Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001136

Physical Location & Seq

Genomic Coordinates Reverse (-)

12131285 .. 12133882

Gene Structure 2598 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G086600.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 657 bp

ATGGCTGCTCCTGCCGTAGATGCTCCTGTCGCAGCTGCTCCTGTCGTAGTTGCTTCTGTTGTGGAACCAACGGAGCCTCACTTTGACGTGAAGCTGTTCAACCGCTGGAGCTTTGATGATGTTCAGGTCAGTGACATTTCATTGGCAGACTATGTTGGAGTGGTACCTGCCAAGCATGCAACCTATGTGCCTCACACTGCTGGGAGATACTCAGTCAAACGATTCAGGAAGGCTCAGTGCCCTATTGTGGAGAGGCTTACTAACTCACTCATGATGCACGGCAGAAACAATGGAAAGAAACTCATGGCTGTCAGGATTATTAGGCATGCTATGGAAATTATCCATTTGCTGACTGATCAGAACCCCATTCAAGTTATTGTTGATGCTGTTGTTAATAGTGGTCCACGTGAAGATGCAACTCGTATTGGATCTGCTGGAGTTGTTAGGCGTCAGGCTGTGGATATCTCACCTTTGAGACGTGTGAATCAAGCTATCTATCTCCTCACAACTGGTGCTCGTGAGTCTGCTTTTAGAAACATCAAAACTATTGCAGAATGTTTGGCTGATGAACTTATTAATGCTGCCAAAGGTTCCTCTAACAGTTATGCGATCAAGAAGAAGGATGAGATTGAAAGAGTTGCCAAGGCCAACCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000028 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0005911 GO:0006412 GO:0006518 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009507 GO:0009536 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0010033 GO:0010467 GO:0015935 GO:0016020 GO:0016043 GO:0019538 GO:0019843 GO:0022607 GO:0022613 GO:0022618 GO:0022626 GO:0022627 GO:0030054 GO:0030312 GO:0031090 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0042221 GO:0042254 GO:0042255 GO:0042274 GO:0042788 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043603 GO:0043604 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0050896 GO:0055044 GO:0065003 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0071944 GO:0097159 GO:0098588 GO:0098805 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_S7

Protein Analysis

219

Amino Acids

23.92

Weight (kDa)

9.65

Isoelectric Point (pI)

