s)	633
Bpu14I	TTCGAA	1 cut(s)	326
BpuEI	CTTGAG	1 cut(s)	645
BpuMI	CCSGG	1 cut(s)	71
Bsa29I	ATCGAT	1 cut(s)	752
BsaBI	GATNNNNATC	1 cut(s)	807
BsaHI	GRCGYC	1 cut(s)	111
BsaJI	CCNNGG	2 cut(s)	318, 491
BsaXI	ACNNNNNCTCC	2 cut(s)	11, 41
Bsc4I	CCNNNNNNNGG	3 cut(s)	43, 76, 869
Bse118I	RCCGGY	1 cut(s)	36
Bse8I	GATNNNNATC	1 cut(s)	807
BseBI	CCWGG	1 cut(s)	864
BseCI	ATCGAT	1 cut(s)	752
BseDI	CCNNGG	2 cut(s)	318, 491
BseGI	GGATG	5 cut(s)	298, 487, 727, 740, 922
BseJI	GATNNNNATC	1 cut(s)	807
BseLI	CCNNNNNNNGG	3 cut(s)	43, 76, 869
BseMII	CTCAG	3 cut(s)	227, 624, 637
BseRI	GAGGAG	2 cut(s)	68, 215
BseSI	GKGCMC	1 cut(s)	512
BseXI	GCAGC	3 cut(s)	250, 253, 518
BsgI	GTGCAG	1 cut(s)	572
BshFI	GGCC	3 cut(s)	16, 69, 441
BshNI	GGYRCC	1 cut(s)	272
BshVI	ATCGAT	1 cut(s)	752
BsiHKAI	GWGCWC	4 cut(s)	207, 512, 631, 639
BsiSI	CCGG	3 cut(s)	17, 37, 70
BslI	CCNNNNNNNGG	3 cut(s)	43, 76, 869
BsnI	GGCC	3 cut(s)	16, 69, 441
Bsp119I	TTCGAA	1 cut(s)	326
Bsp1286I	GDGCHC	4 cut(s)	207, 512, 631, 639
BspACI	CCGC	4 cut(s)	122, 269, 715, 888
BspANI	GGCC	3 cut(s)	16, 69, 441
BspCNI	CTCAG	3 cut(s)	226, 625, 636
BspDI	ATCGAT	1 cut(s)	752
BspHI	TCATGA	1 cut(s)	805
BspLI	GGNNCC	1 cut(s)	274
BspPI	GGATC	2 cut(s)	372, 466
BspT104I	TTCGAA	1 cut(s)	326
BspT107I	GGYRCC	1 cut(s)	272
BsrFI	RCCGGY	1 cut(s)	36
BssAI	RCCGGY	1 cut(s)	36
BssECI	CCNNGG	2 cut(s)	318, 491
BssNI	GRCGYC	1 cut(s)	111
BssSI	CACGAG	1 cut(s)	911
BssT1I	CCWWGG	1 cut(s)	491
Bst2BI	CACGAG	1 cut(s)	911
Bst2UI	CCWGG	1 cut(s)	864
Bst4CI	ACNGT	1 cut(s)	244
Bst6I	CTCTTC	4 cut(s)	183, 327, 673, 774
BstACI	GRCGYC	1 cut(s)	111
BstBI	TTCGAA	1 cut(s)	326
BstDEI	CTNAG	5 cut(s)	101, 213, 623, 633, 643
BstENI	CCTNNNNNAGG	1 cut(s)	867
BstF5I	GGATG	5 cut(s)	298, 487, 727, 740, 922
BstNI	CCWGG	1 cut(s)	864
BstNSI	RCATGY	2 cut(s)	551, 612
BstSCI	CCNGG	2 cut(s)	69, 862
BstSLI	GKGCMC	1 cut(s)	512
BstV1I	GCAGC	3 cut(s)	250, 253, 518
BstX2I	RGATCY	1 cut(s)	141
BstYI	RGATCY	1 cut(s)	141
Bsu15I	ATCGAT	1 cut(s)	752
BsuI	GTATCC	1 cut(s)	935
BsuRI	GGCC	3 cut(s)	16, 69, 441
BsuTUI	ATCGAT	1 cut(s)	752
BtsCI	GGATG	5 cut(s)	298, 487, 727, 740, 922
BtsIMutI	CAGTG	1 cut(s)	612
CciI	TCATGA	1 cut(s)	805
Cfr10I	RCCGGY	1 cut(s)	36
Cfr13I	GGNCC	2 cut(s)	408, 585
ClaI	ATCGAT	1 cut(s)	752
CseI	GACGC	1 cut(s)	757
Csp6I	GTAC	4 cut(s)	240, 273, 348, 457
CviAII	CATG	8 cut(s)	405, 443, 447, 548, 609, 806, 812, 856
CviQI	GTAC	4 cut(s)	240, 273, 348, 457
DdeI	CTNAG	5 cut(s)	101, 213, 623, 633, 643
EaeI	YGGCCR	2 cut(s)	14, 439
Eam1104I	CTCTTC	4 cut(s)	183, 327, 673, 774
EarI	CTCTTC	4 cut(s)	183, 327, 673, 774
