Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0003126

Physical Location & Seq

Genomic Coordinates Forward (+)

12513067 .. 12514533

Gene Structure 1467 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G092600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 738 bp

ATGGCGGTTGTTGGCCCATGGACGACGAGGAGCTTGATCATCGCGATAATGATGATGACCACGACGGTGCGTTTAATTGACGGCAGCAACAACAACCACGTGTACTCTCCGTGCGCGGACACGAAGGTGGAGAGGTCCGACGGGTTCACCTTCGGGATTGCCTTCGCATCCAGGGACTCCTTCTTCCGAAACGGCAGCGTTCAGCTGTCTCCCTGCGACTCCAGACTCTCTCTCTCCAACGGCAATTCCCAGATCTCCGTTTTCCGCCCCAAGGTTGACGAGATCTCTCTCCTCTCTGTCAACTCCTCCTCCTTCACTGCGGATTCTTATGGCTATATGGTTGCATTTGCTGGGAGAAAATATGCTGCAAGGTCCATTCCTGCTTTTGTTGCCAATGCTACCTACACTGTCACCAGCTTTACCCTTGTTCTTGAGTTCAACAAGGGGAGGCTGCAGAACCTGTATTGGAAAAGGGATGGGTGCTCCAAATGTTCAGGGAGCACCGGCCTTGTTTGCCTCAACAATCAGGACTGTGCATTCAAGACCTCCAGCTGCAAAACCCATGGAGGCTCTGTGGACTGCAGCCTTGGGATCCAATTGGCATTTTCCGGCACAGACAAGCACCTTTCAGTGCTTAACTCATGGTATGAAGTGGAAAACCTCAGGCAGTACTCACTCTATGGTCTTTATTCAAATTTGAAGGGCTCTCTCACTAGCCAGTTTGACAAGATTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

246

Amino Acids

26.88

Weight (kDa)

8.89

Isoelectric Point (pI)

