Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0001360

Physical Location & Seq

Genomic Coordinates Reverse (-)

52211523 .. 52214984

Gene Structure 3462 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG292200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGATTCTTTCCAACCCATTCTTTCTGCTAGTGTTGGCGGTCTGTATATTCGTGGCGGTTCGTGTGCTTCTGTACAAAACAGGGTTGGTTTATATTGTGAAGAAATGGTGGCGGGCGGTGGAGGACTGCTTCCATGTCTACCAGTCGTTCAAAGTCCCGGAATTCAACGAAAGTATGCAGGAGAATCAGCTCTACTGCAAGGTCACTGTTTATCTCAACTCATTGACCTCCATTGAGGACTCCGATTTCACCAATCTCGTCACCGGAAAAAAGCCCAACGAGATCGTGCTCCAGCTCGACCCCAACCAGACCATCGAAGACGACTTTCTCGGGGCCAAGGTCACGTGGCAAAGCGAAGCCAGCAAGGGTGGTTCCAATAATTGCCGCCGGAATTTGGTGTTGAAGGTTCGGAAAGCCGATAAGCGGCGGATTCTGCGGCCCTATTTGCAGCACATCCACGTCGTCGCCGACGAGCTGGACCAGCGGAAGCGAGATTTGCGGCTGTACATGAACGTGGACGACGACTCCGCCACGGCCGGCGACGACTTCCGCAACGCGCGGTGGAGGGCCGTGCCGTTCACGCACCCATCTACGCTGGAGACGATTGCCATGGAAGCCGACCTCAAATCGAAGATCAAGTCCGATTTGGAGTCGTTTCTCAAAGCCAAGCAGTACTACAACCGACTCGGCCGCGTCTGGAAGCGAAGCTTCTTGCTTTACGGCCCCTCCGGCACCGGGAAATCCAGCTTCGTCGCCGCCATGGCCAATTTCCTCGGCTACGACGTCTACGATCTCGACCTCTCTAGGGTTAGAGACGACTCGGAGTTGAAGATGCTTCTTTTACAGACCACGAGCAAGTCGGTGATCCTCATCGAGGACCTGGATCGGTTCTTCGCCGAGAAATCGACGGCCGTCAGCTTCTCCGGCATATCGAACTTCATGGATGGCTTGCTCAACTCGTGCTGCGCCGAAGAGAGAGTCATGGTGTTCACGATGAACTCGAAGGACCAGGTCGACCCGAATTTCCTCCGACCGGGTCGGATCGACGTCCACATCCATTTTCCGCTGTGTGATTTCACGGCGTTTCGGAACCTAGCGACGAGCTATTTGGGGGTGAAGGAGCACAAGTTGTTCCCCCAGGTGGAGGAGATTTTCCAATCCGGGTCGAGTTTGAGCCCGGCCGAGATCGGCGAGCTCATGATCGCGAACCGGAACTCGCCGAGCCGGGCGATCAAGTCGGTCATCACGGCGTTGCAAACCGACGGTGATGGGAGGGGGGCGGGGAAGATCGGACGGCCGCCGAGGTGGTTCGAAAGCGGGTCGAGAAAGTCCGGGGGGGACGAGTCGGGCGAACCCGGAGTTGTGTTATGTGGGGAAGGTGTGAATACGGTGAGGGATTTTAGAAAGCTTTACGGGTTTTTGAGGATGAGAGGCAGCAAGAATTCTCAGTCGTTCGATGCGGGGTCGGATCGGTCGGCGGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006996 GO:0007005 GO:0008150 GO:0009987 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017004 GO:0017062 GO:0017111 GO:0019866 GO:0022607 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0033108 GO:0034551 GO:0034622 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0065003 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

