Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001136

Physical Location & Seq

Genomic Coordinates Reverse (-)

12135227 .. 12137962

Gene Structure 2736 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G086700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 645 bp

ATGTCTGTTGCAGTGGAACCAACGGCACCAACGGCACCAACGGTACAAACGGTACCAATTGAGCCTCACCTTGACGTGAAGCTGTTCAACCGCTGGAGCTTCGATGATGTTCAGGTCAGTGACATTTCACTGGCGGACTATGTTGGAGTTGTCCCAGCCAAGCATGCAACTTATGTACCTCACACTGCCGGGAGGTACTCAGTCAAACGATTCAGGAAAGCCCAGTGCCCTATAGTGGAGAGGCTTACAAACTCACTCATGATGCATGGCAGGAACAATGGGAAGAAACTTATGGCTGTAAGGATCATTAGGCATGCAATGGAAATTATCCATTTGCTGACTGATCAGAATCCCATTCAAATTATTGTTGACGCTGTTGTTAATAGTGGTCCACGAGAAGATGCAACTCGTATTGGATCTGCTGGAGTTGTTAGGCGTCAGGCTGTGGATATTTCACCTTTGAGACGCGTGAATCAGGCTATCTATCTCCTTACAACTGGTGCTCGTGAATCTGCTTTTAGAAACATCAAAACTATTGCAGAATGTTTGGCCGACGAACTGATTAATGCTGCAAAAGGTTCATCTAATAGTTACGCTATAAAGAAGAAGGATGAGATTGAAAGAGTTGCCAAGGCCAACCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000028 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0005911 GO:0006412 GO:0006518 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009507 GO:0009536 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0010033 GO:0010467 GO:0015935 GO:0016020 GO:0016043 GO:0019538 GO:0019843 GO:0022607 GO:0022613 GO:0022618 GO:0022626 GO:0022627 GO:0030054 GO:0030312 GO:0031090 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0042221 GO:0042254 GO:0042255 GO:0042274 GO:0042788 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043603 GO:0043604 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0050896 GO:0055044 GO:0065003 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0071944 GO:0097159 GO:0098588 GO:0098805 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_S7

Protein Analysis

215

Amino Acids

23.67

Weight (kDa)

9.76

Isoelectric Point (pI)