28.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003126)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11800
fragaria_vesca	FvH4_6g20620
malus_domestica	MD02G1202900.v1.1 MD12G1042300.v1.1 MD14G1041500.v1.1
prunus_persica	Prupe.7G092600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr0c32g0501541 RchiOBHm_Chr1g0326381 RchiOBHm_Chr1g0343841 RchiOBHm_Chr2g0161561 RchiOBHm_Chr3g0476431 RchiOBHm_Chr3g0487051 RchiOBHm_Chr4g0411221 RchiOBHm_Chr5g0032531 RchiOBHm_Chr5g0056261 RchiOBHm_Chr6g0271161 RchiOBHm_Chr7g0226741
rosa_laevigata	RLG00000015405 RLG00000023767
rosa_multiflora	Rmu_co8287401.1_g000001 Rmu_sc0000744.1_g000072 Rmu_sc0004556.1_g000008
rosa_roxburghii	Rroxscaffold_5G00364840 Rroxscaffold_6G00405270
rosa_rugosa	Rorug03G0154400
rosa_samantha	Rh3AG205500 Rh3CG231700 Rh3DG231600 Rh4DG173300 Rh5DG274500 Rh6AG328100 Rh6CG188500
rosa_wichuraiana	Rw2G013950 Rw3G018690 Rw3G022480 Rw5G026690 Rw6G028540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	44, 116
AciI	CCGC	4 cut(s)	5, 116, 265, 320
AclWI	GGATC	2 cut(s)	586, 599
AcsI	RAATTY	1 cut(s)	694
AcvI	CACGTG	1 cut(s)	100
AfaI	GTAC	2 cut(s)	104, 671
AfiI	CCNNNNNNNGG	1 cut(s)	271
AflIII	ACRYGT	1 cut(s)	99
AgsI	TTSAA	4 cut(s)	439, 541, 693, 700
AjnI	CCWGG	1 cut(s)	170
AleI	CACNNNNGTG	2 cut(s)	65, 125
AluBI	AGCT	4 cut(s)	33, 205, 417, 552
AluI	AGCT	4 cut(s)	33, 205, 417, 552
Alw21I	GWGCWC	2 cut(s)	485, 503
Alw26I	GTCTC	1 cut(s)	213
AlwI	GGATC	2 cut(s)	586, 599
AlwNI	CAGNNNCTG	1 cut(s)	460
AoxI	GGCC	2 cut(s)	13, 505
ApeKI	GCWGC	6 cut(s)	84, 195, 365, 451, 552, 582
ApoI	RAATTY	1 cut(s)	694
AspLEI	GCGC	1 cut(s)	116
AspS9I	GGNCC	3 cut(s)	14, 135, 372
AsuHPI	GGTGA	2 cut(s)	139, 403
AvaII	GGWCC	2 cut(s)	135, 372
AxyI	CCTNAGG	1 cut(s)	662
BamHI	GGATCC	1 cut(s)	591
BanII	GRGCYC	1 cut(s)	707
BbrPI	CACGTG	1 cut(s)	100
Bbv12I	GWGCWC	2 cut(s)	485, 503
BbvI	GCAGC	6 cut(s)	96, 207, 352, 438, 539, 594
BccI	CCATC	1 cut(s)	470
BceAI	ACGGC	3 cut(s)	97, 208, 256
BciT130I	CCWGG	1 cut(s)	172
BclI	TGATCA	1 cut(s)	36
BcoDI	GTCTC	1 cut(s)	213
BfaI	CTAG	1 cut(s)	714
BfmI	CTRYAG	2 cut(s)	452, 580
BglII	AGATCT	2 cut(s)	252, 282
BisI	GCNGC	6 cut(s)	85, 196, 366, 452, 553, 583
BlsI	GCNGC	6 cut(s)	86, 197, 367, 453, 554, 584
BmcAI	AGTACT	1 cut(s)	671
Bme1390I	CCNGG	1 cut(s)	172
Bme18I	GGWCC	2 cut(s)	135, 372
BmgT120I	GGNCC	3 cut(s)	14, 135, 372
BmiI	GGNNCC	1 cut(s)	593
BmrFI	CCNGG	1 cut(s)	172