494

Amino Acids

55.72

Weight (kDa)

8.6

Isoelectric Point (pI)

44.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	31 - 118	1.2e-13	Domain associated at C-terminal with AAA
AAA	PF00004	238 - 356	1.5e-16	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	357 - 420	3.2e-11	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001360)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46620
fragaria_vesca	FvH4_7g17220 FvH4_7g32500
malus_domestica	MD01G1085900.v1.1 MD01G1225700.v1.1 MD02G1229200.v1.1 MD07G1155000.v1.1 MD07G1296200.v1.1
prunus_persica	Prupe.2G193700_v2.0.a1 Prupe.2G315800_v2.0.a1
pyrus_communis	pycom01g23420 pycom07g15210 pycom07g26900
rosa_chinensis	RchiOBHm_Chr1g0360611 RchiOBHm_Chr1g0382341 RchiOBHm_Chr2g0086831 RchiOBHm_Chr2g0139501 RchiOBHm_Chr3g0458211 RchiOBHm_Chr3g0478421 RchiOBHm_Chr4g0427361
rosa_laevigata	RLG00000002572 RLG00000009827 RLG00000026185 RLG00000027795 RLG00000030781
rosa_multiflora	Rmu_sc0000110.1_g000040 Rmu_sc0001436.1_g000033 Rmu_sc0002188.1_g000003 Rmu_sc0002535.1_g000007 Rmu_sc0003020.1_g000016 Rmu_sc0003481.1_g000013 Rmu_sc0004697.1_g000002 Rmu_sc0007558.1_g000001 Rmu_sc0010192.1_g000001 Rmu_sc0015587.1_g000001 Rmu_sc0042341.1_g000002
rosa_roxburghii	Rroxscaffold_2G00093530 Rroxscaffold_4G00278180
rosa_rugosa	Rorug01G0280000 Rorug01G0433500 Rorug02G0149500 Rorug05G0571400
rosa_samantha	Rh1AG292200 Rh1BG257100 Rh1BG414500 Rh1CG274900 Rh1DG287000 Rh1DG446600 Rh5BG487600 Rh5CG511800
rosa_wichuraiana	Rw1G025870 Rw1G041280 Rw5G043520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	786, 1050
AccB1I	GGYRCC	1 cut(s)	731
AccI	GTMKAC	3 cut(s)	138, 786, 1014
AccII	CGCG	4 cut(s)	557, 559, 693, 1205
AclWI	GGATC	4 cut(s)	859, 891, 1049, 1476
AcoI	YGGCCR	6 cut(s)	534, 688, 762, 909, 1179, 1295
AcsI	RAATTY	4 cut(s)	161, 391, 1021, 1441
AcvI	CACGTG	1 cut(s)	345
AcyI	GRCGYC	2 cut(s)	783, 1047
AfaI	GTAC	3 cut(s)	74, 506, 674
AfiI	CCNNNNNNNGG	8 cut(s)	394, 423, 735, 805, 874, 1033, 1141, 1144
AgsI	TTSAA	4 cut(s)	151, 166, 403, 829
AjiI	CACGTC	1 cut(s)	460
AjnI	CCWGG	3 cut(s)	879, 1008, 1137
AluBI	AGCT	9 cut(s)	190, 295, 475, 708, 747, 918, 1104, 1195, 1408