43.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001136)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37270 AT2G37270 AT3G11940 AT3G11940
fragaria_vesca	FvH4_2g26500 FvH4_3g33535 FvH4_4g10002 FvH4_5g31441 FvH4_6g14761 FvH4_6g21310 FvH4_6g21310
malus_domestica	MD04G1033100.v1.1 MD12G1044700.v1.1 MD12G1049500.v1.1 MD12G1049600.v1.1 MD14G1043500.v1.1 MD14G1048400.v1.1 MD14G1048600.v1.1
prunus_persica	Prupe.1G502000_v2.0.a1 Prupe.7G086600_v2.0.a1 Prupe.7G086600_v2.0.a1 Prupe.7G086600_v2.0.a1 Prupe.7G086600_v2.0.a1 Prupe.7G086700_v2.0.a1 Prupe.7G086700_v2.0.a1
pyrus_communis	pycom04g02720 pycom12g03850 pycom13g28970 pycom14g00940 pycom14g03700
rosa_chinensis	RchiOBHm_Chr0c36g0502911 RchiOBHm_Chr2g0129001 RchiOBHm_Chr3g0477901 RchiOBHm_Chr6g0295301
rosa_laevigata	RLG00000011814 RLG00000023680
rosa_multiflora	Rmu_co8311483.1_g000001 Rmu_sc0005991.1_g000014 Rmu_sc0007232.1_g000007
rosa_roxburghii	Rroxscaffold_171G00441470 Rroxscaffold_4G00298910 Rroxscaffold_6G00403610 Rroxscaffold_7G00172590
rosa_rugosa	Rorug01G0206000 Rorug03G0163800 Rorug03G0163800 Rorug06G0250000
rosa_samantha	Rh3CG242100 Rh3DG241400 Rh6AG363100 Rh6BG371100 Rh6CG377700 Rh6DG363800
rosa_wichuraiana	Rw0G008510 Rw2G027230 Rw3G019340 Rw6G026660 Rw6G031680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	52
AccB1I	GGYRCC	3 cut(s)	25, 34, 52
AccII	CGCG	1 cut(s)	468
AciI	CCGC	2 cut(s)	91, 134
AclWI	GGATC	2 cut(s)	311, 424
AcoI	YGGCCR	1 cut(s)	549
AcyI	GRCGYC	1 cut(s)	436
AfaI	GTAC	4 cut(s)	45, 54, 177, 197
AfiI	CCNNNNNNNGG	1 cut(s)	235
AflIII	ACRYGT	1 cut(s)	466
AgsI	TTSAA	3 cut(s)	88, 359, 620
AjiI	CACGTC	1 cut(s)	76
AluBI	AGCT	2 cut(s)	82, 99
AluI	AGCT	2 cut(s)	82, 99
Alw21I	GWGCWC	1 cut(s)	505
Alw26I	GTCTC	1 cut(s)	457
AlwI	GGATC	2 cut(s)	311, 424
AoxI	GGCC	2 cut(s)	549, 633
ApeKI	GCWGC	1 cut(s)	569
AseI	ATTAAT	1 cut(s)	564
Asp700I	GAANNNNTTC	1 cut(s)	83
Asp718I	GGTACC	1 cut(s)	52
AspS9I	GGNCC	1 cut(s)	389
AsuC2I	CCSGG	1 cut(s)	190
AsuHPI	GGTGA	2 cut(s)	59, 447
AvaII	GGWCC	1 cut(s)	389
BaeGI	GKGCMC	1 cut(s)	230
BaeI	ACNNNNGTAYC	2 cut(s)	159, 192
BanI	GGYRCC	3 cut(s)	25, 34, 52
BauI	CACGAG	2 cut(s)	393, 504
Bbv12I	GWGCWC	1 cut(s)	505
BbvI	GCAGC	1 cut(s)	556