42.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001136)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37270 AT2G37270 AT3G11940 AT3G11940
fragaria_vesca	FvH4_2g26500 FvH4_3g33535 FvH4_4g10002 FvH4_5g31441 FvH4_6g14761 FvH4_6g21310 FvH4_6g21310
malus_domestica	MD04G1033100.v1.1 MD12G1044700.v1.1 MD12G1049500.v1.1 MD12G1049600.v1.1 MD14G1043500.v1.1 MD14G1048400.v1.1 MD14G1048600.v1.1
prunus_persica	Prupe.1G502000_v2.0.a1 Prupe.7G086600_v2.0.a1 Prupe.7G086600_v2.0.a1 Prupe.7G086600_v2.0.a1 Prupe.7G086600_v2.0.a1 Prupe.7G086700_v2.0.a1 Prupe.7G086700_v2.0.a1
pyrus_communis	pycom04g02720 pycom12g03850 pycom13g28970 pycom14g00940 pycom14g03700
rosa_chinensis	RchiOBHm_Chr0c36g0502911 RchiOBHm_Chr2g0129001 RchiOBHm_Chr3g0477901 RchiOBHm_Chr6g0295301
rosa_laevigata	RLG00000011814 RLG00000023680
rosa_multiflora	Rmu_co8311483.1_g000001 Rmu_sc0005991.1_g000014 Rmu_sc0007232.1_g000007
rosa_roxburghii	Rroxscaffold_171G00441470 Rroxscaffold_4G00298910 Rroxscaffold_6G00403610 Rroxscaffold_7G00172590
rosa_rugosa	Rorug01G0206000 Rorug03G0163800 Rorug03G0163800 Rorug06G0250000
rosa_samantha	Rh3CG242100 Rh3DG241400 Rh6AG363100 Rh6BG371100 Rh6CG377700 Rh6DG363800
rosa_wichuraiana	Rw0G008510 Rw2G027230 Rw3G019340 Rw6G026660 Rw6G031680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	175
Acc65I	GGTACC	1 cut(s)	163
AccB1I	GGYRCC	1 cut(s)	163
AciI	CCGC	1 cut(s)	103
AclWI	GGATC	1 cut(s)	436
AcvI	CACGTG	1 cut(s)	407
AcyI	GRCGYC	1 cut(s)	448
AfaI	GTAC	1 cut(s)	165
AfiI	CCNNNNNNNGG	1 cut(s)	247
AflIII	ACRYGT	1 cut(s)	478
AgsI	TTSAA	3 cut(s)	100, 371, 632
AjiI	CACGTC	2 cut(s)	88, 479
AluBI	AGCT	4 cut(s)	35, 94, 111, 491
AluI	AGCT	4 cut(s)	35, 94, 111, 491
Alw21I	GWGCWC	1 cut(s)	517
Alw26I	GTCTC	1 cut(s)	469
AlwI	GGATC	1 cut(s)	436
AoxI	GGCC	1 cut(s)	645
ApeKI	GCWGC	4 cut(s)	5, 32, 35, 581
AseI	ATTAAT	1 cut(s)	576
Asp700I	GAANNNNTTC	1 cut(s)	95
Asp718I	GGTACC	1 cut(s)	163
AspS9I	GGNCC	1 cut(s)	401
AsuHPI	GGTGA	1 cut(s)	459
AvaII	GGWCC	1 cut(s)	401
BaeGI	GKGCMC	1 cut(s)	242
BanI	GGYRCC	1 cut(s)	163
BauI	CACGAG	1 cut(s)	516
BbrPI	CACGTG	1 cut(s)	407
Bbv12I	GWGCWC	1 cut(s)	517
BbvI	GCAGC	3 cut(s)	22, 44, 568
BceAI	ACGGC	1 cut(s)	295
BclI	TGATCA	1 cut(s)	355
BcoDI	GTCTC	1 cut(s)	469
BfuAI	ACCTGC	1 cut(s)	175
BisI	GCNGC	4 cut(s)	6, 33, 36, 582
BlsI	GCNGC	4 cut(s)	7, 34, 37, 583
Bme18I	GGWCC	1 cut(s)	401
BmgBI	CACGTC	2 cut(s)	88, 479
BmgT120I	GGNCC	1 cut(s)	401
BmiI	GGNNCC	4 cut(s)	66, 75, 165, 592
BmsI	GCATC	4 cut(s)	10, 264, 373, 403
BpmI	CTGGAG	2 cut(s)	127, 456
BsaAI	YACGTR	1 cut(s)	407
BsaHI	GRCGYC	1 cut(s)	448
BsaJI	CCNNGG	1 cut(s)	642
Bsc4I	CCNNNNNNNGG	1 cut(s)	247
Bse1I	ACTGG	1 cut(s)	514
