Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0001360

Physical Location & Seq

Genomic Coordinates Reverse (-)

20742552 .. 20744024

Gene Structure 1473 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g23420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1473 bp

ATGGGCGGATTCATGGCATTTTTCTATTTCTTGCTGTTTGCTGTTTCTTTGGTTCTGGTTCTCCGGTTCATGTCCAAAACATCTCTGGTTCACAAATTGACAAAATTATGGCAATCCTTGGCGGACCGGTTCAGAGTCTACCAGTTTTACAAAATCCCGCAGTTCAACGAGCACTTCCAAGAGAACCAGCTCTACGGCAAGATCTCCGTCTACCTCGACTCCCTCCCTTCCATCGAGGATTCCGACTTCACCAACCTCTTCACCGGCGCCAAATCCAACGACATCGTCTTCCGGCACGACGCCAACAACTCTGCCGTCCACGACACCTTCCTCAGCGCCAAGCTCTCTTGGAGTATTCAGAAATCCCAGTCCGACGGAATCCGATCCTTCGTTTTGAAAATCAACCGGTCCGACAAGCGCCGCGTGTTCCGCCAGTACTTCCAACACATTCTTACCGTCGCCGATGAAATCGAGCAGCGGAACAGAGATATCAAGCTGTACATGAACCTCTCGCGTGAAAACGAACGGTGGCGATCGGTTCCGTTCACGCACCCCGCCACCTTCGACACCGTCGTGATGGACGCCGAGCTGAAGAATAAAGTCCGGTCCGATCTTGAGAATTTCTCGAAATCGAAGCAGTATTATCACCGACTAGGCCGAGTTTGGAAGCGGAGCTTTTTGCTCTACGGCCCCTCCGGCACCGGAAAAACCAGCTTCGTCGCCGCCATGGCGAGGTTCTTAGGCTACGACGTATACGACGTCGACATGTCCAAAGTCGCCGATGACTCCGATTTGAAAATGCTTCTCCTCCAAACGACGCCGAAGTCGCTGATCGTGGTGGAGGATCTGGACCGTTTCTTGGCGGAGAAATCCACGGCTGTGAGCTTGTCCGGGCTGTTGAATTTTATGGACGGGATAGTGTCGTCGTGCGGTGAGGAGCGCGTCTTGGTTTTCACGATGAACGGTAAGGATCAGGTGGACCAGTTGGTTTTGAGGCCGGGTCGGGTCGATGTCCACATCCATTTTCCACTCTGCGATTTTTCCGCTTTCAAGAGCTTGGCCAGCACTTACCTCGGGCTAAAGGAACACAAGCTGTTCCCGCAGGTGGAGGAGATTTTCCACGGAGGAGCGAGTCTGAGCCCGGCGGCGATCGGCGAGATTATGATTTCGAATCGGAGCTCGCCCAGTCGGGCTTTGAAGTCGGTTATCTCGGCGTTGCAGACGAATGTGGATAGTATGAAGGGAGCGAACAAAGTCGGGCAAACGTTGTCAAATAGTTCGTCGGGTCGGTCCGTCGACGAGTCGGGCGAACCCAGCGCCGTTTTTTGCCATGAAAGTGTTCACACGGTGAGGGAGTTCAGGAAATTGTACGGTCTTTTGAAAATGGGGAGTCGGAGGAAGGAAGAGCCGCCGTTGGATTCAAGTTCCGCGGAGAAGTTGGATGGTTTAAGGCATGAAAGGTTGAATTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006996 GO:0007005 GO:0008150 GO:0009987 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017004 GO:0017062 GO:0017111 GO:0019866 GO:0022607 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0033108 GO:0034551 GO:0034622 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0065003 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

491

Amino Acids

55.68

Weight (kDa)

9.11

Isoelectric Point (pI)

