Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0001288

Physical Location & Seq

Genomic Coordinates Reverse (-)

27032355 .. 27034523

Gene Structure 2169 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G295100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1002 bp

ATGGAGTTGTCTTGGCCGGAGAGTGTGCTATCAAATAGGGAAAGGGTGATGGAGGAGTTGATCCAAGGGCGTGAGCTTGCAAGTCAACTTTGTAGGGTTCTTGATGATCATAAGTCAACACTTGTTAGTGGTTGTGGTGGAGGAGATGTTGGGTCGGCTGAGGGTCTTGTTACTAAGATTTTGGGGTCATTTGCAAATACCCTTTTGATCTTAAATGGGAAGGAGGCTGACGGAGAGATTGTTTCTGGTGATCGGATTCAAGGGAATAGTAGTGGTGGTGGGTCTGCAGATTCATCATCTTGGGATGCCAATCATGCTATTATTAAGTCTGAAGATTTTCATGAGGAGATCAGTTGTAAGAGTGCTTCAACCTTCAAGGATCGTAGGGGTTCTTACAAGAGAAGGAAAACTTCACACTCTTGGACTAGAGACACTCCGGCTTTGACTGACGATGGTCATGCATGGAGGAAGTACGGACAAAAAGTCATCCACAATGCCAATCACCCAAGGAACTACTTTAGGTGCACCCACAAATTCGATCAATCGTGCCAAGCAACCAAACACGTGCAACAAATTGTAGATGATCCACCAGTTTTTCGGACCACATATTATGGCAATCACACATGCAGAGACTACTTGAAAGCTTCTGAGTTGATCTTTGATTGCACAAGCCATACAGAGTCTTCAAGTTACATCAGATTTGGCGACATTAAGCAAGACCACCCCTTTTTCTCATCTTTCACATCAGTGAAGAAAGAGGTCGTCGTCAAGGAAGAGAAACCACAACCAAGTGATGAGCATTTGATGGCAAGCCACCACCACAACCGTTCATCATCCGGTGATTATAATGTGTCACCTCATCCGACGGCGTTCAAGTCGTCTTGTCCCCTGAGCGGGCTTTCGTCAACCATTGATCCGTATGATCATGAGGGCGATGTGATGTCTGGTTTAATTGTGGGGCCTTATTACTTTGATGATGAAGTTTTGCAATATGAATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003700 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009682 GO:0009719 GO:0009725 GO:0009751 GO:0009753 GO:0009755 GO:0009814 GO:0009862 GO:0009863 GO:0009864 GO:0009867 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031347 GO:0031349 GO:0032870 GO:0035690 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0045087 GO:0045088 GO:0045089 GO:0045892 GO:0045934 GO:0046677 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048831 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0080090 GO:0080134 GO:0098542 GO:0140110 GO:1900055 GO:1900056 GO:1901698 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:1905622 GO:2000024 GO:2000026 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

334

Amino Acids

37.22

Weight (kDa)

5.89

Isoelectric Point (pI)