BseDI	CCNNGG	1 cut(s)	642
BseGI	GGATG	1 cut(s)	628
BseLI	CCNNNNNNNGG	1 cut(s)	247
BseMII	CTCAG	2 cut(s)	225, 248
BseNI	ACTGG	1 cut(s)	514
BseRI	GAGGAG	1 cut(s)	491
BseSI	GKGCMC	1 cut(s)	242
BseXI	GCAGC	3 cut(s)	22, 44, 568
BseYI	CCCAGC	1 cut(s)	200
BshFI	GGCC	1 cut(s)	647
BshNI	GGYRCC	1 cut(s)	163
BsiHKAI	GWGCWC	1 cut(s)	517
BslI	CCNNNNNNNGG	1 cut(s)	247
BsmAI	GTCTC	1 cut(s)	469
BsmBI	CGTCTC	1 cut(s)	469
BsnI	GGCC	1 cut(s)	647
Bsp1286I	GDGCHC	2 cut(s)	242, 517
Bsp143I	GATC	3 cut(s)	355, 428, 609
BspACI	CCGC	1 cut(s)	103
BspANI	GGCC	1 cut(s)	647
BspCNI	CTCAG	2 cut(s)	224, 247
BspHI	TCATGA	1 cut(s)	270
BspLI	GGNNCC	4 cut(s)	66, 75, 165, 592
BspMI	ACCTGC	1 cut(s)	175
BspPI	GGATC	1 cut(s)	436
BspT107I	GGYRCC	1 cut(s)	163
BsrI	ACTGG	1 cut(s)	514
BssECI	CCNNGG	1 cut(s)	642
BssMI	GATC	3 cut(s)	355, 428, 609
BssNI	GRCGYC	1 cut(s)	448
BssSI	CACGAG	1 cut(s)	516
BssT1I	CCWWGG	1 cut(s)	642
Bst2BI	CACGAG	1 cut(s)	516
Bst4CI	ACNGT	2 cut(s)	602, 653
BstACI	GRCGYC	1 cut(s)	448
BstBAI	YACGTR	1 cut(s)	407
BstC8I	GCNNGC	2 cut(s)	177, 327
BstDEI	CTNAG	2 cut(s)	211, 234
BstF5I	GGATG	1 cut(s)	628
BstKTI	GATC	3 cut(s)	358, 431, 612
BstMAI	GTCTC	1 cut(s)	469
BstMBI	GATC	3 cut(s)	355, 428, 609
BstMWI	GCNNNNNNNGC	4 cut(s)	11, 20, 29, 176
BstNSI	RCATGY	2 cut(s)	179, 329
BstSLI	GKGCMC	1 cut(s)	242
BstV1I	GCAGC	3 cut(s)	22, 44, 568
BstX2I	RGATCY	1 cut(s)	428
BstYI	RGATCY	1 cut(s)	428
BsuRI	GGCC	1 cut(s)	647
BtrI	CACGTC	2 cut(s)	88, 479
BtsCI	GGATG	1 cut(s)	628
BtsI	GCAGTG	1 cut(s)	195
BtsIMutI	CAGTG	3 cut(s)	136, 195, 242
BveI	ACCTGC	1 cut(s)	175
Cac8I	GCNNGC	2 cut(s)	177, 327
CciI	TCATGA	1 cut(s)	270
Cfr13I	GGNCC	1 cut(s)	401
CseI	GACGC	1 cut(s)	437
Csp6I	GTAC	1 cut(s)	164
CviAII	CATG	4 cut(s)	176, 271, 304, 326
CviQI	GTAC	1 cut(s)	164
DdeI	CTNAG	2 cut(s)	211, 234
DpnI	GATC	3 cut(s)	357, 430, 611
DpnII	GATC	3 cut(s)	355, 428, 609
Eco130I	CCWWGG	1 cut(s)	642
Eco32I	GATATC	1 cut(s)	463
Eco47I	GGWCC	1 cut(s)	401
Eco72I	CACGTG	1 cut(s)	407
EcoRV	GATATC	1 cut(s)	463
EcoT14I	CCWWGG	1 cut(s)	642
ErhI	CCWWGG	1 cut(s)	642
Esp3I	CGTCTC	1 cut(s)	469
FaeI	CATG	4 cut(s)	179, 274, 307, 329
FaiI	YATR	8 cut(s)	153, 177, 186, 272, 305, 327, 332, 606
FatI	CATG	4 cut(s)	175, 270, 303, 325
FbaI	TGATCA	1 cut(s)	355
Fnu4HI	GCNGC	4 cut(s)	6, 33, 36, 582
FokI	GGATG	1 cut(s)	635
Fsp4HI	GCNGC	4 cut(s)	6, 33, 36, 582
GluI	GCNGC	4 cut(s)	6, 33, 36, 582
GsaI	CCCAGC	1 cut(s)	204
GsuI	CTGGAG	2 cut(s)	127, 456
HaeIII	GGCC	1 cut(s)	647
HgaI	GACGC	1 cut(s)	437
Hin1I	GRCGYC	1 cut(s)	448
Hin1II	CATG	4 cut(s)	179, 274, 307, 329
HinfI	GANTC	3 cut(s)	222, 484, 521
HphI	GGTGA	1 cut(s)	459
Hpy166II	GTNNAC	1 cut(s)	404
Hpy188I	TCNGA	1 cut(s)	360
