Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001360

Physical Location & Seq

Genomic Coordinates Forward (+)

13160075 .. 13162589

Gene Structure 2515 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0149500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGAGAGTACCCGTTACCACACCCCAAACCAACAACAGCAACCAATCTCCAAACCCTAAACCCGAAACCAATCTCGGATTCCACACTCCTTCGCGCATCAATCCAAACCTCTACTACGAGCCAACCTCCGTTCTCGACCTCCGCCACAGCCCCAGCCCAGTGGCGGCCGATAAGCCGTCAAAAGTTTCAGCTATCTCCGACGTCCTGACTCACTCGAATCACCATGAGCCTCTCGAGTGGGTCGACGAGCAGGATCTTCACAACTTGGACTGGGACTCCCTCATGAGAGACTTGGGCTTGCACGACGACTCTGTCCTTAACCTGAGACCTACTACTAATACACAGCTGAACCCCCACCCCAACAGCGAGCCTCAGATTCCTCATCTCCCGGAGTACCCTCATCCACAGCCGTTCGATCCCACCCAGCTGGTCCACTCCGACTTCAACCTCTCCGGGGTCTACTCCTCCCAGAATTTCAGCCACCACAATCTGCCTTCATATGATCAGACCGATATTCATTCCTCGGTGAACTCCAACGTGGGGTTCGATTTCATCGAGGAGCTGATCCGAGCCGCGGACTGTTTCGACTCTGACGAGCTCAACCTGGCTCAGGTGATCCTCGACCGGCTCAACCAACGTCAGCGATTGTCCTCGCCCAACCCAAAACCTCTTGGAAAACCTCTCCAGCGAGCCGCGGTTTATTTCAAAGACGCTCTCCAGTCCCTCCTCAACAACTCCACCGGTTCAAGTCCGGTTCGCAACCTCTCCTCCTGGTCTGAAATTGTCCAGACCATCAGAGCCTACAAGGGCTTTTCGGGGATTTCGCCTATCCCGATGTTCTCGCACTTCACAACTAACCAGGCCCTCCTCGAAGCGCTCAACGGCTCCAGCTTCATCCACGTCATCGACTTCGACATCGGCCTCGGCGGCCAGTACGCTTCGCTGATGAAAGAGCTCGCCGAGAAAGCTGACGTGTCGAGGTCCAACCCGCCGGTGCTGCGCATCACCGCCGTCGTGCCGGAGGAGTACGCCGTCGAGAGCAGGCTGGTGAGAGAGAACCTGTCGCAGTTCGCTCAGGAACTCAAGATCAGATTCCAAATCGAATTCCTTCTCGTCCGAACCTTCGAGATTCTCTCCTTCAAGGCGATCAAGTTCATGGACGGAGAGAAAACGGCGATTCTGCTGTCGCCGTACATCATGCGCCGCCTCAGCTCGGCCGAGAACGTCCGCGCATTTCTCGGCGACATCAGGCGAGTGTCGCCGAGCGTGGTGGTGTTCGTCGACGGCGAGGGGCTGGCCGAGTCGGGAGCGACGTCGTTCAGGAGGAACTTCGTGTCCGGGCTCGAGTTCTTCTCGATTGTTTTGGAGTCGCTGGACGCGGCGGTGCCGGGTGGCGAGATGGTGAGGAAGATCGAGACGTTTCTGTTGAGGCCGAAGATCGAGGCTGCGGTGGAGGCAGCGGGGAGGCGGGTCCAGCCGTGGCGGGAAGTGTTTCACGGCGCGGGAATGAGGGCCGTGGAGCTGAGCCAGTTTGCGGACTTTCAGGCCCAGTGCTTGTTGGGCAAGGTCCAGGTCAGGGGGTTCCACGTGGCGAAGCGGCAGGCGGAGCTGGTGCTGTGCTGGCATGATAGGGCCCTGGTGGCCACGTCGGCATGGAGGTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006996 GO:0007005 GO:0008150 GO:0009987 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017004 GO:0017062 GO:0017111 GO:0019866 GO:0022607 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0033108 GO:0034551 GO:0034622 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0065003 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