EciI	GGCGGA	1 cut(s)	137
Ecl136II	GAGCTC	3 cut(s)	205, 629, 637
Eco130I	CCWWGG	1 cut(s)	491
Eco24I	GRGCYC	3 cut(s)	207, 631, 639
Eco47I	GGWCC	2 cut(s)	408, 585
Eco53kI	GAGCTC	3 cut(s)	205, 629, 637
Eco57I	CTGAAG	2 cut(s)	74, 487
EcoICRI	GAGCTC	3 cut(s)	205, 629, 637
EcoNI	CCTNNNNNAGG	1 cut(s)	867
EcoRII	CCWGG	1 cut(s)	862
EcoT14I	CCWWGG	1 cut(s)	491
EcoT22I	ATGCAT	1 cut(s)	448
EcoT38I	GRGCYC	3 cut(s)	207, 631, 639
ErhI	CCWWGG	1 cut(s)	491
FaeI	CATG	8 cut(s)	408, 446, 450, 551, 612, 809, 815, 859
FalI	AAGNNNNNCTT	2 cut(s)	379, 411
FatI	CATG	8 cut(s)	404, 442, 446, 547, 608, 805, 811, 855
FauI	CCCGC	2 cut(s)	262, 722
FauNDI	CATATG	2 cut(s)	904, 970
FbaI	TGATCA	6 cut(s)	523, 681, 786, 802, 808, 907
Fnu4HI	GCNGC	3 cut(s)	264, 267, 532
FokI	GGATG	5 cut(s)	305, 474, 714, 727, 929
FriOI	GRGCYC	3 cut(s)	207, 631, 639
Fsp4HI	GCNGC	3 cut(s)	264, 267, 532
FspBI	CTAG	3 cut(s)	237, 869, 927
GluI	GCNGC	3 cut(s)	264, 267, 532
HaeIII	GGCC	3 cut(s)	16, 69, 441
HapII	CCGG	3 cut(s)	17, 37, 70
HgaI	GACGC	1 cut(s)	757
Hin1I	GRCGYC	1 cut(s)	111
Hin1II	CATG	8 cut(s)	408, 446, 450, 551, 612, 809, 815, 859
HinfI	GANTC	9 cut(s)	82, 217, 278, 323, 647, 665, 687, 817, 881
HpaII	CCGG	3 cut(s)	17, 37, 70
HphI	GGTGA	4 cut(s)	91, 119, 703, 812
Hpy166II	GTNNAC	4 cut(s)	9, 156, 433, 510
Hpy188I	TCNGA	7 cut(s)	93, 116, 216, 319, 585, 626, 686
Hpy188III	TCNNGA	8 cut(s)	175, 299, 422, 475, 632, 662, 806, 911
Hpy8I	GTNNAC	4 cut(s)	9, 156, 433, 510
Hpy99I	CGWCG	2 cut(s)	34, 844
HpyAV	CCTTC	2 cut(s)	176, 754
HpyCH4III	ACNGT	1 cut(s)	244
HpyCH4IV	ACGT	2 cut(s)	111, 356
HpyCH4V	TGCA	5 cut(s)	446, 510, 534, 553, 612
HpyF3I	CTNAG	5 cut(s)	101, 213, 623, 633, 643
HpySE526I	ACGT	2 cut(s)	111, 356
Hsp92I	GRCGYC	1 cut(s)	111
Hsp92II	CATG	8 cut(s)	408, 446, 450, 551, 612, 809, 815, 859
KpnI	GGTACC	1 cut(s)	276
Ksp22I	TGATCA	6 cut(s)	523, 681, 786, 802, 808, 907
LmnI	GCTCC	2 cut(s)	202, 634
Lsp1109I	GCAGC	3 cut(s)	250, 253, 518
LweI	GCATC	3 cut(s)	283, 295, 899
MaeI	CTAG	3 cut(s)	237, 869, 927
MaeII	ACGT	2 cut(s)	111, 356
MaeIII	GTNAC	5 cut(s)	107, 133, 244, 338, 845
MboII	GAAGA	8 cut(s)	151, 200, 344, 399, 642, 660, 788, 791
MfeI	CAATTG	1 cut(s)	833
MflI	RGATCY	1 cut(s)	141
MhlI	GDGCHC	4 cut(s)	207, 512, 631, 639
MlsI	TGGCCA	1 cut(s)	441
MluCI	AATT	3 cut(s)	795, 833, 974
MluNI	TGGCCA	1 cut(s)	441
MlyI	GAGTC	2 cut(s)	659, 890
Mox20I	TGGCCA	1 cut(s)	441
Mph1103I	ATGCAT	1 cut(s)	448
MroXI	GAANNNNTTC	2 cut(s)	394, 500
MscI	TGGCCA	1 cut(s)	441
MseI	TTAA	2 cut(s)	561, 798
MslI	CAYNNNNRTG	3 cut(s)	403, 810, 915
Msp20I	TGGCCA	1 cut(s)	441