45.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001288)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22570
fragaria_vesca	FvH4_6g09650 FvH4_6g09710 FvH4_6g09710 FvH4_6g09730 FvH4_6g09740 FvH4_6g09740 FvH4_6g09740 FvH4_6g09740 FvH4_6g09740 FvH4_6g09740 FvH4_6g09750 FvH4_6g09760
malus_domestica	MD04G1175500.v1.1 MD04G1175600.v1.1 MD12G1189200.v1.1 MD12G1189400.v1.1 MD12G1189600.v1.1 MD12G1189700.v1.1 MD12G1189900.v1.1
prunus_persica	Prupe.6G294900_v2.0.a1 Prupe.6G295000_v2.0.a1 Prupe.6G295100_v2.0.a1
pyrus_communis	pycom04g15480 pycom04g15490 pycom12g17650 pycom12g17690 pycom12g17700 pycom12g17730
rosa_chinensis	RchiOBHm_Chr3g0460351 RchiOBHm_Chr3g0460361
rosa_laevigata	RLG00000025018 RLG00000025019 RLG00000025027 RLG00000025113
rosa_multiflora	Rmu_sc0000449.1_g000005 Rmu_sc0004267.1_g000019
rosa_roxburghii	Rroxscaffold_6G00419560 Rroxscaffold_6G00419590
rosa_rugosa	Rorug03G0033500 Rorug03G0033500 Rorug03G0041400 Rorug03G0041800 Rorug03G0042000
rosa_samantha	Rh3AG100000 Rh3AG100100 Rh3BG094800 Rh3BG103900 Rh3BG104000 Rh3CG105700 Rh3CG105800 Rh3DG105300 Rh3DG105400
rosa_wichuraiana	Rw3G008480 Rw3G008490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	846
AccBSI	CCGCTC	1 cut(s)	894
AciI	CCGC	1 cut(s)	894
AclWI	GGATC	4 cut(s)	55, 387, 578, 908
AcoI	YGGCCR	1 cut(s)	14
AcsI	RAATTY	2 cut(s)	533, 995
AcuI	CTGAAG	1 cut(s)	351
AcvI	CACGTG	1 cut(s)	565
AfaI	GTAC	1 cut(s)	473
AfiI	CCNNNNNNNGG	2 cut(s)	893, 894
AflIII	ACRYGT	1 cut(s)	562
AgsI	TTSAA	6 cut(s)	260, 369, 376, 640, 687, 874
AhdI	GACNNNNNGTC	1 cut(s)	482
AleI	CACNNNNGTG	1 cut(s)	746
AluBI	AGCT	2 cut(s)	76, 644
AluI	AGCT	2 cut(s)	76, 644
Alw21I	GWGCWC	1 cut(s)	527
Alw26I	GTCTC	2 cut(s)	423, 624
Alw44I	GTGCAC	1 cut(s)	523
AlwI	GGATC	4 cut(s)	55, 387, 578, 908
AoxI	GGCC	2 cut(s)	14, 959
ApaLI	GTGCAC	1 cut(s)	523
ApoI	RAATTY	2 cut(s)	533, 995
Asp700I	GAANNNNTTC	1 cut(s)	336
AspS9I	GGNCC	2 cut(s)	600, 959
AsuHPI	GGTGA	5 cut(s)	58, 260, 494, 846, 851
AvaII	GGWCC	1 cut(s)	600
BaeGI	GKGCMC	1 cut(s)	527
BarI	GAAGNNNNNNTAC	2 cut(s)	349, 381
BbrPI	CACGTG	1 cut(s)	565
BbsI	GAAGAC	1 cut(s)	675
Bbv12I	GWGCWC	1 cut(s)	527
BbvCI	CCTCAGC	1 cut(s)	159
BccI	CCATC	3 cut(s)	43, 446, 799
BceAI	ACGGC	1 cut(s)	882
BcgI	CGANNNNNNTGC	2 cut(s)	440, 474
BclI	TGATCA	2 cut(s)	106, 922
BcoDI	GTCTC	2 cut(s)	423, 624
BfaI	CTAG	1 cut(s)	426
BfmI	CTRYAG	1 cut(s)	285
Bme18I	GGWCC	1 cut(s)	600
BmeRI	GACNNNNNGTC	1 cut(s)	482
BmgT120I	GGNCC	2 cut(s)	600, 959
BmiI	GGNNCC	1 cut(s)	960
BmsI	GCATC	1 cut(s)	295
BoxI	GACNNNNGTC	1 cut(s)	453
BpiI	GAAGAC	1 cut(s)	675
Bpu10I	CCTNAGC	2 cut(s)	159, 890
BsaAI	YACGTR	1 cut(s)	565
BsaBI	GATNNNNATC	1 cut(s)	309
BsaJI	CCNNGG	2 cut(s)	64, 506
BsaWI	WCCGGW	1 cut(s)	836
BsaXI	ACNNNNNCTCC	4 cut(s)	132, 162, 225, 255