554

Amino Acids

62.05

Weight (kDa)

5.96

Isoelectric Point (pI)

45.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	186 - 553	1.7e-96	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001360)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46620
fragaria_vesca	FvH4_7g17220 FvH4_7g32500
malus_domestica	MD01G1085900.v1.1 MD01G1225700.v1.1 MD02G1229200.v1.1 MD07G1155000.v1.1 MD07G1296200.v1.1
prunus_persica	Prupe.2G193700_v2.0.a1 Prupe.2G315800_v2.0.a1
pyrus_communis	pycom01g23420 pycom07g15210 pycom07g26900
rosa_chinensis	RchiOBHm_Chr1g0360611 RchiOBHm_Chr1g0382341 RchiOBHm_Chr2g0086831 RchiOBHm_Chr2g0139501 RchiOBHm_Chr3g0458211 RchiOBHm_Chr3g0478421 RchiOBHm_Chr4g0427361
rosa_laevigata	RLG00000002572 RLG00000009827 RLG00000026185 RLG00000027795 RLG00000030781
rosa_multiflora	Rmu_sc0000110.1_g000040 Rmu_sc0001436.1_g000033 Rmu_sc0002188.1_g000003 Rmu_sc0002535.1_g000007 Rmu_sc0003020.1_g000016 Rmu_sc0003481.1_g000013 Rmu_sc0004697.1_g000002 Rmu_sc0007558.1_g000001 Rmu_sc0010192.1_g000001 Rmu_sc0015587.1_g000001 Rmu_sc0042341.1_g000002
rosa_roxburghii	Rroxscaffold_2G00093530 Rroxscaffold_4G00278180
rosa_rugosa	Rorug01G0280000 Rorug01G0433500 Rorug02G0149500 Rorug05G0571400
rosa_samantha	Rh1AG292200 Rh1BG257100 Rh1BG414500 Rh1CG274900 Rh1DG287000 Rh1DG446600 Rh5BG487600 Rh5CG511800
rosa_wichuraiana	Rw1G025870 Rw1G041280 Rw5G043520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	311
AatII	GACGTC	2 cut(s)	204, 1316
Acc16I	TGCGCA	1 cut(s)	1001
AccB1I	GGYRCC	1 cut(s)	1384
AccI	GTMKAC	3 cut(s)	243, 459, 1281
AccII	CGCG	6 cut(s)	94, 575, 695, 1230, 1379, 1502
AclWI	GGATC	4 cut(s)	261, 410, 559, 610
AcoI	YGGCCR	5 cut(s)	165, 928, 1215, 1296, 1641
AcsI	RAATTY	2 cut(s)	472, 1103
AcvI	CACGTG	1 cut(s)	1588
AcyI	GRCGYC	2 cut(s)	201, 1313
AfaI	GTAC	5 cut(s)	9, 395, 935, 1028, 1193
AfeI	AGCGCT	1 cut(s)	876
AfiI	CCNNNNNNNGG	8 cut(s)	163, 454, 540, 574, 610, 1213, 1534, 1576