Hpy188III	TCNNGA	5 cut(s)	226, 271, 313, 518, 613
Hpy8I	GTNNAC	1 cut(s)	404
HpyAV	CCTTC	2 cut(s)	223, 613
HpyCH4III	ACNGT	2 cut(s)	602, 653
HpyCH4IV	ACGT	3 cut(s)	87, 406, 478
HpyCH4V	TGCA	4 cut(s)	179, 277, 416, 551
HpyF10VI	GCNNNNNNNGC	4 cut(s)	11, 20, 29, 176
HpyF3I	CTNAG	2 cut(s)	211, 234
HpySE526I	ACGT	3 cut(s)	87, 406, 478
Hsp92I	GRCGYC	1 cut(s)	448
Hsp92II	CATG	4 cut(s)	179, 274, 307, 329
KpnI	GGTACC	1 cut(s)	167
Ksp22I	TGATCA	1 cut(s)	355
Kzo9I	GATC	3 cut(s)	355, 428, 609
LmnI	GCTCC	5 cut(s)	13, 28, 43, 73, 108
Lsp1109I	GCAGC	3 cut(s)	22, 44, 568
LweI	GCATC	4 cut(s)	10, 264, 373, 403
MaeII	ACGT	3 cut(s)	87, 406, 478
MaeIII	GTNAC	1 cut(s)	131
MalI	GATC	3 cut(s)	357, 430, 611
MboI	GATC	3 cut(s)	355, 428, 609
MboII	GAAGA	2 cut(s)	422, 628
MflI	RGATCY	1 cut(s)	428
MhlI	GDGCHC	2 cut(s)	242, 517
MluCI	AATT	1 cut(s)	336
MlyI	GAGTC	1 cut(s)	530
MmeI	TCCRAC	1 cut(s)	136
MnlI	CCTC	5 cut(s)	87, 201, 246, 512, 604
MroXI	GAANNNNTTC	1 cut(s)	95
MseI	TTAA	2 cut(s)	393, 576
MspA1I	CMGCKG	2 cut(s)	35, 105
MwoI	GCNNNNNNNGC	4 cut(s)	11, 20, 29, 176
NdeII	GATC	3 cut(s)	355, 428, 609
NlaIII	CATG	4 cut(s)	179, 274, 307, 329
NlaIV	GGNNCC	4 cut(s)	66, 75, 165, 592
NmuCI	GTSAC	1 cut(s)	131
NspI	RCATGY	2 cut(s)	179, 329
PaeI	GCATGC	2 cut(s)	179, 329
PagI	TCATGA	1 cut(s)	270
PdmI	GAANNNNTTC	1 cut(s)	95
PfeI	GAWTC	2 cut(s)	222, 484
PkrI	GCNGC	4 cut(s)	7, 34, 37, 583
PleI	GAGTC	1 cut(s)	529
PmaCI	CACGTG	1 cut(s)	407
PmlI	CACGTG	1 cut(s)	407
PpsI	GAGTC	1 cut(s)	529
Ppu21I	YACGTR	1 cut(s)	407
PshBI	ATTAAT	1 cut(s)	576
PspCI	CACGTG	1 cut(s)	407
PspFI	CCCAGC	1 cut(s)	200
PspN4I	GGNNCC	4 cut(s)	66, 75, 165, 592
PspPI	GGNCC	1 cut(s)	401
PsuI	RGATCY	1 cut(s)	428
PvuII	CAGCTG	1 cut(s)	35
RsaI	GTAC	1 cut(s)	165
RsaNI	GTAC	1 cut(s)	164
SaqAI	TTAA	2 cut(s)	393, 576
SatI	GCNGC	4 cut(s)	6, 33, 36, 582
Sau3AI	GATC	3 cut(s)	355, 428, 609
Sau96I	GGNCC	1 cut(s)	401
SchI	GAGTC	1 cut(s)	530
SduI	GDGCHC	2 cut(s)	242, 517
SfaNI	GCATC	4 cut(s)	10, 264, 373, 403
SinI	GGWCC	1 cut(s)	401
SphI	GCATGC	2 cut(s)	179, 329
Sse9I	AATT	1 cut(s)	336
SsiI	CCGC	1 cut(s)	103
StyI	CCWWGG	1 cut(s)	642
TaaI	ACNGT	2 cut(s)	602, 653
TaiI	ACGT	3 cut(s)	90, 409, 481
TasI	AATT	1 cut(s)	336
TfiI	GAWTC	2 cut(s)	222, 484
Tru1I	TTAA	2 cut(s)	393, 576
Tru9I	TTAA	2 cut(s)	393, 576
TscAI	CASTG	3 cut(s)	136, 202, 242
TseFI	GTSAC	1 cut(s)	131
TseI	GCWGC	4 cut(s)	5, 32, 35, 581
Tsp45I	GTSAC	1 cut(s)	131
TspDTI	ATGAA	2 cut(s)	129, 582
TspGWI	ACGGA	1 cut(s)	86
TspRI	CASTG	3 cut(s)	136, 202, 242
VpaK11BI	GGWCC	1 cut(s)	401
VspI	ATTAAT	1 cut(s)	576
XceI	RCATGY	2 cut(s)	179, 329
XmnI	GAANNNNTTC	1 cut(s)	95

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.