Bsc4I	CCNNNNNNNGG	2 cut(s)	893, 894
Bse1I	ACTGG	1 cut(s)	590
Bse8I	GATNNNNATC	1 cut(s)	309
BseDI	CCNNGG	2 cut(s)	64, 506
BseGI	GGATG	4 cut(s)	310, 486, 833, 859
BseJI	GATNNNNATC	1 cut(s)	309
BseLI	CCNNNNNNNGG	2 cut(s)	893, 894
BseMII	CTCAG	3 cut(s)	150, 639, 881
BseNI	ACTGG	1 cut(s)	590
BseRI	GAGGAG	3 cut(s)	68, 156, 359
BseSI	GKGCMC	1 cut(s)	527
BshFI	GGCC	2 cut(s)	16, 961
BsiHKAI	GWGCWC	1 cut(s)	527
BsiSI	CCGG	3 cut(s)	17, 437, 837
BslFI	GGGAC	1 cut(s)	870
BslI	CCNNNNNNNGG	2 cut(s)	893, 894
BsmAI	GTCTC	2 cut(s)	423, 624
BsmFI	GGGAC	1 cut(s)	870
BsnI	GGCC	2 cut(s)	16, 961
Bsp1286I	GDGCHC	1 cut(s)	527
BspACI	CCGC	1 cut(s)	894
BspANI	GGCC	2 cut(s)	16, 961
BspCNI	CTCAG	3 cut(s)	151, 640, 882
BspHI	TCATGA	2 cut(s)	340, 925
BspLI	GGNNCC	1 cut(s)	960
BspMAI	CTGCAG	1 cut(s)	289
BspPI	GGATC	4 cut(s)	55, 387, 578, 908
BsrBI	CCGCTC	1 cut(s)	894
BsrI	ACTGG	1 cut(s)	590
BssECI	CCNNGG	2 cut(s)	64, 506
BssT1I	CCWWGG	2 cut(s)	64, 506
Bst4CI	ACNGT	1 cut(s)	827
Bst6I	CTCTTC	1 cut(s)	768
BstBAI	YACGTR	1 cut(s)	565
BstC8I	GCNNGC	3 cut(s)	78, 811, 896
BstDEI	CTNAG	4 cut(s)	159, 174, 648, 890
BstF5I	GGATG	4 cut(s)	310, 486, 833, 859
BstMAI	GTCTC	2 cut(s)	423, 624
BstMWI	GCNNNNNNNGC	1 cut(s)	314
BstNSI	RCATGY	1 cut(s)	627
BstPAI	GACNNNNGTC	1 cut(s)	453
BstSFI	CTRYAG	1 cut(s)	285
BstSLI	GKGCMC	1 cut(s)	527
BstV2I	GAAGAC	1 cut(s)	675
BsuRI	GGCC	2 cut(s)	16, 961
BtgZI	GCGATG	1 cut(s)	948
BtsCI	GGATG	4 cut(s)	310, 486, 833, 859
BtsIMutI	CAGTG	1 cut(s)	753
Cac8I	GCNNGC	3 cut(s)	78, 811, 896
CciI	TCATGA	2 cut(s)	340, 925
Cfr13I	GGNCC	2 cut(s)	600, 959
Csp6I	GTAC	1 cut(s)	472
CviAII	CATG	6 cut(s)	314, 341, 458, 462, 624, 926
CviQI	GTAC	1 cut(s)	472
DdeI	CTNAG	4 cut(s)	159, 174, 648, 890
DriI	GACNNNNNGTC	1 cut(s)	482
EaeI	YGGCCR	1 cut(s)	14
Eam1104I	CTCTTC	1 cut(s)	768
Eam1105I	GACNNNNNGTC	1 cut(s)	482
EarI	CTCTTC	1 cut(s)	768
Eco130I	CCWWGG	2 cut(s)	64, 506
Eco47I	GGWCC	1 cut(s)	600
Eco57I	CTGAAG	1 cut(s)	351
Eco72I	CACGTG	1 cut(s)	565
EcoO109I	RGGNCCY	1 cut(s)	959
EcoT14I	CCWWGG	2 cut(s)	64, 506
EcoT22I	ATGCAT	1 cut(s)	463
ErhI	CCWWGG	2 cut(s)	64, 506
FaeI	CATG	6 cut(s)	317, 344, 461, 465, 627, 929
FalI	AAGNNNNNCTT	2 cut(s)	394, 426
FaqI	GGGAC	1 cut(s)	870
FatI	CATG	6 cut(s)	313, 340, 457, 461, 623, 925
FauI	CCCGC	1 cut(s)	887
FbaI	TGATCA	2 cut(s)	106, 922
FokI	GGATG	4 cut(s)	317, 473, 820, 846
FspBI	CTAG	1 cut(s)	426
HaeIII	GGCC	2 cut(s)	16, 961
HapII	CCGG	3 cut(s)	17, 437, 837
Hin1II	CATG	6 cut(s)	317, 344, 461, 465, 627, 929
HincII	GTYRAC	3 cut(s)	86, 117, 906
HindII	GTYRAC	3 cut(s)	86, 117, 906
HindIII	AAGCTT	1 cut(s)	642
HinfI	GANTC	3 cut(s)	256, 290, 680
HpaII	CCGG	3 cut(s)	17, 437, 837
HphI	GGTGA	5 cut(s)	58, 260, 494, 846, 851
Hpy166II	GTNNAC	4 cut(s)	86, 117, 525, 906