48.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	30 - 119	8e-08	Domain associated at C-terminal with AAA
AAA	PF00004	227 - 344	9.9e-16	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	345 - 409	5.8e-12	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001360)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46620
fragaria_vesca	FvH4_7g17220 FvH4_7g32500
malus_domestica	MD01G1085900.v1.1 MD01G1225700.v1.1 MD02G1229200.v1.1 MD07G1155000.v1.1 MD07G1296200.v1.1
prunus_persica	Prupe.2G193700_v2.0.a1 Prupe.2G315800_v2.0.a1
pyrus_communis	pycom01g23420 pycom07g15210 pycom07g26900
rosa_chinensis	RchiOBHm_Chr1g0360611 RchiOBHm_Chr1g0382341 RchiOBHm_Chr2g0086831 RchiOBHm_Chr2g0139501 RchiOBHm_Chr3g0458211 RchiOBHm_Chr3g0478421 RchiOBHm_Chr4g0427361
rosa_laevigata	RLG00000002572 RLG00000009827 RLG00000026185 RLG00000027795 RLG00000030781
rosa_multiflora	Rmu_sc0000110.1_g000040 Rmu_sc0001436.1_g000033 Rmu_sc0002188.1_g000003 Rmu_sc0002535.1_g000007 Rmu_sc0003020.1_g000016 Rmu_sc0003481.1_g000013 Rmu_sc0004697.1_g000002 Rmu_sc0007558.1_g000001 Rmu_sc0010192.1_g000001 Rmu_sc0015587.1_g000001 Rmu_sc0042341.1_g000002
rosa_roxburghii	Rroxscaffold_2G00093530 Rroxscaffold_4G00278180
rosa_rugosa	Rorug01G0280000 Rorug01G0433500 Rorug02G0149500 Rorug05G0571400
rosa_samantha	Rh1AG292200 Rh1BG257100 Rh1BG414500 Rh1CG274900 Rh1DG287000 Rh1DG446600 Rh5BG487600 Rh5CG511800
rosa_wichuraiana	Rw1G025870 Rw1G041280 Rw5G043520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1093
AasI	GACNNNNNNGTC	1 cut(s)	823
AatII	GACGTC	1 cut(s)	762
Acc36I	ACCTGC	1 cut(s)	1093
AccB1I	GGYRCC	2 cut(s)	266, 698
AccI	GTMKAC	5 cut(s)	138, 210, 753, 762, 1296
AccII	CGCG	4 cut(s)	423, 514, 942, 1430
AclI	AACGTT	1 cut(s)	1265
AclWI	GGATC	3 cut(s)	378, 852, 978
AcoI	YGGCCR	1 cut(s)	1059
AcsI	RAATTY	3 cut(s)	619, 901, 1465
AcuI	CTGAAG	1 cut(s)	611
AcyI	GRCGYC	5 cut(s)	267, 300, 582, 759, 818
AdeI	CACNNNGTG	1 cut(s)	1348
AfaI	GTAC	3 cut(s)	437, 500, 1370
AfiI	CCNNNNNNNGG	3 cut(s)	732, 859, 1105
AflIII	ACRYGT	1 cut(s)	765
AgeI	ACCGGT	2 cut(s)	126, 405
AgsI	TTSAA	9 cut(s)	166, 397, 796, 901, 1051, 1198, 1381, 1422, 1465
AleI	CACNNNNGTG	2 cut(s)	572, 878
Alw21I	GWGCWC	2 cut(s)	174, 1181
AlwI	GGATC	3 cut(s)	378, 852, 978
Ama87I	CYCGRG	1 cut(s)	1073
AoxI	GGCC	4 cut(s)	655, 688, 995, 1059
ApeKI	GCWGC	1 cut(s)	475