AflIII	ACRYGT	1 cut(s)	972
AgeI	ACCGGT	1 cut(s)	740
AgsI	TTSAA	4 cut(s)	445, 706, 747, 1141
AjiI	CACGTC	3 cut(s)	901, 973, 1647
AjnI	CCWGG	5 cut(s)	603, 770, 858, 1569, 1635
AjuI	GAANNNNNNNTTGG	4 cut(s)	62, 94, 527, 559
AloI	GAACNNNNNNTCC	2 cut(s)	1319, 1351
Alw21I	GWGCWC	2 cut(s)	600, 957
Alw26I	GTCTC	3 cut(s)	282, 319, 1409
AlwI	GGATC	4 cut(s)	261, 410, 559, 610
Ama87I	CYCGRG	2 cut(s)	233, 1343
Aor51HI	AGCGCT	1 cut(s)	876
ApaI	GGGCCC	1 cut(s)	1636
ApeKI	GCWGC	3 cut(s)	997, 1445, 1457
ApoI	RAATTY	2 cut(s)	472, 1103
AsiGI	ACCGGT	1 cut(s)	740
Asp700I	GAANNNNTTC	2 cut(s)	1107, 1491
AspLEI	GCGC	6 cut(s)	96, 877, 1002, 1203, 1232, 1502
AspS9I	GGNCC	9 cut(s)	430, 862, 981, 1471, 1512, 1546, 1567, 1632, 1633
AsuC2I	CCSGG	4 cut(s)	389, 454, 1339, 1389
AsuHPI	GGTGA	6 cut(s)	212, 538, 625, 997, 1060, 1414
AvaI	CYCGRG	2 cut(s)	233, 1343
AvaII	GGWCC	4 cut(s)	430, 981, 1471, 1567
BaeGI	GKGCMC	1 cut(s)	1636
BalI	TGGCCA	1 cut(s)	1643
BanI	GGYRCC	1 cut(s)	1384
BanII	GRGCYC	4 cut(s)	600, 957, 1344, 1636
BbrPI	CACGTG	1 cut(s)	1588
Bbv12I	GWGCWC	2 cut(s)	600, 957
BbvCI	CCTCAGC	1 cut(s)	1208
BbvI	GCAGC	3 cut(s)	984, 1432, 1469
BccI	CCATC	2 cut(s)	800, 1393
BciT130I	CCWGG	5 cut(s)	605, 772, 860, 1571, 1637
BclI	TGATCA	1 cut(s)	502
BcnI	CCSGG	4 cut(s)	389, 454, 1339, 1389
BcoDI	GTCTC	3 cut(s)	282, 319, 1409
BfoI	RGCGCY	1 cut(s)	878
BglI	GCCNNNNNGGC	3 cut(s)	927, 1640, 1649
BlpI	GCTNAGC	1 cut(s)	1523
Bme1390I	CCNGG	9 cut(s)	389, 454, 605, 772, 860, 1339, 1389, 1571, 1637
Bme18I	GGWCC	4 cut(s)	430, 981, 1471, 1567
BmeT110I	CYCGRG	2 cut(s)	233, 1343
BmgBI	CACGTC	3 cut(s)	901, 973, 1647
BmgT120I	GGNCC	9 cut(s)	430, 862, 981, 1471, 1512, 1546, 1567, 1632, 1633
BmiI	GGNNCC	5 cut(s)	886, 1386, 1472, 1583, 1634
BmrFI	CCNGG	9 cut(s)	389, 454, 605, 772, 860, 1339, 1389, 1571, 1637
BmrI	ACTGGG	3 cut(s)	152, 280, 1543
BmsI	GCATC	2 cut(s)	105, 1011
BmuI	ACTGGG	3 cut(s)	152, 280, 1543
BplI	GAGNNNNNCTC	6 cut(s)	110, 142, 1118, 1150, 1337, 1369
BpmI	CTGGAG	3 cut(s)	668, 701, 871
Bpu10I	CCTNAGC	3 cut(s)	609, 1074, 1208
Bpu1102I	GCTNAGC	1 cut(s)	1523
BpuEI	CTTGAG	1 cut(s)	1067