AluI	AGCT	9 cut(s)	190, 295, 475, 708, 747, 918, 1104, 1195, 1408
Alw21I	GWGCWC	3 cut(s)	291, 1125, 1197
Alw26I	GTCTC	2 cut(s)	593, 807
AlwI	GGATC	4 cut(s)	859, 891, 1049, 1476
Ama87I	CYCGRG	1 cut(s)	329
ApeKI	GCWGC	3 cut(s)	448, 963, 1434
ApoI	RAATTY	4 cut(s)	161, 391, 1021, 1441
ArsI	GACNNNNNNTTYG	6 cut(s)	623, 655, 963, 995, 1090, 1122
AspLEI	GCGC	2 cut(s)	559, 968
AspS9I	GGNCC	7 cut(s)	333, 438, 478, 567, 722, 877, 1006
AsuC2I	CCSGG	8 cut(s)	158, 736, 1035, 1162, 1178, 1226, 1333, 1356
AsuHPI	GGTGA	6 cut(s)	241, 253, 874, 1126, 1277, 1402
AsuII	TTCGAA	1 cut(s)	1311
AvaI	CYCGRG	1 cut(s)	329
AvaII	GGWCC	3 cut(s)	478, 877, 1006
BalI	TGGCCA	1 cut(s)	764
BanI	GGYRCC	1 cut(s)	731
BanII	GRGCYC	2 cut(s)	1178, 1197
BauI	CACGAG	2 cut(s)	850, 958
BbrPI	CACGTG	1 cut(s)	345
BbsI	GAAGAC	1 cut(s)	324
Bbv12I	GWGCWC	3 cut(s)	291, 1125, 1197
BbvI	GCAGC	3 cut(s)	460, 950, 1446
BccI	CCATC	4 cut(s)	320, 595, 938, 1262
BceAI	ACGGC	9 cut(s)	549, 554, 559, 736, 896, 924, 1095, 1263, 1310
BciT130I	CCWGG	3 cut(s)	881, 1010, 1139
BcnI	CCSGG	8 cut(s)	158, 736, 1035, 1162, 1178, 1226, 1333, 1356
BcoDI	GTCTC	2 cut(s)	593, 807
BfaI	CTAG	3 cut(s)	29, 804, 1094
BglI	GCCNNNNNGGC	2 cut(s)	729, 761
BmcAI	AGTACT	1 cut(s)	674
Bme18I	GGWCC	3 cut(s)	478, 877, 1006
BmeT110I	CYCGRG	1 cut(s)	329
BmgBI	CACGTC	1 cut(s)	460
BmgT120I	GGNCC	7 cut(s)	333, 438, 478, 567, 722, 877, 1006
BmiI	GGNNCC	5 cut(s)	334, 373, 724, 733, 1091
BmsI	GCATC	2 cut(s)	822, 1447
BoxI	GACNNNNGTC	1 cut(s)	911
BpiI	GAAGAC	1 cut(s)	324
BpmI	CTGGAG	2 cut(s)	275, 617
Bpu14I	TTCGAA	1 cut(s)	1311
BpuMI	CCSGG	8 cut(s)	158, 736, 1035, 1162, 1178, 1226, 1333, 1356
BsaAI	YACGTR	1 cut(s)	345
BsaBI	GATNNNNATC	1 cut(s)	869
BsaHI	GRCGYC	2 cut(s)	783, 1047
BsaJI	CCNNGG	8 cut(s)	336, 531, 609, 759, 772, 1137, 1301, 1332
BsaWI	WCCGGW	2 cut(s)	263, 1209
BsaXI	ACNNNNNCTCC	6 cut(s)	509, 539, 710, 740, 1112, 1142
Bsc4I	CCNNNNNNNGG	8 cut(s)	394, 423, 735, 805, 874, 1033, 1141, 1144
Bse118I	RCCGGY	1 cut(s)	536
Bse1I	ACTGG	1 cut(s)	142
Bse8I	GATNNNNATC	1 cut(s)	869
BseBI	CCWGG	3 cut(s)	881, 1010, 1139
BseDI	CCNNGG	8 cut(s)	336, 531, 609, 759, 772, 1137, 1301, 1332