ApoI	RAATTY	3 cut(s)	619, 901, 1465
ArsI	GACNNNNNNTTYG	2 cut(s)	1265, 1297
AsiGI	ACCGGT	2 cut(s)	126, 405
Asp700I	GAANNNNTTC	1 cut(s)	1338
AspLEI	GCGC	5 cut(s)	269, 338, 420, 942, 1319
AspS9I	GGNCC	7 cut(s)	124, 408, 606, 689, 850, 979, 1290
AsuC2I	CCSGG	3 cut(s)	892, 999, 1142
AsuHPI	GGTGA	5 cut(s)	241, 253, 638, 944, 1360
AsuII	TTCGAA	1 cut(s)	1169
AvaI	CYCGRG	1 cut(s)	1073
AvaII	GGWCC	6 cut(s)	124, 408, 606, 850, 979, 1290
BalI	TGGCCA	1 cut(s)	1061
BanI	GGYRCC	2 cut(s)	266, 698
BanII	GRGCYC	2 cut(s)	1142, 1181
BbsI	GAAGAC	1 cut(s)	280
Bbv12I	GWGCWC	2 cut(s)	174, 1181
BbvCI	CCTCAGC	1 cut(s)	332
BbvI	GCAGC	1 cut(s)	487
BccI	CCATC	3 cut(s)	239, 571, 1436
BceAI	ACGGC	6 cut(s)	211, 299, 703, 891, 1304, 1396
BcgI	CGANNNNNNTGC	2 cut(s)	1054, 1088
BcnI	CCSGG	3 cut(s)	892, 999, 1142
BfaI	CTAG	1 cut(s)	653
BfoI	RGCGCY	4 cut(s)	270, 339, 421, 1320
BfuAI	ACCTGC	1 cut(s)	1093
BglI	GCCNNNNNGGC	2 cut(s)	696, 728
BglII	AGATCT	1 cut(s)	201
BisI	GCNGC	5 cut(s)	421, 476, 723, 1146, 1409
BlsI	GCNGC	5 cut(s)	422, 477, 724, 1147, 1410
BmcAI	AGTACT	1 cut(s)	437
Bme1390I	CCNGG	3 cut(s)	892, 999, 1142
Bme18I	GGWCC	6 cut(s)	124, 408, 606, 850, 979, 1290
BmeT110I	CYCGRG	1 cut(s)	1073
BmgT120I	GGNCC	7 cut(s)	124, 408, 606, 689, 850, 979, 1290
BmiI	GGNNCC	4 cut(s)	268, 540, 691, 700
BmrFI	CCNGG	3 cut(s)	892, 999, 1142
BmrI	ACTGGG	2 cut(s)	361, 1179
BmuI	ACTGGG	2 cut(s)	361, 1179
BpiI	GAAGAC	1 cut(s)	280
BplI	GAGNNNNNCTC	2 cut(s)	608, 640
Bpu10I	CCTNAGC	1 cut(s)	332
Bpu14I	TTCGAA	1 cut(s)	1169
BpuEI	CTTGAG	1 cut(s)	635
BpuMI	CCSGG	3 cut(s)	892, 999, 1142
BsaHI	GRCGYC	5 cut(s)	267, 300, 582, 759, 818
BsaJI	CCNNGG	6 cut(s)	117, 726, 873, 1072, 1120, 1428
BsaWI	WCCGGW	5 cut(s)	63, 126, 405, 603, 701
BsaXI	ACNNNNNCTCC	4 cut(s)	203, 233, 677, 707
Bsc4I	CCNNNNNNNGG	3 cut(s)	732, 859, 1105
Bse118I	RCCGGY	3 cut(s)	126, 263, 405
Bse1I	ACTGG	5 cut(s)	142, 367, 433, 982, 1185
BseDI	CCNNGG	6 cut(s)	117, 726, 873, 1072, 1120, 1428
BseGI	GGATG	2 cut(s)	1017, 1447
BseLI	CCNNNNNNNGG	3 cut(s)	732, 859, 1105
BseMII	CTCAG	2 cut(s)	346, 1127
BseNI	ACTGG	5 cut(s)	142, 367, 433, 982, 1185
BseRI	GAGGAG	4 cut(s)	797, 950, 1124, 1140
BseXI	GCAGC	1 cut(s)	487
BseYI	CCCAGC	1 cut(s)	1313
Bsh1236I	CGCG	4 cut(s)	423, 514, 942, 1430
Bsh1285I	CGRYCG	2 cut(s)	536, 1152
BshFI	GGCC	4 cut(s)	657, 690, 997, 1061
BshNI	GGYRCC	2 cut(s)	266, 698
BshTI	ACCGGT	2 cut(s)	126, 405