MspI	CCGG	3 cut(s)	17, 37, 70
MspR9I	CCNGG	2 cut(s)	71, 864
MunI	CAATTG	1 cut(s)	833
MvaI	CCWGG	1 cut(s)	864
NciI	CCSGG	1 cut(s)	71
NdeI	CATATG	2 cut(s)	904, 970
NlaIII	CATG	8 cut(s)	408, 446, 450, 551, 612, 809, 815, 859
NlaIV	GGNNCC	1 cut(s)	274
NmuCI	GTSAC	2 cut(s)	107, 845
NsiI	ATGCAT	1 cut(s)	448
NspI	RCATGY	2 cut(s)	551, 612
NspV	TTCGAA	1 cut(s)	326
PagI	TCATGA	1 cut(s)	805
PciI	ACATGT	1 cut(s)	547
PcsI	WCGNNNNNNNCGW	1 cut(s)	890
PdmI	GAANNNNTTC	2 cut(s)	394, 500
PfeI	GAWTC	7 cut(s)	82, 217, 278, 323, 647, 687, 817
PkrI	GCNGC	3 cut(s)	265, 268, 533
PleI	GAGTC	2 cut(s)	659, 889
PpsI	GAGTC	2 cut(s)	659, 889
PscI	ACATGT	1 cut(s)	547
PshBI	ATTAAT	1 cut(s)	798
Psp124BI	GAGCTC	3 cut(s)	207, 631, 639
Psp1406I	AACGTT	1 cut(s)	356
Psp6I	CCWGG	1 cut(s)	862
PspGI	CCWGG	1 cut(s)	862
PspN4I	GGNNCC	1 cut(s)	274
PspPI	GGNCC	2 cut(s)	408, 585
PsuI	RGATCY	1 cut(s)	141
RsaI	GTAC	4 cut(s)	241, 274, 349, 458
RsaNI	GTAC	4 cut(s)	240, 273, 348, 457
RseI	CAYNNNNRTG	3 cut(s)	403, 810, 915
SacI	GAGCTC	3 cut(s)	207, 631, 639
SaqAI	TTAA	2 cut(s)	561, 798
SatI	GCNGC	3 cut(s)	264, 267, 532
Sau96I	GGNCC	2 cut(s)	408, 585
ScaI	AGTACT	1 cut(s)	241
SchI	GAGTC	2 cut(s)	659, 890
ScrFI	CCNGG	2 cut(s)	71, 864
SduI	GDGCHC	4 cut(s)	207, 512, 631, 639
SfaNI	GCATC	3 cut(s)	283, 295, 899
SfuI	TTCGAA	1 cut(s)	326
SinI	GGWCC	2 cut(s)	408, 585
SmiMI	CAYNNNNRTG	3 cut(s)	403, 810, 915
SmlI	CTYRAG	1 cut(s)	660
SmoI	CTYRAG	1 cut(s)	660
SpeI	ACTAGT	1 cut(s)	236
Sse9I	AATT	3 cut(s)	795, 833, 974
SsiI	CCGC	4 cut(s)	122, 269, 715, 888
SspMI	CTAG	3 cut(s)	237, 869, 927
SstI	GAGCTC	3 cut(s)	207, 631, 639
StyD4I	CCNGG	2 cut(s)	69, 862
StyI	CCWWGG	1 cut(s)	491
TaaI	ACNGT	1 cut(s)	244
TaiI	ACGT	2 cut(s)	114, 359
TaqI	TCGA	6 cut(s)	32, 326, 690, 752, 893, 948
TasI	AATT	3 cut(s)	795, 833, 974
TatI	WGTACW	1 cut(s)	239
TfiI	GAWTC	7 cut(s)	82, 217, 278, 323, 647, 687, 817
Tru1I	TTAA	2 cut(s)	561, 798
Tru9I	TTAA	2 cut(s)	561, 798
TscAI	CASTG	1 cut(s)	619
TseFI	GTSAC	2 cut(s)	107, 845
TseI	GCWGC	3 cut(s)	263, 266, 531
Tsp45I	GTSAC	2 cut(s)	107, 845
TspDTI	ATGAA	6 cut(s)	270, 345, 366, 393, 582, 969
TspGWI	ACGGA	1 cut(s)	474
TspRI	CASTG	1 cut(s)	619
VneI	GTGCAC	1 cut(s)	508
VpaK11BI	GGWCC	2 cut(s)	408, 585
VspI	ATTAAT	1 cut(s)	798
XagI	CCTNNNNNAGG	1 cut(s)	867
XapI	RAATTY	1 cut(s)	974
XceI	RCATGY	2 cut(s)	551, 612
XcmI	CCANNNNNNNNNTGG	1 cut(s)	418
XmnI	GAANNNNTTC	2 cut(s)	394, 500
XspI	CTAG	3 cut(s)	237, 869, 927
ZraI	GACGTC	1 cut(s)	112
ZrmI	AGTACT	1 cut(s)	241
Zsp2I	ATGCAT	1 cut(s)	448

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.