BceAI	ACGGC	2 cut(s)	39, 48
BclI	TGATCA	1 cut(s)	343
BcnI	CCSGG	1 cut(s)	190
BcoDI	GTCTC	1 cut(s)	457
BfmI	CTRYAG	1 cut(s)	231
BisI	GCNGC	1 cut(s)	570
BlsI	GCNGC	1 cut(s)	571
Bme1390I	CCNGG	1 cut(s)	190
Bme18I	GGWCC	1 cut(s)	389
BmgBI	CACGTC	1 cut(s)	76
BmgT120I	GGNCC	1 cut(s)	389
BmiI	GGNNCC	4 cut(s)	18, 27, 36, 54
BmrFI	CCNGG	1 cut(s)	190
BmrI	ACTGGG	1 cut(s)	217
BmsI	GCATC	2 cut(s)	252, 391
BmuI	ACTGGG	1 cut(s)	217
BpmI	CTGGAG	2 cut(s)	115, 444
BpuMI	CCSGG	1 cut(s)	190
BsaBI	GATNNNNATC	1 cut(s)	348
BsaHI	GRCGYC	1 cut(s)	436
BsaJI	CCNNGG	1 cut(s)	630
Bsc4I	CCNNNNNNNGG	1 cut(s)	235
Bse1I	ACTGG	3 cut(s)	135, 223, 502
Bse3DI	GCAATG	1 cut(s)	324
Bse8I	GATNNNNATC	1 cut(s)	348
BseDI	CCNNGG	1 cut(s)	630
BseGI	GGATG	1 cut(s)	616
BseJI	GATNNNNATC	1 cut(s)	348
BseLI	CCNNNNNNNGG	1 cut(s)	235
BseMI	GCAATG	1 cut(s)	324
BseMII	CTCAG	1 cut(s)	213
BseNI	ACTGG	3 cut(s)	135, 223, 502
BseSI	GKGCMC	1 cut(s)	230
BseXI	GCAGC	1 cut(s)	556
BseYI	CCCAGC	1 cut(s)	154
Bsh1236I	CGCG	1 cut(s)	468
BshFI	GGCC	2 cut(s)	551, 635
BshNI	GGYRCC	3 cut(s)	25, 34, 52
BsiHKAI	GWGCWC	1 cut(s)	505
BsiSI	CCGG	1 cut(s)	189
BslFI	GGGAC	1 cut(s)	137
BslI	CCNNNNNNNGG	1 cut(s)	235
BsmAI	GTCTC	1 cut(s)	457
BsmBI	CGTCTC	1 cut(s)	457
BsmFI	GGGAC	1 cut(s)	137
BsnI	GGCC	2 cut(s)	551, 635
Bsp1286I	GDGCHC	2 cut(s)	230, 505
Bsp143I	GATC	3 cut(s)	303, 343, 416
BspACI	CCGC	2 cut(s)	91, 134
BspANI	GGCC	2 cut(s)	551, 635
BspCNI	CTCAG	1 cut(s)	212
BspFNI	CGCG	1 cut(s)	468
BspHI	TCATGA	1 cut(s)	258
BspLI	GGNNCC	4 cut(s)	18, 27, 36, 54
BspPI	GGATC	2 cut(s)	311, 424
BspT107I	GGYRCC	3 cut(s)	25, 34, 52
BsrDI	GCAATG	1 cut(s)	324
BsrI	ACTGG	3 cut(s)	135, 223, 502
BssECI	CCNNGG	1 cut(s)	630
BssMI	GATC	3 cut(s)	303, 343, 416
BssNI	GRCGYC	1 cut(s)	436
BssSI	CACGAG	2 cut(s)	393, 504
BssT1I	CCWWGG	1 cut(s)	630
Bst2BI	CACGAG	2 cut(s)	393, 504
Bst4CI	ACNGT	3 cut(s)	43, 52, 641
BstACI	GRCGYC	1 cut(s)	436
BstC8I	GCNNGC	2 cut(s)	165, 315
BstDEI	CTNAG	1 cut(s)	199
BstF5I	GGATG	1 cut(s)	616
BstFNI	CGCG	1 cut(s)	468
BstKTI	GATC	3 cut(s)	306, 346, 419
BstMAI	GTCTC	1 cut(s)	457
BstMBI	GATC	3 cut(s)	303, 343, 416
BstMWI	GCNNNNNNNGC	2 cut(s)	32, 164
BstNSI	RCATGY	2 cut(s)	167, 317
BstSCI	CCNGG	1 cut(s)	188