BseGI	GGATG	4 cut(s)	453, 949, 1053, 1431
BseJI	GATNNNNATC	1 cut(s)	869
BseLI	CCNNNNNNNGG	8 cut(s)	394, 423, 735, 805, 874, 1033, 1141, 1144
BseMII	CTCAG	1 cut(s)	1460
BseNI	ACTGG	1 cut(s)	142
BseRI	GAGGAG	1 cut(s)	1160
BseX3I	CGGCCG	5 cut(s)	534, 688, 909, 1179, 1295
BseXI	GCAGC	3 cut(s)	460, 950, 1446
Bsh1236I	CGCG	4 cut(s)	557, 559, 693, 1205
Bsh1285I	CGRYCG	7 cut(s)	537, 691, 912, 1034, 1182, 1298, 1475
BshNI	GGYRCC	1 cut(s)	731
BsiEI	CGRYCG	7 cut(s)	537, 691, 912, 1034, 1182, 1298, 1475
BsiHKAI	GWGCWC	3 cut(s)	291, 1125, 1197
BsiHKCI	CYCGRG	1 cut(s)	329
BslFI	GGGAC	2 cut(s)	140, 1352
BslI	CCNNNNNNNGG	8 cut(s)	394, 423, 735, 805, 874, 1033, 1141, 1144
BsmAI	GTCTC	2 cut(s)	593, 807
BsmBI	CGTCTC	2 cut(s)	593, 807
BsmFI	GGGAC	2 cut(s)	140, 1352
BsoBI	CYCGRG	1 cut(s)	329
Bsp119I	TTCGAA	1 cut(s)	1311
Bsp1286I	GDGCHC	4 cut(s)	291, 1125, 1178, 1197
Bsp1407I	TGTACA	2 cut(s)	72, 504
Bsp19I	CCATGG	2 cut(s)	609, 759
Bsp68I	TCGCGA	1 cut(s)	1205
BspCNI	CTCAG	1 cut(s)	1459
BspFNI	CGCG	4 cut(s)	557, 559, 693, 1205
BspHI	TCATGA	1 cut(s)	1197
BspLI	GGNNCC	5 cut(s)	334, 373, 724, 733, 1091
BspPI	GGATC	4 cut(s)	859, 891, 1049, 1476
BspT104I	TTCGAA	1 cut(s)	1311
BspT107I	GGYRCC	1 cut(s)	731
BsrFI	RCCGGY	1 cut(s)	536
BsrGI	TGTACA	2 cut(s)	72, 504
BsrI	ACTGG	1 cut(s)	142
BssAI	RCCGGY	1 cut(s)	536
BssECI	CCNNGG	8 cut(s)	336, 531, 609, 759, 772, 1137, 1301, 1332
BssNI	GRCGYC	2 cut(s)	783, 1047
BssSI	CACGAG	2 cut(s)	850, 958
BssT1I	CCWWGG	3 cut(s)	336, 609, 759
Bst2BI	CACGAG	2 cut(s)	850, 958
Bst2UI	CCWGG	3 cut(s)	881, 1010, 1139
Bst4CI	ACNGT	3 cut(s)	208, 1265, 1390
Bst6I	CTCTTC	1 cut(s)	966
BstACI	GRCGYC	2 cut(s)	783, 1047
BstAUI	TGTACA	2 cut(s)	72, 504
BstBAI	YACGTR	1 cut(s)	345
BstBI	TTCGAA	1 cut(s)	1311
BstC8I	GCNNGC	6 cut(s)	114, 361, 538, 950, 1193, 1480
BstDEI	CTNAG	1 cut(s)	1446
BstDSI	CCRYGG	3 cut(s)	531, 609, 759
BstENI	CCTNNNNNAGG	1 cut(s)	872
BstF5I	GGATG	4 cut(s)	453, 949, 1053, 1431
BstFNI	CGCG	4 cut(s)	557, 559, 693, 1205
BstHHI	GCGC	2 cut(s)	559, 968
BstMAI	GTCTC	2 cut(s)	593, 807
BstMCI	CGRYCG	7 cut(s)	537, 691, 912, 1034, 1182, 1298, 1475
BstNI	CCWGG	3 cut(s)	881, 1010, 1139