BsiEI	CGRYCG	2 cut(s)	536, 1152
BsiHKAI	GWGCWC	2 cut(s)	174, 1181
BsiHKCI	CYCGRG	1 cut(s)	1073
BslI	CCNNNNNNNGG	3 cut(s)	732, 859, 1105
BsnI	GGCC	4 cut(s)	657, 690, 997, 1061
BsoBI	CYCGRG	1 cut(s)	1073
Bsp119I	TTCGAA	1 cut(s)	1169
Bsp1286I	GDGCHC	3 cut(s)	174, 1142, 1181
Bsp1407I	TGTACA	1 cut(s)	498
Bsp143I	GATC	8 cut(s)	201, 383, 533, 610, 831, 844, 970, 1149
Bsp19I	CCATGG	1 cut(s)	726
BspANI	GGCC	4 cut(s)	657, 690, 997, 1061
BspCNI	CTCAG	2 cut(s)	345, 1128
BspFNI	CGCG	4 cut(s)	423, 514, 942, 1430
BspLI	GGNNCC	4 cut(s)	268, 540, 691, 700
BspMI	ACCTGC	1 cut(s)	1093
BspPI	GGATC	3 cut(s)	378, 852, 978
BspQI	GCTCTTC	1 cut(s)	1398
BspT104I	TTCGAA	1 cut(s)	1169
BspT107I	GGYRCC	2 cut(s)	266, 698
BsrFI	RCCGGY	3 cut(s)	126, 263, 405
BsrGI	TGTACA	1 cut(s)	498
BsrI	ACTGG	5 cut(s)	142, 367, 433, 982, 1185
BssAI	RCCGGY	3 cut(s)	126, 263, 405
BssECI	CCNNGG	6 cut(s)	117, 726, 873, 1072, 1120, 1428
BssMI	GATC	8 cut(s)	201, 383, 533, 610, 831, 844, 970, 1149
BssNAI	GTATAC	1 cut(s)	754
BssNI	GRCGYC	5 cut(s)	267, 300, 582, 759, 818
BssT1I	CCWWGG	2 cut(s)	117, 726
Bst1107I	GTATAC	1 cut(s)	754
Bst4CI	ACNGT	7 cut(s)	457, 528, 571, 854, 965, 1348, 1373
Bst6I	CTCTTC	2 cut(s)	263, 1398
BstACI	GRCGYC	5 cut(s)	267, 300, 582, 759, 818
BstAUI	TGTACA	1 cut(s)	498
BstBI	TTCGAA	1 cut(s)	1169
BstC8I	GCNNGC	2 cut(s)	1063, 1181
BstDEI	CTNAG	3 cut(s)	332, 739, 1136
BstDSI	CCRYGG	4 cut(s)	726, 873, 1120, 1428
BstF5I	GGATG	2 cut(s)	1017, 1447
BstFNI	CGCG	4 cut(s)	423, 514, 942, 1430
BstH2I	RGCGCY	4 cut(s)	270, 339, 421, 1320
BstHHI	GCGC	5 cut(s)	269, 338, 420, 942, 1319
BstKTI	GATC	8 cut(s)	204, 386, 536, 613, 834, 847, 973, 1152
BstMBI	GATC	8 cut(s)	201, 383, 533, 610, 831, 844, 970, 1149
BstMCI	CGRYCG	2 cut(s)	536, 1152
BstMWI	GCNNNNNNNGC	7 cut(s)	429, 696, 728, 826, 1062, 1099, 1314
BstNSI	RCATGY	1 cut(s)	769
BstSCI	CCNGG	3 cut(s)	890, 997, 1140
BstUI	CGCG	4 cut(s)	423, 514, 942, 1430
BstV1I	GCAGC	1 cut(s)	487
BstV2I	GAAGAC	1 cut(s)	280
BstX2I	RGATCY	2 cut(s)	201, 844
BstYI	RGATCY	2 cut(s)	201, 844
BstZ17I	GTATAC	1 cut(s)	754
BsuRI	GGCC	4 cut(s)	657, 690, 997, 1061
BtgI	CCRYGG	4 cut(s)	726, 873, 1120, 1428
BtsCI	GGATG	2 cut(s)	1017, 1447
BveI	ACCTGC	1 cut(s)	1093
Cac8I	GCNNGC	2 cut(s)	1063, 1181
CfoI	GCGC	5 cut(s)	269, 338, 420, 942, 1319
Cfr10I	RCCGGY	3 cut(s)	126, 263, 405
Cfr13I	GGNCC	7 cut(s)	124, 408, 606, 689, 850, 979, 1290