BpuMI	CCSGG	4 cut(s)	389, 454, 1339, 1389
BsaAI	YACGTR	1 cut(s)	1588
BsaHI	GRCGYC	2 cut(s)	201, 1313
BsaI	GGTCTC	1 cut(s)	319
BsaJI	CCNNGG	8 cut(s)	453, 522, 573, 693, 922, 1478, 1515, 1635
BsaWI	WCCGGW	2 cut(s)	740, 751
BsaXI	ACNNNNNCTCC	4 cut(s)	260, 290, 752, 782
Bsc4I	CCNNNNNNNGG	8 cut(s)	163, 454, 540, 574, 610, 1213, 1534, 1576
Bse118I	RCCGGY	3 cut(s)	624, 740, 991
Bse1I	ACTGG	6 cut(s)	158, 275, 718, 931, 1528, 1549
BseBI	CCWGG	5 cut(s)	605, 772, 860, 1571, 1637
BseDI	CCNNGG	8 cut(s)	453, 522, 573, 693, 922, 1478, 1515, 1635
BseGI	GGATG	2 cut(s)	400, 894
BseLI	CCNNNNNNNGG	8 cut(s)	163, 454, 540, 574, 610, 1213, 1534, 1576
BseMII	CTCAG	6 cut(s)	314, 386, 623, 1088, 1222, 1514
BseNI	ACTGG	6 cut(s)	158, 275, 718, 931, 1528, 1549
BseRI	GAGGAG	6 cut(s)	454, 572, 716, 757, 857, 1037
BseSI	GKGCMC	1 cut(s)	1636
BseX3I	CGGCCG	2 cut(s)	165, 1215
BseXI	GCAGC	3 cut(s)	984, 1432, 1469
BseYI	CCCAGC	2 cut(s)	152, 423
Bsh1236I	CGCG	6 cut(s)	94, 575, 695, 1230, 1379, 1502
Bsh1285I	CGRYCG	3 cut(s)	168, 625, 1218
BshNI	GGYRCC	1 cut(s)	1384
BshTI	ACCGGT	1 cut(s)	740
BsiEI	CGRYCG	3 cut(s)	168, 625, 1218
BsiHKAI	GWGCWC	2 cut(s)	600, 957
BsiHKCI	CYCGRG	2 cut(s)	233, 1343
BsiSI	CCGG	9 cut(s)	389, 453, 625, 741, 752, 992, 1019, 1338, 1388
BslFI	GGGAC	2 cut(s)	287, 706
BslI	CCNNNNNNNGG	8 cut(s)	163, 454, 540, 574, 610, 1213, 1534, 1576
BsmAI	GTCTC	3 cut(s)	282, 319, 1409
BsmBI	CGTCTC	1 cut(s)	1409
BsmFI	GGGAC	2 cut(s)	287, 706
Bso31I	GGTCTC	1 cut(s)	319
BsoBI	CYCGRG	2 cut(s)	233, 1343
Bsp120I	GGGCCC	1 cut(s)	1632
Bsp1286I	GDGCHC	4 cut(s)	600, 957, 1344, 1636
Bsp143I	GATC	9 cut(s)	253, 415, 502, 564, 615, 1086, 1146, 1410, 1437
Bsp1720I	GCTNAGC	1 cut(s)	1523
BspCNI	CTCAG	6 cut(s)	315, 385, 622, 1087, 1221, 1515
BspFNI	CGCG	6 cut(s)	94, 575, 695, 1230, 1379, 1502
BspHI	TCATGA	1 cut(s)	282
BspLI	GGNNCC	5 cut(s)	886, 1386, 1472, 1583, 1634
BspPI	GGATC	4 cut(s)	261, 410, 559, 610
BspT107I	GGYRCC	1 cut(s)	1384
BspTNI	GGTCTC	1 cut(s)	319
BsrFI	RCCGGY	3 cut(s)	624, 740, 991
BsrI	ACTGG	6 cut(s)	158, 275, 718, 931, 1528, 1549
BssAI	RCCGGY	3 cut(s)	624, 740, 991
BssECI	CCNNGG	8 cut(s)	453, 522, 573, 693, 922, 1478, 1515, 1635