BstPAI	GACNNNNGTC	1 cut(s)	911
BstUI	CGCG	4 cut(s)	557, 559, 693, 1205
BstV1I	GCAGC	3 cut(s)	460, 950, 1446
BstV2I	GAAGAC	1 cut(s)	324
BstZI	CGGCCG	5 cut(s)	534, 688, 909, 1179, 1295
BtgI	CCRYGG	3 cut(s)	531, 609, 759
BtrI	CACGTC	1 cut(s)	460
BtsCI	GGATG	4 cut(s)	453, 949, 1053, 1431
BtsIMutI	CAGTG	1 cut(s)	204
BtuMI	TCGCGA	1 cut(s)	1205
Cac8I	GCNNGC	6 cut(s)	114, 361, 538, 950, 1193, 1480
CciI	TCATGA	1 cut(s)	1197
CfoI	GCGC	2 cut(s)	559, 968
Cfr10I	RCCGGY	1 cut(s)	536
Cfr13I	GGNCC	7 cut(s)	333, 438, 478, 567, 722, 877, 1006
CseI	GACGC	1 cut(s)	682
CsiI	ACCWGGT	1 cut(s)	1008
Csp6I	GTAC	3 cut(s)	73, 505, 673
CviAII	CATG	7 cut(s)	134, 508, 610, 760, 940, 982, 1198
CviQI	GTAC	3 cut(s)	73, 505, 673
DdeI	CTNAG	1 cut(s)	1446
EaeI	YGGCCR	6 cut(s)	534, 688, 762, 909, 1179, 1295
EagI	CGGCCG	5 cut(s)	534, 688, 909, 1179, 1295
Eam1104I	CTCTTC	1 cut(s)	966
EarI	CTCTTC	1 cut(s)	966
EciI	GGCGGA	2 cut(s)	442, 517
Ecl136II	GAGCTC	1 cut(s)	1195
EclXI	CGGCCG	5 cut(s)	534, 688, 909, 1179, 1295
Eco130I	CCWWGG	3 cut(s)	336, 609, 759
Eco24I	GRGCYC	2 cut(s)	1178, 1197
Eco47I	GGWCC	3 cut(s)	478, 877, 1006
Eco52I	CGGCCG	5 cut(s)	534, 688, 909, 1179, 1295
Eco53kI	GAGCTC	1 cut(s)	1195
Eco72I	CACGTG	1 cut(s)	345
Eco88I	CYCGRG	1 cut(s)	329
EcoICRI	GAGCTC	1 cut(s)	1195
EcoNI	CCTNNNNNAGG	1 cut(s)	872
EcoO109I	RGGNCCY	1 cut(s)	877
EcoRI	GAATTC	2 cut(s)	161, 1441
EcoRII	CCWGG	3 cut(s)	879, 1008, 1137
EcoT14I	CCWWGG	3 cut(s)	336, 609, 759
EcoT38I	GRGCYC	2 cut(s)	1178, 1197
ErhI	CCWWGG	3 cut(s)	336, 609, 759
Esp3I	CGTCTC	2 cut(s)	593, 807
FaeI	CATG	7 cut(s)	137, 511, 613, 763, 943, 985, 1201
FalI	AAGNNNNNCTT	2 cut(s)	692, 724
FaqI	GGGAC	2 cut(s)	140, 1352
FatI	CATG	7 cut(s)	133, 507, 609, 759, 939, 981, 1197
FauI	CCCGC	5 cut(s)	105, 1273, 1310, 1453, 1471
FblI	GTMKAC	3 cut(s)	138, 786, 1014
FokI	GGATG	4 cut(s)	440, 956, 1040, 1438
FriOI	GRGCYC	2 cut(s)	1178, 1197
FspBI	CTAG	3 cut(s)	29, 804, 1094
GlaI	GCGC	2 cut(s)	558, 967
GsuI	CTGGAG	2 cut(s)	275, 617
HgaI	GACGC	1 cut(s)	682
HhaI	GCGC	2 cut(s)	559, 968
Hin1I	GRCGYC	2 cut(s)	783, 1047
Hin1II	CATG	7 cut(s)	137, 511, 613, 763, 943, 985, 1201
Hin6I	GCGC	2 cut(s)	557, 966