Cfr42I	CCGCGG	1 cut(s)	1431
CpoI	CGGWCCG	4 cut(s)	124, 408, 606, 1290
CseI	GACGC	4 cut(s)	308, 590, 826, 931
Csp6I	GTAC	3 cut(s)	436, 499, 1369
CspAI	ACCGGT	2 cut(s)	126, 405
CspI	CGGWCCG	4 cut(s)	124, 408, 606, 1290
CviAII	CATG	7 cut(s)	13, 70, 502, 727, 766, 1331, 1454
CviQI	GTAC	3 cut(s)	436, 499, 1369
DdeI	CTNAG	3 cut(s)	332, 739, 1136
DinI	GGCGCC	1 cut(s)	268
DpnI	GATC	8 cut(s)	203, 385, 535, 612, 833, 846, 972, 1151
DpnII	GATC	8 cut(s)	201, 383, 533, 610, 831, 844, 970, 1149
DraIII	CACNNNGTG	1 cut(s)	1348
DrdI	GACNNNNNNGTC	1 cut(s)	823
DseDI	GACNNNNNNGTC	1 cut(s)	823
EaeI	YGGCCR	1 cut(s)	1059
Eam1104I	CTCTTC	2 cut(s)	263, 1398
EarI	CTCTTC	2 cut(s)	263, 1398
EciI	GGCGGA	4 cut(s)	21, 137, 419, 878
Ecl136II	GAGCTC	1 cut(s)	1179
Eco130I	CCWWGG	2 cut(s)	117, 726
Eco24I	GRGCYC	2 cut(s)	1142, 1181
Eco32I	GATATC	1 cut(s)	490
Eco47I	GGWCC	6 cut(s)	124, 408, 606, 850, 979, 1290
Eco53kI	GAGCTC	1 cut(s)	1179
Eco57I	CTGAAG	1 cut(s)	611
Eco88I	CYCGRG	1 cut(s)	1073
EcoICRI	GAGCTC	1 cut(s)	1179
EcoRV	GATATC	1 cut(s)	490
EcoT14I	CCWWGG	2 cut(s)	117, 726
EcoT38I	GRGCYC	2 cut(s)	1142, 1181
EgeI	GGCGCC	1 cut(s)	268
EheI	GGCGCC	1 cut(s)	268
ErhI	CCWWGG	2 cut(s)	117, 726
FaeI	CATG	7 cut(s)	16, 73, 505, 730, 769, 1334, 1457
FalI	AAGNNNNNCTT	2 cut(s)	659, 691
FatI	CATG	7 cut(s)	12, 69, 501, 726, 765, 1330, 1453
FauI	CCCGC	3 cut(s)	165, 562, 1107
FblI	GTMKAC	5 cut(s)	138, 210, 753, 762, 1296
Fnu4HI	GCNGC	5 cut(s)	421, 476, 723, 1146, 1409
FokI	GGATG	2 cut(s)	1004, 1454
FriOI	GRGCYC	2 cut(s)	1142, 1181
Fsp4HI	GCNGC	5 cut(s)	421, 476, 723, 1146, 1409
FspBI	CTAG	1 cut(s)	653
GlaI	GCGC	5 cut(s)	268, 337, 419, 941, 1318
GluI	GCNGC	5 cut(s)	421, 476, 723, 1146, 1409
GsaI	CCCAGC	1 cut(s)	1317
HaeII	RGCGCY	4 cut(s)	270, 339, 421, 1320
HaeIII	GGCC	4 cut(s)	657, 690, 997, 1061
HgaI	GACGC	4 cut(s)	308, 590, 826, 931
HhaI	GCGC	5 cut(s)	269, 338, 420, 942, 1319
Hin1I	GRCGYC	5 cut(s)	267, 300, 582, 759, 818
Hin1II	CATG	7 cut(s)	16, 73, 505, 730, 769, 1334, 1457
Hin6I	GCGC	5 cut(s)	267, 336, 418, 940, 1317
HinP1I	GCGC	5 cut(s)	267, 336, 418, 940, 1317
HincII	GTYRAC	2 cut(s)	763, 1297
HindII	GTYRAC	2 cut(s)	763, 1297
HphI	GGTGA	5 cut(s)	241, 253, 638, 944, 1360
Hpy188III	TCNNGA	7 cut(s)	574, 614, 625, 848, 955, 1051, 1360
HpyAV	CCTTC	6 cut(s)	237, 337, 397, 571, 1234, 1393
HpyCH4III	ACNGT	7 cut(s)	457, 528, 571, 854, 965, 1348, 1373