BssMI	GATC	9 cut(s)	253, 415, 502, 564, 615, 1086, 1146, 1410, 1437
BssNI	GRCGYC	2 cut(s)	201, 1313
Bst2UI	CCWGG	5 cut(s)	605, 772, 860, 1571, 1637
Bst4CI	ACNGT	1 cut(s)	581
BstACI	GRCGYC	2 cut(s)	201, 1313
BstBAI	YACGTR	1 cut(s)	1588
BstC8I	GCNNGC	8 cut(s)	299, 368, 690, 957, 1043, 1296, 1602, 1622
BstDEI	CTNAG	6 cut(s)	323, 372, 609, 1074, 1208, 1523
BstDSI	CCRYGG	4 cut(s)	573, 693, 1478, 1515
BstENI	CCTNNNNNAGG	1 cut(s)	608
BstF5I	GGATG	2 cut(s)	400, 894
BstFNI	CGCG	6 cut(s)	94, 575, 695, 1230, 1379, 1502
BstH2I	RGCGCY	1 cut(s)	878
BstHHI	GCGC	6 cut(s)	96, 877, 1002, 1203, 1232, 1502
BstKTI	GATC	9 cut(s)	256, 418, 505, 567, 618, 1089, 1149, 1413, 1440
BstMAI	GTCTC	3 cut(s)	282, 319, 1409
BstMBI	GATC	9 cut(s)	253, 415, 502, 564, 615, 1086, 1146, 1410, 1437
BstMCI	CGRYCG	3 cut(s)	168, 625, 1218
BstNI	CCWGG	5 cut(s)	605, 772, 860, 1571, 1637
BstSCI	CCNGG	9 cut(s)	387, 452, 603, 770, 858, 1337, 1387, 1569, 1635
BstSLI	GKGCMC	1 cut(s)	1636
BstUI	CGCG	6 cut(s)	94, 575, 695, 1230, 1379, 1502
BstV1I	GCAGC	3 cut(s)	984, 1432, 1469
BstX2I	RGATCY	1 cut(s)	253
BstXI	CCANNNNNNTGG	2 cut(s)	160, 427
BstYI	RGATCY	1 cut(s)	253
BstZI	CGGCCG	2 cut(s)	165, 1215
BtgI	CCRYGG	4 cut(s)	573, 693, 1478, 1515
BtrI	CACGTC	3 cut(s)	901, 973, 1647
BtsCI	GGATG	2 cut(s)	400, 894
BtsIMutI	CAGTG	2 cut(s)	165, 1556
Cac8I	GCNNGC	8 cut(s)	299, 368, 690, 957, 1043, 1296, 1602, 1622
CciI	TCATGA	1 cut(s)	282
CfoI	GCGC	6 cut(s)	96, 877, 1002, 1203, 1232, 1502
Cfr10I	RCCGGY	3 cut(s)	624, 740, 991
Cfr13I	GGNCC	9 cut(s)	430, 862, 981, 1471, 1512, 1546, 1567, 1632, 1633
Cfr42I	CCGCGG	2 cut(s)	576, 696
CseI	GACGC	2 cut(s)	719, 1385
Csp6I	GTAC	5 cut(s)	8, 394, 934, 1027, 1192
CspAI	ACCGGT	1 cut(s)	740
CviAII	CATG	6 cut(s)	224, 283, 1156, 1198, 1625, 1653
CviQI	GTAC	5 cut(s)	8, 394, 934, 1027, 1192
DdeI	CTNAG	6 cut(s)	323, 372, 609, 1074, 1208, 1523
DpnI	GATC	9 cut(s)	255, 417, 504, 566, 617, 1088, 1148, 1412, 1439
DpnII	GATC	9 cut(s)	253, 415, 502, 564, 615, 1086, 1146, 1410, 1437
DrdI	GACNNNNNNGTC	1 cut(s)	311
DseDI	GACNNNNNNGTC	1 cut(s)	311
EaeI	YGGCCR	5 cut(s)	165, 928, 1215, 1296, 1641
EagI	CGGCCG	2 cut(s)	165, 1215