BstSFI	CTRYAG	1 cut(s)	231
BstSLI	GKGCMC	1 cut(s)	230
BstUI	CGCG	1 cut(s)	468
BstV1I	GCAGC	1 cut(s)	556
BstX2I	RGATCY	1 cut(s)	416
BstYI	RGATCY	1 cut(s)	416
BsuRI	GGCC	2 cut(s)	551, 635
BtrI	CACGTC	1 cut(s)	76
BtsCI	GGATG	1 cut(s)	616
BtsI	GCAGTG	2 cut(s)	18, 183
BtsIMutI	CAGTG	5 cut(s)	18, 124, 128, 183, 230
Cac8I	GCNNGC	2 cut(s)	165, 315
CciI	TCATGA	1 cut(s)	258
Cfr13I	GGNCC	1 cut(s)	389
CseI	GACGC	3 cut(s)	380, 425, 474
Csp6I	GTAC	4 cut(s)	44, 53, 176, 196
CviAII	CATG	4 cut(s)	164, 259, 266, 314
CviQI	GTAC	4 cut(s)	44, 53, 176, 196
DdeI	CTNAG	1 cut(s)	199
DpnI	GATC	3 cut(s)	305, 345, 418
DpnII	GATC	3 cut(s)	303, 343, 416
EaeI	YGGCCR	1 cut(s)	549
EciI	GGCGGA	1 cut(s)	149
Eco130I	CCWWGG	1 cut(s)	630
Eco47I	GGWCC	1 cut(s)	389
EcoT14I	CCWWGG	1 cut(s)	630
EcoT22I	ATGCAT	1 cut(s)	267
ErhI	CCWWGG	1 cut(s)	630
Esp3I	CGTCTC	1 cut(s)	457
FaeI	CATG	4 cut(s)	167, 262, 269, 317
FaiI	YATR	9 cut(s)	141, 165, 174, 233, 260, 267, 293, 315, 599
FaqI	GGGAC	1 cut(s)	137
FatI	CATG	4 cut(s)	163, 258, 265, 313
FbaI	TGATCA	1 cut(s)	343
Fnu4HI	GCNGC	1 cut(s)	570
FokI	GGATG	1 cut(s)	623
Fsp4HI	GCNGC	1 cut(s)	570
GluI	GCNGC	1 cut(s)	570
GsaI	CCCAGC	1 cut(s)	158
GsuI	CTGGAG	2 cut(s)	115, 444
HaeIII	GGCC	2 cut(s)	551, 635
HapII	CCGG	1 cut(s)	189
HgaI	GACGC	3 cut(s)	380, 425, 474
Hin1I	GRCGYC	1 cut(s)	436
Hin1II	CATG	4 cut(s)	167, 262, 269, 317
HincII	GTYRAC	1 cut(s)	370
HindII	GTYRAC	1 cut(s)	370
HinfI	GANTC	4 cut(s)	210, 349, 472, 509
HpaII	CCGG	1 cut(s)	189
HphI	GGTGA	2 cut(s)	59, 447
Hpy166II	GTNNAC	2 cut(s)	370, 392
Hpy188I	TCNGA	1 cut(s)	348
Hpy188III	TCNNGA	3 cut(s)	214, 259, 506
Hpy8I	GTNNAC	2 cut(s)	370, 392
Hpy99I	CGWCG	1 cut(s)	557
HpyAV	CCTTC	1 cut(s)	601
HpyCH4III	ACNGT	3 cut(s)	43, 52, 641
HpyCH4IV	ACGT	1 cut(s)	75
HpyCH4V	TGCA	7 cut(s)	11, 167, 265, 317, 404, 539, 572
HpyF10VI	GCNNNNNNNGC	2 cut(s)	32, 164
HpyF3I	CTNAG	1 cut(s)	199
HpySE526I	ACGT	1 cut(s)	75
Hsp92I	GRCGYC	1 cut(s)	436
Hsp92II	CATG	4 cut(s)	167, 262, 269, 317
KpnI	GGTACC	1 cut(s)	56
Ksp22I	TGATCA	1 cut(s)	343
Kzo9I	GATC	3 cut(s)	303, 343, 416
LmnI	GCTCC	1 cut(s)	96
Lsp1109I	GCAGC	1 cut(s)	556
LweI	GCATC	2 cut(s)	252, 391
MaeII	ACGT	1 cut(s)	75
MaeIII	GTNAC	2 cut(s)	119, 590