BmsI	GCATC	1 cut(s)	176
BpmI	CTGGAG	2 cut(s)	205, 532
BpuEI	CTTGAG	1 cut(s)	452
BsaAI	YACGTR	1 cut(s)	100
BsaJI	CCNNGG	5 cut(s)	17, 171, 270, 562, 586
BsaXI	ACNNNNNCTCC	4 cut(s)	293, 323, 558, 588
Bsc4I	CCNNNNNNNGG	1 cut(s)	271
Bse118I	RCCGGY	1 cut(s)	503
Bse1I	ACTGG	1 cut(s)	718
Bse21I	CCTNAGG	1 cut(s)	662
BseBI	CCWGG	1 cut(s)	172
BseDI	CCNNGG	5 cut(s)	17, 171, 270, 562, 586
BseGI	GGATG	2 cut(s)	167, 481
BseLI	CCNNNNNNNGG	1 cut(s)	271
BseMII	CTCAG	1 cut(s)	676
BseNI	ACTGG	1 cut(s)	718
BseRI	GAGGAG	4 cut(s)	43, 281, 295, 298
BseXI	GCAGC	6 cut(s)	96, 207, 352, 438, 539, 594
BseYI	CCCAGC	1 cut(s)	350
Bsh1236I	CGCG	2 cut(s)	44, 116
BshFI	GGCC	2 cut(s)	15, 507
BsiHKAI	GWGCWC	2 cut(s)	485, 503
BsiSI	CCGG	2 cut(s)	504, 609
BslFI	GGGAC	1 cut(s)	188
BslI	CCNNNNNNNGG	1 cut(s)	271
BsmAI	GTCTC	1 cut(s)	213
BsmFI	GGGAC	1 cut(s)	188
BsmI	GAATGC	1 cut(s)	536
BsnI	GGCC	2 cut(s)	15, 507
Bsp1286I	GDGCHC	3 cut(s)	485, 503, 707
Bsp143I	GATC	4 cut(s)	36, 252, 282, 591
Bsp19I	CCATGG	2 cut(s)	17, 562
Bsp68I	TCGCGA	1 cut(s)	44
BspACI	CCGC	4 cut(s)	5, 116, 265, 320
BspANI	GGCC	2 cut(s)	15, 507
BspCNI	CTCAG	1 cut(s)	675
BspFNI	CGCG	2 cut(s)	44, 116
BspLI	GGNNCC	1 cut(s)	593
BspMAI	CTGCAG	2 cut(s)	456, 584
BspPI	GGATC	2 cut(s)	586, 599
BsrFI	RCCGGY	1 cut(s)	503
BsrI	ACTGG	1 cut(s)	718
BssAI	RCCGGY	1 cut(s)	503
BssECI	CCNNGG	5 cut(s)	17, 171, 270, 562, 586
BssMI	GATC	4 cut(s)	36, 252, 282, 591
BssT1I	CCWWGG	4 cut(s)	17, 270, 562, 586
Bst2UI	CCWGG	1 cut(s)	172
Bst4CI	ACNGT	3 cut(s)	67, 409, 533
BstBAI	YACGTR	1 cut(s)	100
BstDEI	CTNAG	1 cut(s)	662
BstDSI	CCRYGG	2 cut(s)	17, 562
BstF5I	GGATG	2 cut(s)	167, 481
BstFNI	CGCG	2 cut(s)	44, 116
BstHHI	GCGC	1 cut(s)	116
BstKTI	GATC	4 cut(s)	39, 255, 285, 594
BstMAI	GTCTC	1 cut(s)	213
BstMBI	GATC	4 cut(s)	36, 252, 282, 591
BstMWI	GCNNNNNNNGC	2 cut(s)	389, 513
BstNI	CCWGG	1 cut(s)	172
BstSCI	CCNGG	1 cut(s)	170
BstSFI	CTRYAG	2 cut(s)	452, 580
BstUI	CGCG	2 cut(s)	44, 116
BstV1I	GCAGC	6 cut(s)	96, 207, 352, 438, 539, 594
BstX2I	RGATCY	3 cut(s)	252, 282, 591
BstYI	RGATCY	3 cut(s)	252, 282, 591
Bsu36I	CCTNAGG	1 cut(s)	662
BsuRI	GGCC	2 cut(s)	15, 507
BtgI	CCRYGG	2 cut(s)	17, 562
BtgZI	GCGATG	1 cut(s)	25
BtsCI	GGATG	2 cut(s)	167, 481
BtsI	GCAGTG	1 cut(s)	315
BtsIMutI	CAGTG	3 cut(s)	315, 405, 636
BtuMI	TCGCGA	1 cut(s)	44
CaiI	CAGNNNCTG	1 cut(s)	460
CfoI	GCGC	1 cut(s)	116
Cfr10I	RCCGGY	1 cut(s)	503
Cfr13I	GGNCC	3 cut(s)	14, 135, 372