EciI	GGCGGA	2 cut(s)	131, 1619
Ecl136II	GAGCTC	2 cut(s)	598, 955
EclXI	CGGCCG	2 cut(s)	165, 1215
Eco24I	GRGCYC	4 cut(s)	600, 957, 1344, 1636
Eco31I	GGTCTC	1 cut(s)	319
Eco47I	GGWCC	4 cut(s)	430, 981, 1471, 1567
Eco47III	AGCGCT	1 cut(s)	876
Eco52I	CGGCCG	2 cut(s)	165, 1215
Eco53kI	GAGCTC	2 cut(s)	598, 955
Eco72I	CACGTG	1 cut(s)	1588
Eco88I	CYCGRG	2 cut(s)	233, 1343
EcoICRI	GAGCTC	2 cut(s)	598, 955
EcoNI	CCTNNNNNAGG	1 cut(s)	608
EcoO109I	RGGNCCY	3 cut(s)	862, 1632, 1633
EcoRI	GAATTC	1 cut(s)	1103
EcoRII	CCWGG	5 cut(s)	603, 770, 858, 1569, 1635
EcoT38I	GRGCYC	4 cut(s)	600, 957, 1344, 1636
Esp3I	CGTCTC	1 cut(s)	1409
FaeI	CATG	6 cut(s)	227, 286, 1159, 1201, 1628, 1656
FaiI	YATR	8 cut(s)	225, 284, 499, 501, 1157, 1199, 1626, 1654
FaqI	GGGAC	2 cut(s)	287, 706
FatI	CATG	6 cut(s)	223, 282, 1155, 1197, 1624, 1652
FauI	CCCGC	5 cut(s)	996, 1453, 1461, 1476, 1495
FauNDI	CATATG	1 cut(s)	499
FbaI	TGATCA	1 cut(s)	502
FblI	GTMKAC	3 cut(s)	243, 459, 1281
FokI	GGATG	2 cut(s)	387, 881
FriOI	GRGCYC	4 cut(s)	600, 957, 1344, 1636
FspI	TGCGCA	1 cut(s)	1001
GlaI	GCGC	6 cut(s)	95, 876, 1001, 1202, 1231, 1501
GsaI	CCCAGC	2 cut(s)	156, 427
GsuI	CTGGAG	3 cut(s)	668, 701, 871
HaeII	RGCGCY	1 cut(s)	878
HapII	CCGG	9 cut(s)	389, 453, 625, 741, 752, 992, 1019, 1338, 1388
HgaI	GACGC	2 cut(s)	719, 1385
HhaI	GCGC	6 cut(s)	96, 877, 1002, 1203, 1232, 1502
Hin1I	GRCGYC	2 cut(s)	201, 1313
Hin1II	CATG	6 cut(s)	227, 286, 1159, 1201, 1628, 1656
Hin6I	GCGC	6 cut(s)	94, 875, 1000, 1201, 1230, 1500
HinP1I	GCGC	6 cut(s)	94, 875, 1000, 1201, 1230, 1500
HincII	GTYRAC	2 cut(s)	244, 1282
HindII	GTYRAC	2 cut(s)	244, 1282
HpaII	CCGG	9 cut(s)	389, 453, 625, 741, 752, 992, 1019, 1338, 1388
HphI	GGTGA	6 cut(s)	212, 538, 625, 997, 1060, 1414
Hpy166II	GTNNAC	5 cut(s)	244, 433, 460, 529, 1282
Hpy8I	GTNNAC	5 cut(s)	244, 433, 460, 529, 1282
HpyAV	CCTTC	5 cut(s)	99, 504, 1118, 1132, 1147
HpyCH4III	ACNGT	1 cut(s)	581
HpyCH4V	TGCA	1 cut(s)	301
HpyF3I	CTNAG	6 cut(s)	323, 372, 609, 1074, 1208, 1523
Hsp92I	GRCGYC	2 cut(s)	201, 1313
Hsp92II	CATG	6 cut(s)	227, 286, 1159, 1201, 1628, 1656
HspAI	GCGC	6 cut(s)	94, 875, 1000, 1201, 1230, 1500