HpyCH4IV	ACGT	3 cut(s)	750, 759, 1265
HpyCH4V	TGCA	1 cut(s)	1219
HpyF10VI	GCNNNNNNNGC	7 cut(s)	429, 696, 728, 826, 1062, 1099, 1314
HpyF3I	CTNAG	3 cut(s)	332, 739, 1136
HpySE526I	ACGT	3 cut(s)	750, 759, 1265
Hsp92I	GRCGYC	5 cut(s)	267, 300, 582, 759, 818
Hsp92II	CATG	7 cut(s)	16, 73, 505, 730, 769, 1334, 1457
HspAI	GCGC	5 cut(s)	267, 336, 418, 940, 1317
KasI	GGCGCC	1 cut(s)	266
KspI	CCGCGG	1 cut(s)	1431
Kzo9I	GATC	8 cut(s)	201, 383, 533, 610, 831, 844, 970, 1149
LguI	GCTCTTC	1 cut(s)	1398
LmnI	GCTCC	5 cut(s)	672, 937, 1127, 1176, 1244
Lsp1109I	GCAGC	1 cut(s)	487
MaeI	CTAG	1 cut(s)	653
MaeII	ACGT	3 cut(s)	750, 759, 1265
MalI	GATC	8 cut(s)	203, 385, 535, 612, 833, 846, 972, 1151
MboI	GATC	8 cut(s)	201, 383, 533, 610, 831, 844, 970, 1149
MboII	GAAGA	4 cut(s)	250, 280, 604, 1415
MflI	RGATCY	2 cut(s)	201, 844
MhlI	GDGCHC	3 cut(s)	174, 1142, 1181
MlsI	TGGCCA	1 cut(s)	1061
MluCI	AATT	6 cut(s)	95, 104, 619, 901, 1364, 1465
MluNI	TGGCCA	1 cut(s)	1061
Mly113I	GGCGCC	1 cut(s)	267
MlyI	GAGTC	6 cut(s)	144, 212, 779, 1141, 1310, 1399
MmeI	TCCRAC	8 cut(s)	267, 300, 396, 435, 466, 1373, 1395, 1419
Mox20I	TGGCCA	1 cut(s)	1061
MroXI	GAANNNNTTC	1 cut(s)	1338
MscI	TGGCCA	1 cut(s)	1061
MseI	TTAA	1 cut(s)	1448
MslI	CAYNNNNRTG	3 cut(s)	572, 878, 1335
Msp20I	TGGCCA	1 cut(s)	1061
MspA1I	CMGCKG	2 cut(s)	478, 1430
MspR9I	CCNGG	3 cut(s)	892, 999, 1142
MvnI	CGCG	4 cut(s)	423, 514, 942, 1430
MwoI	GCNNNNNNNGC	7 cut(s)	429, 696, 728, 826, 1062, 1099, 1314
NarI	GGCGCC	1 cut(s)	267
NciI	CCSGG	3 cut(s)	892, 999, 1142
NcoI	CCATGG	1 cut(s)	726
NdeII	GATC	8 cut(s)	201, 383, 533, 610, 831, 844, 970, 1149
NlaIII	CATG	7 cut(s)	16, 73, 505, 730, 769, 1334, 1457
NlaIV	GGNNCC	4 cut(s)	268, 540, 691, 700
NmeAIII	GCCGAG	3 cut(s)	610, 683, 1190
NspI	RCATGY	1 cut(s)	769
NspV	TTCGAA	1 cut(s)	1169
OliI	CACNNNNGTG	2 cut(s)	572, 878
PaqCI	CACCTGC	1 cut(s)	1093
PciI	ACATGT	1 cut(s)	765
PciSI	GCTCTTC	1 cut(s)	1398
PcsI	WCGNNNNNNNCGW	5 cut(s)	240, 570, 753, 756, 1305
PdmI	GAANNNNTTC	1 cut(s)	1338
PfeI	GAWTC	5 cut(s)	9, 239, 378, 1171, 1418
PflFI	GACNNNGTC	2 cut(s)	284, 569
PinAI	ACCGGT	2 cut(s)	126, 405
PkrI	GCNGC	5 cut(s)	422, 477, 724, 1147, 1410
Ple19I	CGATCG	2 cut(s)	536, 1152
PleI	GAGTC	6 cut(s)	143, 212, 779, 1140, 1309, 1398
PluTI	GGCGCC	1 cut(s)	270
PpsI	GAGTC	6 cut(s)	143, 212, 779, 1140, 1309, 1398