Hpy188I	TCNGA	6 cut(s)	255, 331, 600, 649, 698, 864
Hpy188III	TCNNGA	3 cut(s)	101, 341, 926
Hpy8I	GTNNAC	4 cut(s)	86, 117, 525, 906
Hpy99I	CGWCG	2 cut(s)	767, 868
HpyAV	CCTTC	3 cut(s)	214, 382, 396
HpyCH4III	ACNGT	1 cut(s)	827
HpyCH4IV	ACGT	1 cut(s)	564
HpyCH4V	TGCA	9 cut(s)	80, 194, 287, 461, 525, 568, 627, 666, 988
HpyF10VI	GCNNNNNNNGC	1 cut(s)	314
HpyF3I	CTNAG	4 cut(s)	159, 174, 648, 890
HpySE526I	ACGT	1 cut(s)	564
Hsp92II	CATG	6 cut(s)	317, 344, 461, 465, 627, 929
Ksp22I	TGATCA	2 cut(s)	106, 922
LpnPI	CCDG	7 cut(s)	30, 231, 450, 603, 850, 902, 930
LweI	GCATC	1 cut(s)	295
MaeI	CTAG	1 cut(s)	426
MaeII	ACGT	1 cut(s)	564
MaeIII	GTNAC	3 cut(s)	169, 689, 852
MbiI	CCGCTC	1 cut(s)	894
MboII	GAAGA	4 cut(s)	344, 675, 763, 785
MhlI	GDGCHC	1 cut(s)	527
MluCI	AATT	4 cut(s)	533, 573, 951, 995
MlyI	GAGTC	1 cut(s)	689
MmeI	TCCRAC	1 cut(s)	887
MnlI	CCTC	9 cut(s)	46, 134, 154, 217, 337, 459, 751, 867, 922
Mph1103I	ATGCAT	1 cut(s)	463
MroXI	GAANNNNTTC	1 cut(s)	336
MseI	TTAA	4 cut(s)	212, 324, 711, 950
MslI	CAYNNNNRTG	1 cut(s)	746
MspI	CCGG	3 cut(s)	17, 437, 837
MwoI	GCNNNNNNNGC	1 cut(s)	314
NlaIII	CATG	6 cut(s)	317, 344, 461, 465, 627, 929
NlaIV	GGNNCC	1 cut(s)	960
NmuCI	GTSAC	1 cut(s)	852
NsiI	ATGCAT	1 cut(s)	463
NspI	RCATGY	1 cut(s)	627
OliI	CACNNNNGTG	1 cut(s)	746
PagI	TCATGA	2 cut(s)	340, 925
PdmI	GAANNNNTTC	1 cut(s)	336
PfeI	GAWTC	2 cut(s)	256, 290
PleI	GAGTC	1 cut(s)	688
PmaCI	CACGTG	1 cut(s)	565
PmlI	CACGTG	1 cut(s)	565
PpsI	GAGTC	1 cut(s)	688
Ppu21I	YACGTR	1 cut(s)	565
PshAI	GACNNNNGTC	1 cut(s)	453
PsiI	TTATAA	1 cut(s)	846
PspCI	CACGTG	1 cut(s)	565
PspN4I	GGNNCC	1 cut(s)	960
PspPI	GGNCC	2 cut(s)	600, 959
PstI	CTGCAG	1 cut(s)	289
RsaI	GTAC	1 cut(s)	473
RsaNI	GTAC	1 cut(s)	472
RseI	CAYNNNNRTG	1 cut(s)	746
SaqAI	TTAA	4 cut(s)	212, 324, 711, 950
Sau96I	GGNCC	2 cut(s)	600, 959
SchI	GAGTC	1 cut(s)	689
SduI	GDGCHC	1 cut(s)	527
SetI	ASST	7 cut(s)	78, 374, 524, 567, 646, 762, 859
SfaNI	GCATC	1 cut(s)	295
SfcI	CTRYAG	1 cut(s)	285
SinI	GGWCC	1 cut(s)	600
SmiMI	CAYNNNNRTG	1 cut(s)	746
Sse9I	AATT	4 cut(s)	533, 573, 951, 995
SsiI	CCGC	1 cut(s)	894
SspMI	CTAG	1 cut(s)	426
StyI	CCWWGG	2 cut(s)	64, 506
TaaI	ACNGT	1 cut(s)	827
TaiI	ACGT	1 cut(s)	567
TaqI	TCGA	1 cut(s)	537
TasI	AATT	4 cut(s)	533, 573, 951, 995
TfiI	GAWTC	2 cut(s)	256, 290
Tru1I	TTAA	4 cut(s)	212, 324, 711, 950
Tru9I	TTAA	4 cut(s)	212, 324, 711, 950
TscAI	CASTG	1 cut(s)	753
TseFI	GTSAC	1 cut(s)	852
Tsp45I	GTSAC	1 cut(s)	852
TspDTI	ATGAA	4 cut(s)	282, 329, 819, 993
TspGWI	ACGGA	3 cut(s)	246, 489, 906
TspRI	CASTG	1 cut(s)	753
VneI	GTGCAC	1 cut(s)	523
VpaK11BI	GGWCC	1 cut(s)	600
XapI	RAATTY	2 cut(s)	533, 995
XceI	RCATGY	1 cut(s)	627
XmnI	GAANNNNTTC	1 cut(s)	336
XspI	CTAG	1 cut(s)	426
Zsp2I	ATGCAT	1 cut(s)	463

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.