Ksp22I	TGATCA	1 cut(s)	502
KspI	CCGCGG	2 cut(s)	576, 696
Kzo9I	GATC	9 cut(s)	253, 415, 502, 564, 615, 1086, 1146, 1410, 1437
LmnI	GCTCC	5 cut(s)	559, 890, 1307, 1519, 1606
Lsp1109I	GCAGC	3 cut(s)	984, 1432, 1469
LweI	GCATC	2 cut(s)	105, 1011
MaeIII	GTNAC	1 cut(s)	13
MalI	GATC	9 cut(s)	255, 417, 504, 566, 617, 1088, 1148, 1412, 1439
MboI	GATC	9 cut(s)	253, 415, 502, 564, 615, 1086, 1146, 1410, 1437
MboII	GAAGA	4 cut(s)	248, 1342, 1420, 1447
MflI	RGATCY	1 cut(s)	253
MhlI	GDGCHC	4 cut(s)	600, 957, 1344, 1636
MlsI	TGGCCA	1 cut(s)	1643
MluCI	AATT	3 cut(s)	472, 780, 1103
MluNI	TGGCCA	1 cut(s)	1643
MlyI	GAGTC	6 cut(s)	202, 269, 302, 581, 1310, 1376
MmeI	TCCRAC	4 cut(s)	222, 462, 558, 1008
Mox20I	TGGCCA	1 cut(s)	1643
MroXI	GAANNNNTTC	2 cut(s)	1107, 1491
MscI	TGGCCA	1 cut(s)	1643
MseI	TTAA	1 cut(s)	318
MslI	CAYNNNNRTG	1 cut(s)	1657
Msp20I	TGGCCA	1 cut(s)	1643
MspA1I	CMGCKG	5 cut(s)	346, 427, 575, 695, 1460
MspI	CCGG	9 cut(s)	389, 453, 625, 741, 752, 992, 1019, 1338, 1388
MspR9I	CCNGG	9 cut(s)	389, 454, 605, 772, 860, 1339, 1389, 1571, 1637
MvaI	CCWGG	5 cut(s)	605, 772, 860, 1571, 1637
MvnI	CGCG	6 cut(s)	94, 575, 695, 1230, 1379, 1502
NciI	CCSGG	4 cut(s)	389, 454, 1339, 1389
NdeI	CATATG	1 cut(s)	499
NdeII	GATC	9 cut(s)	253, 415, 502, 564, 615, 1086, 1146, 1410, 1437
NlaIII	CATG	6 cut(s)	227, 286, 1159, 1201, 1628, 1656
NlaIV	GGNNCC	5 cut(s)	886, 1386, 1472, 1583, 1634
NmeAIII	GCCGAG	7 cut(s)	903, 985, 1193, 1218, 1243, 1287, 1324
NsbI	TGCGCA	1 cut(s)	1001
PaeR7I	CTCGAG	2 cut(s)	233, 1343
PagI	TCATGA	1 cut(s)	282
PcsI	WCGNNNNNNNCGW	7 cut(s)	240, 543, 552, 591, 830, 1284, 1310
PdmI	GAANNNNTTC	2 cut(s)	1107, 1491
PfeI	GAWTC	6 cut(s)	78, 217, 376, 1092, 1129, 1177
PflFI	GACNNNGTC	1 cut(s)	311
PfoI	TCCNGGA	1 cut(s)	387
PinAI	ACCGGT	1 cut(s)	740
PleI	GAGTC	6 cut(s)	202, 269, 302, 581, 1309, 1375
PmaCI	CACGTG	1 cut(s)	1588
PmlI	CACGTG	1 cut(s)	1588
PpsI	GAGTC	6 cut(s)	202, 269, 302, 581, 1309, 1375
Ppu21I	YACGTR	1 cut(s)	1588
Psp124BI	GAGCTC	2 cut(s)	600, 957
Psp6I	CCWGG	5 cut(s)	603, 770, 858, 1569, 1635
PspCI	CACGTG	1 cut(s)	1588
PspFI	CCCAGC	2 cut(s)	152, 423