Csp6I	GTAC	2 cut(s)	103, 670
CviAII	CATG	3 cut(s)	18, 563, 642
CviQI	GTAC	2 cut(s)	103, 670
DdeI	CTNAG	1 cut(s)	662
DpnI	GATC	4 cut(s)	38, 254, 284, 593
DpnII	GATC	4 cut(s)	36, 252, 282, 591
EciI	GGCGGA	1 cut(s)	254
Eco130I	CCWWGG	4 cut(s)	17, 270, 562, 586
Eco24I	GRGCYC	1 cut(s)	707
Eco47I	GGWCC	2 cut(s)	135, 372
Eco72I	CACGTG	1 cut(s)	100
Eco81I	CCTNAGG	1 cut(s)	662
EcoRII	CCWGG	1 cut(s)	170
EcoT14I	CCWWGG	4 cut(s)	17, 270, 562, 586
EcoT38I	GRGCYC	1 cut(s)	707
ErhI	CCWWGG	4 cut(s)	17, 270, 562, 586
FaeI	CATG	3 cut(s)	21, 566, 645
FaiI	YATR	9 cut(s)	19, 330, 336, 338, 363, 564, 643, 648, 681
FaqI	GGGAC	1 cut(s)	188
FatI	CATG	3 cut(s)	17, 562, 641
FbaI	TGATCA	1 cut(s)	36
Fnu4HI	GCNGC	6 cut(s)	85, 196, 366, 452, 553, 583
FokI	GGATG	2 cut(s)	154, 488
FriOI	GRGCYC	1 cut(s)	707
Fsp4HI	GCNGC	6 cut(s)	85, 196, 366, 452, 553, 583
FspBI	CTAG	1 cut(s)	714
GlaI	GCGC	1 cut(s)	115
GluI	GCNGC	6 cut(s)	85, 196, 366, 452, 553, 583
GsaI	CCCAGC	1 cut(s)	354
GsuI	CTGGAG	2 cut(s)	205, 532
HaeIII	GGCC	2 cut(s)	15, 507
HapII	CCGG	2 cut(s)	504, 609
HhaI	GCGC	1 cut(s)	116
Hin1II	CATG	3 cut(s)	21, 566, 645
Hin6I	GCGC	1 cut(s)	114
HinP1I	GCGC	1 cut(s)	114
HincII	GTYRAC	2 cut(s)	277, 301
HindII	GTYRAC	2 cut(s)	277, 301
HinfI	GANTC	4 cut(s)	176, 218, 225, 323
HpaII	CCGG	2 cut(s)	504, 609
HphI	GGTGA	2 cut(s)	139, 403
Hpy166II	GTNNAC	5 cut(s)	103, 147, 277, 301, 577
Hpy188I	TCNGA	3 cut(s)	139, 188, 737
Hpy188III	TCNNGA	6 cut(s)	43, 154, 222, 431, 527, 541
Hpy8I	GTNNAC	5 cut(s)	103, 147, 277, 301, 577
Hpy99I	CGWCG	3 cut(s)	28, 67, 143
HpyAV	CCTTC	6 cut(s)	118, 160, 172, 190, 322, 694
HpyCH4III	ACNGT	3 cut(s)	67, 409, 533
HpyCH4IV	ACGT	1 cut(s)	99
HpyCH4V	TGCA	6 cut(s)	344, 368, 454, 536, 555, 582
HpyF10VI	GCNNNNNNNGC	2 cut(s)	389, 513
HpyF3I	CTNAG	1 cut(s)	662
HpySE526I	ACGT	1 cut(s)	99
Hsp92II	CATG	3 cut(s)	21, 566, 645
HspAI	GCGC	1 cut(s)	114
Ksp22I	TGATCA	1 cut(s)	36
Kzo9I	GATC	4 cut(s)	36, 252, 282, 591
LmnI	GCTCC	3 cut(s)	30, 488, 498
Lsp1109I	GCAGC	6 cut(s)	96, 207, 352, 438, 539, 594
LweI	GCATC	1 cut(s)	176
MaeI	CTAG	1 cut(s)	714
MaeII	ACGT	1 cut(s)	99
MaeIII	GTNAC	1 cut(s)	409
MalI	GATC	4 cut(s)	38, 254, 284, 593
MboI	GATC	4 cut(s)	36, 252, 282, 591
MboII	GAAGA	1 cut(s)	175
MfeI	CAATTG	1 cut(s)	596
MflI	RGATCY	3 cut(s)	252, 282, 591
MhlI	GDGCHC	3 cut(s)	485, 503, 707
MluCI	AATT	4 cut(s)	75, 244, 596, 694
MlyI	GAGTC	3 cut(s)	170, 212, 219