HinP1I	GCGC	2 cut(s)	557, 966
HincII	GTYRAC	1 cut(s)	1015
HindII	GTYRAC	1 cut(s)	1015
HindIII	AAGCTT	2 cut(s)	706, 1406
HphI	GGTGA	6 cut(s)	241, 253, 874, 1126, 1277, 1402
Hpy166II	GTNNAC	7 cut(s)	139, 517, 579, 787, 990, 1015, 1051
Hpy188I	TCNGA	9 cut(s)	244, 411, 643, 823, 1031, 1041, 1089, 1292, 1468
Hpy188III	TCNNGA	6 cut(s)	697, 794, 991, 1198, 1204, 1323
Hpy8I	GTNNAC	7 cut(s)	139, 517, 579, 787, 990, 1015, 1051
HpyAV	CCTTC	4 cut(s)	397, 997, 1111, 1370
HpyCH4III	ACNGT	3 cut(s)	208, 1265, 1390
HpyCH4IV	ACGT	5 cut(s)	344, 459, 513, 783, 1047
HpyCH4V	TGCA	4 cut(s)	178, 198, 448, 1255
HpyF3I	CTNAG	1 cut(s)	1446
HpySE526I	ACGT	5 cut(s)	344, 459, 513, 783, 1047
Hsp92I	GRCGYC	2 cut(s)	783, 1047
Hsp92II	CATG	7 cut(s)	137, 511, 613, 763, 943, 985, 1201
HspAI	GCGC	2 cut(s)	557, 966
KroI	GCCGGC	1 cut(s)	536
KroNI	GCCGGC	1 cut(s)	538
LmnI	GCTCC	2 cut(s)	294, 1120
Lsp1109I	GCAGC	3 cut(s)	460, 950, 1446
LweI	GCATC	2 cut(s)	822, 1447
MabI	ACCWGGT	1 cut(s)	1008
MaeI	CTAG	3 cut(s)	29, 804, 1094
MaeII	ACGT	5 cut(s)	344, 459, 513, 783, 1047
MaeIII	GTNAC	3 cut(s)	202, 259, 340
MboII	GAAGA	7 cut(s)	112, 329, 643, 841, 883, 983, 1297
MhlI	GDGCHC	4 cut(s)	291, 1125, 1178, 1197
MlsI	TGGCCA	1 cut(s)	764
MluCI	AATT	6 cut(s)	161, 379, 391, 766, 1021, 1441
MluNI	TGGCCA	1 cut(s)	764
MlyI	GAGTC	7 cut(s)	233, 518, 659, 678, 812, 987, 1352
MmeI	TCCRAC	4 cut(s)	36, 1019, 1054, 1446
Mox20I	TGGCCA	1 cut(s)	764
MroNI	GCCGGC	1 cut(s)	536
MscI	TGGCCA	1 cut(s)	764
MslI	CAYNNNNRTG	1 cut(s)	512
Msp20I	TGGCCA	1 cut(s)	764
MspA1I	CMGCKG	2 cut(s)	484, 1066
MvaI	CCWGG	3 cut(s)	881, 1010, 1139
MvnI	CGCG	4 cut(s)	557, 559, 693, 1205
NaeI	GCCGGC	1 cut(s)	538
NciI	CCSGG	8 cut(s)	158, 736, 1035, 1162, 1178, 1226, 1333, 1356
NcoI	CCATGG	2 cut(s)	609, 759
NgoMIV	GCCGGC	1 cut(s)	536
NlaIII	CATG	7 cut(s)	137, 511, 613, 763, 943, 985, 1201
NlaIV	GGNNCC	5 cut(s)	334, 373, 724, 733, 1091
NmeAIII	GCCGAG	6 cut(s)	666, 753, 922, 1207, 1245, 1326
NmuCI	GTSAC	3 cut(s)	202, 259, 340
NruI	TCGCGA	1 cut(s)	1205
NspV	TTCGAA	1 cut(s)	1311
PagI	TCATGA	1 cut(s)	1197
PcsI	WCGNNNNNNNCGW	8 cut(s)	465, 468, 519, 599, 780, 786, 998, 1347
PdiI	GCCGGC	1 cut(s)	538