PscI	ACATGT	1 cut(s)	765
Psp124BI	GAGCTC	1 cut(s)	1181
Psp1406I	AACGTT	1 cut(s)	1265
PspFI	CCCAGC	1 cut(s)	1313
PspN4I	GGNNCC	4 cut(s)	268, 540, 691, 700
PspPI	GGNCC	7 cut(s)	124, 408, 606, 689, 850, 979, 1290
PsrI	GAACNNNNNNTAC	2 cut(s)	176, 208
PsuI	RGATCY	2 cut(s)	201, 844
PsyI	GACNNNGTC	2 cut(s)	284, 569
PvuI	CGATCG	2 cut(s)	536, 1152
RsaI	GTAC	3 cut(s)	437, 500, 1370
RsaNI	GTAC	3 cut(s)	436, 499, 1369
RseI	CAYNNNNRTG	3 cut(s)	572, 878, 1335
Rsr2I	CGGWCCG	4 cut(s)	124, 408, 606, 1290
RsrII	CGGWCCG	4 cut(s)	124, 408, 606, 1290
SacI	GAGCTC	1 cut(s)	1181
SacII	CCGCGG	1 cut(s)	1431
SalI	GTCGAC	2 cut(s)	761, 1295
SapI	GCTCTTC	1 cut(s)	1398
SaqAI	TTAA	1 cut(s)	1448
SatI	GCNGC	5 cut(s)	421, 476, 723, 1146, 1409
Sau3AI	GATC	8 cut(s)	201, 383, 533, 610, 831, 844, 970, 1149
Sau96I	GGNCC	7 cut(s)	124, 408, 606, 689, 850, 979, 1290
ScaI	AGTACT	1 cut(s)	437
SchI	GAGTC	6 cut(s)	144, 212, 779, 1141, 1310, 1399
ScrFI	CCNGG	3 cut(s)	892, 999, 1142
SduI	GDGCHC	3 cut(s)	174, 1142, 1181
SfoI	GGCGCC	1 cut(s)	268
Sfr303I	CCGCGG	1 cut(s)	1431
SfuI	TTCGAA	1 cut(s)	1169
SgrAI	CRCCGGYG	1 cut(s)	263
SgrBI	CCGCGG	1 cut(s)	1431
SgrDI	CGTCGACG	1 cut(s)	1295
SinI	GGWCC	6 cut(s)	124, 408, 606, 850, 979, 1290
SmiMI	CAYNNNNRTG	3 cut(s)	572, 878, 1335
SmlI	CTYRAG	1 cut(s)	614
SmoI	CTYRAG	1 cut(s)	614
Sse9I	AATT	6 cut(s)	95, 104, 619, 901, 1364, 1465
SspDI	GGCGCC	1 cut(s)	266
SspMI	CTAG	1 cut(s)	653
SstI	GAGCTC	1 cut(s)	1181
StyD4I	CCNGG	3 cut(s)	890, 997, 1140
StyI	CCWWGG	2 cut(s)	117, 726
TaaI	ACNGT	7 cut(s)	457, 528, 571, 854, 965, 1348, 1373
TaiI	ACGT	3 cut(s)	753, 762, 1268
TaqII	GACCGA	1 cut(s)	1278
TasI	AATT	6 cut(s)	95, 104, 619, 901, 1364, 1465
TatI	WGTACW	2 cut(s)	435, 498
TauI	GCSGC	4 cut(s)	423, 725, 1148, 1411
TfiI	GAWTC	5 cut(s)	9, 239, 378, 1171, 1418
Tru1I	TTAA	1 cut(s)	1448
Tru9I	TTAA	1 cut(s)	1448
TseI	GCWGC	1 cut(s)	475
TspDTI	ATGAA	7 cut(s)	58, 480, 518, 974, 1253, 1347, 1470
TspGWI	ACGGA	5 cut(s)	196, 390, 531, 1137, 1282
Tth111I	GACNNNGTC	2 cut(s)	284, 569
VpaK11BI	GGWCC	6 cut(s)	124, 408, 606, 850, 979, 1290
XapI	RAATTY	3 cut(s)	619, 901, 1465
XceI	RCATGY	1 cut(s)	769
XcmI	CCANNNNNNNNNTGG	1 cut(s)	82
XmiI	GTMKAC	5 cut(s)	138, 210, 753, 762, 1296
XmnI	GAANNNNTTC	1 cut(s)	1338
XspI	CTAG	1 cut(s)	653
ZraI	GACGTC	1 cut(s)	760
ZrmI	AGTACT	1 cut(s)	437

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.