MalI	GATC	3 cut(s)	305, 345, 418
MboI	GATC	3 cut(s)	303, 343, 416
MboII	GAAGA	3 cut(s)	295, 410, 616
MfeI	CAATTG	1 cut(s)	57
MflI	RGATCY	1 cut(s)	416
MhlI	GDGCHC	2 cut(s)	230, 505
MluCI	AATT	3 cut(s)	57, 324, 360
MluI	ACGCGT	1 cut(s)	466
MmeI	TCCRAC	1 cut(s)	124
MnlI	CCTC	4 cut(s)	75, 186, 189, 234
Mph1103I	ATGCAT	1 cut(s)	267
MroXI	GAANNNNTTC	1 cut(s)	83
MseI	TTAA	2 cut(s)	381, 564
MspA1I	CMGCKG	1 cut(s)	93
MspI	CCGG	1 cut(s)	189
MspR9I	CCNGG	1 cut(s)	190
MunI	CAATTG	1 cut(s)	57
MvnI	CGCG	1 cut(s)	468
MwoI	GCNNNNNNNGC	2 cut(s)	32, 164
NciI	CCSGG	1 cut(s)	190
NdeII	GATC	3 cut(s)	303, 343, 416
NlaIII	CATG	4 cut(s)	167, 262, 269, 317
NlaIV	GGNNCC	4 cut(s)	18, 27, 36, 54
NmuCI	GTSAC	1 cut(s)	119
NsiI	ATGCAT	1 cut(s)	267
NspI	RCATGY	2 cut(s)	167, 317
PaeI	GCATGC	2 cut(s)	167, 317
PagI	TCATGA	1 cut(s)	258
PdmI	GAANNNNTTC	1 cut(s)	83
PfeI	GAWTC	4 cut(s)	210, 349, 472, 509
PkrI	GCNGC	1 cut(s)	571
PshBI	ATTAAT	1 cut(s)	564
PspFI	CCCAGC	1 cut(s)	154
PspN4I	GGNNCC	4 cut(s)	18, 27, 36, 54
PspPI	GGNCC	1 cut(s)	389
PsuI	RGATCY	1 cut(s)	416
RsaI	GTAC	4 cut(s)	45, 54, 177, 197
RsaNI	GTAC	4 cut(s)	44, 53, 176, 196
SaqAI	TTAA	2 cut(s)	381, 564
SatI	GCNGC	1 cut(s)	570
Sau3AI	GATC	3 cut(s)	303, 343, 416
Sau96I	GGNCC	1 cut(s)	389
ScrFI	CCNGG	1 cut(s)	190
SduI	GDGCHC	2 cut(s)	230, 505
SetI	ASST	9 cut(s)	72, 78, 84, 101, 117, 181, 197, 460, 580
SfaNI	GCATC	2 cut(s)	252, 391
SfcI	CTRYAG	1 cut(s)	231
SinI	GGWCC	1 cut(s)	389
SphI	GCATGC	2 cut(s)	167, 317
Sse9I	AATT	3 cut(s)	57, 324, 360
SsiI	CCGC	2 cut(s)	91, 134
StyD4I	CCNGG	1 cut(s)	188
StyI	CCWWGG	1 cut(s)	630
TaaI	ACNGT	3 cut(s)	43, 52, 641
TaiI	ACGT	1 cut(s)	78
TaqI	TCGA	1 cut(s)	102
TasI	AATT	3 cut(s)	57, 324, 360
TfiI	GAWTC	4 cut(s)	210, 349, 472, 509
Tru1I	TTAA	2 cut(s)	381, 564
Tru9I	TTAA	2 cut(s)	381, 564
TscAI	CASTG	5 cut(s)	18, 124, 135, 190, 230
TseFI	GTSAC	1 cut(s)	119
TseI	GCWGC	1 cut(s)	569
Tsp45I	GTSAC	1 cut(s)	119
TspDTI	ATGAA	1 cut(s)	570
TspRI	CASTG	5 cut(s)	18, 124, 135, 190, 230
VpaK11BI	GGWCC	1 cut(s)	389
VspI	ATTAAT	1 cut(s)	564
XceI	RCATGY	2 cut(s)	167, 317
XmnI	GAANNNNTTC	1 cut(s)	83
Zsp2I	ATGCAT	1 cut(s)	267

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.