PspGI	CCWGG	5 cut(s)	603, 770, 858, 1569, 1635
PspN4I	GGNNCC	5 cut(s)	886, 1386, 1472, 1583, 1634
PspOMI	GGGCCC	1 cut(s)	1632
PspPI	GGNCC	9 cut(s)	430, 862, 981, 1471, 1512, 1546, 1567, 1632, 1633
PspXI	VCTCGAGB	1 cut(s)	1343
PsuI	RGATCY	1 cut(s)	253
PsyI	GACNNNGTC	1 cut(s)	311
PvuII	CAGCTG	2 cut(s)	346, 427
RsaI	GTAC	5 cut(s)	9, 395, 935, 1028, 1193
RsaNI	GTAC	5 cut(s)	8, 394, 934, 1027, 1192
RseI	CAYNNNNRTG	1 cut(s)	1657
SacI	GAGCTC	2 cut(s)	600, 957
SacII	CCGCGG	2 cut(s)	576, 696
SalI	GTCGAC	2 cut(s)	242, 1280
SaqAI	TTAA	1 cut(s)	318
Sau3AI	GATC	9 cut(s)	253, 415, 502, 564, 615, 1086, 1146, 1410, 1437
Sau96I	GGNCC	9 cut(s)	430, 862, 981, 1471, 1512, 1546, 1567, 1632, 1633
SchI	GAGTC	6 cut(s)	202, 269, 302, 581, 1310, 1376
ScrFI	CCNGG	9 cut(s)	389, 454, 605, 772, 860, 1339, 1389, 1571, 1637
SduI	GDGCHC	4 cut(s)	600, 957, 1344, 1636
SfaNI	GCATC	2 cut(s)	105, 1011
SfiI	GGCCNNNNNGGCC	2 cut(s)	927, 1640
Sfr274I	CTCGAG	2 cut(s)	233, 1343
Sfr303I	CCGCGG	2 cut(s)	576, 696
SgrAI	CRCCGGYG	1 cut(s)	991
SgrBI	CCGCGG	2 cut(s)	576, 696
SgrDI	CGTCGACG	1 cut(s)	1280
SinI	GGWCC	4 cut(s)	430, 981, 1471, 1567
SlaI	CTCGAG	2 cut(s)	233, 1343
SmiMI	CAYNNNNRTG	1 cut(s)	1657
SmlI	CTYRAG	3 cut(s)	233, 1082, 1343
SmoI	CTYRAG	3 cut(s)	233, 1082, 1343
Sse9I	AATT	3 cut(s)	472, 780, 1103
SstI	GAGCTC	2 cut(s)	600, 957
StyD4I	CCNGG	9 cut(s)	387, 452, 603, 770, 858, 1337, 1387, 1569, 1635
TaaI	ACNGT	1 cut(s)	581
TaqII	GACCGA	1 cut(s)	524
TasI	AATT	3 cut(s)	472, 780, 1103
TauI	GCSGC	7 cut(s)	167, 575, 695, 930, 1206, 1382, 1600
TfiI	GAWTC	6 cut(s)	78, 217, 376, 1092, 1129, 1177
Tru1I	TTAA	1 cut(s)	318
Tru9I	TTAA	1 cut(s)	318
TscAI	CASTG	2 cut(s)	165, 1556
TseI	GCWGC	3 cut(s)	997, 1445, 1457
TspDTI	ATGAA	6 cut(s)	486, 506, 541, 883, 962, 1144
TspGWI	ACGGA	2 cut(s)	118, 1176
TspRI	CASTG	2 cut(s)	165, 1556
Tth111I	GACNNNGTC	1 cut(s)	311
VpaK11BI	GGWCC	4 cut(s)	430, 981, 1471, 1567
XagI	CCTNNNNNAGG	1 cut(s)	608
XapI	RAATTY	2 cut(s)	472, 1103
XhoI	CTCGAG	2 cut(s)	233, 1343
XmiI	GTMKAC	3 cut(s)	243, 459, 1281
XmnI	GAANNNNTTC	2 cut(s)	1107, 1491
ZraI	GACGTC	2 cut(s)	202, 1314

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.