PfeI	GAWTC	3 cut(s)	4, 184, 430
PflFI	GACNNNGTC	2 cut(s)	1010, 1035
PfoI	TCCNGGA	1 cut(s)	156
PleI	GAGTC	7 cut(s)	233, 518, 658, 678, 812, 986, 1351
PmaCI	CACGTG	1 cut(s)	345
PmlI	CACGTG	1 cut(s)	345
PpsI	GAGTC	7 cut(s)	233, 518, 658, 678, 812, 986, 1351
Ppu21I	YACGTR	1 cut(s)	345
PpuMI	RGGWCCY	1 cut(s)	877
PshAI	GACNNNNGTC	1 cut(s)	911
Psp124BI	GAGCTC	1 cut(s)	1197
Psp5II	RGGWCCY	1 cut(s)	877
Psp6I	CCWGG	3 cut(s)	879, 1008, 1137
PspCI	CACGTG	1 cut(s)	345
PspGI	CCWGG	3 cut(s)	879, 1008, 1137
PspN4I	GGNNCC	5 cut(s)	334, 373, 724, 733, 1091
PspPI	GGNCC	7 cut(s)	333, 438, 478, 567, 722, 877, 1006
PspPPI	RGGWCCY	1 cut(s)	877
PsyI	GACNNNGTC	2 cut(s)	1010, 1035
RruI	TCGCGA	1 cut(s)	1205
RsaI	GTAC	3 cut(s)	74, 506, 674
RsaNI	GTAC	3 cut(s)	73, 505, 673
RseI	CAYNNNNRTG	1 cut(s)	512
SacI	GAGCTC	1 cut(s)	1197
SalI	GTCGAC	1 cut(s)	1013
Sau96I	GGNCC	7 cut(s)	333, 438, 478, 567, 722, 877, 1006
ScaI	AGTACT	1 cut(s)	674
SchI	GAGTC	7 cut(s)	233, 518, 659, 678, 812, 987, 1352
SduI	GDGCHC	4 cut(s)	291, 1125, 1178, 1197
SexAI	ACCWGGT	1 cut(s)	1008
SfaNI	GCATC	2 cut(s)	822, 1447
SfuI	TTCGAA	1 cut(s)	1311
SinI	GGWCC	3 cut(s)	478, 877, 1006
SmiMI	CAYNNNNRTG	1 cut(s)	512
Sse9I	AATT	6 cut(s)	161, 379, 391, 766, 1021, 1441
SspMI	CTAG	3 cut(s)	29, 804, 1094
SstI	GAGCTC	1 cut(s)	1197
StyI	CCWWGG	3 cut(s)	336, 609, 759
TaaI	ACNGT	3 cut(s)	208, 1265, 1390
TaiI	ACGT	5 cut(s)	347, 462, 516, 786, 1050
TaqII	GACCGA	2 cut(s)	1228, 1461
TasI	AATT	6 cut(s)	161, 379, 391, 766, 1021, 1441
TatI	WGTACW	3 cut(s)	72, 504, 672
TauI	GCSGC	7 cut(s)	387, 427, 439, 502, 693, 758, 1300
TfiI	GAWTC	3 cut(s)	4, 184, 430
TscAI	CASTG	1 cut(s)	211
TseFI	GTSAC	3 cut(s)	202, 259, 340
TseI	GCWGC	3 cut(s)	448, 963, 1434
Tsp45I	GTSAC	3 cut(s)	202, 259, 340
TspDTI	ATGAA	3 cut(s)	524, 928, 1010
TspRI	CASTG	1 cut(s)	211
Tth111I	GACNNNGTC	2 cut(s)	1010, 1035
VpaK11BI	GGWCC	3 cut(s)	478, 877, 1006
XagI	CCTNNNNNAGG	1 cut(s)	872
XapI	RAATTY	4 cut(s)	161, 391, 1021, 1441
XmiI	GTMKAC	3 cut(s)	138, 786, 1014
XspI	CTAG	3 cut(s)	29, 804, 1094
ZraI	GACGTC	2 cut(s)	784, 1048
ZrmI	AGTACT	1 cut(s)	674

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.