MmeI	TCCRAC	2 cut(s)	162, 261
MseI	TTAA	2 cut(s)	74, 636
MslI	CAYNNNNRTG	2 cut(s)	65, 125
MspA1I	CMGCKG	2 cut(s)	205, 552
MspI	CCGG	2 cut(s)	504, 609
MspR9I	CCNGG	1 cut(s)	172
MunI	CAATTG	1 cut(s)	596
Mva1269I	GAATGC	1 cut(s)	536
MvaI	CCWGG	1 cut(s)	172
MvnI	CGCG	2 cut(s)	44, 116
MwoI	GCNNNNNNNGC	2 cut(s)	389, 513
NcoI	CCATGG	2 cut(s)	17, 562
NdeII	GATC	4 cut(s)	36, 252, 282, 591
NlaIII	CATG	3 cut(s)	21, 566, 645
NlaIV	GGNNCC	1 cut(s)	593
NmuCI	GTSAC	1 cut(s)	409
NruI	TCGCGA	1 cut(s)	44
OliI	CACNNNNGTG	2 cut(s)	65, 125
PctI	GAATGC	1 cut(s)	536
PfeI	GAWTC	1 cut(s)	323
PkrI	GCNGC	6 cut(s)	86, 197, 367, 453, 554, 584
PleI	GAGTC	3 cut(s)	170, 212, 219
PmaCI	CACGTG	1 cut(s)	100
PmlI	CACGTG	1 cut(s)	100
PpsI	GAGTC	3 cut(s)	170, 212, 219
Ppu21I	YACGTR	1 cut(s)	100
Psp6I	CCWGG	1 cut(s)	170
PspCI	CACGTG	1 cut(s)	100
PspFI	CCCAGC	1 cut(s)	350
PspGI	CCWGG	1 cut(s)	170
PspN4I	GGNNCC	1 cut(s)	593
PspPI	GGNCC	3 cut(s)	14, 135, 372
PstI	CTGCAG	2 cut(s)	456, 584
PstNI	CAGNNNCTG	1 cut(s)	460
PsuI	RGATCY	3 cut(s)	252, 282, 591
PvuII	CAGCTG	2 cut(s)	205, 552
RruI	TCGCGA	1 cut(s)	44
RsaI	GTAC	2 cut(s)	104, 671
RsaNI	GTAC	2 cut(s)	103, 670
RseI	CAYNNNNRTG	2 cut(s)	65, 125
SaqAI	TTAA	2 cut(s)	74, 636
SatI	GCNGC	6 cut(s)	85, 196, 366, 452, 553, 583
Sau3AI	GATC	4 cut(s)	36, 252, 282, 591
Sau96I	GGNCC	3 cut(s)	14, 135, 372
ScaI	AGTACT	1 cut(s)	671
SchI	GAGTC	3 cut(s)	170, 212, 219
ScrFI	CCNGG	1 cut(s)	172
SduI	GDGCHC	3 cut(s)	485, 503, 707
SfaNI	GCATC	1 cut(s)	176
SfcI	CTRYAG	2 cut(s)	452, 580
SinI	GGWCC	2 cut(s)	135, 372
SmiMI	CAYNNNNRTG	2 cut(s)	65, 125
SmlI	CTYRAG	1 cut(s)	431
SmoI	CTYRAG	1 cut(s)	431
Sse9I	AATT	4 cut(s)	75, 244, 596, 694
SsiI	CCGC	4 cut(s)	5, 116, 265, 320
SspMI	CTAG	1 cut(s)	714
StyD4I	CCNGG	1 cut(s)	170
StyI	CCWWGG	4 cut(s)	17, 270, 562, 586
TaaI	ACNGT	3 cut(s)	67, 409, 533
TaiI	ACGT	1 cut(s)	102
TasI	AATT	4 cut(s)	75, 244, 596, 694
TatI	WGTACW	2 cut(s)	102, 669
TfiI	GAWTC	1 cut(s)	323
Tru1I	TTAA	2 cut(s)	74, 636
Tru9I	TTAA	2 cut(s)	74, 636
TscAI	CASTG	3 cut(s)	322, 412, 636
TseFI	GTSAC	1 cut(s)	409
TseI	GCWGC	6 cut(s)	84, 195, 365, 451, 552, 582
Tsp45I	GTSAC	1 cut(s)	409
TspDTI	ATGAA	1 cut(s)	663
TspGWI	ACGGA	2 cut(s)	99, 247
TspRI	CASTG	3 cut(s)	322, 412, 636
VpaK11BI	GGWCC	2 cut(s)	135, 372
XapI	RAATTY	1 cut(s)	694
XspI	CTAG	1 cut(s)	714
ZrmI	AGTACT	1 cut(s)	671

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.